HHsearch alignment for GI: 254780810 and conserved domain: PRK05922
>PRK05922 type III secretion system ATPase; Validated.
Probab=100.00 E-value=0 Score=560.45 Aligned_cols=352 Identities=19% Similarity=0.148 Sum_probs=310.1
Q ss_pred HHHHHHHCCCEEEEEEE------EE-EECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 99875205874899999------85-404770267504548666655604601000012212598799988624688876
Q gi|254780810|r 41 ILKVLSGRDVEIIGEGV------IE-VLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERY 113 (423)
Q Consensus 41 Il~~~~~~~g~~~~eGv------LE-Il~dGyGFLR~~~~~yl~~~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~ 113 (423)
T Consensus 20 ~GrV~~V~G~~ie~~g~~~~iGelc~I~~~~~~~i~---aeVvgf~~~~~~l~p~~~~~Gi~~G~~V~~~g~~~~v~vg~ 96 (434)
T PRK05922 20 CGLLSRVSGNLLEAQGLSACLGELCQISLPKSPPIL---AEVIGFHNQTTLLMSLSPIHYVALGAEVLPLRRPPSLHLSD 96 (434)
T ss_pred EEEEEEEECEEEEEEECCCCCCCEEEEEECCCCEEE---EEEEEEECCEEEEEECCCCCCCCCCCEEEECCCCCEEECCC
T ss_conf 679999966499998068787985999818998789---99998729979999777766789999999899987677680
Q ss_pred CCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
Q ss_conf 30002222556887885124430002000112234324778653213688899886551023122204877878999999
Q gi|254780810|r 114 FALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQN 193 (423)
Q Consensus 114 ~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ 193 (423)
T Consensus 97 ~lLGRVld~~G~PiDg~~~~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIraID~l~pigrGQR~gIf~g~GvGKt~Ll~~ 176 (434)
T PRK05922 97 HLLGRVLDGFGNPLDGKEQLPKTHLKPLFSPPPSPMSRQPIQEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLST 176 (434)
T ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHH
T ss_conf 61465726884644899999987605245899482221688875547855673567724676777307999978999986
Q ss_pred HHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH-------CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 999986118864699995087878999999840-------3427823667888899999999999999999779928999
Q gi|254780810|r 194 IAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV-------QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVIL 266 (423)
Q Consensus 194 ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~-------~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~ 266 (423)
T Consensus 177 ia~~~~----~~v~V~alIGeR~rEv~efie~~~~~~~~~~tvvv~atsd~p~~~r~~a~~~a~aiAEyfrd~G~~VLl~ 252 (434)
T PRK05922 177 IAKGSK----STINVIALIGERGREVREYIEQHKEGLKAQRTIIIASPAHETAPTKVIAGRAAMTIAEYFRDQGHRVLFI 252 (434)
T ss_pred HHHCCC----CCEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 765367----8759998455138999999998661345210378750377887888999988767999999779967999
Q ss_pred EECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCE
Q ss_conf 81638987762001366777677-75202466504687522577777785001211201267655413889885226607
Q gi|254780810|r 267 LDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSE 345 (423)
Q Consensus 267 ~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~~ar~~~~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~ 345 (423)
T Consensus 253 ~Dsltr~A~A~REisl~~gepP~~~gYp~svf~~l~~L~ERag~~-~~GSITa~~tVl~~-~~-~~dpi~d~~~silDGh 329 (434)
T PRK05922 253 MDSLSRWIAALQEVALARGETLSAHHYAASVFHHVSEFTERAGNN-DKGSITALYAILHY-PN-HPDIFTDYLKSLLDGH 329 (434)
T ss_pred ECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCCCCCEEEEEEEC-CC-CCCCCCCCCHHHEEEE
T ss_conf 547889999998999864899987688944999878888604379-99655649899853-89-8765677333022224
Q ss_pred EEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 8980878847999740533542210155199999999999999961269378999999
Q gi|254780810|r 346 IVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLI 403 (423)
Q Consensus 346 i~L~r~la~~~~~PAId~~~S~sR~~~~l~~~~~~~~~~~~r~~l~~~~~~e~~~~l~ 403 (423)
T Consensus 330 IvLsr~-~~~~~~PAIDvl~S~SR~~~~~~~~~h~~~a~~~r~~la~y~e~~dli~~G 386 (434)
T PRK05922 330 FFLTPQ-GKALASPPIDILTSLSRSARQLALPHHYAAAEELRSLLKAYHEALDIIQLG 386 (434)
T ss_pred EEECHH-HHHCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 675354-661578975656676451423356999999999999999999999999852