HHsearch alignment for GI: 254780812 and conserved domain: PRK06520
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional.
Probab=98.17 E-value=9.7e-05 Score=54.19 Aligned_cols=209 Identities=12% Similarity=0.051 Sum_probs=123.6
Q ss_pred HHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 877787642102453201111-4799999999612467765246775301372228999999999999997777754981
Q gi|254780812|r 123 IFQSISILRKKLPNHITLIGF-CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201 (346)
Q Consensus 123 v~eAi~~~k~~l~~~~pLIGF-~GgP~TlasYmieG~~sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad 201 (346)
T Consensus 118 ~~~~~~~l~~~t~--~~~~K~tipsP~~l~~~~----~~~~~~~---~~Y~~~---~~~~~dlA~a~~~Ei~~L~~aG~~ 185 (370)
T PRK06520 118 MLDHFRFLKSHAG--DATPKMTIPSPSVLHFRG----GRKAIDA---EVYPDL---DAFFDDLAKTYRDAVKAFYDAGCR 185 (370)
T ss_pred HHHHHHHHHHHCC--CCCCCEEECCHHHHHHCC----CCCCCCH---HCCCCH---HHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 4999999997469--999847869279983305----5222421---107999---999999999999999999987998
Q ss_pred EEEECCC-CHHHCCHHHH----------HHHHCCCHHHHHHHHHHHCCCCE-EECCCCCCCC-----------CHHHHHC
Q ss_conf 6784383-1100683567----------77612722689999863088623-6024311000-----------0134201
Q gi|254780812|r 202 VIQIFDT-HAGCLGEHEF----------ENYAARSVGRIISAVRRKYPNAK-FISFAKGAGY-----------MLKNYRR 258 (346)
Q Consensus 202 ~iqIFDs-~ag~Ls~~~f----------~~f~~p~~kkI~~~ik~~~~~vp-iI~f~~g~~~-----------~l~~~~~ 258 (346)
T Consensus 186 ~IQiDep~~a~l~~~~~~~~~~~~~~~~~~l~~~~~~~~N~al~~~p~d~~i~~HiC~Gn~~~~~~~~g~Y~~i~~~l~~ 265 (370)
T PRK06520 186 YLQLDDTVWAYLCSDDERQQARERGDDPDNLQQIYARVINYAIAERPADLTITLHVCRGNFRSTWISEGGYEPVAETLLG 265 (370)
T ss_pred EEEECCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 89875741653068777867765368999999999999999970899774899987678878776556664667999984
Q ss_pred CCCCCEEECCCCCC----HHHHHHH--CCCEEEECCCCHHH-HCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCC----
Q ss_conf 47872230467799----8999970--79846968888467-7099889999999999973259928960897633----
Q gi|254780812|r 259 LTDSNAIGLDWSVP----LSFALEL--QKEGPVQGNLDPMR-LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP---- 327 (346)
Q Consensus 259 ~~g~d~isiD~~~d----l~~a~~~--~~~~~lqGNldP~~-L~~~~e~i~~~~~~~l~~~~~~~~I~nLGhGi~p---- 327 (346)
T Consensus 266 ~~~vd~~~lE~d~~r~g~~e~L~~l~~~~k~vvlGvid~~~~~vE~~eev~~RI~~A~~~vp~erl~~spdCGFas~~~g 345 (370)
T PRK06520 266 GVNVDAYFLEYDNERAGGFEPLRFLPKGNKQVVLGLITSKNGELENKDDVKRRLEEAAKFVPLEQLCLSPQCGFASTEEG 345 (370)
T ss_pred HCCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCC
T ss_conf 37888589984475445422677568678779986783799999999999999999996179999888788898760238
Q ss_pred -----CCCHHHHHHHHHHHHH
Q ss_conf -----6688999999999973
Q gi|254780812|r 328 -----QVDPKNVLDLVKTVRS 343 (346)
Q Consensus 328 -----~tp~eNv~~~v~~vr~ 343 (346)
T Consensus 346 ~~lt~e~~w~KL~~~~e~A~~ 366 (370)
T PRK06520 346 NSLSEDEQWDKLRLVVEIANE 366 (370)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
T ss_conf 888999999999999999999