HHsearch alignment for GI: 254780810 and conserved domain: PRK12597
>PRK12597 F0F1 ATP synthase subunit beta; Provisional.
Probab=100.00 E-value=0 Score=566.37 Aligned_cols=321 Identities=18% Similarity=0.202 Sum_probs=298.4
Q ss_pred CCCCEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55604601000012212598799988624688876300022225568878851244300020001122343247786532
Q gi|254780810|r 79 PDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENK 158 (423)
Q Consensus 79 ~~DiyVs~slir~f~Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~ 158 (423)
T Consensus 46 ~~~~v~~i~l~~t~Gl~~G~~V~~tg~~l~VpVG~~lLGRV~d~lG~PiDg~~~i~~~~~~pi~~~~p~~~~r~~~~e~l 125 (459)
T PRK12597 46 DETTVRAIALGSTAGLARGDEVRNTGAPIEVPVGEAVLGRLLDVLGEPLDGGPPLPAEERRPIHSTIPPLAEQDTSTELL 125 (459)
T ss_pred CCCEEEEEECCCCCCCCCCCEEEECCCCEEEEECHHHCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 79879999813877888999999689945987086333687678886268888888774555467899843357778720
Q ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH-------CCEEE
Q ss_conf 13688899886551023122204877878999999999986118864699995087878999999840-------34278
Q gi|254780810|r 159 DISSRVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSV-------QGEVI 231 (423)
Q Consensus 159 ~~~~~~id~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~e~~~~~-------~~~vv 231 (423)
T Consensus 126 ~TGIkaID~l~pigrGqrigIfggaGvGKTvL~~~ii~n~~~~~~~-v~V~~~iGER~rEv~e~~~el~~~g~l~~tvvV 204 (459)
T PRK12597 126 ETGIKVIDLLCPIAKGGKTGLFGGAGVGKTVLMMELIFNISKRHQG-SSVFAGVGERSREGHELYLEMKESGVLDKTVMV 204 (459)
T ss_pred CCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC-CEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 0380555412663578777743689998215789999987755178-368886245468899999998636875248999
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHHCCCC
Q ss_conf 236678888999999999999999997-7992899981638987762001366777677-75202466504687522577
Q gi|254780810|r 232 SSTFDESAARHVQVAEMVIAKAKCLVE-YGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFGAARN 309 (423)
Q Consensus 232 ~st~d~~~~~~~~~a~~a~~~a~~~~e-~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~~ar~ 309 (423)
T Consensus 205 ~~~~depp~~R~~~~~~a~tiAEyFrD~~g~dVLl~~D~ltR~A~A~rEisl~lge~P~~~GY~psl~~~l~~l~ER~~~ 284 (459)
T PRK12597 205 YGQMNEPPGARMRVVLTGLTAAEYFRDEEKEDVLLFIDNIFRFVQAGSEVSGLLGRMPSRVGYQPTLASEVAALQERIAS 284 (459)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 80688999999877778889999998637997899955768999999999986379998667695178889999987516
Q ss_pred CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCH-HHCCCHHHHHHHHHHHH
Q ss_conf 77778500121120126765541388988522660789808788479997405335422101-55199999999999999
Q gi|254780810|r 310 IKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKE-DLLVERQDLQKVFMLRR 388 (423)
Q Consensus 310 ~~~~Gs~T~~~t~lvetg~~~d~~i~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~~-~~l~~~~~~~~~~~~r~ 388 (423)
T Consensus 285 ~~-~GSIT~~~~V~v~-~dD~tdPi~~~~~silDg~ivLsr~la~~g~yPAID~l~S~SR~m~~~ivg~~H~~~a~~~~~ 362 (459)
T PRK12597 285 TK-NGSITSIQAVYVP-ADDLTDPAAVAIFSHLDSSVVLSRDQAAKGIYPAIDPLASSSRLLDPLVVGERHYDAAIEVKR 362 (459)
T ss_pred CC-CCCEEEEEEEEEC-CCCCCCCCHHHHEEECCEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 89-9751267899814-888677525543110342899825587779997667666532247876699999999999999
Q ss_pred HHHCCCCHHHHHHH
Q ss_conf 96126937899999
Q gi|254780810|r 389 IVSSMNSSDAIEFL 402 (423)
Q Consensus 389 ~l~~~~~~e~~~~l 402 (423)
T Consensus 363 ~l~~y~eledii~i 376 (459)
T PRK12597 363 ILQRYKELEDVIAI 376 (459)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99998899999997