HHsearch alignment for GI: 254780810 and conserved domain: pfam08423
>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=95.76 E-value=0.16 Score=29.12 Aligned_cols=116 Identities=18% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCCCHHHHHHHHHHHHH--CCCCEEEECCCCCCHHHHHHHHHHHHH----HCCCCCEEEEE-ECC-CCHHHHHHHHHHH-
Q ss_conf 53213688899886551--023122204877878999999999986----11886469999-508-7878999999840-
Q gi|254780810|r 156 ENKDISSRVIDLIAPIG--KGQRSLIVAPPRTGKTILLQNIAHSIK----KNHPECYLIVL-LID-ERPEEVTDMQRSV- 226 (423)
Q Consensus 156 ~p~~~~~~~id~~~pig--~gqr~~i~~~~~~gkt~ll~~ia~~~~----~~~~~v~~i~~-lig-Er~~ev~e~~~~~- 226 (423)
T Consensus 23 ~~isTg~~~LD~lLgGGi~~g~ITEi~G~~gsGKTQlc~qlav~~qlp~~~gg~~g~vvyIDTEg~f~~eRl~qia~~~~ 102 (261)
T pfam08423 23 IRITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLPLEMGGGEGKALYIDTEGTFRPERIVAIAERFG 102 (261)
T ss_pred CEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 35778987899873798667729999899888789999999999407096569997289993688869899999999829
Q ss_pred ------CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf ------34278236678888999999999999999997799289998163898776
Q gi|254780810|r 227 ------QGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSITRLCRA 276 (423)
Q Consensus 227 ------~~~vv~st~d~~~~~~~~~a~~a~~~a~~~~e~G~dVll~~DslTR~ArA 276 (423)
T Consensus 103 ~~~~~~L~~I~v~r~~~~-~~~~~~----l~~~~~~~~~~~v~LvVvDSiaalfR~ 153 (261)
T pfam08423 103 LDPEEVLDNIAYARAYNT-EHQMQL----LLQAAAMMSESRFALLIVDSATALYRT 153 (261)
T ss_pred CCHHHHHHHCEECCCCCH-HHHHHH----HHHHHHHHHCCCCEEEEEECCCEEEEE
T ss_conf 997898753314168998-999999----999999873178349998324002333