HHsearch alignment for GI: 254780812 and conserved domain: TIGR01464
>TIGR01464 hemE uroporphyrinogen decarboxylase; InterPro: IPR006361 This entry represents uroporphyrinogen decarboxylase (HemE), which catalyzes the fifth step in the heme biosynthetic pathway, converting uroporphyrinogen III to coproporphyrinogen III by decarboxylating the four acetate side chains of the substrate . This step takes the pathway toward protoporphyrin IX, a common precursor of both heme and chlorophyll, rather than toward precorrin 2 and its products. This activity is essential in all organisms, and subnormal activity of URO-D leads to the most common form of porphyria in humans, porphyria cutanea tarda (PCT).; GO: 0004853 uroporphyrinogen decarboxylase activity, 0006779 porphyrin biosynthetic process.
Probab=100.00 E-value=0 Score=966.93 Aligned_cols=336 Identities=45% Similarity=0.781 Sum_probs=316.8
Q ss_pred HHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCHHHCC
Q ss_conf 99999669989999761462312345799999761553899842799999987212876298726521332001043244
Q gi|254780812|r 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGR 86 (346)
Q Consensus 7 ~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~ealG~ 86 (346)
T Consensus 1 ~~L~A~~Ge~~~r~PVW~MRQAGRYLPEYr~~R~~~~dF~~~c~~pdla~EvTLQP~rr~g~DAAIlFsDILv~p~alG~ 80 (351)
T TIGR01464 1 LFLRAAKGEVVDRPPVWFMRQAGRYLPEYRELRAKAGDFLELCRNPDLAVEVTLQPIRRFGVDAAILFSDILVPPQALGL 80 (351)
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 94433157979597774301534686689999635866688734924178721374535488768881220238400385
Q ss_pred CEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 3373168875222-3333355420567012344323787778764210245-3201111479999999961246776524
Q gi|254780812|r 87 NVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN-HITLIGFCGAPWTVASYMISGGFIKDHG 164 (346)
Q Consensus 87 ~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~-~~pLIGF~GgP~TlasYmieG~~sk~~~ 164 (346)
T Consensus 81 ~v~f~~G~GP~~~~p~~~~~dv~~l~~-~d~~~~l~yV~~ai~~~r~~L~~~~vpLIGFaGaPwTLasYmIEGggSk~~~ 159 (351)
T TIGR01464 81 DVEFVEGKGPVISNPIRTAEDVERLKE-FDPESELSYVYEAIKLLREELDGVEVPLIGFAGAPWTLASYMIEGGGSKDFA 159 (351)
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCCHH
T ss_conf 168745878716889988666866213-2303301279999999999837788644630686055343010278986779
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCC-----C
Q ss_conf 67753013722289999999999999977777549816784383110068356777612722689999863088-----6
Q gi|254780812|r 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----N 239 (346)
Q Consensus 165 ~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~-----~ 239 (346)
T Consensus 160 ~~K~f~y~~P~~~~aLl~~Lt~~~~~YL~~Qv~AGA~avQiFDSWag~Ls~~df~~fv~py~~~I~~~vk~~~~e~~~~~ 239 (351)
T TIGR01464 160 KAKKFMYEEPEALHALLNKLTDATIEYLSEQVKAGAQAVQIFDSWAGALSPEDFEEFVLPYLAKIIEEVKKRLPEFVLEN 239 (351)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99998720858999999999999999999988618848999633464479878888508899999999987621257898
Q ss_pred CEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHH-HCCC--EEEECCCCHHHHCCCHHHHHHHHHHHHHHHCC--
Q ss_conf 236024311000013420147872230467799899997-0798--46968888467709988999999999997325--
Q gi|254780812|r 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE--GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-- 314 (346)
Q Consensus 240 vpiI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~-~~~~--~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~-- 314 (346)
T Consensus 240 ~P~I~F~~G~g~~l~~~~~~g~~DvvglDW~v~~~~a~~~~~~~kP~~~QGNLDP~~L~~~~~~l~~~~~~~l~~~~~~A 319 (351)
T TIGR01464 240 VPVILFAKGAGHLLEELAETGPADVVGLDWSVDLKEARKRVGDGKPVAIQGNLDPAVLYAPEEALEEKVERILEAFGQEA 319 (351)
T ss_pred CCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 86688528778999999706992088605888989999971799987885643322221898999999999999731257
Q ss_pred C---CCEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9---9289608976336688999999999973
Q gi|254780812|r 315 G---PFIFNLGHGITPQVDPKNVLDLVKTVRS 343 (346)
Q Consensus 315 ~---~~I~nLGhGi~p~tp~eNv~~~v~~vr~ 343 (346)
T Consensus 320 gg~~~yIFNLGHGilP~~p~E~v~~lve~Vh~ 351 (351)
T TIGR01464 320 GGKSGYIFNLGHGILPETPPENVKALVEYVHS 351 (351)
T ss_pred CCCCCCEEECCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 89988587657778899897999999998529