HHsearch alignment for GI: 254780811 and conserved domain: PRK10278

>PRK10278 putative transcriptional regulator; Provisional.
Probab=96.59  E-value=0.05  Score=30.87  Aligned_cols=118  Identities=19%  Similarity=0.281  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCCC---
Q ss_conf             4668999999999999999999999899999875546742679999999999999998999999--99999997012---
Q gi|254780811|r   37 SQFNLCIKSIHILSVISWMAGLLYMPRIFVYHSLSAPDTDQYKTFEIMEERLFKVIMNPAMILS--WVCGLYLAWKT---  111 (178)
Q Consensus        37 ~~~YlwiKalHIi~Vi~WmAGLfyLPRlfVyh~e~~~~~~~~~~~~~merrL~~~I~~PAmila--~i~Gl~L~~~~---  111 (178)
T Consensus         1 m~~Y~~lKhlHl~~v~l--Sv~~F~lR~~--w~~~~--S~------~l~~rwvki~--PHviDT~LLlSgi~L~~~~~~~   66 (130)
T PRK10278          1 MTSFSTLLSVHLISVAL--SVGLFVLRFW--WRYQK--HP------LAFARWTRIV--PPVVDTLLLLSGIGLMAKTHIL   66 (130)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHHHHHH--HHHCC--CH------HHHCCHHHHC--CCHHHHHHHHHHHHHHHHHCCC
T ss_conf             94799999999999999--9999999999--99879--86------6725547727--5247689999999999997658


Q ss_pred             CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHC
Q ss_conf             123-203899999999999999999999999995699998846899999999-99999999998406
Q gi|254780811|r  112 FYI-HIGWLRLKMISVLFLSFYHVYLSFVMRKFRDKKLFHSPKYFKIINEIP-TLIMIIIVFLSVIK  176 (178)
Q Consensus       112 ~~~-~~~Wl~vKL~~V~lL~~yH~~~~~~lk~~~~g~~~~s~~~~R~~NEiP-~llli~IViLVVvK  176 (178)
T Consensus        67 Pf~~~~~WLt~Kl~~ll~YI~LG~i----AL~~r~~r----s~~~R~~Af~~Al~~~~~iv~vA~TK  125 (130)
T PRK10278         67 PFTGQGQWLTEKLFGVIIYIVLGFI----ALDYRRMR----SQQARFIAFPLALVVLYIIIKLATTK  125 (130)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHH----HHHCCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             7778986599999999999999999----97111361----16589999999999999999999606