BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780812|ref|YP_003065225.1| uroporphyrinogen decarboxylase
[Candidatus Liberibacter asiaticus str. psy62]
(346 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780812|ref|YP_003065225.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040489|gb|ACT57285.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 346
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL
Sbjct: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL
Sbjct: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL
Sbjct: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA
Sbjct: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV
Sbjct: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI
Sbjct: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
>gi|315122035|ref|YP_004062524.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495437|gb|ADR52036.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 346
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/345 (83%), Positives = 314/345 (91%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN++KQKIL+VL+GN+I PPPIWLMRQAGRYLPEYR+IRKK KNFL+MCYTPEY VE+T+
Sbjct: 1 MNKQKQKILQVLKGNIITPPPIWLMRQAGRYLPEYREIRKKNKNFLNMCYTPEYVVEITM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPI RY FDAAILFSDILVI DALGRNVRF+ENEGP+MDPIT +EIY LNPNID LNYL
Sbjct: 61 QPIHRYKFDAAILFSDILVIPDALGRNVRFIENEGPKMDPITVKEIYGLNPNIDFILNYL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
IF+SISILRKKLPN+ITLIGFCGAPWTVASYMISG KDH + R+FAYQN+ AFNWL
Sbjct: 121 SSIFKSISILRKKLPNNITLIGFCGAPWTVASYMISGCPTKDHTETRIFAYQNNHAFNWL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LDFLSD+SAEYLIAQI +GVDVIQIFDTHAG LGE EFENYAA+ VGRIISAVR+K PNA
Sbjct: 181 LDFLSDISAEYLIAQIRSGVDVIQIFDTHAGFLGECEFENYAAKPVGRIISAVRKKCPNA 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGYMLKNYR+LTDSNAI LDWSVPLSFA +LQKEGPVQGNLDPMRLVVGN+V
Sbjct: 241 QIITFAKGAGYMLKNYRQLTDSNAISLDWSVPLSFAFDLQKEGPVQGNLDPMRLVVGNKV 300
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
M DGV AILD LGSGP IFNLGHGITPQVDPKNVLDLV+TVRS K
Sbjct: 301 MKDGVKAILDTLGSGPLIFNLGHGITPQVDPKNVLDLVETVRSGK 345
>gi|227823859|ref|YP_002827832.1| uroporphyrinogen decarboxylase [Sinorhizobium fredii NGR234]
gi|254767702|sp|C3MB70|DCUP_RHISN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|227342861|gb|ACP27079.1| uroporphyrinogen decarboxylase [Sinorhizobium fredii NGR234]
Length = 344
Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/345 (62%), Positives = 265/345 (76%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++K+LEVL G + PPPIWLMRQAGRYLPEYR R K +FLD+CYTP+ VE+TL
Sbjct: 1 MAETRRKVLEVLNGKSLTPPPIWLMRQAGRYLPEYRATRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DAL RNVRF E GPRMDPI T I L D L++L
Sbjct: 61 QPIRRYAFDAAILFSDILVIPDALHRNVRFEEGHGPRMDPIDTDGIAGLK--ADGILSHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F++++ LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 SPVFETVARLRRELPEETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFEEL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L FL+DVSA+YL+AQI AG D +QIFD+ AG LGE EF +A V R+I++VR + P+A
Sbjct: 179 LAFLADVSADYLVAQIDAGADAVQIFDSWAGVLGEDEFARFAVEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LK+YRRLT ++AIGLDW+VPL+FA ELQK+GPVQGNLDPMR+V G
Sbjct: 239 KIIAFAKGAGLLLKDYRRLTGADAIGLDWAVPLAFAAELQKDGPVQGNLDPMRVVAGGGA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
M G++ ILDVLG+GP IFNLGHGITP+ DP+NV LV VR K
Sbjct: 299 MESGIDRILDVLGNGPLIFNLGHGITPEADPENVSALVARVRGTK 343
>gi|307316113|ref|ZP_07595557.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti AK83]
gi|306897953|gb|EFN28695.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti AK83]
Length = 343
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/345 (60%), Positives = 258/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +K+LEVL G + PPPIWLMRQAGRYLPEYR +R K +FLD+CYTP+ VE+TL
Sbjct: 1 MSETHRKVLEVLSGRALTPPPIWLMRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI D L RNVRF E +GPRMDPI I L+P D + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDGLKRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRRELPTETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI AG D +QIFD+ AG LGE EF+ +A V R+I++VR + P+A
Sbjct: 179 LTLLADISADYLVKQIDAGADAVQIFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDW VPL+FA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGLLLKNYRQATGADAIGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGTA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + ILDVLG GP IFNLGHGITP DP +V LV VR +
Sbjct: 299 QEHGTDRILDVLGQGPLIFNLGHGITPDADPNHVAALVARVRGSR 343
>gi|307302556|ref|ZP_07582313.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti BL225C]
gi|306903226|gb|EFN33816.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti BL225C]
Length = 343
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 207/345 (60%), Positives = 258/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +K+LEVL G + PPPIWLMRQAGRYLPEYR +R K +FLD+CYTP+ VE+TL
Sbjct: 1 MSETHRKVLEVLSGRALTPPPIWLMRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI D L RNVRF E +GPRMDPI I L+P D + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDGLKRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRRELPTETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI AG D +QIFD+ AG LGE EF+ +A V R+I++VR + P+A
Sbjct: 179 LTLLADISADYLVKQIDAGADAVQIFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDW VPL+FA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGLLLKNYRQATGADAIGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + ILDVLG GP IFNLGHGITP DP +V LV VR +
Sbjct: 299 QEHGTDRILDVLGQGPLIFNLGHGITPDADPNHVAALVARVRGSR 343
>gi|116254466|ref|YP_765604.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv. viciae
3841]
gi|123081718|sp|Q1MA15|DCUP_RHIL3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115259114|emb|CAK10225.2| putative uroporphyrinogen decarboxylase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 343
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/343 (60%), Positives = 263/343 (76%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTPE+ VE+TL
Sbjct: 1 MSDTGRKIMRVLSGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPEHAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGSLNG--EEVVDYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY+++RAF L
Sbjct: 119 RPVLETVRRLREELPAETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHARAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVSA+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P+A
Sbjct: 179 LMLLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAIRPVARMIASVKSRRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G +
Sbjct: 239 RIIAFAKGAGYQLKTYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G++ IL LG+GP IFNLGHGITPQ DP++V LV VR
Sbjct: 299 LEEGIDDILQHLGNGPLIFNLGHGITPQADPEHVRLLVDRVRG 341
>gi|15890080|ref|NP_355761.1| uroporphyrinogen decarboxylase [Agrobacterium tumefaciens str. C58]
gi|23813934|sp|Q8UBL6|DCUP_AGRT5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|15158065|gb|AAK88546.1| uroporphyrinogen decarboxylase [Agrobacterium tumefaciens str. C58]
Length = 344
Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/343 (60%), Positives = 256/343 (74%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ERK ++ VL G + PPPIWLMRQAGRYLPEYR+ RK +FLD+CY PE E+TL
Sbjct: 1 MSERK--VMTVLNGKTVTPPPIWLMRQAGRYLPEYRETRKSAGSFLDLCYNPELASEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ DAAILFSDILVI DAL RNV F E +GP MDPI I L+ + + +L
Sbjct: 59 QPIRRFGLDAAILFSDILVIPDALHRNVSFSEGKGPAMDPIDISGIEKLDASD--VMAHL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR LP+ TL+GFCGAPWTVA+YMI+G D R+F YQ A L
Sbjct: 117 SPVFETVSRLRTSLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFGYQEPAAMEKL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L++VSA+YL+AQI AG D +QIFD+ AG LGE EFE YA + V RII++VR + P+A
Sbjct: 177 LALLAEVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEEYAIKPVARIIASVRARRPSA 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAGY+L++YRR T +NAIGLDWSVPLSFA +LQKEGPVQGNLDPM +V G +
Sbjct: 237 KIIAFAKGAGYLLRDYRRKTGANAIGLDWSVPLSFARDLQKEGPVQGNLDPMLMVAGGKA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ DG++A+L LG GP IFNLGHGITPQ DP+NV LV+ VRS
Sbjct: 297 LQDGIDAVLQSLGQGPLIFNLGHGITPQADPENVTRLVQRVRS 339
>gi|222150249|ref|YP_002551206.1| uroporphyrinogen decarboxylase [Agrobacterium vitis S4]
gi|221737231|gb|ACM38194.1| uroporphyrinogen decarboxylase [Agrobacterium vitis S4]
Length = 346
Score = 438 bits (1126), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/344 (61%), Positives = 260/344 (75%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ +K+L+VL+G ++PPPIWLMRQAGRYLPEYRQ R + +FLD+CY+PE E+TL
Sbjct: 3 LSAENRKVLKVLEGQSLSPPPIWLMRQAGRYLPEYRQTRAQAGSFLDLCYSPELATEVTL 62
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DAL RNV F E +GP M PIT EI L P +F +L
Sbjct: 63 QPIRRYAFDAAILFSDILVIPDALNRNVTFTEGKGPEMTPITADEILAL-PEQSVF-PHL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++S LR+ LP+ TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 121 NPVIETVSRLRQTLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRHRQAFLRL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D+SAEYL AQI AG D +QIFD+ AG LGE EF ++ + V RII +R P+A
Sbjct: 181 LDHLADLSAEYLQAQIDAGADAVQIFDSWAGVLGEEEFADFCVKPVKRIIDKLRLSRPDA 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K ISFAKGAG +LK+YRR T ++AIGLDWSVPLSFA ELQK+GPVQGNLDPM V G Q
Sbjct: 241 KIISFAKGAGTLLKDYRRRTGADAIGLDWSVPLSFAAELQKDGPVQGNLDPMLAVAGGQA 300
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
M DG++ ILD LG+GP IFNLGHGITPQ DP+ V +LV+ VR +
Sbjct: 301 MRDGIDRILDRLGTGPLIFNLGHGITPQADPETVRELVQHVRQK 344
>gi|150398400|ref|YP_001328867.1| uroporphyrinogen decarboxylase [Sinorhizobium medicae WSM419]
gi|171460833|sp|A6UEF2|DCUP_SINMW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150029915|gb|ABR62032.1| uroporphyrinogen decarboxylase [Sinorhizobium medicae WSM419]
Length = 343
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/345 (60%), Positives = 257/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ +K+LEVL G + PPPIWLMRQAGRYLPEYR R K +FLD+CYTPE VE+TL
Sbjct: 1 MSGTHRKVLEVLNGRSLTPPPIWLMRQAGRYLPEYRATRIKAGSFLDLCYTPELAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILV+ DAL RNVRF E +GPRMDPI I L+ + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVVPDALNRNVRFEEGQGPRMDPIDEDGIAQLSQT--GVIEHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR +L ITL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRGELAAEITLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI G D +QIFD+ AG LGE EF+ YA V RII++VR + P+A
Sbjct: 179 LALLADISADYLVEQIDRGADAVQIFDSWAGVLGEEEFQRYAVEPVRRIIASVRSRRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDWSVPLSFA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGILLKNYRQATGADAIGLDWSVPLSFAAELQKDGPVQGNLDPVRVVAGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ ILDVLG GP IFNLGHGITP DP++V LV VR +
Sbjct: 299 LEHGIDRILDVLGQGPLIFNLGHGITPDADPEHVAALVSRVRGRR 343
>gi|209551505|ref|YP_002283422.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537261|gb|ACI57196.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 340
Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/338 (60%), Positives = 259/338 (76%), Gaps = 2/338 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL+G ++PPP+WLMRQAGRYLPEYRQ R K +FLD+CYTP++ VE+TLQPIRRY F
Sbjct: 1 MRVLEGESLSPPPLWLMRQAGRYLPEYRQTRAKAGSFLDLCYTPDHAVEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL P+ +++
Sbjct: 61 DAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLNG--EEVVDYLRPVLETVR 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY++ RAF LL L+DVS
Sbjct: 119 RLRQELPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHPRAFEQLLMLLADVS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P A+ I+FAKG
Sbjct: 179 ADYLVAQIDAGADAVQIFDSWAGVLGEREFEAFAIRPVARMIASVKSRRPQARIIAFAKG 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
AGY LKNYR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ I
Sbjct: 239 AGYQLKNYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
L LG GP IFNLGHGITPQ DP++V LV VR ++
Sbjct: 299 LQHLGQGPLIFNLGHGITPQADPEHVRLLVDRVRGGQM 336
>gi|218516998|ref|ZP_03513838.1| uroporphyrinogen decarboxylase [Rhizobium etli 8C-3]
Length = 338
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/339 (59%), Positives = 258/339 (76%), Gaps = 2/339 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ ++KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TL
Sbjct: 1 MSDTRRKIMRVLDGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + + YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIARLNG--EEVVAYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR+ LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ RAF L
Sbjct: 119 RPVLETVRRLREALPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKYPRAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVSA+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++++ + P+A
Sbjct: 179 LMLLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFALRPVARMIASIKSQRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G +
Sbjct: 239 RIIAFAKGAGYQLKAYRQKTGADAIGLDWSVPLTFAAELQKDGPVQGNLDPMRVVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+ +G++ IL LG GP IFNLGHGITPQ DP +V LV+
Sbjct: 299 LEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVE 337
>gi|325294205|ref|YP_004280069.1| uroporphyrinogen decarboxylase [Agrobacterium sp. H13-3]
gi|325062058|gb|ADY65749.1| uroporphyrinogen decarboxylase [Agrobacterium sp. H13-3]
Length = 390
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/343 (59%), Positives = 255/343 (74%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ERK +L+VL G + PPPIWLMRQAGRYLPEYR+ RK +FLD+CY PE E+TL
Sbjct: 47 MSERK--VLKVLNGQTVTPPPIWLMRQAGRYLPEYRETRKNAGSFLDLCYNPELATEVTL 104
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ DAAILFSDILVI D L RNV F E +GP MDPI I L+ + + +L
Sbjct: 105 QPIRRFGLDAAILFSDILVIPDGLDRNVSFSEGKGPAMDPIDVDGIDRLDASN--VIAHL 162
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR LP+ TL+GFCGAPWTVA+YMI+G D R+F Y+ A L
Sbjct: 163 SPVFETVSRLRHTLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFGYREPAAMEKL 222
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L++VSA+YL+AQI AG D +QIFD+ AG LGE EFE YA + V RII++VR + P+A
Sbjct: 223 LALLAEVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEEYAVKPVARIIASVRARRPSA 282
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAGY+LK+YRR T ++AIGLDWSVPL FA +LQKEGPVQGNLDPM +V G +
Sbjct: 283 KIIAFAKGAGYLLKDYRRKTGADAIGLDWSVPLGFARDLQKEGPVQGNLDPMLMVAGGKA 342
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ DG++A+L LG GP IFNLGHGITPQ DP+NV LV+ VR+
Sbjct: 343 LEDGIDAVLQALGQGPLIFNLGHGITPQADPENVARLVQRVRA 385
>gi|241206943|ref|YP_002978039.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860833|gb|ACS58500.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 335
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 2/335 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP++ VE+TLQPIRRY F
Sbjct: 1 MRVLSGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDHAVEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL P+ +++
Sbjct: 61 DAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLNG--EEVVDYLRPVLETVR 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ RAF LL L+DVS
Sbjct: 119 RLREELPVETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRHPRAFEHLLMLLADVS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P+A+ I+FAKG
Sbjct: 179 ADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAVRPVARMIASVKSQRPHARIIAFAKG 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
AGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + DG++ I
Sbjct: 239 AGYQLKTYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEDGIDDI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L LG+GP IFNLGHGITPQ DP++V LV VR
Sbjct: 299 LQHLGNGPLIFNLGHGITPQADPEHVRLLVDRVRG 333
>gi|218459965|ref|ZP_03500056.1| uroporphyrinogen decarboxylase [Rhizobium etli Kim 5]
Length = 320
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/322 (60%), Positives = 243/322 (75%), Gaps = 2/322 (0%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TLQPIRRY FDAAILFSDILVI DA
Sbjct: 1 MMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTLQPIRRYGFDAAILFSDILVIPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
+ RNVRF E GP MDPI I LN + + YL P+ +++ LR++LP+ TL+GF
Sbjct: 61 MKRNVRFTEGHGPEMDPIDEAGIGRLNG--EEVVAYLRPVLETVRRLREELPDETTLLGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA+YMI+G D R+FAY RAF LL L+DVS++YL+AQI AG D +
Sbjct: 119 CGAPWTVATYMIAGHGTPDQAPARLFAYNYPRAFEHLLMLLADVSSDYLVAQIDAGADAV 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ AG LGE EFE +A R V R+I++++ + P+A+ I+FAKGAGY LK YR+ T ++
Sbjct: 179 QIFDSWAGVLGEREFEAFAIRPVARMIASIKSRRPHARIIAFAKGAGYQLKTYRQKTGAD 238
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +GV+ IL LG GP IFNLGH
Sbjct: 239 AIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGVDDILQHLGHGPLIFNLGH 298
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
GITPQ DP +V LV+ VR K
Sbjct: 299 GITPQADPDHVRQLVERVRGTK 320
>gi|190893982|ref|YP_001980524.1| uroporphyrinogen decarboxylase [Rhizobium etli CIAT 652]
gi|190699261|gb|ACE93346.1| uroporphyrinogen decarboxylase protein [Rhizobium etli CIAT 652]
Length = 319
Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/319 (60%), Positives = 241/319 (75%), Gaps = 2/319 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TLQPIRRY FDAAILFSDILVI DA+
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTLQPIRRYGFDAAILFSDILVIPDAM 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E GP MDPI I LN + + YL P+ +++ LR+ LP+ TL+GFC
Sbjct: 61 KRNVRFTEGHGPEMDPIDEAGIARLNG--EEVVAYLRPVLETVRRLREALPDETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY+ RAF LL L+DVSA+YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFAYKYPRAFEHLLMLLADVSADYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EFE +A R V R+I++++ + P+A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFEAFALRPVARMIASIKSQRPHARIIAFAKGAGYQLKAYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ IL LG GP IFNLGHG
Sbjct: 239 IGLDWSVPLTFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDILQHLGHGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRS 343
ITPQ DP +V LV+ VR
Sbjct: 299 ITPQADPDHVRQLVERVRG 317
>gi|15967094|ref|NP_387447.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti 1021]
gi|15076367|emb|CAC47920.1| Probable uroporphyrinogen decarboxylase [Sinorhizobium meliloti
1021]
Length = 319
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/321 (60%), Positives = 240/321 (74%), Gaps = 2/321 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR +R K +FLD+CYTP+ VE+TLQPIRRY FDAAILFSDILVI D L
Sbjct: 1 MRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTLQPIRRYGFDAAILFSDILVIPDGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E +GPRMDPI I L+P D + +L P+F+++S LR++LP TL+GFC
Sbjct: 61 KRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHLAPVFETVSRLRRELPTETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY++ +AF LL L+D+SA+YL+ QI AG D +Q
Sbjct: 119 GAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERLLTLLADISADYLVKQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EF+ +A V R+I++VR + P+AK I+FAKGAG +LKNYR+ T ++A
Sbjct: 179 IFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSAKIIAFAKGAGLLLKNYRQATGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDW VPL+FA ELQK+GPVQGNLDP+R+V G G + ILDVLG GP IFNLGHG
Sbjct: 239 IGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGAAQEHGTDRILDVLGQGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEK 345
ITP DP +V LV VR +
Sbjct: 299 ITPDADPNHVAALVARVRGSR 319
>gi|86359704|ref|YP_471596.1| uroporphyrinogen decarboxylase [Rhizobium etli CFN 42]
gi|86283806|gb|ABC92869.1| uroporphyrinogen decarboxylase protein [Rhizobium etli CFN 42]
Length = 323
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 244/322 (75%), Gaps = 2/322 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CYTP++ VE+TLQPIRRY FDAAILFSDILVI DA+
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYTPDHAVEVTLQPIRRYGFDAAILFSDILVIPDAM 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E GP MDPI I LN D ++YL P+ +++ LR +LP L+GFC
Sbjct: 61 KRNVRFTEGHGPEMDPIDEAGIGRLNG--DEVVDYLRPVLETVRRLRHELPEETALLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY++ RAF LL L+DVSA+YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFAYEHPRAFEHLLMLLADVSADYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EF+ +A + V R+I++++ + P A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFDAFAVKPVARMIASIKARRPQARVIAFAKGAGYQLKTYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ IL LG+GP IFNLGHG
Sbjct: 239 IGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDILHHLGNGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEKI 346
ITPQ DP++V LV+ VR ++
Sbjct: 299 ITPQADPEHVRMLVERVRGSRM 320
>gi|222087932|ref|YP_002546470.1| uroporphyrinogen decarboxylase [Agrobacterium radiobacter K84]
gi|221725380|gb|ACM28536.1| uroporphyrinogen decarboxylase [Agrobacterium radiobacter K84]
Length = 320
Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/321 (58%), Positives = 238/321 (74%), Gaps = 2/321 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CY+PE+ VE+T+QPIRRY FDAAI+FSDILVI D L
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYSPEHAVEVTMQPIRRYGFDAAIMFSDILVIPDGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVR+ E GP+MDPI I+ L + + YL P+ +++ LR +LP TL+GFC
Sbjct: 61 NRNVRYTEGHGPQMDPIDEAGIFALK--AEGVVEYLAPVMETLRRLRAELPEETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+F Y++ +A LL L+D+SA YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFGYRHPKALEHLLMLLADISAAYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EFE +A + V RII++V+ + P A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFEAFAVKPVARIIASVKAQRPEARIIAFAKGAGYQLKTYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQ+EGPVQGNLDPMR+V G + + DG++ IL LG GP IFNLGHG
Sbjct: 239 IGLDWSVPLAFARELQREGPVQGNLDPMRVVAGGKALEDGIDEILQQLGHGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEK 345
ITPQ DP NV LV+ VR K
Sbjct: 299 ITPQADPANVTALVQRVRGWK 319
>gi|163757469|ref|ZP_02164558.1| uroporphyrinogen decarboxylase [Hoeflea phototrophica DFL-43]
gi|162284971|gb|EDQ35253.1| uroporphyrinogen decarboxylase [Hoeflea phototrophica DFL-43]
Length = 347
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/342 (53%), Positives = 244/342 (71%), Gaps = 2/342 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N +K+++VL G + PPP+WLMRQAGRYLPEYR+ R K FL++CYTP+ VE+TLQ
Sbjct: 4 NVGDRKVMKVLAGETVFPPPVWLMRQAGRYLPEYRKTRATAKGFLNLCYTPDLAVEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
PIRRY FDAAILFSDILVI DAL RNV FVE EGP+MDPI + I L+ + ++L
Sbjct: 64 PIRRYGFDAAILFSDILVIPDALDRNVHFVEGEGPKMDPIAPEAIARLDAS--GMHDHLA 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+++++ LR +LP TL+GFCGAPWTVA+YMI+G D R+FA Q++ F L+
Sbjct: 122 PVYETVRRLRAELPQETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAMQHAEEFKMLI 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+++S +YLIAQI AG D +QIFD+ AG L E +F++Y+ + V R++ + R+ P
Sbjct: 182 DRLTEISTDYLIAQIDAGADAVQIFDSWAGVLSEVDFQSYSVQPVKRMVERINRERPGVP 241
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I FAKGAG +L+NYR T N +GLDW+VP S A +QK G VQGNLDP+R++ G +
Sbjct: 242 VIGFAKGAGALLENYREETGVNCVGLDWTVPASLARRIQKGGAVQGNLDPLRVIAGGSAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+GV+ +L+ LG GP IFNLGHGITPQ DP+NV L+ +R
Sbjct: 302 DEGVDLVLETLGEGPLIFNLGHGITPQADPENVTRLMNRIRG 343
>gi|239833107|ref|ZP_04681436.1| uroporphyrinogen decarboxylase [Ochrobactrum intermedium LMG 3301]
gi|239825374|gb|EEQ96942.1| uroporphyrinogen decarboxylase [Ochrobactrum intermedium LMG 3301]
Length = 352
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 242/344 (70%), Gaps = 2/344 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ K+K+L V+ G I PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQ
Sbjct: 10 KDMKRKVLRVIDGEAIFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQ 69
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
PIRR+ FDAAILFSDILVI ALGR++RF E GP M PI EI+ L + L
Sbjct: 70 PIRRFGFDAAILFSDILVIPHALGRDLRFEEGRGPLMTPIDADEIFWLE--TEGVAKRLE 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+++++ +LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL
Sbjct: 128 PVYETVRLLREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + + V RI+ VR YP A+
Sbjct: 188 NDLADVSAEYLIEQLDAGADAVQIFDSWSGVLDEDCFERFCIQPVARIVQKVRAVYPEAR 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F KGAG + YR T +A+GLDWSVPLSFA LQ EG +QGNLDP+R+V G +
Sbjct: 248 IIGFPKGAGMLYAGYREKTGVDALGLDWSVPLSFAASLQNEGAIQGNLDPLRVVAGGNAL 307
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+GV+AIL+ LG GP IFNLGHGITPQ +NV ++ +R K
Sbjct: 308 DEGVDAILERLGHGPLIFNLGHGITPQAPVENVQRMIDRIRGGK 351
>gi|153008190|ref|YP_001369405.1| uroporphyrinogen decarboxylase [Ochrobactrum anthropi ATCC 49188]
gi|166234264|sp|A6WX72|DCUP_OCHA4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151560078|gb|ABS13576.1| uroporphyrinogen decarboxylase [Ochrobactrum anthropi ATCC 49188]
Length = 341
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/341 (54%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+K+L V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 KRKVLRVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILVI ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVIPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLLREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLDAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPEARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T +A+GLDWSVP SFA LQ+EG +QGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDALGLDWSVPFSFAAALQEEGAIQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ IL+ LG GP IFNLGHGITPQ +NV ++ +R K
Sbjct: 300 VDTILERLGQGPLIFNLGHGITPQAPIENVQRMIDRIRGGK 340
>gi|114705850|ref|ZP_01438753.1| uroporphyrinogen decarboxylase [Fulvimarina pelagi HTCC2506]
gi|114538696|gb|EAU41817.1| uroporphyrinogen decarboxylase [Fulvimarina pelagi HTCC2506]
Length = 339
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/343 (54%), Positives = 242/343 (70%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ERK +++VL+G + PPPIWLMRQAGRYLPEYR+ R + FLD+CY P++ E+TL
Sbjct: 1 MAERK--LVKVLEGETVGPPPIWLMRQAGRYLPEYRETRAQAGGFLDLCYNPDFATEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDA+ILFSDILVI DAL R V+FV+ EGP M+PI EI L+P+ L +L
Sbjct: 59 QPIRRFGFDASILFSDILVIPDALQRGVKFVKGEGPMMNPIRPDEIDRLDPS--LAETHL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP TLIGFCGAPWTVA+YMI+G D R+F Y N A L
Sbjct: 117 APVIATVARLREELPEETTLIGFCGAPWTVATYMIAGHGTPDQAPARMFGYHNPEAMAQL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+++SA+YLI Q+ AG D +QIFD+ AG L E F +YA V I+ VR P+A
Sbjct: 177 LTLLAEMSADYLIRQLRAGADCVQIFDSWAGVLDEQSFADYAVAPVKLIVDRVRAAIPDA 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I FAKGAGY LK YR+ T +A+G+DW VPL+FA ELQ +G VQGNLDP+RL+ G +
Sbjct: 237 KIIGFAKGAGYRLKTYRQETGVDALGMDWQVPLAFAKELQADGAVQGNLDPLRLIAGGRA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+ IL+ L GPFIFNLGHGITP ++V L+K +R
Sbjct: 297 LDEGVDLILEALSDGPFIFNLGHGITPDAPIEHVERLLKRIRG 339
>gi|225626446|ref|ZP_03784485.1| uroporphyrinogen decarboxylase [Brucella ceti str. Cudo]
gi|260169474|ref|ZP_05756285.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
gi|261759000|ref|ZP_06002709.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
gi|225618103|gb|EEH15146.1| uroporphyrinogen decarboxylase [Brucella ceti str. Cudo]
gi|261738984|gb|EEY26980.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
Length = 341
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 243/340 (71%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
++FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FSFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|256112390|ref|ZP_05453311.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
gi|265993827|ref|ZP_06106384.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
gi|262764808|gb|EEZ10729.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
Length = 341
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/339 (54%), Positives = 241/339 (71%), Gaps = 2/339 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR+
Sbjct: 4 KVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++++
Sbjct: 64 GFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYET 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+D
Sbjct: 122 VRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLAD 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
VSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 182 VSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV+
Sbjct: 242 KGAGMLYAGYREKTSVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGVD 301
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 302 AILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|23502914|ref|NP_699041.1| uroporphyrinogen decarboxylase [Brucella suis 1330]
gi|62290910|ref|YP_222703.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 1 str. 9-941]
gi|82700821|ref|YP_415395.1| uroporphyrinogen decarboxylase [Brucella melitensis biovar Abortus
2308]
gi|161619980|ref|YP_001593867.1| uroporphyrinogen decarboxylase [Brucella canis ATCC 23365]
gi|163844084|ref|YP_001628488.1| uroporphyrinogen decarboxylase [Brucella suis ATCC 23445]
gi|189025123|ref|YP_001935891.1| uroporphyrinogen decarboxylase [Brucella abortus S19]
gi|237816416|ref|ZP_04595409.1| uroporphyrinogen decarboxylase [Brucella abortus str. 2308 A]
gi|254690199|ref|ZP_05153453.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|254696316|ref|ZP_05158144.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|254705069|ref|ZP_05166897.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|254707414|ref|ZP_05169242.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|254709044|ref|ZP_05170855.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|254731232|ref|ZP_05189810.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|256030569|ref|ZP_05444183.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|256258453|ref|ZP_05463989.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|256370464|ref|YP_003107975.1| uroporphyrinogen decarboxylase [Brucella microti CCM 4915]
gi|260546172|ref|ZP_05821912.1| uroporphyrinogen decarboxylase [Brucella abortus NCTC 8038]
gi|260567463|ref|ZP_05837933.1| uroporphyrinogen decarboxylase [Brucella suis bv. 4 str. 40]
gi|260755739|ref|ZP_05868087.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|260758963|ref|ZP_05871311.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|260760687|ref|ZP_05873030.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|260884765|ref|ZP_05896379.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|261314899|ref|ZP_05954096.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|261316542|ref|ZP_05955739.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|261755771|ref|ZP_05999480.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|265987616|ref|ZP_06100173.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|297247294|ref|ZP_06931012.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 5 str. B3196]
gi|38257629|sp|Q8FY24|DCUP_BRUSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|75505188|sp|Q57AJ2|DCUP_BRUAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123547320|sp|Q2YR07|DCUP_BRUA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189082868|sp|A9M9E9|DCUP_BRUC2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189082869|sp|B0CJG6|DCUP_BRUSI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058004|sp|B2S965|DCUP_BRUA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|23348946|gb|AAN30956.1| uroporphyrinogen decarboxylase [Brucella suis 1330]
gi|62197042|gb|AAX75342.1| HemE, uroporphyrinogen decarboxylase [Brucella abortus bv. 1 str.
