HHsearch alignment for GI: 254780810 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=96.04 E-value=0.0098 Score=37.11 Aligned_cols=53 Identities=25% Similarity=0.376 Sum_probs=32.0
Q ss_pred HHHHHHHHHHC-CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH
Q ss_conf 88998865510-23122204877878999999999986118864699995087878999
Q gi|254780810|r 163 RVIDLIAPIGK-GQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVT 220 (423)
Q Consensus 163 ~~id~~~pig~-gqr~~i~~~~~~gkt~ll~~ia~~~~~~~~~v~~i~~ligEr~~ev~ 220 (423)
T Consensus 127 ~~~~~L~~~v~~~~~ilIsG~TGSGKTT~l~all~~i~~~--~-~rii-ti-ED~~El~ 180 (283)
T pfam00437 127 DIAEFLRQAVQARGNILVSGGTGSGKTTLLYALLNEINTD--D-ERIV-TI-EDPVEIQ 180 (283)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCC--C-CCEE-EE-CCCCEEC
T ss_conf 9999999999819759998899998899999999840877--7-6278-73-3785231