HHsearch alignment of GI: 254780812 and MMDB domain: 2inf_A_1-330
>2inf_A (A:1-330) URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=0 Score=460.74 Aligned_cols=318 Identities=33% Similarity=0.562 Sum_probs=297.0
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCEEC
Q ss_conf 97605799999669989999761462312345799999761553899842799999987212876298726521332001
Q gi|254780812|r 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80 (346)
Q Consensus 1 M~~~~~~~l~al~g~~~~r~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlFsDIl~~ 80 (346)
||. ++|+++|++|+++||+|||+|+|+|+++|+|+..+..+ ++.++|++|++++++++.+.++||+|++.+++|+.++
T Consensus 11 mt~-rEr~~~~l~~~~~DrvPv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~ 88 (330)
T 2inf_A 11 ETF-NETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKY-GLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTP 88 (330)
T ss_dssp -CC-CCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSCEECCCCTTTT
T ss_pred CCC-HHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCC-CHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH
T ss_conf 113-38999997599899999898813453588999998629-9888865999999999979997299879841343113
Q ss_pred CHHHCCCEEEECCCCCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 0432443373168875222-333335542056701234432378777876421024532011114799999999612467
Q gi|254780812|r 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159 (346)
Q Consensus 81 ~ealG~~v~f~~~~GP~~~-p~~~~~~~~~~~~~~~~~~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~ 159 (346)
++++|+++.|.++.+|+++ |+.+.++....+. ....++++.+++|+++++++++ +++++|+++||||+|+++..+..
T Consensus 89 ~~~~G~~~~~~~~~~~~~~~~i~~~ed~~~l~~-~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~gP~t~a~~~~~~~~ 166 (330)
T 2inf_A 89 LPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQ-IDPEQDVPYVLETIKLLVNEQL-NVPLIGFSGAPFTLASYMTEGGP 166 (330)
T ss_dssp GGGGTCCEECCSSSCCEESSCCCSHHHHHTCCC-CCHHHHSHHHHHHHHHHHHHTC-SSCEEEEEECHHHHHHHHHHCSC
T ss_pred HHHHCCCEEECCCCCCCCCCCCHHHHHHHHCCC-CCHHHHCHHHHHHHHHHHHHCC-CCCCCCEECCHHHHHHHHHCCCC
T ss_conf 577466235427976555542015777640366-8878724034555665543105-64212641313666788862755
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCC
Q ss_conf 76524677530137222899999999999999777775498167843831100683567776127226899998630886
Q gi|254780812|r 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239 (346)
Q Consensus 160 sk~~~~~~~~~~~~p~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~ 239 (346)
.+++.+....|+++||.++++++++|+.+++|+++|+++|+|+++++|++++++||++|++|++||+||+++.+++. +
T Consensus 167 lrg~~~~~~~l~~~Pe~v~~ll~~~~~~~i~~~~~~~~~g~~~i~i~d~~~~~isp~~~~ef~~P~~k~i~~~i~~~--g 244 (330)
T 2inf_A 167 SKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--N 244 (330)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--C
T ss_pred CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHCCCCCHHHCCCCCCCCC--C
T ss_conf 20267877776526057899999999999999999985277622103827765226653010015001132111234--6
Q ss_pred CEEECCCCCCCCCHHHHHCCCCCCEEECCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCC-CCCE
Q ss_conf 236024311000013420147872230467799899997079846968888467709988999999999997325-9928
Q gi|254780812|r 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPFI 318 (346)
Q Consensus 240 vpiI~f~~g~~~~l~~~~~~~g~d~isiD~~~dl~~a~~~~~~~~lqGNldP~~L~~~~e~i~~~~~~~l~~~~~-~~~I 318 (346)
++++|||+++.+.++.+.+ .|+|++++|...+++.+++.+++++++||+||..|++++|+|+++|+++++.++. +|||
T Consensus 245 ~~~i~~~g~~~~~l~~l~~-~g~d~~~~~~~~~~~~~k~~g~~~~i~G~i~~~~l~gt~eev~~~v~~~l~~~~~~~gfI 323 (330)
T 2inf_A 245 VPLIMFGVGASHLAGDWHD-LPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFI 323 (330)
T ss_dssp SCEEEECTTCGGGHHHHHT-SSCSEEECCTTSCHHHHHHTTCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCHHHHHHHCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 4334444322122110125-675145125468869999738984688799957877999999999999999847899989
Q ss_pred EEECCCC
Q ss_conf 9608976
Q gi|254780812|r 319 FNLGHGI 325 (346)
Q Consensus 319 ~nLGhGi 325 (346)
+++||||
T Consensus 324 l~~gc~i 330 (330)
T 2inf_A 324 FNLGHGV 330 (330)
T ss_dssp BCBSSCC
T ss_pred EECCCCC
T ss_conf 9699983