9-941]
gi|82616922|emb|CAJ12023.1| Uroporphyrinogen decarboxylase (URO-D):Uroporphyrinogen
decarboxylase HemE [Brucella melitensis biovar Abortus
2308]
gi|161336791|gb|ABX63096.1| uroporphyrinogen decarboxylase [Brucella canis ATCC 23365]
gi|163674807|gb|ABY38918.1| uroporphyrinogen decarboxylase [Brucella suis ATCC 23445]
gi|189020695|gb|ACD73417.1| Uroporphyrinogen decarboxylase (URO-D) [Brucella abortus S19]
gi|237788483|gb|EEP62698.1| uroporphyrinogen decarboxylase [Brucella abortus str. 2308 A]
gi|256000627|gb|ACU49026.1| uroporphyrinogen decarboxylase [Brucella microti CCM 4915]
gi|260096279|gb|EEW80155.1| uroporphyrinogen decarboxylase [Brucella abortus NCTC 8038]
gi|260156981|gb|EEW92061.1| uroporphyrinogen decarboxylase [Brucella suis bv. 4 str. 40]
gi|260669281|gb|EEX56221.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|260671119|gb|EEX57940.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675847|gb|EEX62668.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|260874293|gb|EEX81362.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|261295765|gb|EEX99261.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|261303925|gb|EEY07422.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|261745524|gb|EEY33450.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|264659813|gb|EEZ30074.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|297174463|gb|EFH33810.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 5 str. B3196]
Length = 341
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 242/340 (71%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|306842818|ref|ZP_07475458.1| uroporphyrinogen decarboxylase [Brucella sp. BO2]
gi|306287012|gb|EFM58523.1| uroporphyrinogen decarboxylase [Brucella sp. BO2]
Length = 341
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPI R
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIHR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLEAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL +G GP +FNLGHGITPQ +NV ++ VR EK
Sbjct: 301 DAILARMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGEK 340
>gi|17986285|ref|NP_538919.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|225853496|ref|YP_002733729.1| uroporphyrinogen decarboxylase [Brucella melitensis ATCC 23457]
gi|256045670|ref|ZP_05448548.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263021|ref|ZP_05465553.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 2 str.
63/9]
gi|260562971|ref|ZP_05833457.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|265992091|ref|ZP_06104648.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|23813997|sp|Q8YJT1|DCUP_BRUME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767688|sp|C0RFV3|DCUP_BRUMB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17981867|gb|AAL51183.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|225641861|gb|ACO01775.1| uroporphyrinogen decarboxylase [Brucella melitensis ATCC 23457]
gi|260152987|gb|EEW88079.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|263003157|gb|EEZ15450.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092894|gb|EEZ17069.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 2 str.
63/9]
gi|326410062|gb|ADZ67127.1| uroporphyrinogen decarboxylase [Brucella melitensis M28]
gi|326539779|gb|ADZ87994.1| uroporphyrinogen decarboxylase [Brucella melitensis M5-90]
Length = 341
Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/339 (54%), Positives = 241/339 (71%), Gaps = 2/339 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR+
Sbjct: 4 KVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++++
Sbjct: 64 GFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYET 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+D
Sbjct: 122 VRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLAD 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
VSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 182 VSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV+
Sbjct: 242 KGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGVD 301
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 302 AILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|148559474|ref|YP_001259871.1| uroporphyrinogen decarboxylase [Brucella ovis ATCC 25840]
gi|166234232|sp|A5VT24|DCUP_BRUO2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148370731|gb|ABQ60710.1| uroporphyrinogen decarboxylase [Brucella ovis ATCC 25840]
Length = 341
Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 242/340 (71%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRLVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|110635804|ref|YP_676012.1| uroporphyrinogen decarboxylase [Mesorhizobium sp. BNC1]
gi|123161643|sp|Q11CM8|DCUP_MESSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110286788|gb|ABG64847.1| uroporphyrinogen decarboxylase [Chelativorans sp. BNC1]
Length = 342
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 235/346 (67%), Gaps = 4/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ERK +LE L G + PPPIWLMRQAGRYLPEYR+ RKK +FLD+CY PE VE+TL
Sbjct: 1 MAERK--LLEALNGRTVFPPPIWLMRQAGRYLPEYRETRKKAGSFLDLCYNPELAVEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILVI ALGR++RF E GP M PI EI L+PN L N L
Sbjct: 59 QPIRRFGFDAAILFSDILVIPHALGRDLRFEEGAGPLMSPIQANEIPGLDPN--LIHNRL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ LR +L LIGFCGAPWTVA+YMI+G D R+F Y++ + F+ L
Sbjct: 117 QPVYETVRRLRSELSEETALIGFCGAPWTVATYMIAGRGTPDQAPARLFGYRHPKEFSEL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD +S SA+YLI QI G D +QIFD+ AG L E F+ + R V I+ VR ++PN
Sbjct: 177 LDTISAASADYLIRQIDEGADAVQIFDSWAGILDETSFDQWCLRPVAEIVRRVRERHPNV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F KGAG++ YR+ T A+GLDW+VPLS A LQ EGPVQGNLDPMRLV G Q
Sbjct: 237 PIIGFPKGAGWLYSRYRQQTGVTALGLDWTVPLSEASRLQAEGPVQGNLDPMRLVAGGQA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ GV IL LG PFIFNLGHGITP+ +V +++ VR ++
Sbjct: 297 LSKGVEDILSALGGAPFIFNLGHGITPETPIGHVEAMIQQVREGRL 342
>gi|254694689|ref|ZP_05156517.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|254700698|ref|ZP_05162526.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
gi|261215016|ref|ZP_05929297.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|261751207|ref|ZP_05994916.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
gi|260916623|gb|EEX83484.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|261740960|gb|EEY28886.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
Length = 341
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ LGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHTLGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|254713530|ref|ZP_05175341.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
gi|254716115|ref|ZP_05177926.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261217885|ref|ZP_05932166.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261321265|ref|ZP_05960462.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
gi|260922974|gb|EEX89542.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261293955|gb|EEX97451.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
Length = 341
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGI PQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGIIPQAPIENVQRMIDRVRGGK 340
>gi|254718109|ref|ZP_05179920.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|265983061|ref|ZP_06095796.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|306839734|ref|ZP_07472536.1| uroporphyrinogen decarboxylase [Brucella sp. NF 2653]
gi|264661653|gb|EEZ31914.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|306405194|gb|EFM61471.1| uroporphyrinogen decarboxylase [Brucella sp. NF 2653]
Length = 341
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVQLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ + L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSVVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|294851295|ref|ZP_06791968.1| uroporphyrinogen decarboxylase [Brucella sp. NVSL 07-0026]
gi|294819884|gb|EFG36883.1| uroporphyrinogen decarboxylase [Brucella sp. NVSL 07-0026]
Length = 341
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G G +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGALVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|256060031|ref|ZP_05450213.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
gi|261324007|ref|ZP_05963204.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
gi|261299987|gb|EEY03484.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
Length = 341
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGA WTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAAWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|306843483|ref|ZP_07476084.1| uroporphyrinogen decarboxylase [Brucella sp. BO1]
gi|306276174|gb|EFM57874.1| uroporphyrinogen decarboxylase [Brucella sp. BO1]
Length = 341
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 240/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPI R
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIHR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILARMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|256158565|ref|ZP_05456455.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
gi|265997076|ref|ZP_06109633.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
gi|262551544|gb|EEZ07534.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
Length = 341
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/340 (53%), Positives = 241/340 (70%), Gaps = 2/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLD +R+V G + +GV
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDLLRVVAGGNALDEGV 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 301 DAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|90420996|ref|ZP_01228900.1| uroporphyrinogen decarboxylase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334774|gb|EAS48550.1| uroporphyrinogen decarboxylase [Aurantimonas manganoxydans
SI85-9A1]
Length = 339
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 234/340 (68%), Gaps = 2/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +K++ VL+G I PPP+WLMRQAGRYLPEYR R+ FL++CY P++ E+TLQPI
Sbjct: 2 KTRKLVRVLEGERIFPPPVWLMRQAGRYLPEYRATRQTAGGFLELCYNPDFATEVTLQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ FDAAILFSDILVI DAL R + FV+ EGP++ PI EI L+P+ +L P+
Sbjct: 62 RRFGFDAAILFSDILVIPDALDRGLHFVQGEGPKLTPIRPDEIARLDPS--RADTHLAPV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ LRK+LP +LIGFCGAPWTVA+YMI+G D R+F Y++ LL
Sbjct: 120 IATVARLRKELPEETSLIGFCGAPWTVATYMIAGHGTPDQAPARLFGYRHPDEMEQLLYL 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++ A+YLI Q+ AG D +QIFD+ AG L E FE YA + V R++ VR P+AK I
Sbjct: 180 LAEMGADYLIRQLQAGADCVQIFDSWAGVLDEATFEAYAVKPVARMVEKVRAAVPDAKII 239
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
FAKGAG +L YR+ T NA+GLDW+VP+ A LQ EG +QGNLDP+RL+ G + + +
Sbjct: 240 GFAKGAGSLLNGYRQKTGVNAVGLDWTVPMDQARALQTEGAIQGNLDPLRLIAGGKALDE 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV+ IL+ LG GP IFNLGHGITP +V L+K +R
Sbjct: 300 GVDRILEGLGDGPLIFNLGHGITPDAPIAHVEALLKRIRG 339
>gi|260467194|ref|ZP_05813371.1| uroporphyrinogen decarboxylase [Mesorhizobium opportunistum
WSM2075]
gi|259029047|gb|EEW30346.1| uroporphyrinogen decarboxylase [Mesorhizobium opportunistum
WSM2075]
Length = 343
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 232/336 (69%), Gaps = 2/336 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+VL+G I PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI R+
Sbjct: 7 MLDVLKGKAIFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPIERFG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FDA+ILFSDILV+ ALGR+VRF E GP + PI+ EI L D+F L P+++++
Sbjct: 67 FDASILFSDILVVPHALGRDVRFEEGRGPLLTPISAAEILALES--DVFHVNLEPVYETV 124
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR +LP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL L+D
Sbjct: 125 RRLRARLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPAAFKQLLKVLADH 184
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
SA YLI QI AG DV+QIFD+ +G L + FE + V I+ VR +P+ I F K
Sbjct: 185 SAAYLIRQIEAGADVVQIFDSWSGVLDDASFEQFCVEPVAEIVRQVRAVHPDVPVIGFPK 244
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
GAG ++YR T +G+DW+VPL+ A +LQ+ G VQGNLDP+RLV G + + DGV+A
Sbjct: 245 GAGARYQSYREKTGVAGLGIDWTVPLAAAKDLQRSGAVQGNLDPLRLVAGGKALSDGVDA 304
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 305 ILGALGDGPLIFNLGHGITPETPVAHVEAMVKLVRS 340
>gi|13473780|ref|NP_105348.1| uroporphyrinogen decarboxylase [Mesorhizobium loti MAFF303099]
gi|23814012|sp|Q98DY6|DCUP_RHILO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|14024531|dbj|BAB51134.1| uroporphyrinogen decarboxylase [Mesorhizobium loti MAFF303099]
Length = 343
Score = 367 bits (943), Expect = e-99, Method: Compositional matrix adjust.
Identities = 176/340 (51%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + +L+VL+G PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI
Sbjct: 3 KSRIMLDVLKGEAHFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ FDA+ILFSDILV+ ALGR+VRF E GP + PI+ EI L D+F L P+
Sbjct: 63 ERFGFDASILFSDILVVPHALGRDVRFEEGRGPLLTPISVAEIMALES--DVFHVNLEPV 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ LR KLP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL
Sbjct: 121 YETVRRLRAKLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPAAFQHLLKV 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D SA YLI QI AG DV+QIFD+ +G L + F+ + V I+ V+ +P+ I
Sbjct: 181 LADHSAAYLIRQIEAGADVVQIFDSWSGVLDDASFDQFCVWPVAEIVRQVQAVHPDVPII 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG + YR+ T +G+DW+VPL+ A +LQ+ G VQGNLDP+RLV G + + D
Sbjct: 241 GFPKGAGARYRTYRQKTGVTGLGIDWTVPLAAAKDLQRSGAVQGNLDPLRLVAGGKALSD 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV AIL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 301 GVEAILKALGDGPLIFNLGHGITPETPIAHVEAMVKQVRS 340
>gi|319780609|ref|YP_004140085.1| uroporphyrinogen decarboxylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166497|gb|ADV10035.1| uroporphyrinogen decarboxylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 343
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 178/336 (52%), Positives = 230/336 (68%), Gaps = 2/336 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+VL+G PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI R+
Sbjct: 7 MLDVLKGKAHFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPIERFG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FDA+ILFSDILV+ ALGR+VRF E GP + PIT EI L + F L P+++++
Sbjct: 67 FDASILFSDILVVPHALGRDVRFEEGRGPLLTPITAPEILALEGKV--FHVNLEPVYETV 124
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR KLP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL L++
Sbjct: 125 RRLRAKLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPVAFQRLLKVLAEH 184
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
SA YLI QI AG DV+QIFD+ +G L + F+ + + + I+ VR YP+ I F K
Sbjct: 185 SAAYLIRQIEAGADVVQIFDSWSGVLDDETFDLFCVQPMAEIVGRVRAVYPDVPIIGFPK 244
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
GAG + YR+ T A+G+DW+VPL A ELQ+ G VQGNLDP+RLV G + + DGV A
Sbjct: 245 GAGSRYRTYRQKTGVTALGIDWTVPLIAAKELQRSGAVQGNLDPLRLVAGGKALSDGVEA 304
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 305 ILRALGDGPLIFNLGHGITPETPIAHVEAMVKQVRS 340
>gi|304392712|ref|ZP_07374652.1| uroporphyrinogen decarboxylase [Ahrensia sp. R2A130]
gi|303295342|gb|EFL89702.1| uroporphyrinogen decarboxylase [Ahrensia sp. R2A130]
Length = 342
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + ++ ++ V+ G + PPIW+MRQAGRYLPEY+ RK+ FLD+CY PE +E+TL
Sbjct: 2 VEKHERAVMRVMAGETLERPPIWMMRQAGRYLPEYKATRKQAGGFLDLCYNPELAIEVTL 61
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILVI DALG +VRF E GP + P+ I L P + L +L
Sbjct: 62 QPIRRFGFDAAILFSDILVIPDALGMDVRFEEGRGPILKPVDLAHIDRLTP--EGTLEHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR +LP+ TL+GFCGAPWTVA+YMI+G D G R F+ + AF +
Sbjct: 120 APVLETVKGLRSQLPSETTLLGFCGAPWTVATYMIAGHGTPDQGPARQFSLNHPEAFAKM 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + SA YL+AQ+ AG D +QIFD+ A L E +F+ + V +I+ VR + P+A
Sbjct: 180 MDVLVEASAAYLVAQLKAGADAVQIFDSWASVLDEAQFQLWCVEPVKAVIAKVRAEVPDA 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I F KG G +Y T + +GLDW++P SFA ELQK+ PVQGNLDP RL+ G
Sbjct: 240 KIIGFPKGVGAFYADYAAQTGIDMLGLDWTIPFSFAKELQKKTPVQGNLDPNRLIAGGSA 299
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+AIL+ L GP +FNLGHGITP + +V ++ VR
Sbjct: 300 LDEGVDAILENLSDGPLVFNLGHGITPLTEIAHVEQMIARVRG 342
>gi|307943438|ref|ZP_07658782.1| uroporphyrinogen decarboxylase [Roseibium sp. TrichSKD4]
gi|307773068|gb|EFO32285.1| uroporphyrinogen decarboxylase [Roseibium sp. TrichSKD4]
Length = 334
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 219/334 (65%), Gaps = 2/334 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL G + PPPIW+MRQAGRYLPEYR++RKK NFL+ CY+P+ E+TLQPIRRY F
Sbjct: 1 MRVLAGEKLWPPPIWMMRQAGRYLPEYREVRKKAANFLEFCYSPDLATEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DA+ILFSDI V+ DA+G VRF E GP ++P+ T+ + L+ + +L P+ +++S
Sbjct: 61 DASILFSDIFVVPDAIGYPVRFEERRGPVLEPLCTELVDRLDQ--ERAEKHLEPVIETVS 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR +LP TL+GFCGAPWTVA Y ++G +D RV AY++ +D L S
Sbjct: 119 RLRAELPPETTLLGFCGAPWTVACYSVAGHTTQDQVAARVGAYRDPELMARFIDQLVTAS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL+ Q+ AG D +QIFDT AG L + FE ++ + I+ V+ + PNAK I F K
Sbjct: 179 IRYLVRQLDAGADAVQIFDTWAGVLDDAGFERWSIQPTRAIVDGVKAQRPNAKIIGFPKA 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+ + Y T +A+G DW+ P ALE+QK+ P+QGNLDPMRLV G + + +G++ I
Sbjct: 239 SSARMATYIARTGVDAVGFDWTAPDHLALEIQKKVPIQGNLDPMRLVAGGKALDEGIDHI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L GPFIFNLGHG+TP DP+NV +V+ V+
Sbjct: 299 LQTFNEGPFIFNLGHGVTPDADPENVARMVERVK 332
>gi|307211525|gb|EFN87613.1| Transcription termination factor rho [Harpegnathos saltator]
Length = 743
Score = 335 bits (860), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 223/320 (69%), Gaps = 2/320 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+IR+ +FLD+CYTP E+TLQPIRR+ FDAAILFSDILVI AL
Sbjct: 1 MRQAGRYLPEYRKIRQIAGSFLDLCYTPALAAEVTLQPIRRFGFDAAILFSDILVIPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
GR++ F E GP++ P+T +I L N + L P++++IS++++ + LIGFC
Sbjct: 61 GRDLHFEEGRGPQLTPVTVHDISKLTDN--GAVERLAPVYETISLVKQDIDEKTALIGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+F Y+N +A LL+ L+DVSA++LIAQI AG + +Q
Sbjct: 119 GAPWTVATYMIAGHGTSDQAPARLFGYENPQAMQDLLNCLADVSADHLIAQIEAGAEAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG L E FE + V R++ VRR++ + I F +GAG + +Y + T A
Sbjct: 179 IFDSWAGVLDETSFEAFCVAPVRRMVERVRRRHADTPIIGFPRGAGVLYTDYAQKTGVTA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
+GLDWSVPLSFA +LQ+ PVQGNLDP+RLV G + + +GV+ IL LGS PFIFNLGHG
Sbjct: 239 LGLDWSVPLSFAQKLQETVPVQGNLDPVRLVAGGKALDEGVDMILQALGSKPFIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSE 344
ITPQ +V +VK VR +
Sbjct: 299 ITPQTPIAHVEQMVKRVRGQ 318
>gi|118591445|ref|ZP_01548843.1| uroporphyrinogen decarboxylase [Stappia aggregata IAM 12614]
gi|118436117|gb|EAV42760.1| uroporphyrinogen decarboxylase [Stappia aggregata IAM 12614]
Length = 342
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 2/342 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + ++ VL G + PPP+W+MRQAGRYLPEYR++R K NFL+ CY+P+ E+TL
Sbjct: 1 MKSQDRSVMRVLSGEKLWPPPVWMMRQAGRYLPEYREVRSKAANFLEFCYSPDLATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+ILFSDI V+ DA+G VRF E GP ++P+++ + L + ++L
Sbjct: 61 QPIRRYGFDASILFSDIFVVPDAIGYPVRFEEGRGPVLEPLSSDLLDRLEQ--ERAEDHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++S LR +LP TL+GFCGAPWTVA Y ++G +D RV AY++
Sbjct: 119 KPVIETVSRLRAELPQATTLLGFCGAPWTVACYSVAGHTTQDQVAARVGAYRDPDLMQRF 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L S YLI Q+ AG D +QIFDT AG L E F+ ++ RI+ VR P+A
Sbjct: 179 IDQLVTASIRYLIRQLEAGADAVQIFDTWAGVLDEAGFKRWSIEPTRRIVDGVRAVRPDA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I F K + + + T +A+G DW+ P AL++QK+ P+QGNLDPMRLV G +
Sbjct: 239 KIIGFPKASSARMMAFVEGTGVDAVGFDWTAPDQVALDIQKKVPIQGNLDPMRLVAGGKA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +GV IL+ GP +FNLGHG+TP DP NV +V+ VR
Sbjct: 299 LEEGVAHILNTFDKGPLVFNLGHGVTPDADPDNVARMVELVR 340
>gi|83594945|ref|YP_428697.1| uroporphyrinogen decarboxylase [Rhodospirillum rubrum ATCC 11170]
gi|123739389|sp|Q2RN85|DCUP_RHORT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83577859|gb|ABC24410.1| uroporphyrinogen decarboxylase [Rhodospirillum rubrum ATCC 11170]
Length = 348
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 224/346 (64%), Gaps = 4/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++ ++ L+ L G ++PPP+WLMRQAGRYLPEYR R++ FLD+CYTP+ VE+TLQ
Sbjct: 5 SKTQKPFLQALAGETLSPPPVWLMRQAGRYLPEYRATREEAGGFLDLCYTPKLAVEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYL 120
P+RRY FDAAILFSDILV+ +A+GR V F + EGP +DP+T++ ++ L P L
Sbjct: 65 PLRRYAFDAAILFSDILVVPNAIGRQVAFKQGEGPVLDPLTSRADVEALEPG--KLRERL 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++ L +P+ LIGF GAPWTVA+YM+ GG KD + + Y F L
Sbjct: 123 GPVFETVRGLASAIPSTTALIGFAGAPWTVATYMLEGGSSKDFSVAKSWIYSRPDDFAAL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L + +YLIAQI AG + IQIFDT AG L E EF + +GRI A+ + P
Sbjct: 183 MEVLISATTDYLIAQIDAGAEAIQIFDTWAGVLPETEFHRWVIEPIGRITRALHEQRPGV 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F KGAG + + + R T + +GLD SVPL++A + LQ VQGN+DP+ LV G
Sbjct: 243 PVIGFPKGAGVLYETFIRETGVDGVGLDASVPLAWAAKTLQPLCTVQGNMDPLLLVEGGP 302
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+M V +LD LG GPFIFNLGHGI PQ P+NV L+ VR+ +
Sbjct: 303 LMEQAVKRLLDTLGHGPFIFNLGHGIVPQTPPENVARLIDLVRAPR 348
>gi|254472244|ref|ZP_05085644.1| uroporphyrinogen decarboxylase [Pseudovibrio sp. JE062]
gi|211958527|gb|EEA93727.1| uroporphyrinogen decarboxylase [Pseudovibrio sp. JE062]
Length = 342
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 218/343 (63%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ ++ VL G + PPIW+MRQAGRYLPEYR R K NFLD CY + E+TL
Sbjct: 1 MESHERAVMRVLAGEKLERPPIWMMRQAGRYLPEYRAERAKAPNFLDFCYNTDLATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDI V+ DALG V F E GP ++P++ ++ L+ + +L
Sbjct: 61 QPIRRYGFDAAILFSDIFVVPDALGYPVNFEEGRGPVLEPLSIGQVEKLDQA--RTMEHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ ++ LR +LP TL+GFCGAPWTVA Y ++G +D R+ +Y++
Sbjct: 119 APVIATVERLRAELPTETTLLGFCGAPWTVACYSVAGHTTQDQVAARIGSYKDPALLTAF 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + S YL+AQ+ G D +QIFDT AG L + FE ++ +I+ V+ + PNA
Sbjct: 179 IDQLVEASITYLVAQLDGGADALQIFDTWAGVLDDIGFEQWSVGPTRKIVDGVKAQRPNA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I F K + LK Y T +A+GLDW+VP A E+QK PVQGN+DPMRLV G +
Sbjct: 239 KIIGFPKASAARLKRYVEGTGVDAVGLDWTVPAEVAQEIQKIVPVQGNMDPMRLVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G++ L+VLG+GP IFNLGHG+ PQ P++V ++VK V+
Sbjct: 299 LETGIDHALEVLGNGPHIFNLGHGVVPQTPPEHVAEMVKRVKG 341
>gi|217978673|ref|YP_002362820.1| uroporphyrinogen decarboxylase [Methylocella silvestris BL2]
gi|217504049|gb|ACK51458.1| uroporphyrinogen decarboxylase [Methylocella silvestris BL2]
Length = 349
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/339 (49%), Positives = 214/339 (63%), Gaps = 4/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K L VL G + PPPIWLMRQAGRYLPEYR++R K +FLD CY+P+ E TLQPIRR
Sbjct: 8 KKFLRVLDGEALFPPPIWLMRQAGRYLPEYRELRAKTPSFLDFCYSPKIAAEATLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
+ FDAAILFSDILV+ DALG+ V F NEGPR++PI ++E + LN ID L L P+F
Sbjct: 68 FGFDAAILFSDILVVPDALGQKVSFETNEGPRLEPIQSEEAFEKLNSEID--LGRLEPVF 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I +R+ LP LIGFCGAPWTVASYM++G D G R+ AY+ F L D L
Sbjct: 126 ETIIRIREALPPETALIGFCGAPWTVASYMVAGRGTPDQGPARLLAYRQPELFQQLTDRL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S YL QI AGV+ +QIFDT AG L EFE + I++ V+ ++P+ K I
Sbjct: 186 VEASIRYLCRQIDAGVEAVQIFDTWAGVLPAGEFECWCLAPTKAIVAGVKSRHPDVKIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KG G L N+ LT +A+GLD +V ++A G QGNLDP+ L+ G +
Sbjct: 246 FPKGVGSRLVNFADLTGVDAVGLDSAVDPAWAASALSPGRAAQGNLDPLALIAGGAALQT 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL+ P +FNLGHG+TPQ +NV LV VR
