HHsearch alignment for GI: 254780810 and conserved domain: PRK08084

>PRK08084 DNA replication initiation factor; Provisional.
Probab=95.59  E-value=0.19  Score=28.71  Aligned_cols=60  Identities=10%  Similarity=0.078  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
Q ss_conf             88899886551023122204877878999999999986118864699995087878999999
Q gi|254780810|r  162 SRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQ  223 (423)
Q Consensus       162 ~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~  223 (423)
T Consensus        33 ~~al~~~~~~~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~~--~~~~yl~~~~~~~~~~~~l   92 (235)
T PRK08084         33 LAALQNVLRQEHSGYIYLWGREGAGRSHLLHAACAELSQRG--DAVGYVPLDKRAWFVPEVL   92 (235)
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC--CCEEEEEHHHHHHHHHHHH
T ss_conf             99999998578987699989999888999999999997079--8579987798665179999