HHsearch alignment for GI: 254780810 and conserved domain: TIGR01420

>TIGR01420 pilT_fam twitching motility protein; InterPro: IPR006321 These represent the PilT subfamily of proteins related to GspE, a protein involved in type II secretion (also called the General Secretion Pathway). PilT is an apparent cytosolic ATPase associated with type IV pilus systems. It is not required for pilin biogenesis, but is required for twitching motility and social gliding behaviors, shown in some species, powered by pilus retraction . Members of this family may be found in some species that do not have type IV pili but have related structures for DNA uptake and natural transformation. ; GO: 0005524 ATP binding, 0006810 transport.
Probab=92.48  E-value=0.19  Score=28.60  Aligned_cols=57  Identities=21%  Similarity=0.408  Sum_probs=37.8

Q ss_pred             HHCCCC--EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEE------------EECCCC--HHHHHHHHHHHC
Q ss_conf             510231--222048778789999999999861188646999------------950878--789999998403
Q gi|254780810|r  171 IGKGQR--SLIVAPPRTGKTILLQNIAHSIKKNHPECYLIV------------LLIDER--PEEVTDMQRSVQ  227 (423)
Q Consensus       171 ig~gqr--~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~------------~ligEr--~~ev~e~~~~~~  227 (423)
T Consensus       122 ~a~~~~GLiLVTGPTGSGKSTTlAsmIDyIN~~~~~HIiTIEDPIEyvh~~~~sli~QREvG~DT~sF~~ALr  194 (350)
T TIGR01420       122 LAERPRGLILVTGPTGSGKSTTLASMIDYINKNKAGHIITIEDPIEYVHKNKRSLINQREVGLDTLSFANALR  194 (350)
T ss_pred             HHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCEEEEECCCCCCCHHHHHHHHH
T ss_conf             9836699389876889867899999997874038888256317731410477024543624675457999976