Sbjct: 306 ATRRILEAFRGRPHVFNLGHGVTPQTPVENVAALVDLVR 344
>gi|182680469|ref|YP_001834615.1| uroporphyrinogen decarboxylase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636352|gb|ACB97126.1| uroporphyrinogen decarboxylase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 350
Score = 328 bits (841), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/339 (48%), Positives = 219/339 (64%), Gaps = 3/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L+V QG + + PP+WLMRQAGRYLPEY+ IR + +FLD CY P E TLQPIRR
Sbjct: 14 KPLLDVCQGKIFSKPPVWLMRQAGRYLPEYQAIRAQSASFLDFCYNPLAASEATLQPIRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNYLLPIF 124
+ FDAAILFSDILVI DALG+ VRF + EGPR++PI T + +L L IDL N L P+F
Sbjct: 74 FGFDAAILFSDILVIPDALGQKVRFEQGEGPRLEPIATLDDFLRLRETIDL--NLLAPVF 131
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + K LP LIGFCGAPWTVASYMI+G D R+FAY + F L+D L
Sbjct: 132 ETVDRVAKALPPATALIGFCGAPWTVASYMIAGRGTPDQAPARLFAYHHRDLFQRLIDRL 191
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
S +YL Q AGV+++QIFD+ AG L + E+E + + I+ VR++YP AK I
Sbjct: 192 VAASVDYLSRQFEAGVEIVQIFDSWAGVLPQSEYEAWCLEPIRAIVEGVRQRYPGAKIIG 251
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F +G G L+++ ++T + +GLD S L+FA L QGNLDP+ L+ G + + G
Sbjct: 252 FPRGIGSRLESFAKITGVDVLGLDTSAELTFAAGLDPRLVFQGNLDPLALLAGGEALERG 311
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V AIL L PFIFNLGHGI P +V LV +R+
Sbjct: 312 VAAILSDLQGRPFIFNLGHGILPTTPIAHVERLVALLRA 350
>gi|218663122|ref|ZP_03519052.1| uroporphyrinogen decarboxylase [Rhizobium etli IE4771]
Length = 431
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/266 (57%), Positives = 199/266 (74%), Gaps = 2/266 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ ++KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TL
Sbjct: 1 MSDTRRKIMRVLDGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + + YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLNG--EEVVAYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY RAF L
Sbjct: 119 RPVLETVRRLREELPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYNYPRAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVS++YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++++ + P+A
Sbjct: 179 LMLLADVSSDYLVAQIDAGADAVQIFDSWAGVLGEREFETFAIRPVARMIASIKSRRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIG 266
+ I+FAKGAGY LK YR+ T ++AIG
Sbjct: 239 RIIAFAKGAGYQLKTYRQKTGADAIG 264
>gi|154251710|ref|YP_001412534.1| uroporphyrinogen decarboxylase [Parvibaculum lavamentivorans DS-1]
gi|154155660|gb|ABS62877.1| uroporphyrinogen decarboxylase [Parvibaculum lavamentivorans DS-1]
Length = 355
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 220/340 (64%), Gaps = 3/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L L+G PIWLMRQAGRYLPEYR++R + +FLD+CYTP++ E+TLQPIRR
Sbjct: 14 KKLLRALKGEATEGVPIWLMRQAGRYLPEYRKVRAEAGSFLDLCYTPDFAEEVTLQPIRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-TQEIYLLNPNIDLFLNYLLPIF 124
Y FDA+ILFSDILV+ DALG+ V F E EGP ++ IT + L P ++ +L P++
Sbjct: 74 YGFDASILFSDILVVPDALGQKVAFKEGEGPVLEAITNVAGLAALKP-VEAVREHLQPVY 132
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ + LR+ LP TLIGF GAPWTVA+Y++ G D G + +AY+ F L+D L
Sbjct: 133 EVVKRLRRSLPPETTLIGFAGAPWTVATYVVGGRGSPDQGAAKAWAYRAPDEFQKLIDLL 192
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + E+L AQ+ AG +V+Q+FDT AG L E FE +A + + RI ++ ++P+ I+
Sbjct: 193 TDATVEHLSAQVEAGAEVLQVFDTWAGSLPELSFERFALQPMKRIRETLKERFPDIPVIA 252
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG M Y R T N + LD V +A E LQ G VQGNLDP+ LV G M
Sbjct: 253 FPRGAGGMAARYFRETGVNGLSLDTGVSALWAREHLQPLGCVQGNLDPLLLVAGGAEMRR 312
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL+ LG GPFIFNLGHGI PQ P++V +LV V+
Sbjct: 313 QALHILETLGQGPFIFNLGHGIVPQTPPEHVAELVTLVKE 352
>gi|254503714|ref|ZP_05115865.1| uroporphyrinogen decarboxylase [Labrenzia alexandrii DFL-11]
gi|222439785|gb|EEE46464.1| uroporphyrinogen decarboxylase [Labrenzia alexandrii DFL-11]
Length = 318
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/318 (48%), Positives = 204/318 (64%), Gaps = 2/318 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R K KNFLD CYTP+ E+TLQPIRRY FDA+ILFSDI V+ DA+
Sbjct: 1 MRQAGRYLPEYREVRAKAKNFLDFCYTPDLATEVTLQPIRRYGFDASILFSDIFVVPDAI 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G VRF E GP ++P++ I L D ++L P+ +++S LR +LP TL+GFC
Sbjct: 61 GYPVRFEEGRGPVLEPLSADLIDRLEQ--DRAEDHLKPVIETVSRLRAELPEETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GA WTVA Y ++G +D RV AY++ +D L S YLI Q+ AG D +Q
Sbjct: 119 GACWTVACYSVAGHTTQDQVAARVGAYKDPDLMQRFIDELVTASISYLIRQLDAGADALQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFDT AG L + F+ + +I+ V+ P+AK I F K + ++ Y + T +A
Sbjct: 179 IFDTWAGVLDDTGFQRWCIEPTRKIVDGVKAARPDAKIIGFPKASSARMQAYIKGTGVDA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
+G DW+ P ALE+QK+ P+QGNLDPMRLV G + + DGV IL GPFIFNLGHG
Sbjct: 239 VGFDWTAPDHLALEIQKQVPIQGNLDPMRLVAGGKALEDGVQHILKTFDKGPFIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVR 342
+TP DP NV +V+ V+
Sbjct: 299 VTPDADPDNVARMVEMVK 316
>gi|85716071|ref|ZP_01047047.1| uroporphyrinogen decarboxylase [Nitrobacter sp. Nb-311A]
gi|85697070|gb|EAQ34952.1| uroporphyrinogen decarboxylase [Nitrobacter sp. Nb-311A]
Length = 372
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 219/339 (64%), Gaps = 4/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LEVL G PPIW+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQP+RR
Sbjct: 30 KPFLEVLSGRRQAVPPIWMMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPVRR 89
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR VRF EGPR+DP+ T +I L+ D+ L P+F
Sbjct: 90 FAFDAAIIFSDILVIPYALGRTVRFEAGEGPRLDPLDTPDKIAALSSEADM--TKLEPVF 147
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++++L + LIGFCGAPWTVA+YMI+G D R+ AY++ AF ++D +
Sbjct: 148 EALRRVKRELDSKTALIGFCGAPWTVATYMIAGQGTPDQAPARMMAYRHPDAFAKVIDAI 207
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D S YL+ Q+ AG D +QIFDT AG L EFE ++ RI++ VRR+ P+AK I
Sbjct: 208 VDNSIRYLLGQLQAGADALQIFDTWAGVLPPREFEQWSIEPTKRIVAGVRRQVPDAKIIG 267
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L +Y T +A+ +DW+ S + +Q VQGNLDP+ L+ G +
Sbjct: 268 FPRGAGALLPSYIEATGVDAVSIDWAAEPSLIRDKVQNRVAVQGNLDPLALIAGGAALDR 327
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ +L +G IFNLGHGI P+ +V +++ VR
Sbjct: 328 AVDDVLTNFAAGRLIFNLGHGIQPETPIPHVEQMIRRVR 366
>gi|300024778|ref|YP_003757389.1| uroporphyrinogen decarboxylase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526599|gb|ADJ25068.1| uroporphyrinogen decarboxylase [Hyphomicrobium denitrificans ATCC
51888]
Length = 356
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 212/346 (61%), Gaps = 10/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++ L+ G ++PPP+WLMRQAGRYLPEYRQ+R + +FL +CYTP E+TLQPIR
Sbjct: 16 ERRFLKPFSGKAVSPPPVWLMRQAGRYLPEYRQVRAEAGSFLKLCYTPRLAAEVTLQPIR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT----QEIYLLNPNIDLFLNYL 120
R+ FDAAILFSDILV+ DALG+ VRF E EGPR+DPI T + L N L
Sbjct: 76 RFGFDAAILFSDILVVPDALGQTVRFEEGEGPRLDPIQTLADLDRLALSNTETKFSL--- 132
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ LR++LP LIGFCGAPWTVA+Y+ G D R +AY++ F L
Sbjct: 133 --VCETVERLRRELPRETALIGFCGAPWTVATYVAEGRGSSDQSAARQWAYRDPDGFQRL 190
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+D S EYL Q+ AG D +QIFD+ AG L E +F+ + +I+ VR ++P+
Sbjct: 191 IALLTDASIEYLSGQVRAGADALQIFDSWAGSLAEDQFQRWVIAPTAKIVREVRARHPDV 250
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGNQ 299
I F +G+ +L +Y T + + D S PL E ++G VQGNLDP+ L G +
Sbjct: 251 PIIGFPRGSAALLDSYLEGTGVDGVSCDTSCPLGLMQETARKGRVVQGNLDPLLLAAGGE 310
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ I D + PF+FNLGHGI P P+NV LV+ +R +
Sbjct: 311 ALDKRVDDIRDAMTGLPFVFNLGHGIVPHTPPENVARLVERLRRSR 356
>gi|92118433|ref|YP_578162.1| uroporphyrinogen decarboxylase [Nitrobacter hamburgensis X14]
gi|122417215|sp|Q1QJ95|DCUP_NITHX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91801327|gb|ABE63702.1| uroporphyrinogen decarboxylase [Nitrobacter hamburgensis X14]
Length = 350
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 218/343 (63%), Gaps = 4/343 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LEVL G PPIW+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQPIRR
Sbjct: 8 KPFLEVLSGRRQAVPPIWMMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T ++ L+ D+ L P+F
Sbjct: 68 FAFDAAIIFSDILVIPYALGRSVRFEVGEGPRLDPLDTPDMAATLSREADM--TKLEPVF 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R++L + LIGFCGAPWTVA+YM++G D R+ AY++ AF ++D L
Sbjct: 126 EALRRVRRELDSKTALIGFCGAPWTVATYMVAGRGTPDQAPARMMAYRHPEAFAKIIDVL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S YL+ Q+ AG DV+QIFDT AG L EF ++ RI+ VR+ P+AK I
Sbjct: 186 VENSVRYLLGQLKAGADVLQIFDTWAGVLPPREFARWSIEPTRRIVEGVRKIVPDAKIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L +Y T +A+ +DW+ S E +Q VQGNLDP+ L+ G +
Sbjct: 246 FPRGAGALLPSYIEATGVDAVSIDWAAEPSLVREKVQSRVAVQGNLDPLALIAGGAALDR 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +L G IFNLGHGI P+ +V +++ VR +
Sbjct: 306 AVDDVLANFAGGRLIFNLGHGIQPETPIPHVEQMIRRVRGSGL 348
>gi|148253695|ref|YP_001238280.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. BTAi1]
gi|172047309|sp|A5EDY0|DCUP_BRASB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146405868|gb|ABQ34374.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. BTAi1]
Length = 343
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 214/342 (62%), Gaps = 4/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++VL G + PP+W+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIRR
Sbjct: 3 KPFIDVLAGQRQSAPPVWMMRQAGRYLPEYREVRAKAGGFLDLCFNPEMAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T E I L + D L L +F
Sbjct: 63 FGFDAAIIFSDILVIPHALGRSVRFEVGEGPRLDPLDTPEKIATLAGHAD--LTKLDAVF 120
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R +LP LIGFCGAPWTVA+YM++G D R+ AY AF+ ++D L
Sbjct: 121 EALRRVRAELPKSTALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYAQPEAFSRIIDAL 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S YL+ Q+ AG D +QIFDT AG L EF ++A RI+ VR P+AK I
Sbjct: 181 VESSIAYLLKQLEAGADALQIFDTWAGVLSPREFARWSAAPTRRIVEGVRNARPDAKIIG 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L Y T +A+ +DW+ S E +Q + VQGNLDP+ L+ G +
Sbjct: 241 FPRGAGALLPGYVAETAVDAVSIDWTAEPSLVRERVQSKVAVQGNLDPLALMTGGAALDQ 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI P+ +V ++K VR+ K
Sbjct: 301 AVDDVLASYAGGRHIFNLGHGILPETPIAHVEQMLKRVRAYK 342
>gi|144899671|emb|CAM76535.1| Uroporphyrinogen decarboxylase (URO-D) [Magnetospirillum
gryphiswaldense MSR-1]
Length = 345
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/341 (46%), Positives = 208/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L L G I PPP WLMRQAGRYLPEYR R + +FLD+CY PE VE+TLQP+RR
Sbjct: 5 KPFLRALAGETITPPPFWLMRQAGRYLPEYRATRTQAGSFLDLCYNPELAVEVTLQPLRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILFSDILV+ D LG+ V F E EGP + PI + L +I + + P++
Sbjct: 65 YGFDAAILFSDILVVPDGLGQGVAFKEGEGPVLTPIRSAR-DLDGLDISGLHDRMAPVYA 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ L K +P LIGF GAPWTVA+YMI GG KD Q + + F L++ L
Sbjct: 124 TVAGLSKAIPATTALIGFSGAPWTVATYMIEGGGSKDFSQAKKLMWAEPETFARLMELLI 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YLI QI AG + IQIFDT AG L E EF + R++ + + P I F
Sbjct: 184 EATGQYLIRQIDAGAEAIQIFDTWAGALPETEFRRWVIEPARRLVERIHSERPGVPVIGF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG + + Y T + + LD SVPL +A LQ + VQGNLDP+ LV G + G
Sbjct: 244 PRGAGILYEAYVTETKVDGVSLDSSVPLDWAARVLQPKCTVQGNLDPILLVAGGDALDAG 303
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ +L+ LG GPFIFNLGHGI P P+NV L + V++ K
Sbjct: 304 IDRVLNTLGKGPFIFNLGHGIIPPTPPENVARLAQRVKAFK 344
>gi|146338935|ref|YP_001203983.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. ORS278]
gi|172046979|sp|A4YPC0|DCUP_BRASO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146191741|emb|CAL75746.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. ORS278]
Length = 343
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 214/342 (62%), Gaps = 4/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++VL G + PPIW+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIRR
Sbjct: 3 KPFIDVLAGQRQSVPPIWMMRQAGRYLPEYREVRAKAGGFLDLCFNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T E I L+ D L+ L +F
Sbjct: 63 FGFDAAIIFSDILVIPHALGRSVRFEVGEGPRLDPLDTPEKISTLSGEAD--LSKLEAVF 120
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R +LP LIGFCGAPWTVA+YM++G D R+ AY+ AF ++D L
Sbjct: 121 EALRRVRSELPQSTALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYRAPEAFQRIIDAL 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D S YL+ Q+ AG D +QIFDT AG L EF ++ RI+ VR+ P+AK I
Sbjct: 181 VDSSIAYLLKQLDAGADALQIFDTWAGVLSPREFARWSVAPTRRIVEGVRKIRPDAKIIG 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L Y T +A+ +DW+ E +Q + VQGNLDP+ L+ G +
Sbjct: 241 FPRGAGALLPGYVTETGVDAVSIDWTAEPGLVRERVQSKVAVQGNLDPLALITGGAALDQ 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGITP+ +V ++ VR+ K
Sbjct: 301 AVDDVLASYAGGRHIFNLGHGITPETPIAHVEQMLARVRAYK 342
>gi|328541696|ref|YP_004301805.1| Uroporphyrinogen decarboxylase [polymorphum gilvum SL003B-26A1]
gi|326411448|gb|ADZ68511.1| Uroporphyrinogen decarboxylase [Polymorphum gilvum SL003B-26A1]
Length = 319
Score = 315 bits (807), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 149/319 (46%), Positives = 204/319 (63%), Gaps = 2/319 (0%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K NFLD CY P+ E+TLQPIRRY FDA+ILFSDI V+ DA
Sbjct: 1 MMRQAGRYLPEYREARAKAPNFLDFCYNPDLATEVTLQPIRRYGFDASILFSDIFVVPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
+G VRF E GP ++P++ + + L +L P+ +++ LR +LP TL+GF
Sbjct: 61 IGYPVRFEEGRGPVLEPLSAKLVDGLEQG--RAEAHLEPVIETVRRLRAQLPGETTLLGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA Y ++G +D R+ +Y++ +D L S +YL+ Q+ AG D +
Sbjct: 119 CGAPWTVACYSVAGHTTQDQTAARIGSYRDPALLGRFIDQLVTASIQYLVRQLEAGADAV 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFDT AG L E F + I++ V+ + P AK I F K + L++Y T +
Sbjct: 179 QIFDTWAGVLDEDGFRRWCIEPTRAIVAGVKAQRPEAKVIGFPKASAARLESYIDGTGID 238
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
A+GLDW+VP + A +Q+ PVQGNLDPMRLV G + + DG++ +L LG GP IFNLGH
Sbjct: 239 AVGLDWTVPDTLARTVQRRVPVQGNLDPMRLVAGGKALDDGIDRVLSALGEGPLIFNLGH 298
Query: 324 GITPQVDPKNVLDLVKTVR 342
G+TP+ DP NV +V+ VR
Sbjct: 299 GVTPETDPDNVARMVERVR 317
>gi|115523333|ref|YP_780244.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisA53]
gi|122297168|sp|Q07S20|DCUP_RHOP5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115517280|gb|ABJ05264.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisA53]
Length = 348
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 219/342 (64%), Gaps = 4/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LEVL GN PP+W+MRQAGRYLPEYR++R K FLD+C+ E+ E+TLQPIRR
Sbjct: 8 KPFLEVLSGNRQASPPMWMMRQAGRYLPEYREVRAKAGGFLDLCFNAEFAAEVTLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILV+ ALGR+VRF EGPR+DP+ + ++ L IDL + L +F
Sbjct: 68 FGFDAAIIFSDILVVPYALGRSVRFEVGEGPRLDPLDSPDKVSTLTKAIDL--SKLQAVF 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ I R++LP TLIGFCG+P+TVA+YM++G D R AYQ+ AF ++D L
Sbjct: 126 DALRITRRELPPETTLIGFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKIIDVL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S +YL+AQ+ AG +V+QIFDT AG L EFE ++ RI+ VR+ P K I
Sbjct: 186 VESSIQYLLAQLEAGAEVLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGTKIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG ML + T + + +DW+ SF E +Q + VQGNLDP+ L+ G + +
Sbjct: 246 FPRGAGAMLPAFVERTGVDGVSIDWTAEPSFVREKVQSKVVVQGNLDPLVLIAGGAALDE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI P+ +V ++K VR+ K
Sbjct: 306 AVDDVLKNFSGGRHIFNLGHGIQPETPIAHVEQMLKRVRAFK 347
>gi|192290094|ref|YP_001990699.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris TIE-1]
gi|192283843|gb|ACF00224.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris TIE-1]
Length = 338
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 220/339 (64%), Gaps = 4/339 (1%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQPIRR+ F
Sbjct: 1 MEVLSGNRQASPPMWMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQPIRRFGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ ALGR+VRF EGPR+DP+ + ++ LN IDL + L P+F+++
Sbjct: 61 DAAIIFSDILVVPYALGRSVRFEVGEGPRLDPLNSPDLVGTLNNAIDL--SKLEPVFEAL 118
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
I+R++L TLIGFCG+P+TVA+YM++G D R+ AYQ+ AF ++D L +
Sbjct: 119 RIVRRELKPETTLIGFCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVES 178
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
S +YL+ Q+ AG DV+QIFDT AG L EFE + RI+ +R+ P K I F +
Sbjct: 179 SIQYLLRQLDAGADVLQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGTKIIGFPR 238
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GAG +L + T +A+ +DW+ +F E +Q + +QGNLDP+ L+ G + GV+
Sbjct: 239 GAGALLPAFVERTGVDAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGSALDQGVD 298
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L+ SG IFNLGHGITP +V ++K VR K
Sbjct: 299 DVLNNFSSGRHIFNLGHGITPDAPIAHVEQMIKRVRDYK 337
>gi|163745167|ref|ZP_02152527.1| uroporphyrinogen decarboxylase [Oceanibulbus indolifex HEL-45]
gi|161381985|gb|EDQ06394.1| uroporphyrinogen decarboxylase [Oceanibulbus indolifex HEL-45]
Length = 346
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 215/344 (62%), Gaps = 3/344 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + IL L G + PPIW+MRQAGRYLPEYR R K +FL +CY PE E+TLQPI
Sbjct: 3 KNKTILRALAGETLPTPPIWMMRQAGRYLPEYRATRAKAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLP 122
RRY FD +ILF+DIL++ ALG ++ FV EGPR+ ITT+ E+ L P D ++L P
Sbjct: 63 RRYGFDGSILFADILLVPQALGADLWFVTGEGPRLSTITTKAEMEALKP-ADAIHDHLAP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F+ L++
Sbjct: 122 IYETVRILSRELPEETTLIGFAGAPWTVATYMIAGKGTPDQGPAHALKDENPEVFDALME 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EYL QI AG +V+++FD+ AG L +F+ Y+ + +IISA++ ++P+
Sbjct: 182 RITLATIEYLDMQIQAGAEVVKLFDSWAGSLQGTDFDRYSTEPLRQIISALKARHPHVPI 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I+F +GAG N T ++ I +D V + E +Q G VQGNL +V G +
Sbjct: 242 IAFPRGAGARFANLHAATGADCIAIDDGVSAEWVAEHVQPNGCVQGNLKSSHMVTGGDAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ AI+D L GP IFNLGHGITP DP+NV ++ TVR +
Sbjct: 302 VQETRAIVDALSKGPHIFNLGHGITPDADPENVQLMIDTVRGTR 345
>gi|256253976|ref|ZP_05459512.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|261221116|ref|ZP_05935397.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|260919700|gb|EEX86353.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 273
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/271 (54%), Positives = 193/271 (71%), Gaps = 2/271 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIRR
Sbjct: 3 RKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P+++
Sbjct: 63 FGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWLE--TEGVAKRLEPVYE 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L+
Sbjct: 121 TVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDLA 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I F
Sbjct: 181 DVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIGF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
KGAG + YR T + +GLDWSVPLSFA
Sbjct: 241 PKGAGMLYAGYREKTGVDMLGLDWSVPLSFA 271
>gi|86751122|ref|YP_487618.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris HaA2]
gi|123003760|sp|Q2ISV3|DCUP_RHOP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86574150|gb|ABD08707.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris HaA2]
Length = 348
Score = 313 bits (801), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 219/342 (64%), Gaps = 4/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ + E+TLQPIRR
Sbjct: 8 KPFIEVLSGNRQASPPMWMMRQAGRYLPEYRATRAEAGSFLDLCFNAKLAAEVTLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILV+ ALGR VRF EGPR+DP+ + ++ LN IDL + L P+F
Sbjct: 68 FGFDAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLNSPDLVGTLNGAIDL--SKLEPVF 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ I+R +L TLIGFCGAP+TVA+YM++G D R+ AYQ+ AF ++D L
Sbjct: 126 EALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFARIIDVL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S +YL+ Q+ AG DV+QIFDT G L EFE + RI+ VR+ P AK I
Sbjct: 186 VESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVSPGAKIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG ML ++ T +A+ +DW+ + E +Q + VQGNLDP+ L+ G +
Sbjct: 246 FPRGAGAMLPDFIARTGVDAVSIDWTAEPNMIRERVQSKVAVQGNLDPLLLIAGGSALDQ 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GV+ +L +G IFNLGHGITP +V +VK VR+ K
Sbjct: 306 GVDDVLKNFSAGRHIFNLGHGITPDAPVAHVEQMVKRVRAYK 347
>gi|316935319|ref|YP_004110301.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris DX-1]
gi|315603033|gb|ADU45568.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris DX-1]
Length = 348
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 217/339 (64%), Gaps = 4/339 (1%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQPIRR+ F
Sbjct: 11 MEVLSGNRQASPPMWMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQPIRRFGF 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ ALGR VRF EGPR+DP+ T ++ L+ IDL + L P+FQ++
Sbjct: 71 DAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLDTPDKVGTLSSAIDL--SKLEPVFQAL 128
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
I+R +L TLIGFCG+P+TVA+YM++G D R+ AYQ+ AF ++D L +
Sbjct: 129 RIVRGELSPETTLIGFCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVES 188
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
S +YL+ Q+ AG DV+QIFDT AG L EFE + RI+ +R+ P K I F +
Sbjct: 189 SIQYLLKQLEAGADVLQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGTKIIGFPR 248
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GAG +L + T +A+ +DW+ +F E +Q + +QGNLDP+ L+ G + V+
Sbjct: 249 GAGALLPAFVERTGVDAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGSALDQAVD 308
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L+ +G IFNLGHGITP +V ++K VR K
Sbjct: 309 DVLNNFSAGRHIFNLGHGITPDASIAHVEQMIKRVRDYK 347
>gi|126725996|ref|ZP_01741838.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2150]
gi|126705200|gb|EBA04291.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2150]
Length = 343
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 213/339 (62%), Gaps = 3/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 5 KTMLRVLAGETLETPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
Y FDAAILF+DIL++ ALG +V FV EGPR+ IT+ + + L P D+ L PI+
Sbjct: 65 YGFDAAILFADILLVPQALGADVWFVTGEGPRLSTITSADDFGKLGPVADID-ETLSPIY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL+ +LP TLIGF GAPWTVA+YMI+G D G +N F+ L+D +
Sbjct: 124 ETIKILKSELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMMENPAVFDALIDRI 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + YL AQI AG +V+++FD+ AG L F Y+ RIISA++ K+PN I+
Sbjct: 184 TEATIHYLSAQISAGAEVVKLFDSWAGSLSGEAFLKYSLAPAKRIISALKAKHPNTPIIA 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +G G + + + T ++ I +D +A + +Q +GPVQGNL P +V G Q ++D
Sbjct: 244 FPRGGGDLNIGFAKATGADCIAIDQFTDADWAAKHVQCDGPVQGNLAPGHMVTGGQALVD 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V I +GP IFNLGHGITP DP NV ++ +R
Sbjct: 304 EVKRIKKAFANGPHIFNLGHGITPDADPDNVQRMIDALR 342
>gi|163796505|ref|ZP_02190465.1| uroporphyrinogen decarboxylase [alpha proteobacterium BAL199]
gi|159178355|gb|EDP62899.1| uroporphyrinogen decarboxylase [alpha proteobacterium BAL199]
Length = 340
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 210/336 (62%), Gaps = 3/336 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G ++ PP+W+MRQAGRYLPEYR++R + +F+D+C +PE E+TLQPIRRY
Sbjct: 6 LLRALAGETLDTPPLWMMRQAGRYLPEYRELRARAGSFVDLCLSPEMAAEVTLQPIRRYG 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPIFQS 126
FDAAILFSDIL++ LGR++RF E GP ++PI + I +L+P D F+ L PI ++
Sbjct: 66 FDAAILFSDILMVPYGLGRSLRFEEGRGPILEPIKDRSGIPVLDP--DTFIARLAPICET 123
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L LIGF GAPWTVASYM+ GG +D +++AY + F+ L+D L D
Sbjct: 124 VARVRSALGPETALIGFAGAPWTVASYMVEGGSSQDFAALKLWAYSDPDGFSVLMDTLVD 183
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ YL QI AG V+++FD+ AG E FE + + I+ + +P+ I FA
