HHsearch alignment for GI: 254780811 and conserved domain: TIGR00701

>TIGR00701 TIGR00701 conserved hypothetical protein TIGR00701; InterPro: IPR014351 There is currently no experimental data for members of this entry or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments). There is an indirect indication of a link between this protein and the function or assembly of cytochromes: in Escherichia coli, strains producing related proteins not included in this entry turn pink, perhaps because of an excess of accumulated haems ..
Probab=100.00  E-value=0  Score=360.02  Aligned_cols=140  Identities=39%  Similarity=0.820  Sum_probs=133.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C
Q ss_conf             6899999999999999999999989999987554674267999-----999999999999899999999999997012-1
Q gi|254780811|r   39 FNLCIKSIHILSVISWMAGLLYMPRIFVYHSLSAPDTDQYKTF-----EIMEERLFKVIMNPAMILSWVCGLYLAWKT-F  112 (178)
Q Consensus        39 ~YlwiKalHIi~Vi~WmAGLfyLPRlfVyh~e~~~~~~~~~~~-----~~merrL~~~I~~PAmila~i~Gl~L~~~~-~  112 (178)
T Consensus         1 yylWfKafHlI~~i~WmAgLfYLpRlfVYHaea~~~~E~~~t~lkkqyq~~EkkLy~fI~~PaM~~T~i~gi~~~~iep~   80 (151)
T TIGR00701         1 YYLWFKAFHLISVIVWMAGLFYLPRLFVYHAEAKIEKELASTVLKKQYQVMEKKLYRFIASPAMVVTLIFGILLLFIEPE   80 (151)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
T ss_conf             94278899999999999998888788666221115765025566667899999999863485079999999999986763


Q ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC---CC
Q ss_conf             23203-89999999999999999999999999569999884689999999999999999998406---89
Q gi|254780811|r  113 YIHIG-WLRLKMISVLFLSFYHVYLSFVMRKFRDKKLFHSPKYFKIINEIPTLIMIIIVFLSVIK---PF  178 (178)
Q Consensus       113 ~~~~~-Wl~vKL~~V~lL~~yH~~~~~~lk~~~~g~~~~s~~~~R~~NEiP~llli~IViLVVvK---PF  178 (178)
T Consensus        81 ~~ksgGWl~~Kl~~V~lLl~yHfyc~r~~k~lakg~~~~s~~fyR~~NEaPtIlmv~iVilvvvKnnlPf  150 (151)
T TIGR00701        81 VLKSGGWLHIKLALVVLLLIYHFYCARVMKDLAKGKSRRSKKFYRVLNEAPTILMVVIVILVVVKNNLPF  150 (151)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             3002455999999999999999999999999743865213213012432669999999999998315789