HHsearch alignment for GI: 254780810 and conserved domain: cd03215
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=93.18 E-value=0.039 Score=33.18 Aligned_cols=33 Identities=15% Similarity=0.034 Sum_probs=27.9
Q ss_pred HHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 865510231222048778789999999999861
Q gi|254780810|r 168 IAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKK 200 (423)
Q Consensus 168 ~~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~ 200 (423)
T Consensus 20 sl~v~~GEi~~liG~nGaGKSTll~~l~G~~~p 52 (182)
T cd03215 20 SFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP 52 (182)
T ss_pred EEEECCCCEEEEECCCCCCCCHHHHHHCCCCCC
T ss_conf 789859969999888999926377876698678