Sbjct: 184 ATVLYLDQQIRAGSQVVKLFDSWAGAAPESLFEKWVVQPTAAIVRRLATLHPDIPIIGFA 243
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GAG M + Y T A+ LD +PL+ A LQ E PVQGNLDP+ LV G + +
Sbjct: 244 RGAGVMTRGYGAATGVTALALDSGIPLAMACALQAERPVQGNLDPIALVAGGDALAAETD 303
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
ILD L GPF+FNLGHGI P +V LV VR
Sbjct: 304 RILDALSGGPFVFNLGHGILPHTPLAHVEALVARVR 339
>gi|91978232|ref|YP_570891.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB5]
gi|123748822|sp|Q132J9|DCUP_RHOPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91684688|gb|ABE40990.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB5]
Length = 348
Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 216/337 (64%), Gaps = 4/337 (1%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+EV+ G PP+W+MRQAGRYLPEYR R + +FLD+C+ P+ E+TLQPIRR+ F
Sbjct: 11 IEVISGKRQASPPMWMMRQAGRYLPEYRATRTEAGSFLDLCFNPKLAAEVTLQPIRRFGF 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ ALGR VRF EGPR+DP+ + ++ LN IDL L P+F+++
Sbjct: 71 DAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLNSPDLVGTLNGAIDL--GKLEPVFEAL 128
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
I+R +L TLIGFCGAP+TVA+YM++G D R+ AYQ+ AF ++D L +
Sbjct: 129 RIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVES 188
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
S +YL+ Q+ AG DV+QIFDT G L EFE + RI+ VR+ P+AK I F +
Sbjct: 189 SIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVKPDAKIIGFPR 248
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GAG +L + T +A+ +DW+ P ++Q + VQGNLDP+ L+ G + GV+
Sbjct: 249 GAGALLPAFIERTGVDAVSIDWTAEPKMVRDQVQTKVAVQGNLDPLLLIAGGSALDQGVD 308
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L +G IFNLGHGITP +V +VK VR+
Sbjct: 309 DVLKNFSAGRHIFNLGHGITPDASIAHVEQMVKRVRA 345
>gi|27377510|ref|NP_769039.1| uroporphyrinogen decarboxylase [Bradyrhizobium japonicum USDA 110]
gi|38257549|sp|Q89SK1|DCUP_BRAJA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27350654|dbj|BAC47664.1| uroporphyrinogen decarboxylase [Bradyrhizobium japonicum USDA 110]
Length = 344
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 210/340 (61%), Gaps = 4/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++VL G PP+W+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIRR
Sbjct: 7 KPFIDVLSGQRQAIPPMWMMRQAGRYLPEYREVRAKAGGFLDLCFNPELAAEVTLQPIRR 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-TQEIYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR+VRF EGPR++P+ ++ L P D L P+F
Sbjct: 67 FGFDAAIIFSDILVIPYALGRSVRFEVGEGPRLEPLDDPAKVATLAPRADF--GKLAPVF 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ I+R L LIGFCGAPWTVA+YM++G D R+ AY++ AF ++D L
Sbjct: 125 DALKIVRGALDPKTALIGFCGAPWTVATYMVAGHGTPDQAPARMMAYRHPDAFAKIIDVL 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D S EYL+AQ+ AG + +QIFDT AG L EF ++ RI+ VR K P+AK I
Sbjct: 185 VDNSIEYLLAQLAAGANALQIFDTWAGVLPPAEFARWSVEPTRRIVEGVRAKVPDAKIIG 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG L Y T N + +DW+ +F E +Q VQGNLDP+ L+ G +
Sbjct: 245 FPRGAGAQLPGYVEATGVNGVSIDWTAEPAFIRERVQSRVAVQGNLDPLVLITGGAALDR 304
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +L G FIFNLGHGI P+ +V ++K VR
Sbjct: 305 AVDNVLANFAQGRFIFNLGHGIQPETPIAHVEQMLKRVRG 344
>gi|119386337|ref|YP_917392.1| uroporphyrinogen decarboxylase [Paracoccus denitrificans PD1222]
gi|166234266|sp|A1B852|DCUP_PARDP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119376932|gb|ABL71696.1| uroporphyrinogen decarboxylase [Paracoccus denitrificans PD1222]
Length = 342
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 220/340 (64%), Gaps = 3/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L+G + PP+W+MRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIR
Sbjct: 3 EKTILRALKGERLPVPPVWMMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPI 123
RY FDAAILF+DIL++ ALG ++ FV EGPR+ +T+ + L P + + L P+
Sbjct: 63 RYGFDAAILFADILLLPQALGLDLWFVTGEGPRLSTVTSAAGVAALKPAAAIH-DTLSPV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP TLIGF GAPWTVA+YM++G D F ++ AF L+D
Sbjct: 122 YETVRILARELPRETTLIGFAGAPWTVATYMVAGRGTPDQAPAHAFKAEDRAAFAALIDR 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + +YL AQI AG +V+++FD+ AG L +F+++A RII+A++ ++P I
Sbjct: 182 ITEATIDYLSAQIEAGAEVVKLFDSWAGSLKGRDFDDFAVEPARRIIAALKARHPGIPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+F + AG + R T ++ + LD SV + A E+QK+G VQGNLDP LV G + ++
Sbjct: 242 AFPREAGPRYAGFARATGADCVALDNSVSADWAAAEVQKDGCVQGNLDPRLLVSGGEELV 301
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I+ GP IFNLGHGITP+ DP+NV +++ +R
Sbjct: 302 SETRRIVQAFSRGPHIFNLGHGITPEADPENVARMLEAIR 341
>gi|83952839|ref|ZP_00961569.1| uroporphyrinogen decarboxylase [Roseovarius nubinhibens ISM]
gi|83835974|gb|EAP75273.1| uroporphyrinogen decarboxylase [Roseovarius nubinhibens ISM]
Length = 355
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 213/345 (61%), Gaps = 3/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY + E+TL
Sbjct: 11 MTRSDKPILRALAGETLPTPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLATEVTL 70
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-TQEIYLLNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + L P D+
Sbjct: 71 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITDAQGLNALKPVSDIH-ET 129
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI+Q++ L LP+ TLIGF GAPWTVA+YMI+G D G +N F
Sbjct: 130 LNPIYQTLRNLSGALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENRPVFEA 189
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD +++ + EYL AQI AG +VI++FD+ AG L + +F YA RII+A++ ++P
Sbjct: 190 LLDRITEATIEYLSAQIDAGAEVIKLFDSWAGSLNDEDFAAYALAPAQRIIAALKARHPE 249
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I+F +GAG + + R T ++ + LD V ++ A +Q +G VQGNL +V G
Sbjct: 250 TPIIAFPRGAGPRYEGFARATGADCVALDDGVDAAWAAAHVQIDGCVQGNLASSHMVTGG 309
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ +AI+D L GP IFNLGHGITP DP NV ++ VR+
Sbjct: 310 EALVQETHAIVDALSHGPHIFNLGHGITPDADPDNVQRMIDAVRT 354
>gi|254439336|ref|ZP_05052830.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 307]
gi|198254782|gb|EDY79096.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 307]
Length = 349
Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 215/340 (63%), Gaps = 3/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L G V+ PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIR
Sbjct: 8 QKTILRALAGEVLATPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIR 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPI 123
RY FDA+ILF+DIL++ ALG N+ FV EGPR+ +TT E+ L P + + L PI
Sbjct: 68 RYGFDASILFADILLLPQALGANLWFVTGEGPRLSTVTTADELKALKP-VSAIHDTLSPI 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP+ +TLIGF GAPWTVA+YMI+G D G + F LLD
Sbjct: 127 YETVKILTRELPDDVTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKDTDKAVFEGLLDL 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + EYL AQI AG +V+++FD+ AG L F NYA + + RI++A+++++P+ I
Sbjct: 187 ITDGTIEYLSAQIDAGAEVVKLFDSWAGSLMGDNFINYAIKPMARIVAALKQRHPDTPII 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GA ++ I LD V +A +Q +G VQGNL +V G ++
Sbjct: 247 AFPRGADERYIGLHDAIGADCIALDDGVTAHWAAANVQTDGCVQGNLKSSHMVTGGDALV 306
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
AI+D L GP IFNLGHGITP +P+NV ++ TVR
Sbjct: 307 TETRAIVDALKGGPHIFNLGHGITPDANPENVQLMIDTVR 346
>gi|288959734|ref|YP_003450075.1| uroporphyrinogen decarboxylase [Azospirillum sp. B510]
gi|288912042|dbj|BAI73531.1| uroporphyrinogen decarboxylase [Azospirillum sp. B510]
Length = 341
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 212/337 (62%), Gaps = 2/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G V PP WLMRQAGRYLPEYR++R K +FLD+CY P++ VE+TLQP+RRY
Sbjct: 1 MLAALAGEVRPRPPFWLMRQAGRYLPEYRELRAKAGSFLDLCYNPDFAVEVTLQPLRRYG 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ ALG+ + ++E EGP++DP+ E L + D F L P+++++
Sbjct: 61 MDAAILFSDILVVPHALGQPLAYLEGEGPKLDPVRGVED-LKRLSRDRFHETLAPVYETV 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L +P TLIGF GAPWT+A YM+ G K++ + +AY + F L+D + +V
Sbjct: 120 RRLSTAIPEGTTLIGFAGAPWTIACYMVEGAGSKEYAHVKRWAYGDPAGFGRLIDLIVEV 179
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+A+YL QI AG + +Q+FD+ AG L EF + RI++ V+ K+P I F +
Sbjct: 180 TADYLCHQIEAGAETVQLFDSWAGVLPVDEFRRWVIEPTRRIVALVKAKHPRTPVIGFPR 239
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GAG+ + Y + +A+GLD +VP ++A LQ PVQGNLDP+ L G + +
Sbjct: 240 GAGHAYEEYVSQSGVDAVGLDTTVPPAWAARTLQTRLPVQGNLDPILLATGGKALETAAR 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL+ L GPF+FNLGHG+ P++V DL + +R
Sbjct: 300 GILEALAGGPFVFNLGHGVIQSTPPQHVADLTRILRE 336
>gi|83313649|ref|YP_423913.1| uroporphyrinogen decarboxylase [Magnetospirillum magneticum AMB-1]
gi|123540224|sp|Q2VYH1|DCUP_MAGSA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82948490|dbj|BAE53354.1| Uroporphyrinogen decarboxylase [Magnetospirillum magneticum AMB-1]
Length = 346
Score = 308 bits (789), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 207/346 (59%), Gaps = 2/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L G + PPP WLMRQAGRYLPEYR R + +FLD+CY + E+TL
Sbjct: 1 MSSSSKPFLRALAGETLTPPPFWLMRQAGRYLPEYRATRAEAGSFLDLCYNSDLACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY FDAAILFSDILV+ DAL ++V F E EGP + PI + E L ++ ++L
Sbjct: 61 QPLRRYGFDAAILFSDILVVPDALRQHVAFKEGEGPVLTPIRSAE-DLSGLDLSGLHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ L +P LIGF GAPWTVA+YMI G KD + + + F L
Sbjct: 120 APVYETVKKLSAAIPKTTALIGFAGAPWTVATYMIEGSGSKDFAKAKGMMFGQPELFARL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L + +YLI QI G + IQIFDT AG L E FE + + ++ +R + P
Sbjct: 180 MALLVQATGDYLIRQIDNGAEAIQIFDTWAGALPEDMFERWVIGTTRTLVERIRTERPGV 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAGY+ K Y T + + LD SVPL + A ELQ + VQGNLDP+ LV G +
Sbjct: 240 PVIGFPRGAGYLYKRYVAETKVSGVSLDPSVPLHWAAAELQPKCTVQGNLDPLLLVAGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ +L L GPFIFNLGHGITP P NV L + V+ K
Sbjct: 300 ALDAGIDRVLKALSKGPFIFNLGHGITPPTPPDNVARLAERVKGWK 345
>gi|159045245|ref|YP_001534039.1| uroporphyrinogen decarboxylase [Dinoroseobacter shibae DFL 12]
gi|189083004|sp|A8LIJ7|DCUP_DINSH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157913005|gb|ABV94438.1| uroporphyrinogen decarboxylase [Dinoroseobacter shibae DFL 12]
Length = 344
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 211/344 (61%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +RK K+L L G V PPIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MTDRK-KLLRSLDGEVQKVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL+I DALG ++ FV EGPR+ I T E + D ++L
Sbjct: 60 QPIRRYGFDAAILFADILLIPDALGADLWFVTGEGPRLSTIETMEEFNKLKPADEVHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP LIGF GAPWTVA+YMI+G D + F+ L
Sbjct: 120 APIYETVRILSRELPAETALIGFAGAPWTVATYMIAGRGTPDQAPAHKLMREAPEVFDAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L++ + YL QI AG + ++IFD+ AG L F YA +II+A++ K+P+
Sbjct: 180 MDRLTEATIAYLSMQIEAGAETVKIFDSWAGSLKGEAFTKYALEPTKKIIAALKTKHPDT 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + + T ++ + LD SV ++A E +Q +G VQGNL +V G Q
Sbjct: 240 PIIAFPREAGDGYIGFAKATGADCVALDNSVSAAWAAEHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ GP IFNLGHGITP DP+NV ++ TVRS
Sbjct: 300 ALVDETREIVQAFSKGPHIFNLGHGITPDADPENVQLMIDTVRS 343
>gi|23014739|ref|ZP_00054541.1| COG0407: Uroporphyrinogen-III decarboxylase [Magnetospirillum
magnetotacticum MS-1]
Length = 346
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 205/346 (59%), Gaps = 2/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L G + PPP WLMRQAGRYLPEYR R + +FLD+CY + E+TL
Sbjct: 1 MSSPSKPFLRALAGETLTPPPFWLMRQAGRYLPEYRATRAEAGSFLDLCYNSDLACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY FDAAILFSDILV+ DAL ++V F E EGP + PI + E L +I ++L
Sbjct: 61 QPLRRYGFDAAILFSDILVVPDALRQHVAFKEGEGPVLTPIRSAE-DLSGLDISGLHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++ ++ L +P LIGF GAPWTVA+YMI G KD + + + F L
Sbjct: 120 APVYDTVKKLSAAIPKTTALIGFAGAPWTVATYMIEGSGSKDFAKAKTMMFGQPELFARL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + +YLI QI G + IQIFDT AG L E FE + ++ +R + P
Sbjct: 180 MDLLVRATGDYLIRQIDNGAEAIQIFDTWAGALPEDMFERWVIGPTRALVERIRAERPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAG + K Y T + + LD SVPL + A ELQ VQGNLDP+ LV G +
Sbjct: 240 PVIGFPRGAGILYKRYVTETKVSGVSLDPSVPLDWAAAELQPLCTVQGNLDPLLLVAGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ IL VL GPFIFNLGHGITP P NV L + V+ K
Sbjct: 300 ALDSGIDRILKVLSKGPFIFNLGHGITPPTPPDNVARLAERVKGWK 345
>gi|260431648|ref|ZP_05785619.1| uroporphyrinogen decarboxylase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415476|gb|EEX08735.1| uroporphyrinogen decarboxylase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 344
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 210/343 (61%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E K K+L L G V++ PPIW+MRQAGRYLPEYR R++ +FL +CYTP+ E+TL
Sbjct: 1 MAENK-KLLRALAGEVLDTPPIWMMRQAGRYLPEYRATREQAGDFLSLCYTPDLAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + +D L
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITQQSDFDALKPVDAIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D +N+ F L
Sbjct: 120 SPVYETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALREENTALFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ + EYL AQI +G +V++IFD+ AG L F YA I A++ ++P
Sbjct: 180 LDRITAATIEYLSAQIESGAEVVKIFDSWAGSLKGEAFTKYAVEPCRIITRALKDRHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A E +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGEGYVGFAKATGVDCVALDNSVAPEWAAEHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++D + I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 300 ALVDETHRIVRAFSKGPHIFNLGHGITPDADPGNVQLMIDTVR 342
>gi|299134348|ref|ZP_07027541.1| uroporphyrinogen decarboxylase [Afipia sp. 1NLS2]
gi|298591095|gb|EFI51297.1| uroporphyrinogen decarboxylase [Afipia sp. 1NLS2]
Length = 348
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 211/345 (61%), Gaps = 2/345 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + ++VL G PPIW+MRQAGRYLPEYR +R+K FLD+ Y PE E+TLQ
Sbjct: 4 DSSAKPFIDVLSGQRQTVPPIWMMRQAGRYLPEYRAVREKAGGFLDLVYNPELAAEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
PIRR+ FDAAI+FSDILV+ ALGR+VRF EGPR+DP+ T E F +
Sbjct: 64 PIRRFGFDAAIIFSDILVVPHALGRDVRFEVGEGPRLDPLDTPEKIAAEKFSANFATFE- 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+++++ +R +L ++ LIGFCGAPWTVA+YM++G D R+ AY++ +AF ++
Sbjct: 123 PVYEALRRVRSELAPNVALIGFCGAPWTVATYMVAGHGTPDQAPARLLAYRDPKAFAKII 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D + + S YL+ Q+ AG +V+QIFDT AG L EF ++ RI+ VR K P AK
Sbjct: 183 DAIVETSIRYLLGQLAAGAEVLQIFDTWAGVLPPAEFTRWSIEPTRRIVEGVRAKVPGAK 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F +GAG ML Y T +A+ +DW+ SF E +Q +QGNLDP+ L+ G
Sbjct: 243 IIGFPRGAGAMLPAYVTRTGVDAVSIDWASEPSFMREYVQSRVALQGNLDPLALIAGGDA 302
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +L G IFNLGHGI P +V ++ VR+ K
Sbjct: 303 LDKAVDDVLANYAGGRLIFNLGHGIQPNTPIAHVERMIARVRAYK 347
>gi|255262906|ref|ZP_05342248.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
gi|255105241|gb|EET47915.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
Length = 344
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 210/340 (61%), Gaps = 3/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIR
Sbjct: 4 QKTVLRALSGEALPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPI 123
RY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT ++ L P D+ ++L PI
Sbjct: 64 RYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTADQLAALKPAADVN-DHLSPI 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++I IL K LP TLIGF G+PWTVA+YMI+G D G +N F+ L+D
Sbjct: 123 YETIKILSKSLPVGTTLIGFAGSPWTVATYMIAGQGTPDQGPAHALKDENRLVFDGLIDI 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL AQI AG +VI++FD+ AG L +F Y+ + +I SA++ YP+ I
Sbjct: 183 ITDATIVYLSAQIEAGAEVIKLFDSWAGSLHGDDFAQYSIAPMRKITSALKSAYPDVPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GAG N ++ I LD V +A + +Q G VQGNL +V G ++
Sbjct: 243 AFPRGAGEKYGNLHTAIGADCIALDDGVSADWAAKNVQTGGCVQGNLASRHMVTGGDALV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I+D GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 303 AETRKIVDAFSGGPHIFNLGHGITPDADPENVQLMIDTVR 342
>gi|209886239|ref|YP_002290096.1| uroporphyrinogen decarboxylase [Oligotropha carboxidovorans OM5]
gi|209874435|gb|ACI94231.1| uroporphyrinogen decarboxylase [Oligotropha carboxidovorans OM5]
Length = 347
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 208/342 (60%), Gaps = 2/342 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+VL G PPP+W+MRQAGRYLPEYR +R+K FLD+ Y P++ E+TLQPIR
Sbjct: 6 SKPFLDVLSGQRQVPPPLWMMRQAGRYLPEYRAVREKAGGFLDLVYNPDFAAEVTLQPIR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAI+FSDILV+ ALGR+VRF EGPR+ P+ T E P L P++
Sbjct: 66 RFGFDAAIIFSDILVVPHALGRDVRFEVGEGPRLTPLDTPEKVAAEP-FSANLATFEPVY 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R++L LIGFCGAPWTVA+YM++G D R+ AY AF ++D L
Sbjct: 125 EALRRVRRELAPETALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYSAPEAFAKIIDAL 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S YL+ Q+ AG +V+QIFDT AG L EF ++ RI+ VR + P+AK I
Sbjct: 185 VETSIPYLVGQLRAGAEVLQIFDTWAGVLPPAEFARWSIAPTRRIVEGVRAQVPDAKIIG 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L Y T +A+ +DW+ S E +Q +QGNLDP+ L+ G +
Sbjct: 245 FPRGAGALLPAYIAETGVDAVSIDWTAEPSLMRERVQSRVALQGNLDPLALIAGGDTLDR 304
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI PQ +V +V VR+ K
Sbjct: 305 AVDDVLANYAGGRLIFNLGHGILPQTPIAHVERMVARVRAFK 346
>gi|254509694|ref|ZP_05121761.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium KLH11]
gi|221533405|gb|EEE36393.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium KLH11]
Length = 345
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 207/346 (59%), Gaps = 3/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L L G V + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MMAETKTLLRALAGEVQDVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + L P D+
Sbjct: 61 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITQQSDFDALKPVEDIH-ET 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+++++ IL + LP+ TLIGF GAPWTVA+YMI+G D G +N+ F
Sbjct: 120 LAPVYETVRILSRALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALREENTALFEA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD ++ + EYL AQI AG +V++IFD+ AG L F+ YA I AV+ ++P
Sbjct: 180 LLDRITAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFQKYAVEPCRTITQAVKARHPG 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV +A E +Q + VQGNL +V G
Sbjct: 240 IPVIGFPRQAGAGYVGFAKATGVDCVALDNSVSPDWAAENVQTDVCVQGNLASSHMVTGG 299
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
Q ++D I+ GP IFNLGHGITP DP NV ++ TVR +
Sbjct: 300 QALVDETRQIIKAFSKGPHIFNLGHGITPDADPGNVQLMIDTVRGK 345
>gi|21328660|gb|AAM48666.1| uroporphyrinogen decarboxylase [uncultured marine proteobacterium]
Length = 344
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 211/345 (61%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M RK IL L G + PIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MTSRK-VILRALAGETLPTAPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQE + L P D+ +
Sbjct: 60 QPIRRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTVTTQEDFAKLKPADDIH-AH 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ IL ++LP TLIGF G+PWTVA+YMI+G D G +N F+
Sbjct: 119 LAPIYKTVKILSEELPEATTLIGFAGSPWTVATYMIAGQGTADQGPAHRLKAENPAVFDS 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D +++ + YL AQI AG +V+++FD+ AG L +F Y+ + RI +A++ K+P+
Sbjct: 179 LIDLITEGTIHYLSAQIEAGAEVVKLFDSWAGSLKGEDFMKYSIEPMRRITAALKAKFPD 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I+F +GAG R+ ++ I D + + A LQ EG VQGNL +V G
Sbjct: 239 VPIIAFPRGAGEKYAGLHRMIGADCIAFDDGIDAQWVAANLQPEGCVQGNLASSHMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I L GP IFNLGHGITP DP+NV ++ TVRS
Sbjct: 299 AALVAETKRIAGALSKGPHIFNLGHGITPDADPQNVQLMIDTVRS 343
>gi|323135824|ref|ZP_08070907.1| uroporphyrinogen decarboxylase [Methylocystis sp. ATCC 49242]
gi|322398915|gb|EFY01434.1| uroporphyrinogen decarboxylase [Methylocystis sp. ATCC 49242]
Length = 324
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/325 (46%), Positives = 209/325 (64%), Gaps = 3/325 (0%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+WLMRQAGRYLPEYR +R K K+FLD CYTP E+TLQP+RR++FDAAILFSDILVI
Sbjct: 1 MWLMRQAGRYLPEYRALRAKAKSFLDFCYTPAMAAEVTLQPVRRFHFDAAILFSDILVIP 60
Query: 82 DALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
DA+G+ V F GPR+DPI T E D+ L P+F++I ++ +LP + I
Sbjct: 61 DAMGQTVSFETGSGPRLDPIETPEGISRLGAFDI--TKLSPVFETIDRVKSELPADVAFI 118
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GFCGAPWTVASYMI+G D R+FA+++ AF+ L+D L D S +YL+ QI AGV+
Sbjct: 119 GFCGAPWTVASYMIAGQGTPDQAPARLFAFRHPEAFSSLIDRLVDASVDYLVRQIDAGVE 178
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
V+QIFD+ AG L +EFE ++AR + R+I+A++ + PN I+F +GA L +
Sbjct: 179 VVQIFDSWAGVLPANEFEAWSARPIARMIAALKTQRPNVPVIAFVRGADAQLPRLTKTLH 238
Query: 262 SNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
++ GLD ++ P A +QGNLDP+ L+ G + +++IL P IFN
Sbjct: 239 ADGYGLDTALDPKWAAANTAANVCLQGNLDPLALIAGGAALDREIDSILGAFAGRPHIFN 298
Query: 321 LGHGITPQVDPKNVLDLVKTVRSEK 345
LGHGI PQ ++V LV+ VR +
Sbjct: 299 LGHGILPQTPIEHVERLVERVRGAR 323
>gi|296444998|ref|ZP_06886959.1| uroporphyrinogen decarboxylase [Methylosinus trichosporium OB3b]
gi|296257419|gb|EFH04485.1| uroporphyrinogen decarboxylase [Methylosinus trichosporium OB3b]
Length = 344
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 218/345 (63%), Gaps = 5/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E K ++ VL+G + PP+WLMRQAGR+LPEYR++R +FLD CY PE +TL
Sbjct: 1 MGEEK-PLIAVLRGEALPVPPVWLMRQAGRFLPEYRELRAHAGSFLDTCYNPEIAARITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNY 119
QPI R+ FDAAILFSDILV+ DALG+ V F GP+++PI +++ L P D +
Sbjct: 60 QPIERFGFDAAILFSDILVVPDALGQKVSFESGHGPKLEPIGEPKDLERLAPVFDA--DR 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P++++I+ ++++LP + IGFCGAPWTVASYMI+G D R+FAY++ AF
Sbjct: 118 LAPVYETIARVKRELPERVAFIGFCGAPWTVASYMIAGEGTPDQAPARLFAYRHPEAFGR 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L D S YL QI AGV+ +QIFD+ AG L EFE + + RII+ ++++ P
Sbjct: 178 LIDRLVDASIAYLTRQIDAGVEALQIFDSWAGVLPPQEFERWVVSPLQRIIAELKQRRPA 237
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I+F +GAG L + + ++A+GLD VP +A E+ +QGNLDP+ LV G
Sbjct: 238 VPIIAFVRGAGPHLPDLAQRLGADALGLDTFVPPQWAAREVSGGVALQGNLDPLALVAGG 297
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +AIL+ P IFNLGHG+ P+ +V LV +R+
Sbjct: 298 EALDRQTDAILEAFAGRPHIFNLGHGVLPETPLDHVARLVDRIRN 342
>gi|154245770|ref|YP_001416728.1| uroporphyrinogen decarboxylase [Xanthobacter autotrophicus Py2]
gi|154159855|gb|ABS67071.1| uroporphyrinogen decarboxylase [Xanthobacter autotrophicus Py2]
Length = 348
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 214/347 (61%), Gaps = 8/347 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
E + L VL G ++PPP+W+MRQAGRYLPEYR +R + +FL +CYTP+ E+TLQP
Sbjct: 6 ETRSPFLRVLDGTPLDPPPLWMMRQAGRYLPEYRAVRAEAGDFLTLCYTPKLAAEVTLQP 65
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLL 121
IRRY FDAAI+FSDILV+ ALG + F EGPR+ P+T Q + L+ +D + +
Sbjct: 66 IRRYGFDAAIIFSDILVVPHALGVGLTFEAGEGPRLTPVTDQAGVAALSDRLD--PDKVD 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P++++I+ +R LP + LIGFCGAPWTVA+YM++G D R+ A ++ F L+
Sbjct: 124 PVYEAIASVRATLPAEVALIGFCGAPWTVATYMVAGHGTDDQAPARMLALRDEALFQSLI 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L + S +L Q+ AG DV+QIFDT AG L FE + A + RI++ ++ +P+ +
Sbjct: 184 DRLVEASIVHLAGQVAAGADVVQIFDTWAGVLDPSSFERWCAEPLRRIVAGLKALHPHVR 243
Query: 242 FISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I+F KGA L+ RL D+ NAIGLDWS A L +QGNLDP+RL+ G
Sbjct: 244 VIAFPKGA--TLEALERLADTGINAIGLDWSADRQAARRRLSGRVALQGNLDPLRLIAGG 301
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V I D IFNLGHGI P+ +V LV+ VR +
Sbjct: 302 AALEDEVARIRDDFSGARHIFNLGHGIRPETPLDHVEKLVEAVRRAR 348
>gi|254459889|ref|ZP_05073305.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2083]
gi|206676478|gb|EDZ40965.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium
HTCC2083]
Length = 343
Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 212/341 (62%), Gaps = 3/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY E E+TLQPIR
Sbjct: 4 QKTILRALSGETLPTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELATEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPI 123
RY FDA+ILF+DIL++ ALG ++RF EGPR+ ITT+ E+ L P D+ ++L P+
Sbjct: 64 RYGFDASILFADILLVPQALGADLRFETGEGPRLSTITTRAELDALKPADDIH-DHLSPV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++++ L K LP+ TLIGF GAPWTVA+YMI G D +N F +LD
Sbjct: 123 YETVNRLSKALPDETTLIGFAGAPWTVATYMIGGKGTPDQAPAHALKAENLPVFEGVLDR 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + YL QI AG +VI+IFD+ AG L +F+ Y+ + +I+ V+ +PN I
Sbjct: 183 ITEATIAYLNKQIEAGAEVIKIFDSWAGSLKGDDFDKYSLAPMRKIVDGVKAAHPNTPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GAG K ++ I D +V + A +Q +G VQGNL +V G + ++
Sbjct: 243 AFPRGAGERYKGAHAAIGADCIAFDDAVSAEWVAQNVQPDGCVQGNLASSHMVTGGETLV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+DVL +GP IFNLGHGITP DP+NV ++ TVR+
Sbjct: 303 SETRRIVDVLSNGPHIFNLGHGITPDADPENVQLMIDTVRA 343
>gi|85705299|ref|ZP_01036398.1| uroporphyrinogen decarboxylase [Roseovarius sp. 217]
gi|85670172|gb|EAQ25034.1| uroporphyrinogen decarboxylase [Roseovarius sp. 217]
Length = 360
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/344 (44%), Positives = 210/344 (61%), Gaps = 3/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY + E+TL
Sbjct: 16 MMPAQKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREQAGDFLSLCYNSDLATEVTL 75
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT + + L P +D
Sbjct: 76 QPIRRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITDRAGLEKLKP-VDEIHEV 134
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P++Q++ L LP TLIGF GAPWTVA+YMI+G D G +N F
Sbjct: 135 LNPVYQTVRNLAGALPKDTTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKEVFEG 194
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++D L+ + EYL AQI AG +VI++FD+ AG L +FENYA RIIS ++ ++P
Sbjct: 195 IIDRLTAGTIEYLSAQIEAGAEVIKLFDSWAGSLKGDDFENYAVAPAKRIISELKARHPG 254
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I+F + AG + T ++ + +D SV ++A E +QK+G VQGNL +V G
Sbjct: 255 IPIIAFPREAGDNYMGFHAKTGADCVAVDDSVSAAWAAENVQKDGCVQGNLKSSHMVTGG 314
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ AI+D GP IFNLGHGITP DP NV ++ TVR
Sbjct: 315 DALVRETRAIVDAFRKGPHIFNLGHGITPDADPDNVQVMIDTVR 358
>gi|90422769|ref|YP_531139.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB18]
gi|90104783|gb|ABD86820.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB18]
Length = 325
Score = 302 bits (773), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 211/326 (64%), Gaps = 4/326 (1%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W+MRQAGRYLPEYR++R K FLD+C+ E+ E+TLQPIRR+ FDAAI+FSDILV+
Sbjct: 1 MWMMRQAGRYLPEYREVRAKAGGFLDLCFNAEFAAEVTLQPIRRFGFDAAIIFSDILVVP 60
Query: 82 DALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
ALGR VRF EGPR++P+ + ++ L+ IDL + L P+F ++ I+R++LP L
Sbjct: 61 YALGRAVRFEVGEGPRLEPLDSPDKVGTLSKAIDL--SKLQPVFDALKIVRRELPAETAL 118
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCG+P+TVA+YM++G D R AYQ+ AF ++D L + S YL+AQ+ AG
Sbjct: 119 IGFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKIIDVLVESSISYLLAQLDAGA 178
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
+V+QIFDT AG L EFE ++ RI+ VR+ P AK I F +GAG ML + T
Sbjct: 179 EVLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGAKIIGFPRGAGAMLPAFVERT 238
Query: 261 DSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
+ + +DW+ SF E +Q + VQGNLDP+ L+ G + + V+ +L+ G IF
Sbjct: 239 GVDGVSIDWTAEPSFVREKVQSKVVVQGNLDPLVLIAGGAALDEAVDDVLNSYSGGRHIF 298
Query: 320 NLGHGITPQVDPKNVLDLVKTVRSEK 345
NLGHGI P+ +V ++K VR K
Sbjct: 299 NLGHGIQPETPIAHVEQMIKRVRDYK 324
>gi|89056337|ref|YP_511788.1| uroporphyrinogen decarboxylase [Jannaschia sp. CCS1]
gi|122497584|sp|Q28KJ9|DCUP_JANSC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|88865886|gb|ABD56763.1| uroporphyrinogen decarboxylase [Jannaschia sp. CCS1]
Length = 343
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 206/340 (60%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+K+L L G ++ PP+WLMRQAGRYLPEYR R + +FL +CY PE E+TLQPIR
Sbjct: 4 KKKLLRSLAGEAMDVPPVWLMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++FDA+ILF+DIL+I ALG N+ FV EGPR+ IT D L PI+
Sbjct: 64 RFDFDASILFADILLIPQALGANLWFVTGEGPRLSTITDASGMARMKTADDIHETLNPIY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ IL ++LP TLIGF GAPWTVA+YMI+G D + F+ L+D +
Sbjct: 124 ETVKILAQELPKETTLIGFAGAPWTVATYMIAGRGTPDQAPAHKLREGDPETFDKLMDLI 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL Q+ AG +V+++FD+ AG L F+ YA RIIS ++ ++P+ I+
Sbjct: 184 TAATIEYLDMQVQAGAEVVKLFDSWAGSLKGEAFDKYALAPAKRIISELKSRHPDLPIIA 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F + AG + ++ + +D SV +A E LQ +G VQGNLDP +V G + +
Sbjct: 244 FPREAGEKYIGFANAVGADCLAIDTSVDAIWAAENLQTDGCVQGNLDPKLMVTGGEALAS 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I D L GP IFNLGHGITP DP+NV L+ +RS
Sbjct: 304 EARRIRDALKGGPHIFNLGHGITPDADPENVHILLDAIRS 343
>gi|149204075|ref|ZP_01881043.1| uroporphyrinogen decarboxylase [Roseovarius sp. TM1035]
gi|149142517|gb|EDM30562.1| uroporphyrinogen decarboxylase [Roseovarius sp. TM1035]
Length = 344
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 211/341 (61%), Gaps = 3/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY + E+TLQPIR
Sbjct: 4 QKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREEAGDFLSLCYNSDLATEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPI 123
RY FDAAILF+DIL++ ALG ++ FV EGPR+ IT + + L P D+ L P+
Sbjct: 64 RYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITDRAGLEKLKPVADIH-ETLNPV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+Q++ L LP TLIGF GAPWTVA+YMI+G D G +N F +++
Sbjct: 123 YQTVRNLAGALPKETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKEVFEGIIER 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ + EYL AQI AG +VI++FD+ AG L +FENYA RIIS ++ ++P I
Sbjct: 183 LTEGTIEYLSAQIAAGAEVIKLFDSWAGSLKGDDFENYAVAPAKRIISELKARHPGIPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F + AG + + T ++ + +D SV +A E +QK+G VQGNL +V G + ++
Sbjct: 243 AFPREAGDNYRGFHAKTGADCVAVDDSVSAQWAAENVQKDGCVQGNLKSSHMVTGGEALV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI+D GP IFNLGHGITP +P NV ++ TVR
Sbjct: 303 RETRAIVDAFAKGPHIFNLGHGITPDANPDNVQLMIDTVRG 343
>gi|86139101|ref|ZP_01057672.1| uroporphyrinogen decarboxylase [Roseobacter sp. MED193]
gi|85824332|gb|EAQ44536.1| uroporphyrinogen decarboxylase [Roseobacter sp. MED193]
Length = 344
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/345 (45%), Positives = 212/345 (61%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K KIL L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQK-KILRALAGETQDVPPIWMMRQAGRYLPEYRATRAQAGDFLKLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ I+T+ + L P D+
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTISTEADFAKLGPVSDIH-ET 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F
Sbjct: 119 LNPIYETVKILSRELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKQENRPLFEA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +++ + +YL QI AG +V++IFD+ AG L +F YA I +A+++++P
Sbjct: 179 LLARITEATIDYLSKQIEAGAEVVKIFDSWAGSLKGEDFRKYALEPCREITAALKQRHPG 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV PL A LQ +G VQGNL +V G
Sbjct: 239 IPVIGFPREAGEKYLGFAKETGIDCLALDNSVDPLWAAQNLQVDGCVQGNLASRHMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q ++D AI+ +GP IFNLGHGITP DP NV ++ TVR
Sbjct: 299 QDLVDETRAIVQAFKNGPHIFNLGHGITPDADPDNVQLMIDTVRG 343
>gi|255261783|ref|ZP_05341125.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
gi|255104118|gb|EET46792.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
Length = 343
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 213/342 (62%), Gaps = 3/342 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIF 124
Y FDAAILF+DIL+I ALG ++ FV EGPR+ +T+ ++ L P D+ +L P++
Sbjct: 63 YGFDAAILFADILLIPQALGADLWFVTGEGPRLSTVTSADDLKKLKPATDIHY-HLSPVY 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F LLD +
Sbjct: 122 ETVRILSRELPSETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKNENREVFVALLDLI 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + Y+ AQI AG +V++IFD+ AG L +F+++A +II+A++ K+P I+
Sbjct: 182 TDATINYMSAQIEAGAEVVKIFDSWAGSLSAQDFQDFAIAPAIKIIAALKAKHPGVPIIA 241
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG T ++ + LD V +A + +Q +G +QGNL +V G ++
Sbjct: 242 FPRGAGEAYVGLHAATGADCVALDDGVTAEWAAKHVQVDGCIQGNLKSSHMVTGGDALVS 301
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D GP IFNLGHGITP DP+NV ++ TVR +
Sbjct: 302 ETRRIVDAFKGGPHIFNLGHGITPDADPENVQLMIDTVREAR 343
>gi|39934581|ref|NP_946857.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris CGA009]
gi|39648430|emb|CAE26951.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris CGA009]
Length = 325
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 212/326 (65%), Gaps = 4/326 (1%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQPIRR+ FDAAI+FSDILV+
Sbjct: 1 MWMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQPIRRFGFDAAIIFSDILVVP 60
Query: 82 DALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
ALGR+VRF EGPR+DP+ + ++ LN IDL + L P+F+++ I+R++L TL
Sbjct: 61 YALGRSVRFEVGEGPRLDPLNSPDLVGTLNNAIDL--SKLEPVFEALRIVRRELKPETTL 118
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCG+P+TVA+YM++G D R+ AYQ+ AF ++D L + S +YL+ Q+ AG
Sbjct: 119 IGFCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVESSIQYLLKQLDAGA 178
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DV+QIFDT AG L EFE + RI+ +R+ P K I F +GAG +L + T
Sbjct: 179 DVLQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGTKIIGFPRGAGALLPAFVERT 238
Query: 261 DSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
+A+ +DW+ +F E +Q + +QGNLDP+ L+ G + GV+ +L+ SG IF
Sbjct: 239 GVDAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGSALDQGVDDVLNNFSSGRHIF 298
Query: 320 NLGHGITPQVDPKNVLDLVKTVRSEK 345
NLGHGITP +V ++K VR K
Sbjct: 299 NLGHGITPDAPIAHVEQMIKRVRDYK 324
>gi|170750688|ref|YP_001756948.1| uroporphyrinogen decarboxylase [Methylobacterium radiotolerans JCM
2831]
gi|170657210|gb|ACB26265.1| uroporphyrinogen decarboxylase [Methylobacterium radiotolerans JCM
2831]
Length = 392
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/372 (42%), Positives = 223/372 (59%), Gaps = 34/372 (9%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++K+L VL+G I PPP W+MRQAGRYLPEYR R + +FLD+CY+P++ VE+TLQPIR
Sbjct: 22 ERKVLRVLEGEAIGPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYSPDFAVEVTLQPIR 81
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLP 122
R+ FDAAILFSDILV+ ALG++VRFVE EGPR+DP+ + + L +++L P
Sbjct: 82 RFGFDAAILFSDILVVPHALGQDVRFVEGEGPRLDPLDGRAAFARLREAGDPAVMSHLAP 141
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++++ LR +LP TL+GFCGAPWTVASYMI G D R A ++ + L+D
Sbjct: 142 VFETVTRLRAELPGETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAEGDTALVDTLID 201
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL--------GEHE----------------- 217
L V EYL+ Q+ AG D +QIF++HAG L G E
Sbjct: 202 RLVAVQTEYLVRQLEAGADAVQIFESHAGTLPLAVLAPGGTVEPVGDVAESALPGAAAAD 261
Query: 218 -FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL 273
++ R + R+++ VR + P AK I FA+G+G L + R+ T ++A+G+DW V L
Sbjct: 262 ALTRWSLRPIARMVAGVRARVPGAKIIVFARGSG--LDGHARVVPETGADAVGVDWGVDL 319
Query: 274 SFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+ V QGNL P L+ G + V+A+L+ P IFNLGHGITPQ
Sbjct: 320 KALRQTVPAATVTQGNLHPETLIAGGAALDAAVDAVLEATAGLPHIFNLGHGITPQTPVA 379
Query: 333 NVLDLVKTVRSE 344
+V ++ +R +
Sbjct: 380 HVERMLARLRGQ 391
>gi|220921274|ref|YP_002496575.1| uroporphyrinogen decarboxylase [Methylobacterium nodulans ORS 2060]
gi|219945880|gb|ACL56272.1| uroporphyrinogen decarboxylase [Methylobacterium nodulans ORS 2060]
Length = 360
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 211/355 (59%), Gaps = 15/355 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L VL G ++PPP W+MRQAGRYLPEYR++R K +FLD+CYTP++ E+TLQ
Sbjct: 8 TQAARPVLRVLGGEALSPPPAWMMRQAGRYLPEYRELRAKAGSFLDLCYTPDFATEVTLQ 67
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNY 119
PIRR+ F+AAILFSDILV+ ALG+ VRFVE EGPR+D + + + L + +
Sbjct: 68 PIRRFGFEAAILFSDILVVPHALGQEVRFVEGEGPRLDALADRAAFAGLREAGDPRIMAH 127
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+F+++S LR LP TL+GFCGAPWTVASYMI G D R A ++
Sbjct: 128 LAPVFETVSRLRAALPRETTLLGFCGAPWTVASYMIGGRGTPDLAPARDLAGRDPALLAA 187
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL-----GE--HEFENYAARSVGRIISA 232
L+D L VS +YL+ Q AG D +QIF++H G L GE ++ + RI+S
Sbjct: 188 LIDRLVAVSTDYLVRQFEAGADAVQIFESHGGTLPAVPAGEAGDALARWSLEPIARIVSG 247
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGPVQGN 288
VR + P A+ I F +G G L + R T ++A+G+DW V L + L QGN
Sbjct: 248 VRARVPGARIIVFPRGTG--LDGHARALAETGADAVGVDWEVDLAALRGRLPGRAVTQGN 305
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L P L+ G + V+AIL P IFNLGHGITP+ +V ++ +R
Sbjct: 306 LHPQTLIAGGAALDAAVDAILAATAGLPHIFNLGHGITPETPIPHVERMLARLRG 360
>gi|163733940|ref|ZP_02141382.1| uroporphyrinogen decarboxylase [Roseobacter litoralis Och 149]
gi|161393051|gb|EDQ17378.1| uroporphyrinogen decarboxylase [Roseobacter litoralis Och 149]
Length = 344
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 207/343 (60%), Gaps = 7/343 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 5 KTILRSLAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNP--NIDLFLNYLLP 122
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITTQ + L P ID LN P
Sbjct: 65 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTQADFDKLKPVGEIDAVLN---P 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++++ ILR++LP TLIGF GAPWTVA+YMI+G D +N F LL
Sbjct: 122 IYETVRILRQELPQETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALKDENRELFEALLA 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EYL QI AG +V++IFD+ AG L +F+ YA I +A++ ++P+
Sbjct: 182 RITQGTIEYLSKQIEAGAEVVKIFDSWAGSLKGADFQKYALEPAREITAAIKARHPDTPV 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q +
Sbjct: 242 IGFPREAGDGYIGFAKATGVDCVALDNSVSADWAAANVQVDGCVQGNLASSHMVTGGQAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
ID AI+ GP IFNLGHGITP DP NV ++ VR +
Sbjct: 302 IDETRAIVKAFSGGPHIFNLGHGITPDADPDNVQRMIDAVRGQ 344
>gi|163740379|ref|ZP_02147773.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis 2.10]
gi|161386237|gb|EDQ10612.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis 2.10]
Length = 348
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 210/345 (60%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K K+L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 5 MAEQK-KLLRALAGETQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNPELATEVTL 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + L P D+
Sbjct: 64 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTEADFAKLGPVSDIH-ET 122
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ +L LP TLIGF GAPWTVA+YMI+G D G + +N+ F
Sbjct: 123 LNPIYETVRLLSSALPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHLMRQENNALFEA 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +++ + EYL QI AG +V++IFD+ AG L FE YA +I A+++++P
Sbjct: 183 LLARITEATIEYLSMQIKAGAEVVKIFDSWAGSLSGEAFEKYALEPCRQITEALKQRHPG 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV P A +Q +G VQGNL +V G
Sbjct: 243 IPVIGFPREAGDKYVGFAKATGVDCVALDNSVDPEWAAAHVQVDGCVQGNLASRHMVTGG 302
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q ++D I+ G+GP IFNLGHGITP DP NV ++ VR
Sbjct: 303 QELVDDTRRIVKAFGNGPHIFNLGHGITPDADPDNVQRMIDAVRG 347
>gi|83941601|ref|ZP_00954063.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. EE-36]
gi|83847421|gb|EAP85296.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. EE-36]
Length = 349
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 208/344 (60%), Gaps = 3/344 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQ
Sbjct: 5 DTQSKTILRSLAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELATEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYL 120
PIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + L P D+ L
Sbjct: 65 PIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDQLRPVGDIH-ETL 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI+Q++ L +LP TLIGF GAPWTVA+YMI+G KD G + Q++ F L
Sbjct: 124 NPIYQTVRNLAGELPRETTLIGFAGAPWTVATYMIAGQGTKDQGPAHLLRTQDNALFEKL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ + EY+ AQI AG +V++IFD+ AG L FE YA I +++++P
Sbjct: 184 LDLITKATIEYMSAQIDAGAEVMKIFDSWAGSLPGDAFEKYALAPAREITQELKKRHPGI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A + +Q +G VQGNL +V G Q
Sbjct: 244 PIIGFPREAGDKYIGFAKATGVDCVALDNSVSADWAAKHVQVDGCVQGNLASTHMVTGGQ 303
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 304 ALVDETRQIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVRE 347
>gi|83855077|ref|ZP_00948607.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. NAS-14.1]
gi|83842920|gb|EAP82087.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. NAS-14.1]
Length = 349
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 208/344 (60%), Gaps = 3/344 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQ
Sbjct: 5 DTQSKTILRSLAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELATEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYL 120
PIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + L P D+ L
Sbjct: 65 PIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDQLRPVGDIH-ETL 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI+Q++ L +LP TLIGF GAPWTVA+YMI+G KD G + Q++ F L
Sbjct: 124 NPIYQTVRNLAGELPRETTLIGFAGAPWTVATYMIAGQGTKDQGPAHLLRTQDNALFEKL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ + EY+ AQI AG +V++IFD+ AG L FE YA I +++++P
Sbjct: 184 LDLITKATIEYMSAQIDAGAEVMKIFDSWAGSLPGDAFEKYALTPAREITQELKKRHPGI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A + +Q +G VQGNL +V G Q
Sbjct: 244 PIIGFPREAGDKYIGFAKATGVDCVALDNSVSADWAAKHVQVDGCVQGNLASTHMVTGGQ 303
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 304 ALVDETRQIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVRE 347
>gi|254295490|ref|YP_003061513.1| uroporphyrinogen decarboxylase [Hirschia baltica ATCC 49814]
gi|254044021|gb|ACT60816.1| uroporphyrinogen decarboxylase [Hirschia baltica ATCC 49814]
Length = 344
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 209/345 (60%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + ++K+LE L G + PP+W+MRQAGR+LPEY ++R + K+FLD CY+P E TL
Sbjct: 1 MAQPEKKLLETLNGKIYEHPPVWMMRQAGRHLPEYLELRGRAKDFLDFCYSPSLATEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRYN D AILF+DIL+I DA+GRNVRFV+ EGP++DP ++ P ++ L+ +
Sbjct: 61 QPIRRYNMDGAILFADILLILDAMGRNVRFVKGEGPQLDPASSAADLDKFP-LEKLLDRM 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++S ++ +L TLIGF GAPWTVA Y I G D R+ AYQ+ + +
Sbjct: 120 SPVYETVSRVKSQLAPETTLIGFAGAPWTVAVYAIEGKGGTDKSAARLKAYQDPEDLDAI 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L + +A YL AQ AG D + +FD+ A L E + + ++I VR
Sbjct: 180 LDILVETTAHYLKAQADAGADALMVFDSWAEGLAEDSMDRLVIKPTQKLIQRVRDLGVTQ 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F +G+G ML+ Y + T +GLD ++P+ + E L K PVQGNLDP+RL+ G
Sbjct: 240 PIIGFPRGSGAMLEPYAKHTGVTGVGLDTALPVKWVHEALPKSMPVQGNLDPLRLISGGD 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
M + I P IFNLGHG+TPQ NV VK +R E
Sbjct: 300 AMDARIREIKSAFKDRPHIFNLGHGVTPQTPISNVERAVKVIREE 344
>gi|56698468|ref|YP_168843.1| uroporphyrinogen decarboxylase [Ruegeria pomeroyi DSS-3]
gi|81676060|sp|Q5LMB5|DCUP_SILPO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56680205|gb|AAV96871.1| uroporphyrinogen decarboxylase [Ruegeria pomeroyi DSS-3]
Length = 344
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 205/343 (59%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E K K+L VL G V++ PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAETK-KLLRVLAGEVLDTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ F EGPR+ I Q + +D L
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFETGEGPRLSTIGAQADFDRLKPVDAIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP+ LIGF GAPWTVA+YMI+G D G N F+ L
Sbjct: 120 SPIYETVRILTRELPSETALIGFAGAPWTVATYMIAGRGTPDQGPAHALREGNPALFDAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ + EYL AQI AG +V++IFD+ AG L F YA I A++ ++P
Sbjct: 180 IARLTAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFTKYALEPCREITQALKARHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV P A +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGQGYVGFAKATGVDCVALDNSVTPDWAAAHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++D I++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 300 ALVDETRRIVEAFSKGPHIFNLGHGITPDADPENVQLMIDTVR 342
>gi|84685205|ref|ZP_01013104.1| uroporphyrinogen decarboxylase [Maritimibacter alkaliphilus
HTCC2654]
gi|84666937|gb|EAQ13408.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2654]
Length = 342
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 206/337 (61%), Gaps = 1/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ L G + PPIW+MRQAGRYLPEYR R+K +FL +CY PE E+TLQPIRR+
Sbjct: 5 LMRALAGETLPTPPIWMMRQAGRYLPEYRATREKAGDFLSLCYNPELAAEVTLQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FDAAILF+DIL++ ALG ++ FV EGPR+ I +E + D + L P+++++
Sbjct: 65 FDAAILFADILLVPQALGADLWFVTGEGPRLSTIEGEEDFAKLGGKDDIHDTLGPVYETV 124
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
IL ++LP LIGF GAPWTVA+YM++G D G N F L+D ++D
Sbjct: 125 RILSRELPAETALIGFAGAPWTVATYMVAGRGTSDQGPAHALKDTNRDLFTRLIDKITDA 184
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ EYL Q+ AG + ++IFD+ AG L +F+++A RII+ ++ ++P I+F +
Sbjct: 185 TIEYLSKQVEAGAETVKIFDSWAGSLKGRDFDDFALEPTKRIIAELKARHPGLPIIAFPR 244
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
AG + + T ++ + +D SV + A +Q +G VQGNL +V G Q ++D
Sbjct: 245 EAGERYIGFHKATGADCVAVDNSVSADWVAKHVQPDGCVQGNLASSHMVTGGQALVDEAQ 304
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI L GP IFNLGHGITP DP NV +++ VR+
Sbjct: 305 AITRALRGGPHIFNLGHGITPDADPDNVARMIEAVRT 341
>gi|75675170|ref|YP_317591.1| uroporphyrinogen decarboxylase [Nitrobacter winogradskyi Nb-255]
gi|74420040|gb|ABA04239.1| uroporphyrinogen decarboxylase [Nitrobacter winogradskyi Nb-255]
Length = 325
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/325 (45%), Positives = 207/325 (63%), Gaps = 4/325 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQPIRR+ FDAAI+FSDILVI A
Sbjct: 1 MMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPIRRFGFDAAIIFSDILVIPYA 60
Query: 84 LGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
LGR+VRF EGPR+DP+ T +I L+ D+ L P+F+++ ++ +L LIG
Sbjct: 61 LGRSVRFEAGEGPRLDPLDTPDKIAALSSEADM--TKLEPVFEALRRVKSELDPKTALIG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
FCGAPWTVA+YM++G D R+ AY++ AF ++D + D S YL+ Q+ AG D
Sbjct: 119 FCGAPWTVATYMVAGQGTPDQAPARMMAYRHPDAFAKVIDAIVDNSIRYLLGQLKAGADA 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFDT AG L EF ++ RI++ VRR+ P+AK I F +GAG +L +Y T
Sbjct: 179 LQIFDTWAGVLPPREFAQWSIEPTKRIVAGVRRQVPDAKIIGFPRGAGALLPSYIEATGV 238
Query: 263 NAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+A+ +DW+ P ++Q VQGNLDP+ L+ G + V+ +L G IFNL
Sbjct: 239 DAVSIDWAAEPFLIRDKVQNRVAVQGNLDPLALIAGGAALNRAVDDVLTNFAGGRLIFNL 298
Query: 322 GHGITPQVDPKNVLDLVKTVRSEKI 346
GHGI P+ +V +++ VR I
Sbjct: 299 GHGIQPETPIPHVEQMIRRVRGNGI 323
>gi|84516582|ref|ZP_01003941.1| uroporphyrinogen decarboxylase [Loktanella vestfoldensis SKA53]
gi|84509618|gb|EAQ06076.1| uroporphyrinogen decarboxylase [Loktanella vestfoldensis SKA53]
Length = 376
Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 211/342 (61%), Gaps = 3/342 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+K+ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY PE E+TLQPI
Sbjct: 35 QKKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREQAGDFLKLCYNPELAAEVTLQPI 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLP 122
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT +E+ L P D+ L P
Sbjct: 95 RRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTPEELGRLKPVEDIH-ETLNP 153
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++++ IL ++LP TLIGF GAPWTVA+YMI+G D G N F ++
Sbjct: 154 VYETVKILSQELPKETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKAANRPLFEGIMH 213
