HHsearch alignment of GI: 254780812 and MMDB domain: 1ad1_A_

>1ad1_A (A:) DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus}
Probab=92.79  E-value=0.85  Score=26.06  Aligned_cols=146  Identities=11%  Similarity=0.071  Sum_probs=74.3

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEC-C---CCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCC
Q ss_conf             9999999777775498167843-8---31100683567776127226899998630886236024311000013420147
Q gi|254780812|r  185 SDVSAEYLIAQIHAGVDVIQIF-D---THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT  260 (346)
Q Consensus       185 t~~~~~yl~~Qi~aGad~iqIF-D---s~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpiI~f~~g~~~~l~~~~~~~  260 (346)
                      .+.+.+.++.|+++|||+|-|- +   +.+..++++.-.+++.    .++++++..  ++|+..=+... ..++.-.+ .
T Consensus        25 ~~~~~~~a~~~~~~GAdiIDig~~st~P~~~~v~~~ee~~r~~----~vv~~i~~~--~vpisIDt~~~-~v~~~al~-~   96 (266)
T 1ad1_A           25 VESAVTRVKAMMDEGADIIDVGGVSTRPGHEMITVEEELNRVL----PVVEAIVGF--DVKISVDTFRS-EVAEACLK-L   96 (266)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHH----HHHHHHTTS--SSEEEEECSCH-HHHHHHHH-T
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCC----CCHHHHCCC--CCCCCEECCCH-HHHHHHHH-C
T ss_conf             9999999999998799899978861799998789999987317----711232145--75203003687-88999973-6


Q ss_pred             CCCEEE-CCCCC-C---HHHHHHHCCCEEEECC---CCHHHHCCCHHHHHHHHHHH---HHHHC-C-CCCEEEECCCCCC
Q ss_conf             872230-46779-9---8999970798469688---88467709988999999999---99732-5-9928960897633
Q gi|254780812|r  261 DSNAIG-LDWSV-P---LSFALELQKEGPVQGN---LDPMRLVVGNQVMIDGVNAI---LDVLG-S-GPFIFNLGHGITP  327 (346)
Q Consensus       261 g~d~is-iD~~~-d---l~~a~~~~~~~~lqGN---ldP~~L~~~~e~i~~~~~~~---l~~~~-~-~~~I~nLGhGi~p  327 (346)
                      |.+.+. +.-.. +   +.-+++.+..++++=+   -.|...   .+++....++.   +...+ . ...|+-.|.|-. 
T Consensus        97 G~~iINsisg~~~~~~~~~l~~~~~~~vv~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Gi~~~~IiiDPg~gf~-  172 (266)
T 1ad1_A           97 GVDIINDQWAGLYDHRMFQVVAKYDAEIVLMHNGNGNRDEPV---VEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFA-  172 (266)
T ss_dssp             TCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCCTTCCSCH---HHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS-
T ss_pred             CCCEEECCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCC---CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC-
T ss_conf             976751424344552045576404886156422035432111---0024667889999998511452358861576744-


Q ss_pred             CCCHHHHHHHHHHHH
Q ss_conf             668899999999997
Q gi|254780812|r  328 QVDPKNVLDLVKTVR  342 (346)
Q Consensus       328 ~tp~eNv~~~v~~vr  342 (346)
                      .+..+|...+.+..|
T Consensus       173 ~~~~~~~~~~~~~~~  187 (266)
T 1ad1_A          173 KTRNEEAEVMARLDE  187 (266)
T ss_dssp             CCHHHHHHHHHCHHH
T ss_pred             CCCHHHHHHHHHHHH
T ss_conf             231107999988777