HHsearch alignment for GI: 254780810 and conserved domain: PRK13900

>PRK13900 type IV secretion system ATPase VirB11; Provisional.
Probab=94.77  E-value=0.21  Score=28.31  Aligned_cols=105  Identities=10%  Similarity=0.018  Sum_probs=57.5

Q ss_pred             CCCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             12598799988624688876300022225568878851244300020001122343247786532136888998865510
Q gi|254780810|r   94 LKTGDTVEGSIRAPREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGK  173 (423)
Q Consensus        94 Lr~GD~V~g~~r~~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~  173 (423)
T Consensus        82 Lp~G~Rv~~v~pp~~~~g~~~ltIRk~~~~~~tl~dl~~~G~~~~~~~~~~~~~--~~~~l-~~~~~~~~~~~fL~~aV~  158 (332)
T PRK13900         82 LPNGYRIQIVFPPACEIGQIIYSIRKPSGMQLTLDDYEKMGAFDETATESLVDE--DDVIL-NELLAEKKIKEFLEHAVI  158 (332)
T ss_pred             ECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCHHHHHCCCCH--HHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf             189846899837831599847999788888899999986498665554201341--56778-876410579999999986


Q ss_pred             CCC-EEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf             231-2220487787899999999998611
Q gi|254780810|r  174 GQR-SLIVAPPRTGKTILLQNIAHSIKKN  201 (423)
Q Consensus       174 gqr-~~i~~~~~~gkt~ll~~ia~~~~~~  201 (423)
T Consensus       159 ~r~NilI~G~TgSGKTTll~aL~~~ip~~  187 (332)
T PRK13900        159 SKKNIIISGGTSTGKTTFTNAALREIPAI  187 (332)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf             48719998888988999999998358953