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ + YL QI AG + +++FD+ AG L +F ++ + + RI +A++ K+P
Sbjct: 214 RLTEGTIAYLSKQIEAGAECVKLFDSWAGSLQGDDFTEFSIKPMQRITAALKEKHPGIPV 273
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
I+F +GAG T ++ + +D V ++ A +QK+G VQGNL +V G Q +
Sbjct: 274 IAFPRGAGTKYAGVHAATGADCVAVDDGVDAAWVADHVQKDGCVQGNLASSHMVTGGQGL 333
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+D I D L G IFNLGHGITP+ DP NV ++ TVR
Sbjct: 334 VDETRRICDALSGGAHIFNLGHGITPEADPANVQLMIDTVRG 375
>gi|163737210|ref|ZP_02144628.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis BS107]
gi|161389814|gb|EDQ14165.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis BS107]
Length = 344
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 210/345 (60%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K K+L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQK-KLLRALAGETQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNPELATEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + L P D+
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTEADFAKLGPVSDIH-ET 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ +L LP+ TLIGF GAPWTVA+YMI+G D G + +N+ F
Sbjct: 119 LNPIYETVRLLSSALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHLLRQENNPLFEA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +++ + EYL QI AG +V++IFD+ AG L FE YA +I A++ ++P
Sbjct: 179 LLARITEATIEYLSMQIKAGAEVVKIFDSWAGSLRGEAFEKYALEPCRQITEALKERHPG 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV P A +Q +G VQGNL +V G
Sbjct: 239 IPVIGFPREAGDKYVGFAKATGVDCVALDNSVDPEWAAAHVQVDGCVQGNLASRHMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q ++D I+ G+GP IFNLGHGITP DP NV ++ VR
Sbjct: 299 QELVDDTRRIVKAFGNGPHIFNLGHGITPDADPDNVQRMIDAVRG 343
>gi|110678609|ref|YP_681616.1| uroporphyrinogen decarboxylase [Roseobacter denitrificans OCh 114]
gi|122972962|sp|Q16AR3|DCUP_ROSDO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109454725|gb|ABG30930.1| uroporphyrinogen decarboxylase [Roseobacter denitrificans OCh 114]
Length = 344
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 207/343 (60%), Gaps = 7/343 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 5 KTILRSLAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNP--NIDLFLNYLLP 122
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITTQ + L P ID LN P
Sbjct: 65 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTQADFDKLKPVDEIDAVLN---P 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++++ ILR++LP TLIGF GAPWTVA+YMI+G D +N F LL
Sbjct: 122 IYETVRILRRELPQETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALKDENRELFEALLA 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EYL QI AG +V++IFD+ AG L +F+ YA I +A++ ++P+
Sbjct: 182 RITQGTIEYLSRQIEAGAEVVKIFDSWAGSLKGADFQRYALEPAREITAAIKARHPDIPV 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q +
Sbjct: 242 IGFPREAGDGYIGFAKATGVDCVALDNSVSAEWAAANVQVDGCVQGNLASSHMVTGGQAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
ID AI+ GP IFNLGHGITP DP NV ++ VR +
Sbjct: 302 IDETRAIVKAFSGGPHIFNLGHGITPDADPDNVQRMIDAVRGQ 344
>gi|126733456|ref|ZP_01749203.1| uroporphyrinogen decarboxylase [Roseobacter sp. CCS2]
gi|126716322|gb|EBA13186.1| uroporphyrinogen decarboxylase [Roseobacter sp. CCS2]
Length = 344
Score = 299 bits (765), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 213/343 (62%), Gaps = 3/343 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPI
Sbjct: 3 QQKTILRALAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLP 122
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT+ E+ L P + + L P
Sbjct: 63 RRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITSADELAKLKPT-EAIHDTLNP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F+ +++
Sbjct: 122 VYETVKILSRELPDETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKSENRPVFDGIIN 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ + YL QI AG + +++FD+ AG L +F NY+ + + RII+A++ K+P
Sbjct: 182 RLTEGTIAYLSKQIDAGAECVKLFDSWAGSLQGDDFTNYSIKPMQRIIAALKEKHPGVPV 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
I+F +GAG T ++ + +D V ++ A +Q +G VQGNL +V G +
Sbjct: 242 IAFPRGAGTKYVGVHAATGADCVAVDDGVDAAWVAQNVQNDGCVQGNLKSSHMVTGGDAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I D L GP IFNLGHGITP +P+NV ++ TVR
Sbjct: 302 VSETRRICDALSGGPHIFNLGHGITPDANPENVQLMIDTVRGS 344
>gi|260574198|ref|ZP_05842203.1| uroporphyrinogen decarboxylase [Rhodobacter sp. SW2]
gi|259023664|gb|EEW26955.1| uroporphyrinogen decarboxylase [Rhodobacter sp. SW2]
Length = 343
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 206/338 (60%), Gaps = 1/338 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGR+LPEYR R + +FL +CY E E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRFLPEYRATRAQAGDFLSLCYNSELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAI+F+DIL++ ALG ++ F EGPRM TT E D +L PI++
Sbjct: 63 YGFDAAIVFADILLLPQALGADLWFETGEGPRMSTTTTMEAVKALKPADAIHEHLAPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF G PWTVA+YMI+G KD + F LLD ++
Sbjct: 123 TVRILRRELPTETTLIGFAGNPWTVATYMIAGRGSKDQAAAHALKAADRATFAALLDRIA 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + EYL Q+ AG +VI++FD+ AG L +F ++A RIIS ++ ++P I+F
Sbjct: 183 DATIEYLSMQVDAGAEVIKLFDSWAGSLKGQDFTDFAVAPTKRIISELKARHPGLPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + + T ++ + LD SV +A E +Q +G VQGN+DP+ +V G + +
Sbjct: 243 PREAGNGYIGFAKATGADCVALDNSVTPEWAAENVQVDGCVQGNMDPIHMVTGGAALDEA 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ +GP IFNLGHGITP DP+NV +++ VR
Sbjct: 303 TRRVVKAFKNGPHIFNLGHGITPDADPENVTRMIEVVR 340
>gi|254474454|ref|ZP_05087840.1| uroporphyrinogen decarboxylase [Ruegeria sp. R11]
gi|214028697|gb|EEB69532.1| uroporphyrinogen decarboxylase [Ruegeria sp. R11]
Length = 344
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 212/345 (61%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K K+L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQK-KLLRALAGETQDVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ IT++ + L P D+
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITSEADFAKLGPVSDIH-ET 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F
Sbjct: 119 LNPIYETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALREENKALFEA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +++ + EYL QI AG +V++IFD+ AG L F YA +I +A++ +YP+
Sbjct: 179 LLARITEATIEYLSMQIDAGAEVVKIFDSWAGSLKGEAFAKYALEPCRQITAALKERYPH 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV P A +Q +G VQGNL +V G
Sbjct: 239 IPVIGFPREAGDKYVGFAKATGIDCVALDNSVDPEWAAANVQVDGCVQGNLASRHMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q +ID I+ +GP IFNLGHGITP DP NV ++ TVR+
Sbjct: 299 QDLIDETRRIVAAFKNGPHIFNLGHGITPDADPDNVQLMIDTVRN 343
>gi|126463095|ref|YP_001044209.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17029]
gi|166234278|sp|A3PM71|DCUP_RHOS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126104759|gb|ABN77437.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17029]
Length = 343
Score = 298 bits (763), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 208/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT E D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMEGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++P I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E + G VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|259417116|ref|ZP_05741035.1| uroporphyrinogen decarboxylase [Silicibacter sp. TrichCH4B]
gi|259346022|gb|EEW57836.1| uroporphyrinogen decarboxylase [Silicibacter sp. TrichCH4B]
Length = 347
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 207/342 (60%), Gaps = 3/342 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+K+ IL L G PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPI
Sbjct: 3 QKKTILRALAGETQAVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNYLLP 122
RRY FDAAILF+DIL++ ALG + FV EGPR+ ITT+ + L P D+ L P
Sbjct: 63 RRYGFDAAILFADILLVPQALGAELWFVTGEGPRLSTITTEADFAKLGPASDVH-ETLNP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++++ IL + LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL
Sbjct: 122 VYETVRILSRALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTALFEALLA 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++ + YL AQI AG +V++IFD+ AG L FE YA I +A++ ++P
Sbjct: 182 RITEATISYLSAQIEAGAEVVKIFDSWAGSLKGDAFEKYALEPAREITAALKARHPGVPI 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + + T + + LD SV P A+++Q +G VQGNL +V G + +
Sbjct: 242 IGFPREAGEKYVGFHKATGVDCVALDNSVEPDWAAVQVQVDGCVQGNLASRHMVTGGEEL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I+ GP IFNLGHGITP +P NV ++ TVR+
Sbjct: 302 VADTRRIVQAFSKGPHIFNLGHGITPDANPDNVQLMIDTVRA 343
>gi|99082368|ref|YP_614522.1| uroporphyrinogen decarboxylase [Ruegeria sp. TM1040]
gi|122984122|sp|Q1GDK6|DCUP_SILST RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|99038648|gb|ABF65260.1| uroporphyrinogen decarboxylase [Ruegeria sp. TM1040]
Length = 345
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 206/341 (60%), Gaps = 3/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ IL L G PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPI
Sbjct: 3 QQKTILRALAGETQAVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNYLLP 122
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT + L P D+ L P
Sbjct: 63 RRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTDADFAKLGPASDVH-ETLSP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++++ IL K+LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL
Sbjct: 122 IYETVRILSKELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTPLFEALLA 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++ + YL AQI AG +V++IFD+ AG L F+ YA +I +A++ ++P+
Sbjct: 182 RITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEAFDKYALEPARQITAALKARHPHVPV 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + T + + LD SV +A E +Q G VQGNL +V G + +
Sbjct: 242 IGFPREAGEKYIGFHAATGVDCVALDNSVDPEWAAEHVQVAGCVQGNLASRHMVSGGEAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 302 VQDTRRIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVR 342
>gi|84500375|ref|ZP_00998624.1| uroporphyrinogen decarboxylase [Oceanicola batsensis HTCC2597]
gi|84391328|gb|EAQ03660.1| uroporphyrinogen decarboxylase [Oceanicola batsensis HTCC2597]
Length = 343
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL+ L+G V PPIW+MRQAGRYLPEYR R+K +FL +CY P+ E+TLQPIRR
Sbjct: 4 KTILKALRGEVQKVPPIWMMRQAGRYLPEYRATREKAGDFLSLCYNPDLAAEVTLQPIRR 63
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
Y FD AILF+DIL++ ALG ++ FV EGPR+ +T+Q + L P D+ L PI+
Sbjct: 64 YGFDGAILFADILLLPQALGADLWFVTGEGPRLSTVTSQADFDALKPAADVH-EVLSPIY 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++SIL ++LP TLIGF GAPWTVA+YM++G D G +N F+ L+D L
Sbjct: 123 ETVSILSQELPPETTLIGFAGAPWTVATYMVAGRGTPDQGPAHALKAENRALFSALIDLL 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + YL QI AG +V+++FD+ AG L +F+++A RII+ ++ ++P I+
Sbjct: 183 TEGTIAYLSRQIDAGAEVVKLFDSWAGSLSGRDFDDFALAPAKRIIAELKARHPGIPVIA 242
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMID 303
F + AG + T ++ + +D SV + A +Q +G VQGNL +V G Q +++
Sbjct: 243 FPRQAGDRYVGFAGDTGADCVAVDDSVSAEWAATHVQVDGCVQGNLASRHMVTGGQELVE 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 303 ATRGIVRAFSGGPHIFNLGHGITPDADPDNVQLMIDTVRG 342
>gi|254486713|ref|ZP_05099918.1| uroporphyrinogen decarboxylase [Roseobacter sp. GAI101]
gi|214043582|gb|EEB84220.1| uroporphyrinogen decarboxylase [Roseobacter sp. GAI101]
Length = 349
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 201/338 (59%), Gaps = 1/338 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY P+ E+TLQPIRR
Sbjct: 9 KTILRALAGETLATPPIWMMRQAGRYLPEYKATRAEAGDFLSLCYNPDLATEVTLQPIRR 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + +D L PI+Q
Sbjct: 69 YGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDKLKPVDAIHETLNPIYQ 128
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ L LP TLIGF GAPWTVA+YMI+G KD G ++ F LL+ ++
Sbjct: 129 TVRNLGGALPPETTLIGFAGAPWTVATYMIAGQGTKDQGPAHQLRINDNPLFESLLNLIT 188
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EY+ AQI AG +V++IFD+ AG L F+ YA I +++++P I F
Sbjct: 189 KATIEYMSAQIDAGAEVMKIFDSWAGSLSGEAFQKYALEPAREITQELKKRHPGIPIIGF 248
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + R T + + LD SV + A +Q +G VQGNL +V G Q ++D
Sbjct: 249 PREAGDQYIGFHRATGVDCVALDNSVSAEWAAANVQVDGCVQGNLASRHMVTGGQDLVDE 308
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
AI+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 309 TRAIVKAFSKGPHIFNLGHGITPDADPDNVQLMIDTVR 346
>gi|221640137|ref|YP_002526399.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides KD131]
gi|332559142|ref|ZP_08413464.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides WS8N]
gi|254767704|sp|B9KLM3|DCUP_RHOSK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221160918|gb|ACM01898.1| Uroporphyrinogen decarboxylase [Rhodobacter sphaeroides KD131]
gi|332276854|gb|EGJ22169.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides WS8N]
Length = 343
Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 207/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++P I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E + G VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|294676722|ref|YP_003577337.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus SB 1003]
gi|1169255|sp|P42503|DCUP_RHOCA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|567081|gb|AAA97435.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus]
gi|294475542|gb|ADE84930.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus SB 1003]
Length = 344
Score = 295 bits (756), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 210/339 (61%), Gaps = 2/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L+G V+ PP+WLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 4 KTILRALKGEVLPTPPVWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 63
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM +T+ E D + L P+++
Sbjct: 64 YGFDAAILFADILLLPQALGLDLWFETGEGPRMSTVTSMEGVKGLKGKDDIHDKLAPVYE 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD F + AF+ L+D ++
Sbjct: 124 TCKILSRELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKFKDTDRAAFSALIDAVT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EYL Q+ AG +V+++FD+ AG L +FE++A I + ++R++P I+F
Sbjct: 184 VATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVEPARVITAEMKRRFPGLPVIAF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E ++G VQGNLDP +V G Q +++
Sbjct: 244 PREAGQGYIGFAEKTGADCVAIDNSVSPDWAAENVQKGKTCVQGNLDPSYMVTGGQELVE 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ +GP IFNLGHGITP+ +P NV L++T+R
Sbjct: 304 ATKKVVAAFKNGPHIFNLGHGITPEANPDNVTLLMETIR 342
>gi|218529747|ref|YP_002420563.1| uroporphyrinogen decarboxylase [Methylobacterium chloromethanicum
CM4]
gi|218522050|gb|ACK82635.1| uroporphyrinogen decarboxylase [Methylobacterium chloromethanicum
CM4]
Length = 360
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 216/351 (61%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + + + L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPTLLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE----FENYAARSVGRIISAVRRKYP 238
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R++ VR + P
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPESSDGDALKRYSLGPITRMVQGVRAQVP 251
Query: 239 NAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRL 294
+AK I FAKG+G L+ + R+ T ++A+G+DW V L + + QGNL P L
Sbjct: 252 DAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTVTQGNLHPETL 309
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G + + V+AIL P IFNLGHGITPQ +V ++ +R +
Sbjct: 310 IEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGGR 360
>gi|254464838|ref|ZP_05078249.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium Y4I]
gi|206685746|gb|EDZ46228.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium Y4I]
Length = 344
Score = 295 bits (754), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 211/341 (61%), Gaps = 3/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++K+L L G + PPIW+MRQAGRYLPEYR R + +FL +CY + E+TLQPIR
Sbjct: 4 QKKLLRALAGEKQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLAAEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNYLLPI 123
RY FDAAILF+DIL+I ALG ++ FV EGPR+ ITT + L P D+ L PI
Sbjct: 64 RYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITTDADFAKLGPASDIH-ETLNPI 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL
Sbjct: 123 YETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHRLREENTALFEALLAR 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + +YL QI AG +V++IFD+ AG L +FE YA +I +A+++++P I
Sbjct: 183 ITEATIDYLSKQIEAGAEVVKIFDSWAGSLKGADFEKYALEPCRQITAALKQRHPGIPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F + AG + + T + + LD SV P A +Q +G VQGNL +V G Q ++
Sbjct: 243 GFPREAGEKYVGFAKATGVDCVALDNSVDPEWAAANVQVDGCVQGNLASRHMVTGGQDLV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D I++ +GP IFNLGHGITP DP NV ++ TVR
Sbjct: 303 DETRRIVEAFQNGPHIFNLGHGITPDADPDNVQLMIDTVRG 343
>gi|126740631|ref|ZP_01756318.1| uroporphyrinogen decarboxylase [Roseobacter sp. SK209-2-6]
gi|126718432|gb|EBA15147.1| uroporphyrinogen decarboxylase [Roseobacter sp. SK209-2-6]
Length = 344
Score = 293 bits (749), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 210/345 (60%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K KIL L G + PPIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MAEQK-KILRALAGEKQSVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNY 119
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ IT++ + L P D+
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITSEADFAKLGPASDIH-ET 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F
Sbjct: 119 LNPIYETVKILSRELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKQENRPLFEA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +++ + +YL QI AG +V++IFD+ AG L +F YA +I +A++ ++P
Sbjct: 179 LLARITEATIDYLSKQIEAGAEVVKIFDSWAGSLKGEDFRKYALEPCRQITAALKERHPG 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I F + AG + + T + + LD SV PL A LQ +G VQGNL +V G
Sbjct: 239 IPVIGFPREAGDAYLGFAKETGIDCLALDNSVDPLWAAQNLQVDGCVQGNLASRHMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ AI+ +GP IFNLGHGITP +P NV ++ TVR
Sbjct: 299 EELVKETRAIVQAFQNGPHIFNLGHGITPDANPDNVKLMIDTVRE 343
>gi|77464253|ref|YP_353757.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides 2.4.1]
gi|85700415|sp|P32920|DCUP_RHOS4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77388671|gb|ABA79856.1| Uroporphyrinogen decarboxylase [Rhodobacter sphaeroides 2.4.1]
Length = 343
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 206/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++ I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFQGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E + G VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|114571512|ref|YP_758192.1| uroporphyrinogen decarboxylase [Maricaulis maris MCS10]
gi|122314948|sp|Q0AKD9|DCUP_MARMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114341974|gb|ABI67254.1| uroporphyrinogen decarboxylase [Maricaulis maris MCS10]
Length = 345
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 215/344 (62%), Gaps = 4/344 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K+ IL+VL G ++PPP+WLMRQAGRYL EYRQ+R + KNF+D C++P+ E+T
Sbjct: 1 MNDLTKKPILQVLAGETVSPPPVWLMRQAGRYLAEYRQVRSRAKNFIDFCFSPDLAAEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPIRR+ FDAAILF+DIL++ ALGR V FV EGP+++P ++ L +D
Sbjct: 61 LQPIRRFGFDAAILFADILLVPIALGRKVWFVTGEGPQLEPFDPRQFEEL--RLDQTEAV 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L I +++ + +LP+ T+IGF G+PWTVA+YM+ GG KD + RV A++ AF+
Sbjct: 119 LGSIGETLKRVVPELPDTTTMIGFAGSPWTVATYMVEGGGSKDRFRTRVAAWEYPEAFDG 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD ++DV+AEYLI Q +G +V+++FD+ A L E FE R RI+ AVR +
Sbjct: 179 MLDRIADVTAEYLIMQARSGAEVLKLFDSWAEGLPEPLFERVVIRPTKRIVDAVRAAGID 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F +GAG + Y R T AI +D V ++ + G PVQG+LDP L G
Sbjct: 239 VPIIGFPRGAGTLYPRYARETGVTAIAVDTGVDPAWIQSVLPAGMPVQGHLDPSVLRAGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ +LD P IFNLGHGITP V +V L+ +R
Sbjct: 299 AALDGEVDRLLDQWAGRPHIFNLGHGITPDVPVAHVEQLLARIR 342
>gi|114765838|ref|ZP_01444931.1| uroporphyrinogen decarboxylase [Pelagibaca bermudensis HTCC2601]
gi|114541837|gb|EAU44874.1| uroporphyrinogen decarboxylase [Roseovarius sp. HTCC2601]
Length = 343
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 203/339 (59%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FD AILF+DIL++ ALG ++ FV EGPR+ ITTQ + ++ + L PI++
Sbjct: 63 YGFDGAILFADILLVPQALGNDLWFVTGEGPRLSTITTQAEFDKLGRGEMIHDTLSPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF GAPWTVA+YMI+G KD G +N F +++ L+
Sbjct: 123 TVKILRRELPEETTLIGFAGAPWTVATYMIAGRGTKDQGPAHALKAENRPLFEAIIERLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL AQ+ AG +V+++FD+ AG L +F YA I ++ ++P I F
Sbjct: 183 EATIDYLSAQVEAGAEVVKLFDSWAGSLSGEDFRRYALEPARIITQELKARHPGLPVIVF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL +V G ++
Sbjct: 243 PRQAGQGYVGFHEATGADCVAVDDSVSPEWAAEHVQVSGCVQGNLASSHMVTGGDALVTE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 303 TLRVVKAFSKGPHIFNLGHGITPDADPENVQLMIDTVRE 341
>gi|146276602|ref|YP_001166761.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17025]
gi|166234279|sp|A4WPZ2|DCUP_RHOS5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145554843|gb|ABP69456.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17025]
Length = 343
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 206/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTMLRALRGETLPTPPIWLMRQAGRYLPEYRATRAEAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVEALKGKDEIHEKLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRIT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A +II+ ++ ++P I+F
Sbjct: 183 EATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKKIIAELKARHPGLPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E ++G VQGNLDP ++ G ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAENVQKGKSCVQGNLDPKYMITGGDELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV L++T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLIETIRGK 343
>gi|170739349|ref|YP_001768004.1| uroporphyrinogen decarboxylase [Methylobacterium sp. 4-46]
gi|168193623|gb|ACA15570.1| uroporphyrinogen decarboxylase [Methylobacterium sp. 4-46]
Length = 357
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 216/355 (60%), Gaps = 16/355 (4%)
Query: 2 NERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ER+ + +L VL G ++PPP W+MRQAGRYLPEYR++R K +FLD+CYTP++ E+TL
Sbjct: 4 SEREARPVLRVLSGESLSPPPAWMMRQAGRYLPEYRELRAKAGSFLDLCYTPDFATEVTL 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLN 118
QPIRR+ F+AAILFSDILV+ ALG+ VRFVE EGPR+D + + L ++
Sbjct: 64 QPIRRFGFEAAILFSDILVVPHALGQGVRFVEGEGPRLDALEDPAAFGTLRGAGDARVMD 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+L P+F+++S LR LP TL+GFCGAPWTVASYMI G D R A ++ +
Sbjct: 124 HLAPVFETVSRLRAALPRETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAARDPALLD 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL-GEHEFE------NYAARSVGRIIS 231
L++ L VS EYL QI AG D +QIF++H G L G E E ++ + RI++
Sbjct: 184 GLIERLVAVSTEYLARQIEAGADAVQIFESHGGTLPGMPEGEAGDALTRWSLGPIARIVA 243
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGPVQG 287
+R + P A+ I F +G G L + R T ++A+G+DW V L + L QG
Sbjct: 244 GLRARVPGARVIVFPRGTG--LDGHARTLAATGADAVGVDWDVDLAALRGRLPGRAVTQG 301
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
NL P L+ G + V+AIL P IFNLGHGITP+ +V ++ +R
Sbjct: 302 NLHPHTLIAGGAALDAAVDAILAATAGLPHIFNLGHGITPETPIAHVERMLARLR 356
>gi|310815396|ref|YP_003963360.1| uroporphyrinogen decarboxylase [Ketogulonicigenium vulgare Y25]
gi|308754131|gb|ADO42060.1| uroporphyrinogen decarboxylase [Ketogulonicigenium vulgare Y25]
Length = 344
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 207/341 (60%), Gaps = 3/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L G + PP W+MRQAGRYLPEYR R + +FL +CYTP+ E+TLQP+R
Sbjct: 4 QKPILRALAGETLPTPPAWMMRQAGRYLPEYRATRAEAGDFLSLCYTPDLAAEVTLQPLR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPI 123
RY+FDAAILF+DIL++ ALG + F EGPR+ TT E+ L P D + L PI
