HHsearch alignment for GI: 254780810 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=92.31 E-value=0.85 Score=24.38 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=48.4
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCC---EEEEEECCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3122204877878999999999986118864---6999950878789999998403427823667888899999999999
Q gi|254780810|r 175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPEC---YLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHVQVAEMVIA 251 (423)
Q Consensus 175 qr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v---~~i~~ligEr~~ev~e~~~~~~~~vv~st~d~~~~~~~~~a~~a~~ 251 (423)
T Consensus 41 HAYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~-----~---~~~~s~DViEIDAASn~g-VDdIR---eLie 108 (718)
T PRK07133 41 HAYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCI-----E---NFNNNLDIIEMDAASNNG-VDEIR---ELRE 108 (718)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHH-----H---CCCCCCCEEEECCCCCCC-HHHHH---HHHH
T ss_conf 0586238998688999999999967999999999770214-----3---047898737754556688-89999---9999
Q ss_pred HHHHHHHCCCCEEEEEECHHHHH-HHHHCCCCCCCCCC
Q ss_conf 99999977992899981638987-76200136677767
Q gi|254780810|r 252 KAKCLVEYGLDVVILLDSITRLC-RAYNVLMPSSGKIL 288 (423)
Q Consensus 252 ~a~~~~e~G~dVll~~DslTR~A-rA~~~~~~~~g~~~ 288 (423)
T Consensus 109 ~v~y~P~~gkYKVyIIDEvHMLS~~AfNALLKtLEEPP 146 (718)
T PRK07133 109 NVKNLPQISKYKIYIIDEVHMLSKSAFNALLKTLEEPP 146 (718)
T ss_pred HHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 82558877872499996620079999999998502798