HHsearch alignment for GI: 254780810 and conserved domain: cd03258
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.64 E-value=0.021 Score=35.00 Aligned_cols=61 Identities=20% Similarity=0.343 Sum_probs=40.2
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE----ECCCCHHHHHHHHHHHCCEEEEC
Q ss_conf 655102312220487787899999999998611886469999----50878789999998403427823
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL----LIDERPEEVTDMQRSVQGEVISS 233 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~----ligEr~~ev~e~~~~~~~~vv~s 233 (423)
T Consensus 26 l~i~~Ge~~~ivG~SGsGKSTllr~i~g-L~~--p~sG~I~~~g~~i~~~~~~~~~~~Rr~i-g~VFQ~ 90 (233)
T cd03258 26 LSVPKGEIFGIIGRSGAGKSTLIRCING-LER--PTSGSVLVDGTDLTLLSGKELRKARRRI-GMIFQH 90 (233)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHC-CCC--CCCCEEEECCEECCCCCHHHHHHHHCCC-CEEECC
T ss_conf 8999999999988980589999999967-999--9980899999998979999999986258-779437