Sbjct: 64 RYSFDAAILFADILLLPQALGAELWFTPGEGPRLSTTTTPDELSALKP-ADAVHDRLSPI 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP + LIGF GAPWTVA+YMI+G D G ++ F+ ++D
Sbjct: 123 YETVRILARELPKDVALIGFAGAPWTVATYMIAGRGTPDQGPAHALKTEDRATFDGIIDL 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ + EYL Q+ AG +VI++FD+ AG L +F Y+ R + I SA++ ++P I
Sbjct: 183 LTAGTIEYLSKQVEAGAEVIKLFDSWAGSLQGEDFARYSLRPMQEITSALKARFPGLPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GAG ++ I +D V ++A E +Q G VQGNL LV G ++
Sbjct: 243 AFPRGAGNRYAGSHAAVGADCIAIDDGVTAAWAAEHVQPAGCVQGNLLNSHLVTGGDALV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ L GP IFNLGHGITP DP+NV +++ +++
Sbjct: 303 TETQRVVRALRGGPHIFNLGHGITPDADPENVTIMLEAIKN 343
>gi|149915547|ref|ZP_01904073.1| cobaltochelatase [Roseobacter sp. AzwK-3b]
gi|149810439|gb|EDM70282.1| cobaltochelatase [Roseobacter sp. AzwK-3b]
Length = 344
Score = 289 bits (740), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/340 (43%), Positives = 206/340 (60%), Gaps = 3/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL+ L G PPIW+MRQAGRYLPEYR R + +FL +CY + E+TLQPIR
Sbjct: 4 EKTILKALAGEKQTTPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLATEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPI 123
RY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + L P D+ L PI
Sbjct: 64 RYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITDQSGLNALKPASDIH-ETLNPI 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+Q++ L + LP TLIGF GAPWTVA+YMI+G D G +N F LL+
Sbjct: 123 YQTVRNLSQALPPETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKAVFEALLER 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + EYL AQI AG + +++FD+ AG L +F+ YA RII+ ++ ++ + I
Sbjct: 183 ITEATIEYLSAQIEAGAECVKLFDSWAGSLKGEDFDTYATAPATRIIAELKARHGDIPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F + AG + T ++ + LD SV +A E +Q G VQGNL +V G + ++
Sbjct: 243 AFPREAGDKYIGFHAKTGADCVALDDSVTPEWAAEHVQVSGCVQGNLASKHMVTGGEDLV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I++ GP IFNLGHGITP+ DP NV ++ TVR
Sbjct: 303 RETRRIVEAFRGGPHIFNLGHGITPEADPDNVQLMIDTVR 342
>gi|312115406|ref|YP_004013002.1| uroporphyrinogen decarboxylase [Rhodomicrobium vannielii ATCC
17100]
gi|311220535|gb|ADP71903.1| uroporphyrinogen decarboxylase [Rhodomicrobium vannielii ATCC
17100]
Length = 348
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 204/336 (60%), Gaps = 1/336 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K L L+G PP+WLMRQAGRYL EYR++R + +FL++CY PE E+TLQPIRR+
Sbjct: 13 KFLAALKGTAHKAPPMWLMRQAGRYLAEYREVRSQAGSFLNLCYNPELAAEVTLQPIRRF 72
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
+FDAAI+FSDILV+ ALG+++ F E EGP +DPIT+ L +++ + ++++
Sbjct: 73 DFDAAIIFSDILVVPHALGQHLEFREGEGPHLDPITSLA-DLSKLSVEKAKSTFSIVYEA 131
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I L + LIGFCGAPWTVASYM+ G D+ ++ AY+ F +LD L +
Sbjct: 132 IDRTISGLGDRTPLIGFCGAPWTVASYMVEGHGSSDYRAAKLLAYREPETFKAILDMLVE 191
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
SA YLI Q +AG +QIFD+ A L +++F+ + I+ V+ +PN I F
Sbjct: 192 ASAMYLIGQANAGARALQIFDSWASALADNDFDAFVIEPTAEIVKRVKAVHPNVPIIGFP 251
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GA +Y T +A+G D + PL Q + VQGNLDP+ L+ G M VN
Sbjct: 252 RGASPKYADYVARTGVDALGCDTAAPLPTIAAQQDKVTVQGNLDPLLLLAGGDAMDRRVN 311
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
AIL+ L P++FNLGHGI P ++V L++TVR
Sbjct: 312 AILEALAPKPYVFNLGHGILPDTPIEHVERLIRTVR 347
>gi|260426787|ref|ZP_05780766.1| uroporphyrinogen decarboxylase [Citreicella sp. SE45]
gi|260421279|gb|EEX14530.1| uroporphyrinogen decarboxylase [Citreicella sp. SE45]
Length = 347
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 204/338 (60%), Gaps = 1/338 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + ++ + L PI++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTEAGFDKLGRGEMIHDTLNPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR +LP+ TLIGF GAPWTVA+YMI+G D G +N F +++ L+
Sbjct: 123 TVKILRSELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHTLKAENRALFEKIIERLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL AQ+ AG +V+++FD+ AG L +F+ YA I ++ ++P I F
Sbjct: 183 ESTIDYLSAQVEAGAEVVKLFDSWAGSLDGEDFQRYALEPARIITRELKARHPGLPVIVF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL +V G ++
Sbjct: 243 PRQAGEGYVGFHEATGADCVAVDDSVTPEWAAEHVQVSGCVQGNLASSHMVTGGDALVAE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 303 TRRVVRAFSKGPHIFNLGHGITPDADPENVQLMIDTVR 340
>gi|126732358|ref|ZP_01748158.1| uroporphyrinogen decarboxylase [Sagittula stellata E-37]
gi|126707227|gb|EBA06293.1| uroporphyrinogen decarboxylase [Sagittula stellata E-37]
Length = 345
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/342 (41%), Positives = 206/342 (60%), Gaps = 4/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L G + PPIW+MRQAGRYLPEY+ R + +FL +CY P+ E+TLQPIRR
Sbjct: 3 KTLLRALAGETLPTPPIWMMRQAGRYLPEYKATRAEAGDFLSLCYNPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ IT+ + ++ + L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITSDADFDKLGRGEMIHDTLSPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILRK LP +TLIGF GAPWTVA+YMI+G D G +N F ++D L+
Sbjct: 123 TVKILRKTLPEEVTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENRALFEKIIDRLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL Q+ AG +V++IFD+ AG L +F+ YA I ++ ++P I+F
Sbjct: 183 EGTIDYLTEQVKAGAEVVKIFDSWAGSLKGDDFDRYALEPARIITQELKSRFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL LV G +++
Sbjct: 243 PRQAGDKYIGFHAATGADCVAIDDSVTPEWAAEHVQPGGCVQGNLANTHLVTGGDALVEE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNV---LDLVKTVRS 343
++ GP IFNLGHGITP DP+NV +D V+ VRS
Sbjct: 303 TQRVVRAFSKGPHIFNLGHGITPDADPENVQIMIDAVRAVRS 344
>gi|254450824|ref|ZP_05064261.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 238]
gi|198265230|gb|EDY89500.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 238]
Length = 322
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 205/323 (63%), Gaps = 3/323 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRRY FDA+ILF+DIL++ AL
Sbjct: 1 MRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRRYGFDASILFADILLLPQAL 60
Query: 85 GRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G ++ FV EGPR+ +TT E+ L P + + L PI+++I +L +LP+ +TLIGF
Sbjct: 61 GADLWFVTGEGPRLSTVTTADELKALKP-VSAIHDTLSPIYETIKLLTGELPDDVTLIGF 119
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWTVA+YMI+G D G + F LLD ++D + EYL AQI+AG +V+
Sbjct: 120 AGAPWTVATYMIAGQGSPDQGPAHALKDTDKAVFEGLLDLITDGTIEYLSAQINAGAEVV 179
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
++FD+ AG L +F NYA + + RI++A+++++P+ I+F +GA ++
Sbjct: 180 KLFDSWAGSLMGDDFTNYAIKPMARIVAALKQRHPDTPIIAFPRGADERYIGLHDAIGAD 239
Query: 264 AIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
I LD V +A + +Q +G VQGNL +V G ++ I+DVL GP IFNLG
Sbjct: 240 CIALDDGVMAQWAADNVQIDGCVQGNLKSSHMVTGGDTLVSETRRIVDVLKGGPHIFNLG 299
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HGITP DP+NV ++ TVR +
Sbjct: 300 HGITPDADPQNVQLMIDTVREAR 322
>gi|114770078|ref|ZP_01447616.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
gi|114548915|gb|EAU51798.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
Length = 345
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 207/347 (59%), Gaps = 6/347 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + I+ L G ++ PP+W+MRQAGRYLPEY+ R +FL +CY PE E+TL
Sbjct: 1 METKNKLIIRALNGEKLSTPPVWMMRQAGRYLPEYKATRSLAGDFLSLCYNPELATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIR+Y FDAAILF+DIL+I ALG + FV EGPR+ IT Q + L +I+ L
Sbjct: 61 QPIRKYGFDAAILFADILLIPQALGAKLWFVTGEGPRLSTITDQNDFDLLGDIENIDQVL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ L LP+ TLIGF GAPWTVA+YMI+G + N F+ L
Sbjct: 121 SPIYETVRKLSSVLPDETTLIGFAGAPWTVATYMIAGRGTPNQKPALDLIKTNPEVFDLL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ ++ + YL QI AG +V++IFD+ AG L FE Y I +R+ +PN
Sbjct: 181 INKITHATVHYLSKQIDAGAEVVKIFDSWAGSLKGELFERYCIEPSKIISDELRKIHPNI 240
Query: 241 KFISFAKGA---GYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
K I F +GA GY+ NY + T + + +D SV +A ELQK VQGNLD LV
Sbjct: 241 KIIGFPRGATNNGYL--NYAQSTAVDCVAIDSSVDTQWAANELQKVTCVQGNLDQKLLVS 298
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G Q +I+ I+ L +GP IFNLGHGITP DP NV +++ +R+
Sbjct: 299 GGQTLINETKRIVKALSNGPHIFNLGHGITPDADPSNVTKMIEAIRN 345
>gi|89069762|ref|ZP_01157098.1| uroporphyrinogen decarboxylase [Oceanicola granulosus HTCC2516]
gi|89044708|gb|EAR50819.1| uroporphyrinogen decarboxylase [Oceanicola granulosus HTCC2516]
Length = 342
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 199/337 (59%), Gaps = 1/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G + PPIWLMRQAGRYLPEYR R + +FL +CY PE E+TLQPIRR+
Sbjct: 6 LLRALAGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIRRFG 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FDAAILF+DIL++ ALG ++ FV EGPR+ +T + D + L P+++++
Sbjct: 66 FDAAILFADILLVPQALGLDLWFVTGEGPRLSTVTGPDDLARLRGPDDIHDRLAPVYETV 125
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L + LP + LIGF GAPWTVA+YMI+G D G + F+ L++ ++
Sbjct: 126 RRLTESLPREVALIGFAGAPWTVATYMIAGRGTPDQGPAHALKSTDRATFDALMERITLA 185
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ EYL AQ+ AG + +++FD+ AG L +FE YA RI++A++ ++P I+F +
Sbjct: 186 TIEYLSAQVEAGAECVKLFDSWAGSLEGDDFETYAVAPAARIVAALKARHPGLPVIAFPR 245
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GA + + +D V +A E +Q G VQGNL P +V G +++
Sbjct: 246 GADSRYVGLHERIGAECMAIDNGVSARWAAEHVQPGGCVQGNLAPTHMVTGGAALVEETR 305
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI++ GP +FNLGHGITP DP NV L++ VR
Sbjct: 306 AIVEAFSRGPHVFNLGHGITPDADPDNVHRLIEAVRG 342
>gi|240138052|ref|YP_002962524.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens AM1]
gi|240008021|gb|ACS39247.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens AM1]
Length = 360
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 216/351 (61%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + + + L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE----FENYAARSVGRIISAVRRKYP 238
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R++ VR + P
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPESSDGDALKRYSLGPITRMVQGVRAQVP 251
Query: 239 NAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRL 294
+AK I FAKG+G L+ + R+ T ++A+G+DW V L + + QGNL P L
Sbjct: 252 DAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTVTQGNLHPETL 309
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G + + V+AIL P IFNLGHGITPQ +V ++ +R +
Sbjct: 310 IEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGSR 360
>gi|298293761|ref|YP_003695700.1| uroporphyrinogen decarboxylase [Starkeya novella DSM 506]
gi|296930272|gb|ADH91081.1| uroporphyrinogen decarboxylase [Starkeya novella DSM 506]
Length = 350
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 207/339 (61%), Gaps = 5/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L G+V PIW+MRQAGRYLPEYR++R+K +FL +CYTPE+ VE+TLQPIRR+
Sbjct: 13 LLQALDGHVPKRTPIWMMRQAGRYLPEYREVREKAGDFLTLCYTPEHAVEVTLQPIRRFG 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-TQEIYLLNPNIDLFLNYLLPIFQS 126
FDAAILFSDILV+ ALG + F EGPR+ P+T ++ L ++D + + + ++
Sbjct: 73 FDAAILFSDILVVPHALGCPLTFEAGEGPRLQPVTDADDLKALRDDLD--PSKIDRVLET 130
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S +R +LP L+GFCGAPWTVA+YM++G D R+ A N F L+D L +
Sbjct: 131 VSRVRAELPGETALLGFCGAPWTVATYMVAGRGTPDQAPARLAALINPDFFEALIDRLVE 190
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
S YL+ Q+ AG D +QIFDT +G L F ++ + + RI+ VR + P A+ I+F
Sbjct: 191 ASVGYLVGQLRAGADAVQIFDTWSGVLDPESFRRWSIQPIKRIVDGVRAQVPGARIIAFP 250
Query: 247 KGAGYM-LKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
KGA L T N +GLDW+ + L L +QGNLDP+ L+ G + G
Sbjct: 251 KGATLAGLTELVLRTGVNGVGLDWTAERRATRLALGGRCALQGNLDPLALIAGGDALDRG 310
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++A+++ IFNLGHGI P+ +V +V VR
Sbjct: 311 IDALMEDFHGAAHIFNLGHGIRPETPITHVERMVAKVRG 349
>gi|188580750|ref|YP_001924195.1| uroporphyrinogen decarboxylase [Methylobacterium populi BJ001]
gi|179344248|gb|ACB79660.1| uroporphyrinogen decarboxylase [Methylobacterium populi BJ001]
Length = 361
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 216/361 (59%), Gaps = 21/361 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M E K + +L V+ G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E
Sbjct: 6 MAEAKTADRPVLRVMSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATE 65
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDL 115
+TLQPIRR+ F+A+ILFSDILV+ ALG++VRFVE EGPR+D + + + L
Sbjct: 66 VTLQPIRRFGFEASILFSDILVVPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPA 125
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++L P+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A +
Sbjct: 126 IFSHLAPVFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAASDPA 185
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH----EFENYAARSVGRIIS 231
+ LLD L V EYL+ Q+ AG D +QIF++HAG L + + ++ + R++
Sbjct: 186 LLDALLDRLVTVQIEYLVRQLRAGADAVQIFESHAGVLPDSADGDALKRFSLGPIARMVG 245
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPLSFALELQKEGP---- 284
+R + P AK I FA+G+G L + R+ T ++ +G+DW V L+ L+ P
Sbjct: 246 GIRAEVPGAKIIVFARGSG--LDGHARVIPETGADVVGVDWGVDLA---ALRGRVPATTV 300
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
QGNL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R
Sbjct: 301 TQGNLHPETLIEGGRALDAAVDAILAATEGQPHIFNLGHGITPQTPIAHVEQMLARLRGG 360
Query: 345 K 345
+
Sbjct: 361 R 361
>gi|283856598|ref|YP_163733.2| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|283775610|gb|AAV90622.2| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 345
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 209/339 (61%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI R++
Sbjct: 12 LLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLPLVEDSEAAAEATLQPINRFH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIF 124
FDAAILFSDILVI ALG+++ F++ EGP++ P L+N +DL N L PI+
Sbjct: 72 FDAAILFSDILVIPYALGQDLTFIKGEGPKLTPA------LVNHRLDLLTKLPNRLTPIY 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++ +
Sbjct: 126 ETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEAI 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 186 IDLTVLYLDGQIEAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 246 FPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALDQ 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 306 SITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIR 344
>gi|260753413|ref|YP_003226306.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552776|gb|ACV75722.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 345
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 209/339 (61%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI R++
Sbjct: 12 LLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLSLVEDSEAAAEATLQPIDRFH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIF 124
FDAAILFSDILVI ALG+++ FV+ EGP++ P L+N +DL + L PI+
Sbjct: 72 FDAAILFSDILVIPYALGQDLTFVKGEGPKLTPA------LVNHRLDLLTKLPDRLTPIY 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++ +
Sbjct: 126 ETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEAI 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 186 IDLTVLYLDGQIKAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 246 FPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALDQ 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 306 SITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIR 344
>gi|163850923|ref|YP_001638966.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens PA1]
gi|163662528|gb|ABY29895.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens PA1]
Length = 370
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 216/361 (59%), Gaps = 22/361 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + + + L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE--------------FENYAARSVGR 228
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPALERHAGVLPESSDGDALKRYSLGPITR 251
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGP 284
++ VR + P+AK I FAKG+G L+ + R+ T ++A+G+DW V L + +
Sbjct: 252 MVQGVRAQVPDAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTV 309
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
QGNL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R
Sbjct: 310 TQGNLHPETLIEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGG 369
Query: 345 K 345
+
Sbjct: 370 R 370
>gi|254560612|ref|YP_003067707.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens DM4]
gi|254267890|emb|CAX23756.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens DM4]
Length = 370
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 216/361 (59%), Gaps = 22/361 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + + + L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE--------------FENYAARSVGR 228
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPALERHAGVLPESSDGDALKRYSLGPITR 251
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGP 284
++ VR + P+AK I FAKG+G L+ + R+ T ++A+G+DW V L + +
Sbjct: 252 MVQGVRAQVPDAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTV 309
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
QGNL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R
Sbjct: 310 TQGNLHPETLIEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGG 369
Query: 345 K 345
+
Sbjct: 370 R 370
>gi|241762341|ref|ZP_04760421.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241373135|gb|EER62774.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 345
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI R++
Sbjct: 12 LLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLPLVEDSEAAAEATLQPINRFH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIF 124
FDAAILFSDILVI LG+++ FV+ EGP++ P L+N +DL + L PI+
Sbjct: 72 FDAAILFSDILVIPYTLGQDLTFVKGEGPKLTPA------LVNHRLDLLTKLPDRLTPIY 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++ +
Sbjct: 126 ETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEAI 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 186 IDLTVLYLDGQIEAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 246 FPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALDQ 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 306 SITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIR 344
>gi|103488320|ref|YP_617881.1| uroporphyrinogen decarboxylase [Sphingopyxis alaskensis RB2256]
gi|123078055|sp|Q1GP74|DCUP_SPHAL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|98978397|gb|ABF54548.1| uroporphyrinogen decarboxylase [Sphingopyxis alaskensis RB2256]
Length = 342
Score = 278 bits (712), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 201/344 (58%), Gaps = 4/344 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K+L L+G P+WLMRQAGRYLPEYR +R+ FL++CY PE E+TL
Sbjct: 1 MKASPKKLLATLRGARHERTPLWLMRQAGRYLPEYRALRESKGGFLELCYDPEAAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FD AILFSDILVI ALG+++ F EGPR+ P +++ L
Sbjct: 61 QPIRRFGFDGAILFSDILVIPHALGQHLWFEAGEGPRLAPPLVDGALA---SLEAAPQRL 117
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++ +++ + LP T +GF G+PWTVA+YM++G KD R A+ + AF +
Sbjct: 118 DPVYATVARVAASLPPETTFLGFAGSPWTVATYMVAGRGSKDQAAARRMAFADPAAFGAI 177
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D ++D++ YL QI GVD +Q+FD+ AG L +FE + I+ ++ +P+
Sbjct: 178 IDAIADLTVTYLSGQIEQGVDAVQLFDSWAGSLSPAQFEQWVIAPNAGIVRRLKALHPDT 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KGAG L+ Y T +AIGLD +V ++A L + PVQGNLDP+ LV G
Sbjct: 238 PVIGFPKGAGGKLRAYAEETGVDAIGLDETVDPTWADAALPSQLPVQGNLDPLALVAGGA 297
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ IL S P IFNLGHGI P +V L+K VR
Sbjct: 298 ALDAAIDRILAAFPSRPHIFNLGHGIVPDTPVAHVEHLIKRVRG 341
>gi|148555742|ref|YP_001263324.1| uroporphyrinogen decarboxylase [Sphingomonas wittichii RW1]
gi|172048257|sp|A5VA70|DCUP_SPHWW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148500932|gb|ABQ69186.1| uroporphyrinogen decarboxylase [Sphingomonas wittichii RW1]
Length = 344
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 202/339 (59%), Gaps = 4/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL+G +PPP+WLMRQAGRYLPEYR +R+ FL++ Y + E+TLQPIRR
Sbjct: 9 RPLLAVLRGERRDPPPVWLMRQAGRYLPEYRALRETKGGFLELAYDSDAAAEITLQPIRR 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FD AILFSDIL+I A+G+++RF EGPR+ P +++ L PI+
Sbjct: 69 FGFDGAILFSDILIIPHAMGQDLRFEAGEGPRLSPTLVDRTLA---DLEPVPARLEPIYG 125
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R LP T +GF G+PWTVA+YM++G ++ + R AY++ F ++D L
Sbjct: 126 TVRRVRAALPAETTFLGFAGSPWTVATYMVAGQGSREQAETRRKAYRDPAGFQAIIDALV 185
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D +A+YL QI AGVD +Q+FD+ AG L EFE + +++ + ++P I F
Sbjct: 186 DATADYLSKQIEAGVDAVQLFDSWAGSLAPREFERWVIAPTAQLVRRLHARHPGVPVIGF 245
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KGAG L Y R T +A+GLD +V ++A EG VQGNLDP+ LV G + +
Sbjct: 246 PKGAGGKLPAYARETGVDAVGLDETVDPAWAHANLPEGLTVQGNLDPLALVSGGEGLDTA 305
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+AIL P +FNLGHGI +V L+ VR
Sbjct: 306 VDAILGAFPGRPHVFNLGHGILLDTPIAHVERLLARVRG 344
>gi|87198144|ref|YP_495401.1| uroporphyrinogen decarboxylase [Novosphingobium aromaticivorans DSM
12444]
gi|123491145|sp|Q2GC56|DCUP_NOVAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|87133825|gb|ABD24567.1| uroporphyrinogen decarboxylase [Novosphingobium aromaticivorans DSM
12444]
Length = 341
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 211/339 (62%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ LQG I+ PIWLMRQAGRYLPEYR++R + FL + Y + E+T+QPIRR+
Sbjct: 5 LLKTLQGENISRRPIWLMRQAGRYLPEYRELRAEKGGFLALVYDTDAAAEVTVQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIF 124
FD AILFSDIL++ A+G++++F+ EGP + P LL+ ++ + L PI+
Sbjct: 65 FDGAILFSDILIVPYAMGQDLQFLAGEGPHLSP------RLLDAALNSLVAVPGRLSPIY 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++++ ++ +L TL+GF G+PWTVA+YM++G +DH R AY++ AF ++D +
Sbjct: 119 ETVAKVKAQLSPETTLLGFAGSPWTVATYMVAGEGSRDHHDTRALAYRDPSAFQAIIDAI 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++V+ EYL Q+ AG + +Q+FD+ +G L EFE + RI SA++++YP+ I
Sbjct: 179 TEVTIEYLSGQVEAGAEGLQLFDSWSGSLAPAEFERWVIAPNARIASAMQQRYPHVPVIG 238
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG L Y R T NA+G+D ++ PL A EL PVQGNLDP+ L+ G +
Sbjct: 239 FPKGAGEKLSAYARETGVNAVGVDETIDPLWAARELPANMPVQGNLDPLLLLSGGPELER 298
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+L+ P +FNLGHGI +NV L+K VR
Sbjct: 299 QTIRVLEAFADRPHVFNLGHGIGQHTPIENVEALLKIVR 337
>gi|58616732|ref|YP_195931.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str. Gardel]
gi|58416344|emb|CAI27457.1| Uroporphyrinogen decarboxylase [Ehrlichia ruminantium str. Gardel]
Length = 335
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 205/324 (63%), Gaps = 6/324 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY++I K +FL+MCY PE E+TLQPI+R+N DAAI+FSDILVI
Sbjct: 15 PIWFMRQAGRYLPEYQKIAKNAPSFLEMCYNPEIVKEITLQPIKRFNLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DALG V F +++GP + I++ QEI N + L++L +FQSI +R+ L
Sbjct: 75 PDALGCKVTFTKDKGPELKEISSYQEIN--NISNSEILSHLSNVFQSIKEVRQCLHKDKA 132
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G PWTVA+YMI G K+ + + Y +R ++D +++ + YLI QI +G
Sbjct: 133 LIGFAGGPWTVATYMI--GRDKNFSKIKEMCYIKNRNLEKIIDKITEATISYLIKQIESG 190
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V+V+QIFD++AG L EFE + IIS+VR+ YP+ FI F KGAG + K + +
Sbjct: 191 VNVLQIFDSNAGVLSCEEFERWIINPTKEIISSVRKTYPDFPFIGFPKGAGVLYKKFTQE 250
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
T+ + +D+SVP+S+A E +QGN+DP L + I I++++ P IF
Sbjct: 251 TNVSVTSIDYSVPMSWAKE-NIPSIIQGNIDPYLLAYDKEGAISQAKKIINIMKKEPLIF 309
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHGI P +NV LV+ V+S
Sbjct: 310 NLGHGIIPSTPVENVQALVEFVKS 333
>gi|304320452|ref|YP_003854095.1| Uroporphyrinogen decarboxylase [Parvularcula bermudensis HTCC2503]
gi|303299354|gb|ADM08953.1| Uroporphyrinogen decarboxylase [Parvularcula bermudensis HTCC2503]
Length = 340
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 202/338 (59%), Gaps = 4/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ VL+G V PPIW MRQAGRYLPEYR +R FLD+CYTPE +TLQPI RY+
