>cd01135 V_A-ATPase_B V/A-type ATP synthase (non-catalytic) subunit B. These ATPases couple ATP hydrolysis to the build up of a H+ gradient, but V-type ATPases do not catalyze the reverse reaction. The Vacuolar (V-type) ATPase is found in the membranes of vacuoles, the golgi apparatus and in other coated vesicles in eukaryotes. Archaea have a protein which is similar in sequence to V-ATPases, but functions like an F-ATPase (called A-ATPase). A similar protein is also found in a few bacteria. This subfamily consists of the non-catalytic beta subunit.

Probab=100.00 E-value=0 Score=508.92 Aligned_cols=263 Identities=14% Similarity=0.143 Sum_probs=246.0 Q ss_pred CCCCCCCCCCEEECCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC Q ss_conf 46888763000222255688788512443000200011223432477865321368889988655102312220487787 Q gi|254780810|r 107 PREGERYFALLKVNAINFDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPPRTG 186 (423) Q Consensus 107 ~~~~~~~~~L~rV~~vnG~~~d~~~~~~~f~~l~p~~p~~~i~le~~~~~p~~~~~~~id~~~pig~gqr~~i~~~~~~g 186 (423) T Consensus 2 l~VpVG~~lLGRVvd~lG~PiDg~~~i~~~~~~~i~~~ap~p~~R~~v~e~l~TGIkaID~l~pig~GQR~gIfgg~GvG 81 (276) T cd01135 2 LKVPVSEDMLGRIFNGSGKPIDGGPEILAEEYLDINGPPINPVARIYPEEMIQTGISAIDGMNTLVRGQKIPIFSGSGLP 81 (276) T ss_pred EEEECCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCC T ss_conf 69874777337474588331279999999864024589978044067786322585354054672367663320578863 Q ss_pred HHHHHHHHHHHHH--HCCCCCEEEEEECCCCHHHHHHHHHHH-------CCEEEECCCCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 8999999999986--118864699995087878999999840-------3427823667888899999999999999999 Q gi|254780810|r 187 KTILLQNIAHSIK--KNHPECYLIVLLIDERPEEVTDMQRSV-------QGEVISSTFDESAARHVQVAEMVIAKAKCLV 257 (423) Q Consensus 187 kt~ll~~ia~~~~--~~~~~v~~i~~ligEr~~ev~e~~~~~-------~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~ 257 (423) T Consensus 82 Ks~L~~~i~~~~~~~~~~~~~v~V~~~IGer~rev~e~~~~l~~~~~l~~tvvv~ata~~~p~~r~~a~~~a~aiAEyFr 161 (276) T cd01135 82 HNELAAQIARQAGVVGEEENFAVVFAAMGITMEDARFFKDDFEETGALERVVLFLNLANDPTIERIITPRMALTTAEYLA 161 (276) T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 67899999998775136887359996155532579999999871665121014663488976888788888778999988 Q ss_pred -HCCCCEEEEEECHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHCHHHHHCCCCCCC-CCCCEEEEEEEECCCCCCCCHH Q ss_conf -77992899981638987762001366777677-75202466504687522577777-7850012112012676554138 Q gi|254780810|r 258 -EYGLDVVILLDSITRLCRAYNVLMPSSGKILT-GGVDANALQRPKRFFGAARNIKE-GGSLTIIGTALVDTGSRMDEVI 334 (423) Q Consensus 258 -e~G~dVll~~DslTR~ArA~~~~~~~~g~~~~-gg~~~~~l~~~~~~~~~ar~~~~-~Gs~T~~~t~lvetg~~~d~~i 334 (423) T Consensus 162 ~~~Gk~VLl~~D~ltr~A~A~REisl~~g~~P~~~gYp~~vf~~l~~l~ERag~~~~~~GSITa~~~v~~~-~dD~~~pi 240 (276) T cd01135 162 YEKGKHVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVEGRNGSITQIPILTMP-NDDITHPI 240 (276) T ss_pred HHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECC-CCCCCCCH T ss_conf 73699779994568899999999998648999878888509988678887224679998018999899447-98867766 Q ss_pred HHHHHHCCCCEEEEEHHHHHCCCCCCCCCCCCCCCC Q ss_conf 898852266078980878847999740533542210 Q gi|254780810|r 335 FEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRK 370 (423) Q Consensus 335 ~~~~~~~~d~~i~L~r~la~~~~~PAId~~~S~sR~ 370 (423) T Consensus 241 ~~~~~si~DG~i~Lsr~la~~G~~PAId~~~S~SRv 276 (276) T cd01135 241 PDLTGYITEGQIVLDRQLHNRGIYPPINVLPSLSRL 276 (276) T ss_pred HHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCCCCC T ss_conf 777765604599997999967999970875576679

HHsearch alignment for GI: 254780810 and conserved domain: cd01135