HHsearch alignment for GI: 254780812 and conserved domain: cd03465
>cd03465 URO-D_like The URO-D _like protein superfamily includes bacterial and eukaryotic uroporphyrinogen decarboxylases (URO-D), coenzyme M methyltransferases and other putative bacterial methyltransferases. Uroporphyrinogen decarboxylase (URO-D) decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, an important branching point of the tetrapyrrole biosynthetic pathway. The methyltransferases represented here are important for ability of methanogenic organisms to use other compounds than carbon dioxide for reduction to methane.
Probab=100.00 E-value=0 Score=588.17 Aligned_cols=318 Identities=24% Similarity=0.387 Sum_probs=282.5
Q ss_pred HHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEECCHHHCCCEE
Q ss_conf 99669989999761462312345799999761553899842799999987212876298726521332001043244337
Q gi|254780812|r 10 EVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVR 89 (346)
Q Consensus 10 ~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~~ealG~~v~ 89 (346)
T Consensus 2 aAl~g~~~DRvPv~~~~~~~--~~e~~g~-----~~~e~~~d~~~~~e~~~~~~~~~~~D~~~i~~Di~~~~ea~G~~~~ 74 (330)
T cd03465 2 AALNGEKPDRVPVGPLLHGG--AAEFIGI-----SLKEYYTDPELGAEAQIALYKKFGPDAIKVFSDLFVEAEAFGAEIR 74 (330)
T ss_pred HHHCCCCCCCCCEEEECCCC--HHHHHCC-----CHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCEEE
T ss_conf 21164999988578866676--5988678-----8988866999999999999998098889705640267998497377
Q ss_pred EECCCCCCCC-CC-CCH-HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 3168875222-33-333-55420567012344323787778764210245320111147999999996124677652467
Q gi|254780812|r 90 FVENEGPRMD-PI-TTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166 (346)
Q Consensus 90 f~~~~GP~~~-p~-~~~-~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~~~~~ 166 (346)
T Consensus 75 ~~~~~~P~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~eai~~l~~~~~~~~plig~~ggP~Tla~~l~g------~~~~ 148 (330)
T cd03465 75 YPEDDTPSVEGPLIEDEEEDDDLLPPDPGDSPRLPELLEAIRLLKEELGDRVPVIGAVGGPFTLASLLMG------ASKF 148 (330)
T ss_pred ECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCC------HHHH
T ss_conf 6799898778888887888863379962255569999999999999728987479755657999887318------4899
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH--HCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEC
Q ss_conf 753013722289999999999999977777549816784383110--068356777612722689999863088623602
Q gi|254780812|r 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244 (346)
Q Consensus 167 ~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag--~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpiI~ 244 (346)
T Consensus 149 ~~~l~~~p~~~~~ll~~~t~~~~~~~~~qi~aGad~i~i~d~~a~~~~ls~~~f~~f~~p~~k~i~~~~~~~--~~~~il 226 (330)
T cd03465 149 LMLLYTDPELVHKLLEKCTEFIIRYADALIEAGADGIYISDPWASSSILSPEDFKEFSLPYLKKVFDAIKAL--GGPVIH 226 (330)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCEEE
T ss_conf 999997999999999999999999999999639988998356666556999999999899999999997754--998367
Q ss_pred CCC-CCCCCHHHHHCCCCCCEEECCCCCCHHHHHHH-CCCEEEECCCCHH-HH-CCCHHHHHHHHHHHHHHHCC--CCCE
Q ss_conf 431-10000134201478722304677998999970-7984696888846-77-09988999999999997325--9928
Q gi|254780812|r 245 FAK-GAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM-RL-VVGNQVMIDGVNAILDVLGS--GPFI 318 (346)
Q Consensus 245 f~~-g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~~-~~~~~lqGNldP~-~L-~~~~e~i~~~~~~~l~~~~~--~~~I 318 (346)
T Consensus 227 h~~g~~~~~l~~~~~-~~~~~~~~d~~~~l~~~~~~~~~~~~i~Gnldp~~~l~~gt~e~i~~~v~~~l~~~~~~~~g~I 305 (330)
T cd03465 227 HNCGDTAPILELMAD-LGADVFSIDVTVDLAEAKKKVGDKACLMGNLDPIDVLLNGSPEEIKEEVKELLEKLLKGGGGYI 305 (330)
T ss_pred ECCCCHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 407862879999986-5888898588899999999809992588179878987579999999999999998537999989
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9608976336688999999999973
Q gi|254780812|r 319 FNLGHGITPQVDPKNVLDLVKTVRS 343 (346)
Q Consensus 319 ~nLGhGi~p~tp~eNv~~~v~~vr~ 343 (346)
T Consensus 306 ~~~G~gi~~~tp~env~a~v~avre 330 (330)
T cd03465 306 LSSGCEIPPDTPIENIKAMIDAVRE 330 (330)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 8189987999999999999999629