RPSBLAST alignment for GI: 254780810 and conserved domain: PRK09376

>gnl|CDD|181809 PRK09376, rho, transcription termination factor Rho; Provisional. Length = 416
 Score =  810 bits (2096), Expect = 0.0
 Identities = 300/418 (71%), Positives = 362/418 (86%), Gaps = 2/418 (0%)

Query: 4   MKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQD 63
           M L ELKNKS ++LL  AE L IENA+ +RKQEL+F+ILK  + +  +I GEGV+E+L D
Sbjct: 1   MNLSELKNKSLSELLELAEELGIENASRLRKQELIFAILKAQAEKGGDIFGEGVLEILPD 60

Query: 64  GFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAIN 123
           GFGFLRSPDANYL GPDDIYVSPSQI+ F+L+TGDTVEG IR P+EGERYFALLKV  +N
Sbjct: 61  GFGFLRSPDANYLPGPDDIYVSPSQIRRFNLRTGDTVEGKIRPPKEGERYFALLKVETVN 120

Query: 124 FDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPP 183
            + PE+ RN+  F+NLTPLYP++R  +E  NPE  D+S+R+IDLIAPIGKGQR LIVAPP
Sbjct: 121 GEDPEKARNRPLFENLTPLYPNERLRLETGNPE--DLSTRIIDLIAPIGKGQRGLIVAPP 178

Query: 184 RTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHV 243
           + GKT+LLQNIA+SI  NHPE +LIVLLIDERPEEVTDMQRSV+GEV++STFDE A RHV
Sbjct: 179 KAGKTVLLQNIANSITTNHPEVHLIVLLIDERPEEVTDMQRSVKGEVVASTFDEPAERHV 238

Query: 244 QVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRF 303
           QVAEMVI KAK LVE+G DVVILLDSITRL RAYN ++PSSGK+L+GGVDANAL RPKRF
Sbjct: 239 QVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNTVVPSSGKVLSGGVDANALHRPKRF 298

Query: 304 FGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDI 363
           FGAARNI+EGGSLTII TAL+DTGSRMDEVIFEEFKGTGN E+ L+RK+A+KRIFPA+DI
Sbjct: 299 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELHLDRKLAEKRIFPAIDI 358

Query: 364 IKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNK 421
            +SGTRKE+LL+  ++LQKV++LR+I+S M+  +A+EFL+DKLK+TK N++FF SMN+
Sbjct: 359 NRSGTRKEELLLSPEELQKVWILRKILSPMDEVEAMEFLLDKLKKTKTNEEFFDSMNR 416