RPSBLAST alignment for GI: 254780810 and conserved domain: PRK09376
>gnl|CDD|181809 PRK09376, rho, transcription termination factor Rho; Provisional. Length = 416
Score = 810 bits (2096), Expect = 0.0
Identities = 300/418 (71%), Positives = 362/418 (86%), Gaps = 2/418 (0%)
Query: 4 MKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQD 63
M L ELKNKS ++LL AE L IENA+ +RKQEL+F+ILK + + +I GEGV+E+L D
Sbjct: 1 MNLSELKNKSLSELLELAEELGIENASRLRKQELIFAILKAQAEKGGDIFGEGVLEILPD 60
Query: 64 GFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAIN 123
GFGFLRSPDANYL GPDDIYVSPSQI+ F+L+TGDTVEG IR P+EGERYFALLKV +N
Sbjct: 61 GFGFLRSPDANYLPGPDDIYVSPSQIRRFNLRTGDTVEGKIRPPKEGERYFALLKVETVN 120
Query: 124 FDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPP 183
+ PE+ RN+ F+NLTPLYP++R +E NPE D+S+R+IDLIAPIGKGQR LIVAPP
Sbjct: 121 GEDPEKARNRPLFENLTPLYPNERLRLETGNPE--DLSTRIIDLIAPIGKGQRGLIVAPP 178
Query: 184 RTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHV 243
+ GKT+LLQNIA+SI NHPE +LIVLLIDERPEEVTDMQRSV+GEV++STFDE A RHV
Sbjct: 179 KAGKTVLLQNIANSITTNHPEVHLIVLLIDERPEEVTDMQRSVKGEVVASTFDEPAERHV 238
Query: 244 QVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRF 303
QVAEMVI KAK LVE+G DVVILLDSITRL RAYN ++PSSGK+L+GGVDANAL RPKRF
Sbjct: 239 QVAEMVIEKAKRLVEHGKDVVILLDSITRLARAYNTVVPSSGKVLSGGVDANALHRPKRF 298
Query: 304 FGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDI 363
FGAARNI+EGGSLTII TAL+DTGSRMDEVIFEEFKGTGN E+ L+RK+A+KRIFPA+DI
Sbjct: 299 FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMELHLDRKLAEKRIFPAIDI 358
Query: 364 IKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNK 421
+SGTRKE+LL+ ++LQKV++LR+I+S M+ +A+EFL+DKLK+TK N++FF SMN+
Sbjct: 359 NRSGTRKEELLLSPEELQKVWILRKILSPMDEVEAMEFLLDKLKKTKTNEEFFDSMNR 416