HHsearch alignment for GI: 254780810 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=95.55 E-value=0.013 Score=36.37 Aligned_cols=32 Identities=19% Similarity=0.290 Sum_probs=28.1
Q ss_pred HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 65510231222048778789999999999861
Q gi|254780810|r 169 APIGKGQRSLIVAPPRTGKTILLQNIAHSIKK 200 (423)
Q Consensus 169 ~pig~gqr~~i~~~~~~gkt~ll~~ia~~~~~ 200 (423)
T Consensus 29 l~i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~p 60 (207)
T cd03369 29 FKVKAGEKIGIVGRTGAGKSTLILALFRFLEA 60 (207)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 89869999999999998799999999987288