HHsearch alignment for GI: 254780810 and conserved domain: PRK10867

>PRK10867 signal recognition particle protein; Provisional.
Probab=94.79  E-value=0.32  Score=27.15  Aligned_cols=85  Identities=18%  Similarity=0.257  Sum_probs=51.4

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH---HHHHCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf             312220487787899999999998611886469999508787899999---98403427823667888899999999999
Q gi|254780810|r  175 QRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDM---QRSVQGEVISSTFDESAARHVQVAEMVIA  251 (423)
Q Consensus       175 qr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~---~~~~~~~vv~st~d~~~~~~~~~a~~a~~  251 (423)
T Consensus       101 ~VIm~vGLqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~---~ia~~a~~  177 (453)
T PRK10867        101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPV---DIVNAALK  177 (453)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHH---HHHHHHHH
T ss_conf             699997468885185899999999973898379855887705899999999985198043678899889---99999999


Q ss_pred             HHHHHHHCCCCEEE
Q ss_conf             99999977992899
Q gi|254780810|r  252 KAKCLVEYGLDVVI  265 (423)
Q Consensus       252 ~a~~~~e~G~dVll  265 (423)
T Consensus       178 ~ak---~~~~Dvvi  188 (453)
T PRK10867        178 EAK---LKFYDVLL  188 (453)
T ss_pred             HHH---HCCCCEEE
T ss_conf             999---77999999