HHsearch alignment for GI: 254780810 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.08 E-value=0.025 Score=34.45 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=27.3
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 65510231222048778789999999999861
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHSIKK 200 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~ 200 (423)
T Consensus 22 l~i~~Ge~~~IvG~sGsGKSTLl~~l~g~~~~ 53 (218)
T cd03290 22 IRIPTGQLTMIVGQVGCGKSSLLLAILGEMQT 53 (218)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 99869999999999998099999998555656