HHsearch alignment for GI: 254780810 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=94.79 E-value=0.32 Score=27.15 Aligned_cols=85 Identities=18% Similarity=0.257 Sum_probs=51.4
Q ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH---HHHHCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 312220487787899999999998611886469999508787899999---98403427823667888899999999999
Q gi|254780810|r 175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDM---QRSVQGEVISSTFDESAARHVQVAEMVIA 251 (423)
Q Consensus 175 qr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~---~~~~~~~vv~st~d~~~~~~~~~a~~a~~ 251 (423)
T Consensus 101 ~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~---~ia~~a~~ 177 (453)
T PRK10867 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPV---DIVNAALK 177 (453)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHH---HHHHHHHH
T ss_conf 699997468885185899999999973898379855887705899999999985198043678899889---99999999
Q ss_pred HHHHHHHCCCCEEE
Q ss_conf 99999977992899
Q gi|254780810|r 252 KAKCLVEYGLDVVI 265 (423)
Q Consensus 252 ~a~~~~e~G~dVll 265 (423)
T Consensus 178 ~ak---~~~~Dvvi 188 (453)
T PRK10867 178 EAK---LKFYDVLL 188 (453)
T ss_pred HHH---HCCCCEEE
T ss_conf 999---77999999