HHsearch alignment of GI: 254780812 and MMDB domain: 2nq5_A_415-755
>2nq5_A (A:415-755) 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans}
Probab=100.00 E-value=8.9e-36 Score=271.67 Aligned_cols=304 Identities=12% Similarity=0.044 Sum_probs=221.5
Q ss_pred CCCHHHHHCCCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEC----CCCEECCHHHCCCEEEECCCC
Q ss_conf 9761462312345799999761553899842799999987212876298726521----332001043244337316887
Q gi|254780812|r 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILF----SDILVIADALGRNVRFVENEG 95 (346)
Q Consensus 20 ~PVW~MrQAGrylpey~~~r~~~~~f~~~~~~pela~evtl~p~~r~~~DaaIlF----sDIl~~~ealG~~v~f~~~~G 95 (346)
++||-+.+..++...+...++...++.++++.|+.+++.+++..+++|+|....+ .|..........++.+.....
T Consensus 6 t~iGs~P~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 85 (341)
T 2nq5_A 6 TTIGSFPQSREIRRTRLAWKRGDISDAEYKQFIQAEIERWIRIQEDLDLDVLVHGEFERVDMVEFFGQKLAGFTTTKFGW 85 (341)
T ss_dssp BCCSBCCC-----------------CHHHHHHHHHHHHHHHHHHHHHTCSBBCCBCTTCSCTTHHHHTTEEEEECCSSCC
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCC
T ss_conf 76568969889998999975589999999999999999999999984898773797001669999985056156204663
Q ss_pred CCCCCCCCHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH
Q ss_conf 5222333335542056701234-432378777876421024532011114799999999612467765246775301372
Q gi|254780812|r 96 PRMDPITTQEIYLLNPNIDLFL-NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174 (346)
Q Consensus 96 P~~~p~~~~~~~~~~~~~~~~~-~~l~~v~eAi~~~k~~l~~~~pLIGF~GgP~TlasYmieG~~sk~~~~~~~~~~~~p 174 (346)
+...... ....+...... ...+.+.++++.+++.. ++|++|+++||||+++++ +.++|
T Consensus 86 ~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~~v~~~v~GP~tla~~~---------------~~~~~ 144 (341)
T 2nq5_A 86 VQSYGSR----AVKPPIIYGDVQHLEPITVEETVYAQSLT--DRPVKGMLTGPITITNWS---------------FERTD 144 (341)
T ss_dssp EEEETTE----EECCCEEEEEEEECSCSSHHHHHHHHHTC--SSCBEEEEECHHHHHHHS---------------BCCSS
T ss_pred CCCCCCC----CCCCCCCCCCCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCHHHHHHHH---------------HCCCC
T ss_conf 5247863----12587663788689888799999999742--777644200147899986---------------22458
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHH---CCHHHHHHHHCCCHHHHHHHHHHHCCCCEEE-CCCCCC-
Q ss_conf 22899999999999999777775498167843831100---6835677761272268999986308862360-243110-
Q gi|254780812|r 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHEFENYAARSVGRIISAVRRKYPNAKFI-SFAKGA- 249 (346)
Q Consensus 175 ~~~~~ll~~lt~~~~~yl~~Qi~aGad~iqIFDs~ag~---Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpiI-~f~~g~- 249 (346)
+..+++++.+++++++|+++|+++|||+|||+|||++. +++++|++|+.||+++|.+.+++....+.+. |+|.+.
T Consensus 145 ~~~~~ll~~l~~~~~~~~~~~~~aGa~~I~idep~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ih~~~~~~~~ 224 (341)
T 2nq5_A 145 IPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKF 224 (341)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCTTSEEEEEECCSCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH
T ss_conf 99999999999999999999996799789964727751588433489999999999999997489978789998318877
Q ss_pred CCCHHHHHCCCCCCEEECCCCCCHHHHHH-----HCCCEEEECCCCHHHH-CCCHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 00013420147872230467799899997-----0798469688884677-09988999999999997325992896089
Q gi|254780812|r 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALE-----LQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGH 323 (346)
Q Consensus 250 ~~~l~~~~~~~g~d~isiD~~~dl~~a~~-----~~~~~~lqGNldP~~L-~~~~e~i~~~~~~~l~~~~~~~~I~nLGh 323 (346)
...+..+.+ +++|++|+||..+...+.+ ..++.+++||+||..+ .+++|+++++++++++.++..++|+|+||
T Consensus 225 ~~~~~~~~~-~~~d~i~~d~~~~~~~~~~~~~~~~~~~~v~~G~vd~~~~~~~~~e~i~~~v~~~~~~~~~~~~ils~~C 303 (341)
T 2nq5_A 225 DEIIDAIRA-LDADVISIETSRSHGDIIESFETAVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDC 303 (341)
T ss_dssp STTHHHHHH-HCCSEEEC-------------------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSS
T ss_pred HHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHEEECCCC
T ss_conf 999999983-8999899973698852458887379999799988837999999999999999999972898889987888
Q ss_pred CCCCCCC---HHHHHHHHHHHHHCC
Q ss_conf 7633668---899999999997306
Q gi|254780812|r 324 GITPQVD---PKNVLDLVKTVRSEK 345 (346)
Q Consensus 324 Gi~p~tp---~eNv~~~v~~vr~~~ 345 (346)
|+.+.|| .+|++++++++|.++
T Consensus 304 g~~~~~~~~~~~~l~~~~~~~~~~~ 328 (341)
T 2nq5_A 304 GLKTRQEPETIAALKVLVAATKEVR 328 (341)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9998988999999999999999999