HHsearch alignment for GI: 254780810 and conserved domain: pfam08423

>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=95.76  E-value=0.16  Score=29.12  Aligned_cols=116  Identities=18%  Similarity=0.230  Sum_probs=65.4

Q ss_pred             CCCCHHHHHHHHHHHHH--CCCCEEEECCCCCCHHHHHHHHHHHHH----HCCCCCEEEEE-ECC-CCHHHHHHHHHHH-
Q ss_conf             53213688899886551--023122204877878999999999986----11886469999-508-7878999999840-
Q gi|254780810|r  156 ENKDISSRVIDLIAPIG--KGQRSLIVAPPRTGKTILLQNIAHSIK----KNHPECYLIVL-LID-ERPEEVTDMQRSV-  226 (423)
Q Consensus       156 ~p~~~~~~~id~~~pig--~gqr~~i~~~~~~gkt~ll~~ia~~~~----~~~~~v~~i~~-lig-Er~~ev~e~~~~~-  226 (423)
T Consensus        23 ~~isTg~~~LD~lLgGGi~~g~ITEi~G~~gsGKTQlc~qlav~~qlp~~~gg~~g~vvyIDTEg~f~~eRl~qia~~~~  102 (261)
T pfam08423        23 IRITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLPLEMGGGEGKALYIDTEGTFRPERIVAIAERFG  102 (261)
T ss_pred             CEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf             35778987899873798667729999899888789999999999407096569997289993688869899999999829


Q ss_pred             ------CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf             ------34278236678888999999999999999997799289998163898776
Q gi|254780810|r  227 ------QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRA  276 (423)
Q Consensus       227 ------~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA  276 (423)
T Consensus       103 ~~~~~~L~~I~v~r~~~~-~~~~~~----l~~~~~~~~~~~v~LvVvDSiaalfR~  153 (261)
T pfam08423       103 LDPEEVLDNIAYARAYNT-EHQMQL----LLQAAAMMSESRFALLIVDSATALYRT  153 (261)
T ss_pred             CCHHHHHHHCEECCCCCH-HHHHHH----HHHHHHHHHCCCCEEEEEECCCEEEEE
T ss_conf             997898753314168998-999999----999999873178349998324002333