HHsearch alignment of GI: 254780812 and MMDB domain: 2nq5_A_415-755

>2nq5_A (A:415-755) 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans}
Probab=100.00  E-value=8.9e-36  Score=271.67  Aligned_cols=304  Identities=12%  Similarity=0.044  Sum_probs=221.5

Q ss_pred             CCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEC----CCCEECCHHHCCCEEEECCCC
Q ss_conf             9761462312345799999761553899842799999987212876298726521----332001043244337316887
Q gi|254780812|r   20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILF----SDILVIADALGRNVRFVENEG   95 (346)
Q Consensus        20 ~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlF----sDIl~~~ealG~~v~f~~~~G   95 (346)
                      ++||-+.+..++...+...++...++.++++.|+.+++.+++..+++|+|....+    .|..........++.+.....
T Consensus         6 t~iGs~P~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   85 (341)
T 2nq5_A            6 TTIGSFPQSREIRRTRLAWKRGDISDAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKFGW   85 (341)
T ss_dssp             BCCSBCCC-----------------CHHHHHHHHHHHHHHHHHHHHHTCSBBCCBCTTCSCTTHHHHTTEEEEECCSSCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCC
T ss_conf             76568969889998999975589999999999999999999999984898773797001669999985056156204663


Q ss_pred             CCCCCCCCHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
Q ss_conf             5222333335542056701234-432378777876421024532011114799999999612467765246775301372
Q gi|254780812|r   96 PRMDPITTQEIYLLNPNIDLFL-NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS  174 (346)
Q Consensus        96 P~~~p~~~~~~~~~~~~~~~~~-~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~~~~~~~~~~~~p  174 (346)
                      +......    ....+...... ...+.+.++++.+++..  ++|++|+++||||+++++               +.++|
T Consensus        86 ~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~v~~~v~GP~tla~~~---------------~~~~~  144 (341)
T 2nq5_A           86 VQSYGSR----AVKPPIIYGDVQHLEPITVEETVYAQSLT--DRPVKGMLTGPITITNWS---------------FERTD  144 (341)
T ss_dssp             EEEETTE----EECCCEEEEEEEECSCSSHHHHHHHHHTC--SSCBEEEEECHHHHHHHS---------------BCCSS
T ss_pred             CCCCCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCHHHHHHHH---------------HCCCC
T ss_conf             5247863----12587663788689888799999999742--777644200147899986---------------22458


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHH---CCHHHHHHHHCCCHHHHHHHHHHHCCCCEEE-CCCCCC-
Q ss_conf             22899999999999999777775498167843831100---6835677761272268999986308862360-243110-
Q gi|254780812|r  175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHEFENYAARSVGRIISAVRRKYPNAKFI-SFAKGA-  249 (346)
Q Consensus       175 ~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~---Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpiI-~f~~g~-  249 (346)
                      +..+++++.+++++++|+++|+++|||+|||+|||++.   +++++|++|+.||+++|.+.+++....+.+. |+|.+. 
T Consensus       145 ~~~~~ll~~l~~~~~~~~~~~~~aGa~~I~idep~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ih~~~~~~~~  224 (341)
T 2nq5_A          145 IPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKF  224 (341)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEECCSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH
T ss_conf             99999999999999999999996799789964727751588433489999999999999997489978789998318877


Q ss_pred             CCCHHHHHCCCCCCEEECCCCCCHHHHHH-----HCCCEEEECCCCHHHH-CCCHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf             00013420147872230467799899997-----0798469688884677-09988999999999997325992896089
Q gi|254780812|r  250 GYMLKNYRRLTDSNAIGLDWSVPLSFALE-----LQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGH  323 (346)
Q Consensus       250 ~~~l~~~~~~~g~d~isiD~~~dl~~a~~-----~~~~~~lqGNldP~~L-~~~~e~i~~~~~~~l~~~~~~~~I~nLGh  323 (346)
                      ...+..+.+ +++|++|+||..+...+.+     ..++.+++||+||..+ .+++|+++++++++++.++..++|+|+||
T Consensus       225 ~~~~~~~~~-~~~d~i~~d~~~~~~~~~~~~~~~~~~~~v~~G~vd~~~~~~~~~e~i~~~v~~~~~~~~~~~~ils~~C  303 (341)
T 2nq5_A          225 DEIIDAIRA-LDADVISIETSRSHGDIIESFETAVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDC  303 (341)
T ss_dssp             STTHHHHHH-HCCSEEEC-------------------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSS
T ss_pred             HHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHEEECCCC
T ss_conf             999999983-8999899973698852458887379999799988837999999999999999999972898889987888


Q ss_pred             CCCCCCC---HHHHHHHHHHHHHCC
Q ss_conf             7633668---899999999997306
Q gi|254780812|r  324 GITPQVD---PKNVLDLVKTVRSEK  345 (346)
Q Consensus       324 Gi~p~tp---~eNv~~~v~~vr~~~  345 (346)
                      |+.+.||   .+|++++++++|.++
T Consensus       304 g~~~~~~~~~~~~l~~~~~~~~~~~  328 (341)
T 2nq5_A          304 GLKTRQEPETIAALKVLVAATKEVR  328 (341)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9998988999999999999999999