HHsearch alignment for GI: 254780810 and conserved domain: pfam00308
>pfam00308 Bac_DnaA Bacterial dnaA protein.
Probab=96.24 E-value=0.098 Score=30.54 Aligned_cols=51 Identities=24% Similarity=0.285 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHCCCC---EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 36888998865510231---22204877878999999999986118864699995
Q gi|254780810|r 160 ISSRVIDLIAPIGKGQR---SLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLL 211 (423)
Q Consensus 160 ~~~~~id~~~pig~gqr---~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~l 211 (423)
T Consensus 18 ~a~~~~~~i~~-~~~~~~npl~i~G~~G~GKTHLLqA~~~~~~~~~~~~~v~yl~ 71 (219)
T pfam00308 18 FAHAAALAVAE-APGKAYNPLFIYGGVGLGKTHLLHAIGNYALRNFPNLRVVYLT 71 (219)
T ss_pred HHHHHHHHHHH-CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 99999999996-7587678269988999988899999999999849998288843