HHsearch alignment for GI: 254780810 and conserved domain: PRK05748
>PRK05748 replicative DNA helicase; Provisional.
Probab=94.45 E-value=0.099 Score=30.50 Aligned_cols=60 Identities=22% Similarity=0.244 Sum_probs=43.0
Q ss_pred CCCHHHHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
Q ss_conf 32136888998865-510231222048778789999999999861188646999950878789
Q gi|254780810|r 157 NKDISSRVIDLIAP-IGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEE 218 (423)
Q Consensus 157 p~~~~~~~id~~~p-ig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~e 218 (423)
T Consensus 185 Gi~TG~~~LD~~~~G~~~g~LiviaaRP~mGKTa~alnia~~~a~~~~~~v~~f--SlEM~~~ 245 (448)
T PRK05748 185 GIPTGFRDLDKMTSGLQPNDLIIVAARPSVGKTAFALNIAQNVATKTDKNVAIF--SLEMGAE 245 (448)
T ss_pred EEECCHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEE--ECCCCHH
T ss_conf 105782789998279886737999847998768999999999998569808998--1778888