RPSBLAST alignment for GI: 254780810 and conserved domain: TIGR01026

>gnl|CDD|162162 TIGR01026, fliI_yscN, ATPase FliI/YscN family. This family of ATPases demonstrates extensive homology with ATP synthase F1, beta subunit. It is a mixture of members with two different protein functions. The first group is exemplified by Salmonella typhimurium FliI protein. It is needed for flagellar assembly, its ATPase activity is required for flagellation, and it may be involved in a specialized protein export pathway that proceeds without signal peptide cleavage. The second group of proteins function in the export of virulence proteins; exemplified by Yersinia sp. YscN protein an ATPase involved in the type III secretory pathway for the antihost Yops proteins. Length = 440
 Score = 92.8 bits (231), Expect = 1e-19
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 36/272 (13%)

Query: 163 RVIDLIAPIGKGQRSLIVAPPRTGKTILLQNIAHSIKKNHPECYLIVL-LIDERPEEVTD 221
           R ID +  +GKGQR  I A    GK+ LL  IA      + E  + V+ LI ER  EV +
Sbjct: 152 RSIDGLLTVGKGQRIGIFAGSGVGKSTLLGMIAR-----NTEADVNVIALIGERGREVRE 206

Query: 222 ----------MQRSVQGEVISSTFDESAARHVQVAEMVIAKAKCLVEYGLDVVILLDSIT 271
                     ++RSV   V+ +T D+S    ++ A +  A A+   + G DV++L+DS+T
Sbjct: 207 FIEHDLGEEGLKRSV---VVVATSDQSPLLRLKGAYVATAIAEYFRDQGKDVLLLMDSVT 263

Query: 272 RLCRAYNVLMPSSGKI-LTGGVDANALQRPKRFFGAARNIKEGGSLTIIGTALVDTGSRM 330
           R   A   +  ++G+   T G   +      R    A      GS+T   T LV+ G  M
Sbjct: 264 RFAMAQREIGLAAGEPPATKGYTPSVFSTLPRLLERA-GASGKGSITAFYTVLVE-GDDM 321

Query: 331 DEVIFEEFKGTGNSEIVLERKIADKRIFPAMDIIKSGTRKEDLLVERQDLQKVFMLRRIV 390
           +E I +  +G  +  IVL R +A +  +PA+D++ S +R    +V  +  +     R ++
Sbjct: 322 NEPIADSVRGILDGHIVLSRALAQRGHYPAIDVLASISRLMTAIVSEEHRRAARKFRELL 381

Query: 391 SS--------------MNSSDAIEFLIDKLKQ 408
           S                 S   ++F I K  +
Sbjct: 382 SKYKDNEDLIRIGAYQRGSDRELDFAIAKYPK 413