HHsearch alignment for GI: 254780810 and conserved domain: PRK13537

>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.

Probab=92.62  E-value=0.11  Score=30.30  Aligned_cols=35  Identities=20%  Similarity=0.230  Sum_probs=28.5

Q ss_pred             HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf             88655102312220487787899999999998611
Q gi|254780810|r  167 LIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKN  201 (423)
Q Consensus       167 ~~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~  201 (423)
T Consensus        24 vs~~V~~Gei~gllGpNGAGKTTli~~l~Gl~~p~   58 (304)
T PRK13537         24 LSFHVQPGECFGLLGPNGAGKTTTLKMLLGLTHPD   58 (304)
T ss_pred             EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf             17788699599999998972999999997795689