HHsearch alignment for GI: 254780810 and conserved domain: TIGR03600
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=94.27 E-value=0.1 Score=30.47 Aligned_cols=60 Identities=27% Similarity=0.252 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHH-HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH
Q ss_conf 32136888998865-510231222048778789999999999861188646999950878789
Q gi|254780810|r 157 NKDISSRVIDLIAP-IGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEE 218 (423)
Q Consensus 157 p~~~~~~~id~~~p-ig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~e 218 (423)
T Consensus 176 Gi~TG~~~LD~~~~Gl~~g~LiIiaARPsmGKTafalnia~n~A~~~g~~Vl~f--SLEMs~e 236 (421)
T TIGR03600 176 GLSTGLPKLDRLTNGLVKGDLIVIGARPSMGKTTLALNIAENVALREGKPVLFF--SLEMSAE 236 (421)
T ss_pred CCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEE--ECCCCHH
T ss_conf 787880789998369998868999854678745999999999998669838999--2579999