HHSEARCH alignment of GI: 254780812 and SCOP domain: d2tpsa_

Alignment

Probab=90.31  E-value=0.61  Score=24.29  Aligned_cols=47  Identities=17%  Similarity=0.258  Sum_probs=29.3

Q ss_pred             HHHHHHCCCCEEEECCCCHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEC
Q ss_conf             77777549816784383110068356777612722689999863088623602
Q gi|254780812|r  192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS  244 (346)
Q Consensus       192 l~~Qi~aGad~iqIFDs~ag~Ls~~~f~~f~~p~~kkI~~~ik~~~~~vpiI~  244 (346)
                      ++.-+++|++.||+-|..+..++.+.+.+.+    +++.+.+++.  ++++|.
T Consensus        36 v~~al~~Gv~~iqlR~K~~~~~~~~~~~~~a----~~l~~lc~~~--~~~liI   82 (226)
T d2tpsa_          36 VQKALKGGATLYQFREKGGDALTGEARIKFA----EKAQAACREA--GVPFIV   82 (226)
T ss_dssp             HHHHHHHTCSEEEECCCSTTCCCHHHHHHHH----HHHHHHHHHH--TCCEEE
T ss_pred             HHHHHHCCCCEEEECCCCCCCHHHHHHHHHH----HHHHHHHHHH--CCEEEE
T ss_conf             9999987997999828996503379999999----9999999981--986998

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Thiamin phosphate synthase
family: Thiamin phosphate synthase
domain: Thiamin phosphate synthase
species: Bacillus subtilis [TaxId: 1423]