HHsearch alignment for GI: 254780810 and conserved domain: PRK09099
>PRK09099 type III secretion system ATPase; Provisional.
Probab=100.00 E-value=0 Score=606.31 Aligned_cols=364 Identities=22% Similarity=0.217 Sum_probs=322.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEE------EEEECCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCE
Q ss_conf 98857666789999999875205874899999------854047702675045486666556046010000122125987
Q gi|254780810|r 26 IENANVMRKQELMFSILKVLSGRDVEIIGEGV------IEVLQDGFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDT 99 (423)
Q Consensus 26 Ie~~~~l~K~eLI~~Il~~~~~~~g~~~~eGv------LEIl~dGyGFLR~~~~~yl~~~~DiyVs~slir~f~Lr~GD~ 99 (423)
T Consensus 16 l~~~~~~~------~~G~V~~v~g~~i~~~G~~a~iGelc~i~~~~g~~~-~~aEVvgf~~~~~~l~p~~~~~gi~~G~~ 88 (441)
T PRK09099 16 LAALAAVR------RTGKVLEVIGTLLRVSGLDVTLGELCELRQRDGTLL-QRAEVVGFSRDVALLSPFGELGGLSRGTR 88 (441)
T ss_pred HHCCCCCE------EEEEEEEEECCEEEEEECCCCCCCEEEEECCCCCCC-CEEEEEEEECCEEEEEECCCCCCCCCCCE
T ss_conf 50477530------466999997819999817888788699984899711-02589998689899998878667889999
Q ss_pred EEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99988624688876300022225568878851244300020001122343247786532136888998865510231222
Q gi|254780810|r 100 VEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLI 179 (423)
Q Consensus 100 V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i 179 (423)
T Consensus 89 V~~tg~~~~VpvG~~lLGRVvD~lG~PlDg~g~i~~~~~~pi~~~~p~p~~R~~i~epl~TGIraID~l~pigrGQR~gI 168 (441)
T PRK09099 89 VIGLGRPLSVPVGPALLGRVIDGLGEPIDGRGPLDCDTLVPVIAAPPDPMSRRMIEAPLPTGVRIVDGLMTLGEGQRMGI 168 (441)
T ss_pred EEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEE
T ss_conf 99789963787470414888567765568997888765887516798820025778741278562236678034763300
Q ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH-------CCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 04877878999999999986118864699995087878999999840-------34278236678888999999999999
Q gi|254780810|r 180 VAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV-------QGEVISSTFDESAARHVQVAEMVIAK 252 (423)
Q Consensus 180 ~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~-------~~~vv~st~d~~~~~~~~~a~~a~~~ 252 (423)
T Consensus 169 f~gsGvGKstLl~~iar~~~~d----v~V~~lIGeRgrEv~efi~~~~~~~~l~~svvv~atsd~~~~~R~~a~~~a~ai 244 (441)
T PRK09099 169 FAPAGVGKSTLMGMFARGTQCD----VNVIALIGERGREVREFIELILGEDGMARSVVVCATSDRSSIERAKAAYAATAI 244 (441)
T ss_pred ECCCCCCHHHHHHHHHHHHCCC----CEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 1589887899999898751368----616886372138999999997624563201798615889988999987750157
Q ss_pred HHHHHHCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf 9999977992899981638987762001366777677-752024665046875225777777850012112012676554
Q gi|254780810|r 253 AKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRMD 331 (423)
Q Consensus 253 a~~~~e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~~ar~~~~~Gs~T~~~t~lvetg~~~d 331 (423)
T Consensus 245 AEyfrd~Gk~VLl~~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~l~ERag~~~-~GSITai~tVl~~-~dd~~ 322 (441)
T PRK09099 245 AEYFRDRGKRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGE-HGSITALYTVLAE-DDSGS 322 (441)
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEEEEEEECC-CCCCC
T ss_conf 889986698189970767799999999998657999856677209988789887403789-9855344445506-88777
Q ss_pred CHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 13889885226607898087884799974053354221015519999999999999996126937899999
Q gi|254780810|r 332 EVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFL 402 (423)
Q Consensus 332 ~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~~~l~~~~~~~~~~~~r~~l~~~~~~e~~~~l 402 (423)
T Consensus 323 ~pi~d~~~si~DGhivLsr~la~~g~yPAIdvl~SvSR~~~~~~~~~~~~~a~~~r~~la~y~e~e~li~~ 393 (441)
T PRK09099 323 DPIAEEVRGILDGHMILSREIAARNQYPAIDVLGSLSRVMPQVVPREHVQAAGRLRRLLAKHREVETLLQV 393 (441)
T ss_pred CCHHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87678777670638998587886699987177415542443441599999999999999989999999973