HHsearch alignment for GI: 254780810 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=93.51 E-value=0.15 Score=29.38 Aligned_cols=49 Identities=22% Similarity=0.189 Sum_probs=27.8
Q ss_pred HHCCCC-EEEECCCCCCHHHHHHHHHHHHHHCCC-CCEEEEEECCCCHHHH
Q ss_conf 510231-222048778789999999999861188-6469999508787899
Q gi|254780810|r 171 IGKGQR-SLIVAPPRTGKTILLQNIAHSIKKNHP-ECYLIVLLIDERPEEV 219 (423)
Q Consensus 171 ig~gqr-~~i~~~~~~gkt~ll~~ia~~~~~~~~-~v~~i~~ligEr~~ev 219 (423)
T Consensus 190 ~~~~~~vi~lvGPTGVGKTTTiAKLAa~~~l~~~~~~V~lIT~DtyRigA~ 240 (282)
T TIGR03499 190 ILEQGGVIALVGPTGVGKTTTLAKLAARFVLEHGKKKVALITTDTYRIGAV 240 (282)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
T ss_conf 445672799977888757889999999999973899679998077767899