HHsearch alignment for GI: 254780810 and conserved domain: PRK08116

Probab=94.38  E-value=0.12  Score=29.89  Aligned_cols=92  Identities=14%  Similarity=0.179  Sum_probs=54.2

Q ss_pred             CEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEECCCCCCHHHHHHHH
Q ss_conf             0022225568878851244300020001122343247786532136888998865510231-222048778789999999
Q gi|254780810|r  116 LLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQR-SLIVAPPRTGKTILLQNI  194 (423)
Q Consensus       116 L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr-~~i~~~~~~gkt~ll~~i  194 (423)
T Consensus        60 i~rl~~~s~i~~~f~~--~tFeN~~~~~~~---------~~a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aI  128 (262)
T PRK08116         60 LERLISNSLLDEKFRN--STFENWLFRKGS---------EKAYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAI  128 (262)
T ss_pred             HHHHHHHCCCCHHHHH--CCCCCCCCCCCH---------HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             9999986599988981--922255689525---------99999999999989873646861899898999899999999


Q ss_pred             HHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHC
Q ss_conf             999861188646999950878789999998403
Q gi|254780810|r  195 AHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQ  227 (423)
Q Consensus       195 a~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~~  227 (423)
T Consensus       129 a~~l~~~g~--~V~~~-------~~~~ll~~lk  152 (262)
T PRK08116        129 ANELIEKGV--PVVFV-------NVPELLNRIK  152 (262)
T ss_pred             HHHHHHCCC--EEEEE-------EHHHHHHHHH
T ss_conf             999998799--39998-------8999999999