HHsearch alignment for GI: 254780810 and conserved domain: PRK10416
>PRK10416 cell division protein FtsY; Provisional.
Probab=95.02 E-value=0.28 Score=27.55 Aligned_cols=125 Identities=22% Similarity=0.245 Sum_probs=67.9
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH---HHHHCCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 12220487787899999999998611886469999508787899999---984034278236678888999999999999
Q gi|254780810|r 176 RSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDM---QRSVQGEVISSTFDESAARHVQVAEMVIAK 252 (423)
Q Consensus 176 r~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~---~~~~~~~vv~st~d~~~~~~~~~a~~a~~~ 252 (423)
T Consensus 297 VIl~vGvNG~GKTTTigKLA~~~~~~gkkVllaA-~DTfRaAAieQL~~w~~r~~v~vi~~~~g~Dpa---~V~~dai~~ 372 (499)
T PRK10416 297 VILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAA-GDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSA---SVIFDAIQA 372 (499)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE-ECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHH---HHHHHHHHH
T ss_conf 9999747878789899999999997799537884-066756899999998424573698368999979---999999999
Q ss_pred HHHHHHCCCCEEEE------------EECHHHHHHHHHCCCC--CCCCCC--CCCCCHHHHHHCHHHHHCC
Q ss_conf 99999779928999------------8163898776200136--677767--7752024665046875225
Q gi|254780810|r 253 AKCLVEYGLDVVIL------------LDSITRLCRAYNVLMP--SSGKIL--TGGVDANALQRPKRFFGAA 307 (423)
Q Consensus 253 a~~~~e~G~dVll~------------~DslTR~ArA~~~~~~--~~g~~~--~gg~~~~~l~~~~~~~~~a 307 (423)
T Consensus 373 a~---~~~~DvviiDTAGRl~~~~~LM~EL~ki~rvi~k~~~~aP~e~lLVlDa~tGQna~~qak~F~e~~ 440 (499)
T PRK10416 373 AK---ARNVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAV 440 (499)
T ss_pred HH---HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
T ss_conf 99---729998998577643260999999999999997237899974899977876778999999984427