Sbjct: 4 LTSVLRGTVQEIPPIWFMRQAGRYLPEYRDLRANAGGFLDLCYTPEKAARVTLQPIDRYD 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIFQS 126
DAAILF+DIL++ ALG ++ F EGPR+ P + + +L D+ + L PI+++
Sbjct: 64 LDAAILFADILLVPQALGMDLWFEPGEGPRLAPALAEGDAAVLFEQRDIH-DRLGPIYET 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S +R LP LIGF GAPWTVA+YM++GG +KD R Y + F ++D L+D
Sbjct: 123 VSRVRAALPQEKALIGFAGAPWTVATYMLAGGSVKDPAGLRAVVYDDRERFAAIIDVLTD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q+ AG +VIQ+FD+ AG L E F+ + V RI +A+ R + + I F
Sbjct: 183 ATIDYLKKQVDAGAEVIQLFDSWAGGLPEALFDQFCVAPVARIAAAL-RAHADIPVIGFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+G+G + + L D A+ +D +P +A E L VQG LDP+ +V G M+
Sbjct: 242 RGSGPLYRKIAALPDIAAVSIDTGMPADWAAEALSPLAVVQGGLDPLLIVKGGTEMLKAA 301
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + PF+FN+GHG+ PQ P+NV LV VR
Sbjct: 302 DQLRASFEGRPFVFNVGHGLVPQTPPENVAALVNHVRG 339
>gi|57238748|ref|YP_179884.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578669|ref|YP_196881.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|57160827|emb|CAH57725.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417295|emb|CAI26499.1| Uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
Length = 335
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 205/324 (63%), Gaps = 6/324 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY++I K +FL+MCY PE E+TLQPI+R+N DAAI+FSDILVI
Sbjct: 15 PIWFMRQAGRYLPEYQKIAKNAPSFLEMCYNPEIVKEITLQPIKRFNLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DALG V F +++GP + I++ QEI N + L++L +FQSI +R+ L
Sbjct: 75 PDALGCKVTFTKDKGPELKEISSYQEIN--NISNSEILSHLSNVFQSIKEVRQCLHKDKA 132
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G PWTVA+YMI G K+ + + Y +R ++D +++V+ YLI QI +G
Sbjct: 133 LIGFAGGPWTVATYMI--GRDKNFSKIKEMCYIKNRNLEKIIDKITEVTISYLIKQIESG 190
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V+V+QIFD++AG L EFE + IIS+VR+ YP+ FI F KGAG + K + +
Sbjct: 191 VNVLQIFDSNAGVLSCEEFERWIINPTKEIISSVRKTYPDFPFIGFPKGAGVLYKKFTQE 250
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
T+ + +D+SVP+ +A E +QGN+DP L + I I++++ P IF
Sbjct: 251 TNVSVTSIDYSVPMFWAKE-NIPSIIQGNIDPYLLAYDKEGAISQAKKIINIMKEEPLIF 309
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHGI P +NV LV+ V+S
Sbjct: 310 NLGHGIIPSTPVENVQALVEFVKS 333
>gi|114326666|ref|YP_743823.1| uroporphyrinogen decarboxylase [Granulibacter bethesdensis CGDNIH1]
gi|122328348|sp|Q0BWA2|DCUP_GRABC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114314840|gb|ABI60900.1| uroporphyrinogen decarboxylase [Granulibacter bethesdensis CGDNIH1]
Length = 343
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/342 (41%), Positives = 211/342 (61%), Gaps = 6/342 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL VL+G + PP+WLMRQAGRYLPEYR++R K +FL + PE+ E+TLQPIRR
Sbjct: 3 KPILRVLRGEALPVPPVWLMRQAGRYLPEYREVRAKAGSFLGLATHPEWAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ DAAILFSDIL++ ALG + F E EGP + + +I L + + + PI +
Sbjct: 63 FGMDAAILFSDILMLPWALGYGLHFAEGEGPVLPKLEEADIDRL--DFSQLIPRIAPIME 120
Query: 126 SISILRKKLPN---HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ +R++L TLIGF GAP+TV+ YM+ GG K+ + R FAY N AF+ L+
Sbjct: 121 TVTRVREQLQQLHPETTLIGFAGAPFTVSCYMVDGGGAKEFPRTRHFAYTNPEAFDRLIA 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ + YL AQ+ AG +V+ +FD+ AG L F + +I +A++ ++P+
Sbjct: 181 RLTEATITYLSAQVEAGAEVLMLFDSWAGLLSPLSFARWVTAPARQITAALKARHPSVPV 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I F + AG +L+NY T NA+G+D SV + A ++ E +QGNLDP+ L G + M
Sbjct: 241 IGFPRLAGTLLQNYASETGVNAVGMDTSVDPAMARKMVPAEIALQGNLDPLALRAGGEAM 300
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V++I + P IFNLGHGI PQ P++V +L+ +R+
Sbjct: 301 RREVSSIRQAMAGHPHIFNLGHGIVPQTPPEHVAELLNLIRT 342
>gi|326386165|ref|ZP_08207789.1| uroporphyrinogen decarboxylase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209390|gb|EGD60183.1| uroporphyrinogen decarboxylase [Novosphingobium nitrogenifigens DSM
19370]
Length = 341
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 208/339 (61%), Gaps = 13/339 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+LE L+G + P+WLMRQAGRYLPEYR +R FL++ Y E E+TLQPIRR+
Sbjct: 5 LLETLKGANLATRPVWLMRQAGRYLPEYRALRADKGGFLELVYDSEAAAEITLQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIF 124
FD AILFSDIL++ A+G+N++F+ EGP + P LL+ +D + LL I+
Sbjct: 65 FDGAILFSDILIVPHAMGQNLQFLAGEGPHLSP------RLLDAALDTLVAVPERLLAIY 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R L TL+GF G+PWTVA+YM++G +D + R AY++ AF ++D +
Sbjct: 119 DTVARVRGALGPETTLLGFAGSPWTVATYMVAGEGSRDQHETRALAYRDPAAFQAIIDAI 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+V+ +YL Q+ AG + +Q+FD+ AG L EFE + RI++A++ ++P I
Sbjct: 179 VEVTIDYLSGQVAAGAEGLQLFDSWAGTLAPAEFERWVIAPNARIVAAMKERHPEIPVIG 238
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG L Y R T +A+G+D ++ PL A L + PVQGNLDP+ L+ G ++
Sbjct: 239 FPKGAGEKLPAYARETGVDAVGIDETIDPLWAAANLPEGLPVQGNLDPLLLLAGGDMLET 298
Query: 304 GVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVK 339
A+LD P +FNLGHGI TP + +LD+V+
Sbjct: 299 RACAVLDAFADRPHVFNLGHGIGQFTPIAHVERLLDVVR 337
>gi|158426341|ref|YP_001527633.1| uroporphyrinogen decarboxylase [Azorhizobium caulinodans ORS 571]
gi|158333230|dbj|BAF90715.1| uroporphyrinogen decarboxylase [Azorhizobium caulinodans ORS 571]
Length = 321
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 196/325 (60%), Gaps = 12/325 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R K +FL +CYTPE E+TLQPIRR+ FDAAI+FSDILV+ AL
Sbjct: 1 MRQAGRYLPEYREVRAKAGDFLTLCYTPELAAEVTLQPIRRFGFDAAIIFSDILVVPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQE-----IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +VRF EGPR+ P+T + LL+P + P++++I+ + +LP
Sbjct: 61 GVDVRFEAGEGPRLAPVTDKAGLDGLRRLLDPA------RVQPVYEAITRVSSELPRETA 114
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCGAPWTVA+YMI+G D R+ A ++ F L+D L D S +L AQI AG
Sbjct: 115 LIGFCGAPWTVATYMIAGQGTDDQAPARLMALRDPDFFQELIDRLVDASIHHLRAQIEAG 174
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
DV+QIFDT AG L H FE + R + RI+SAV+ + NA+ I+F +GA
Sbjct: 175 CDVVQIFDTWAGVLDPHSFERWCVRPLRRIVSAVKASHRNARIIAFPRGASLEGLEKIAA 234
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
N I +DW++ A L + +QGNLDP+RL+ G + + + +I I
Sbjct: 235 LPLNGISVDWTIDREAARARLGDKVAIQGNLDPLRLIAGGPQLDEEILSIRKDFDGIRHI 294
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHGI P+ +V LV+ VR
Sbjct: 295 FNLGHGIKPETPIAHVEKLVEKVRE 319
>gi|239946628|ref|ZP_04698381.1| uroporphyrinogen decarboxylase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|241563466|ref|XP_002401715.1| uroporphyrinogen decarboxylase, putative [Ixodes scapularis]
gi|215501907|gb|EEC11401.1| uroporphyrinogen decarboxylase, putative [Ixodes scapularis]
gi|239920904|gb|EER20928.1| uroporphyrinogen decarboxylase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 346
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++IL L+GN N PIW MRQAGRYL EY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQILNPLKGNS-NKIPIWFMRQAGRYLSEYKKVRETTKNFLDFCYDVNKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLL---NPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + NPN N L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENVGPILKQFKSQEDFKYLQSNPN-----NKLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 IYEIIKKVKKELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQARSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPV 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D +PL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDILAVDQMIPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL V+ FIFNLGHGI P+ P+N+ L + VR
Sbjct: 296 EKAYKILQVMKGKNFIFNLGHGILPETPPENIEFLTEYVR 335
>gi|85709808|ref|ZP_01040873.1| uroporphyrinogen decarboxylase [Erythrobacter sp. NAP1]
gi|85688518|gb|EAQ28522.1| uroporphyrinogen decarboxylase [Erythrobacter sp. NAP1]
Length = 342
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 202/338 (59%), Gaps = 6/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+LE L+GN P+WLMRQAGRYLPEYR++R + FL++ Y E E+T+QPIRR+
Sbjct: 5 LLETLKGNRQKIAPVWLMRQAGRYLPEYRELRAEKGGFLELVYDSEAAAEITVQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G+ + F+ EGP++ P + + P + F P++++
Sbjct: 65 FDGAILFSDILIVPHAMGQGLEFLAGEGPKLSPTLLETTMGSFEPQFERFE----PVYET 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ R ++ + +T++GF G+PWTVA+YMI+G KD G R+ AY++ + D +++
Sbjct: 121 VRQTRAQIADTVTMLGFAGSPWTVATYMIAGEGSKDQGPARLLAYRDPGLMQDICDRIAE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
VS EYL QI AG + +Q+FD+ AG L EFE + +I +A++R +P I F
Sbjct: 181 VSVEYLRGQIDAGAEAVQLFDSWAGSLAPDEFERWVVAPNAKITAAIKRSHPETPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y R T +AIGLD ++ +A E+ +G PVQGN DP+ + G +
Sbjct: 241 KGAGAKLPGYARETGVDAIGLDETLDPVWAHEVLPDGMPVQGNFDPLLIEAGGPALAVRA 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL+ P +FNLGHGI ++V L+ VR
Sbjct: 301 RTILEAFEDRPHVFNLGHGIGQFTPIEHVEQLLAAVRG 338
>gi|15893297|ref|NP_361011.1| uroporphyrinogen decarboxylase [Rickettsia conorii str. Malish 7]
gi|34581040|ref|ZP_00142520.1| uroporphyrinogen decarboxylase [Rickettsia sibirica 246]
gi|23814003|sp|Q92FV3|DCUP_RICCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|15620519|gb|AAL03912.1| uroporphyrinogen decarboxylase [Rickettsia conorii str. Malish 7]
gi|28262425|gb|EAA25929.1| uroporphyrinogen decarboxylase [Rickettsia sibirica 246]
Length = 346
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 207/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNYKL-----EK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL V+ FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQVMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|229587260|ref|YP_002845761.1| uroporphyrinogen decarboxylase [Rickettsia africae ESF-5]
gi|259645156|sp|C3PM28|DCUP_RICAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|228022310|gb|ACP54018.1| Uroporphyrinogen decarboxylase [Rickettsia africae ESF-5]
Length = 346
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 208/340 (61%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNYKL-----EK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENRILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G D++++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADILKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLKKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL V+ FIFNLGHGI P+ +NV L++ VR
Sbjct: 296 EKTYKILQVMKGKNFIFNLGHGILPETPTENVEFLIEYVR 335
>gi|209966067|ref|YP_002298982.1| uroporphyrinogen decarboxylase [Rhodospirillum centenum SW]
gi|209959533|gb|ACJ00170.1| uroporphyrinogen decarboxylase [Rhodospirillum centenum SW]
Length = 346
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 196/341 (57%), Gaps = 4/341 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L L G PP WLMRQAGRYLPEYR++R + FLD+C P E+TLQP+RR
Sbjct: 7 KPFLRALAGETQTRPPFWLMRQAGRYLPEYREVRAQAGGFLDLCLKPALGCEVTLQPLRR 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y DAAILFSDIL++ ALG++V F E EGPR+ I L + D P+++
Sbjct: 67 YGMDAAILFSDILLVPHALGQSVGFAEGEGPRLAAIRDMN-GLRALDFDGLHRRAEPVYE 125
Query: 126 SISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ +R+ L LIGF G+PWTVA YM+ G K++ + +A+ + F L+D
Sbjct: 126 TVRRIRENLDKDFPTTALIGFAGSPWTVACYMVEGQGSKEYMHVKQWAFSDPEGFGQLID 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + EY+ AQI AG + +Q+FD+ AG L F + + I+ A+R ++P
Sbjct: 186 LLVRATVEYISAQIKAGAEAVQLFDSWAGALPVDGFHQWVIKPTRAIVDALRARHPGVPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F + AG L+ Y R T + + LD VP ++A E K +QGNLDP+ L+ G M
Sbjct: 246 IGFPRQAGLNLEAYVRETGVDGVSLDPGVPAAWASETLKGVTLQGNLDPVLLLTGGAAMR 305
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV +L+ + PFIFNLGHGI + P++V +L + +R
Sbjct: 306 RGVTELLEAMSGRPFIFNLGHGILKETPPEHVAELTRLLRG 346
>gi|238651132|ref|YP_002916990.1| uroporphyrinogen decarboxylase [Rickettsia peacockii str. Rustic]
gi|259645157|sp|C4K2Z1|DCUP_RICPU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238625230|gb|ACR47936.1| uroporphyrinogen decarboxylase [Rickettsia peacockii str. Rustic]
Length = 346
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNYKL-----EK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|67459792|ref|YP_247416.1| uroporphyrinogen decarboxylase [Rickettsia felis URRWXCal2]
gi|75535820|sp|Q4UJN8|DCUP_RICFE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|67005325|gb|AAY62251.1| Uroporphyrinogen decarboxylase [Rickettsia felis URRWXCal2]
Length = 346
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 199/328 (60%), Gaps = 8/328 (2%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PIW MRQAGRYLPEY+++R+K KNFLD CY E+TLQPI+RY FDAAI+FSDI
Sbjct: 13 NKIPIWFMRQAGRYLPEYKKVREKTKNFLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLL---NPNIDLFLNYLLPIFQSISILRKKL 134
LV+ ALG V F EN GP + +QE + NPN N L +++ I ++++L
Sbjct: 73 LVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQSNPN-----NKLEKVYEIIKKVKEEL 127
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
P+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F+++ +A++L+
Sbjct: 128 PSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLNFITEKTADHLVN 187
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
Q +G DV+++FD+ +G LGE EF + +II V+ +P I+F KGA + +
Sbjct: 188 QAKSGADVLKLFDSWSGVLGEEEFTEFVIEPTKKIILKVKEDFPKIPIIAFPKGAVLLYE 247
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ + + + +D VPL E + VQGNLDP+ L+ +++ + IL +
Sbjct: 248 KFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIKEKAYKILQTMKG 307
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVR 342
FIFNLGHGI P+ P+NV L + VR
Sbjct: 308 KNFIFNLGHGILPETPPENVKFLTEYVR 335
>gi|157829207|ref|YP_001495449.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933933|ref|YP_001650722.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. Iowa]
gi|166234283|sp|A8GU66|DCUP_RICRS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083015|sp|B0BVQ6|DCUP_RICRO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157801688|gb|ABV76941.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909020|gb|ABY73316.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. Iowa]
Length = 346
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN + PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-DKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNYKL-----EK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|307326446|ref|ZP_07605641.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
gi|306887854|gb|EFN18845.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
Length = 384
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 207/349 (59%), Gaps = 15/349 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+ +L L G PPIWLMRQAGRYLPEY +R+ + +C +PE+ VE+TLQP+R
Sbjct: 21 KKLLLRALAGERTERPPIWLMRQAGRYLPEYHDVREAAGGMVGLCNSPEHAVEVTLQPLR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY----- 119
R+ DAAILF+D+ IA ALG+ + + +GP + P +I FL+
Sbjct: 81 RFTLDAAILFADLPQIAAALGQTLEYRVGDGPVLTPPIRS-----TSDITEFLSASRLHE 135
Query: 120 -LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISG-GFIKDHGQNRVFAYQNSRAF 177
L PI++++ L + LP+ +TLIG+ GAPWTVA+YM+ G G +H + +A + F
Sbjct: 136 ELAPIYETVRQLTRALPDEVTLIGYAGAPWTVATYMVEGRGGGPEHSIVKQWALSDPEGF 195
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D L+ + E+L QI AG + IQ+F++ AG L + F+ + V I++A++ K+
Sbjct: 196 QPLIDLLTAATIEFLDRQIQAGAEAIQLFESWAGILPDPLFQRWCVTPVAAIVAALKAKH 255
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE--GPVQGNLDPMRL 294
P+ I+F +GAG K + T + +GLD +VP+ +A + +Q E VQGNLDP L
Sbjct: 256 PSVPIIAFPRGAGLAYKGFAEATGVDCVGLDSTVPVEWAAQKVQHELGRCVQGNLDPQLL 315
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V G + + IL+ L GPF+FNLGHGI P++V L + VRS
Sbjct: 316 VAGGPALHAETDRILNALSGGPFVFNLGHGIVKTTPPEHVAALAQQVRS 364
>gi|172046007|sp|A8F331|DCUP_RICM5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGND-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ A G V F EN GP + +QE + +NPN + L
Sbjct: 61 YGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQFKSQEDFKYLQINPN-----DKLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +GVDV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 176 FITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|157965040|ref|YP_001499864.1| uroporphyrinogen decarboxylase [Rickettsia massiliae MTU5]
gi|157844816|gb|ABV85317.1| Uroporphyrinogen decarboxylase [Rickettsia massiliae MTU5]
Length = 361
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 17 KQIINPLKGND-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQPIKR 75
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ A G V F EN GP + +QE + +NPN + L
Sbjct: 76 YGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQFKSQEDFKYLQINPN-----DKLEK 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 131 VYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +GVDV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 191 FITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPI 250
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 251 IAFPKGAGLLYEKFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 310
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 311 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 350
>gi|83944960|ref|ZP_00957326.1| uroporphyrinogen decarboxylase [Oceanicaulis alexandrii HTCC2633]
gi|83851742|gb|EAP89597.1| uroporphyrinogen decarboxylase [Oceanicaulis alexandrii HTCC2633]
Length = 345
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 201/346 (58%), Gaps = 3/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ Q L L G ++PPPIWLMRQAGRYLPEYR++R + +F++ C + E+TL
Sbjct: 1 MTDQNQPFLRALAGETVSPPPIWLMRQAGRYLPEYREVRAQQPDFINFCLNSDAAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+I+F+DIL+I LG+ V F + EGP+++P+ + + L +++ L
Sbjct: 61 QPIRRYGFDASIVFADILLIPYGLGQKVWFEKGEGPKLEPLALENLGAL--SVERANEVL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +I +R LP +LIGF G+PWTVA+YMI GG KD R A+ AF+ L
Sbjct: 119 RPVSDTIRKVRAGLPETCSLIGFAGSPWTVATYMIEGGGSKDRINARTLAWSQPDAFDTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++ SA+YL AQ AG + +++FD+ A L + F+ R RII +R+
Sbjct: 179 LDLLAEASAQYLKAQADAGANALKLFDSWAEGLPDPLFDRVIIRPTKRIIDRLRQMGVTL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAG Y + T + LD + +A K+ P+QG LDP L G
Sbjct: 239 PVIGFPRGAGPQAVRYAKETGIQCLALDHGLDTDWARGAFPKDLPLQGQLDPAVLRAGGD 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++ +L P++FNLGHGI P+NV L++ VR K
Sbjct: 299 VLDSEIDRLLSAWAGRPYVFNLGHGIHLDTPPENVTRLIERVRGFK 344
>gi|73666643|ref|YP_302659.1| uroporphyrinogen decarboxylase HemE [Ehrlichia canis str. Jake]
gi|72393784|gb|AAZ68061.1| Uroporphyrinogen decarboxylase HemE [Ehrlichia canis str. Jake]
Length = 334
Score = 265 bits (678), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 199/327 (60%), Gaps = 13/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEY ++ +K +FL++CYTPE E+TLQP++R+ DAAI+FSDILVI
Sbjct: 15 PVWFMRQAGRYLPEYHEVARKAGSFLELCYTPELVKEVTLQPVKRFGLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL----FLNYLLPIFQSISILRKKLPN 136
DALG NV F + GP + I++ + ID+ +++L +F+ I +RK L
Sbjct: 75 PDALGCNVEFTKENGPSLQLISSHK------EIDVPEKAVIDHLKKVFEGIKEVRKSLQK 128
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
LIGF GAPWT+ASYMI G K+ + R +Y + ++ ++ V+ YLI QI
Sbjct: 129 SKPLIGFAGAPWTIASYMI--GRDKNFSKIREMSYLQDKELGKIIKKITKVTISYLIKQI 186
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+GVD+IQIFD++AG + +EF + I+S++R+ YP I F KGAG M K +
Sbjct: 187 ESGVDIIQIFDSNAGIVSANEFRKWIINPTREIVSSIRKLYPEFPIIGFPKGAGIMYKQF 246
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
T+ + +D++VP+S+A + +QGN+DP + I +++++ P
Sbjct: 247 SEETEVSVTSIDYNVPISWAKD-NISSILQGNIDPYLVAYDKSKAISQTKDLINIMKDEP 305
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
FIFNLGHGI P N+ L++TV+S
Sbjct: 306 FIFNLGHGIIPSTPIANIEALIETVKS 332
>gi|94496599|ref|ZP_01303175.1| uroporphyrinogen decarboxylase [Sphingomonas sp. SKA58]
gi|94423959|gb|EAT08984.1| uroporphyrinogen decarboxylase [Sphingomonas sp. SKA58]
Length = 352
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 203/341 (59%), Gaps = 6/341 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L VL+G PP+WLMRQAGRYLPEYR++R FL++ Y E+TLQP+RR
Sbjct: 12 KKLLGVLRGERPAVPPVWLMRQAGRYLPEYRELRADKGGFLELVYDSAAAAEVTLQPLRR 71
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIF 124
+ FD AILFSDIL++ A+G+++ F EGPR+ PI + ++ L P F ++
Sbjct: 72 FGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSALTPEWSRFDA----VY 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++ L ++T +GF G+PWT+A+YM++G KDHG R AY F L+D +
Sbjct: 128 DTVRRVKAALNPNVTFLGFAGSPWTIATYMVAGQGSKDHGAARRMAYCEPDRFAALIDAI 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + YL QI GV+ +Q+FD+ +G L +FE + RI++A++ ++P+ I
Sbjct: 188 IDATVTYLSGQIATGVEAVQLFDSWSGSLAPIQFERWVIDPNRRIVAALKERHPDVPVIG 247
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KGAG L +Y T +A+G+D ++ +A G PVQGNLDP+ L+ G + + +
Sbjct: 248 FPKGAGAKLADYAVQTGVDAVGVDETIDPHWAHGALPAGMPVQGNLDPLALIAGGRAVEE 307
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+AI P IFNLGHGI P +V L+ VR +
Sbjct: 308 AVDAIRAAFADRPHIFNLGHGILPDTPIAHVEALLSYVRQQ 348
>gi|294013515|ref|YP_003546975.1| uroporphyrinogen decarboxylase [Sphingobium japonicum UT26S]
gi|292676845|dbj|BAI98363.1| uroporphyrinogen decarboxylase [Sphingobium japonicum UT26S]
Length = 353
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 204/340 (60%), Gaps = 6/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL+G + PP+WLMRQAGRYLPEYR +R + FL++ Y E+TLQP+RR
Sbjct: 15 KPLLSVLKGALPAVPPMWLMRQAGRYLPEYRALRAEKGGFLELVYDSAAAAEVTLQPLRR 74
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIF 124
+ FD AILFSDIL++ A+G+++ F EGPR+ PI + ++ L P+ + ++
Sbjct: 75 FGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSTLKPDFSRYEA----VY 130
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++ L +T +GF G+PWT+A+YM++G KD G R AY+ F ++D +
Sbjct: 131 ETVRQVKAALDPQVTFLGFAGSPWTIATYMVAGQGSKDQGAARRMAYRQPDKFGAIIDAI 190
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + YL QI AGV+ +Q+FD+ AG L EFE + R RI+ ++ +P+ I
Sbjct: 191 IDATVVYLCGQIEAGVEAVQLFDSWAGSLAPLEFERWVIRPNRRIVEKLKAIHPDIPVIG 250
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KGAG L +Y T +A+G+D +V +A + +G PVQGNLDP+ L+ G + + +
Sbjct: 251 FPKGAGAKLADYAVGTGVDAVGVDETVDPHWANRVLPQGLPVQGNLDPLALIAGGRAVEE 310
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ I P IFNLGHGI P +V L+ VR+
Sbjct: 311 AVDNIRAAFAGRPHIFNLGHGILPDTPIDHVEALLSYVRA 350
>gi|88657828|ref|YP_506863.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis str.
Arkansas]
gi|88599285|gb|ABD44754.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis str.
Arkansas]
Length = 334
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 198/324 (61%), Gaps = 7/324 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEYR++ ++ +FL++CYTPE E+TLQP+RR+ DAAI+FSDILVI
Sbjct: 15 PVWFMRQAGRYLPEYRKVAEEAGSFLELCYTPELVKEVTLQPVRRFGLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DALG V F + +GP + I+ EI + + L++L +F+ I +RK L
Sbjct: 75 PDALGCKVEFTKEKGPELQLISNHSEISVPE---EAALDHLKNVFRGIKEVRKSLQRDKP 131
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAPWT+ASYMI G K+ + R Y ++ +++ ++ V+ YLI QI +G
Sbjct: 132 LIGFAGAPWTIASYMI--GRDKNFSKIREMCYSQTKNLEKIVEKITKVTTLYLIKQIESG 189
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD+IQIFD++AG + EF+ + I+S++R+ YP I F KGAG M K +
Sbjct: 190 VDIIQIFDSNAGIVPAGEFKKWIIDPTKEIVSSIRKLYPEFPIIGFPKGAGVMYKQFSEE 249
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
T+ + +D++ P+S+A + +QGN+DP + I +++++ PFIF
Sbjct: 250 TEVSVTSVDYNTPMSWA-KSNIPSVLQGNIDPYLVAYDKSKAISQTKELINIMKDKPFIF 308
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHG+ P N+ LV T++S
Sbjct: 309 NLGHGVIPSTPIANIAALVDTIKS 332
>gi|307297040|ref|ZP_07576856.1| uroporphyrinogen decarboxylase [Sphingobium chlorophenolicum L-1]
gi|306877566|gb|EFN08794.1| uroporphyrinogen decarboxylase [Sphingobium chlorophenolicum L-1]
Length = 353
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 203/344 (59%), Gaps = 6/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L VL+G PP+WLMRQAGRYLPEYR +R + FL++ Y E+TLQ
Sbjct: 11 GQTPKPLLSVLKGACPVVPPMWLMRQAGRYLPEYRALRAEKGGFLELVYDSAAAAEVTLQ 70
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYL 120
P+RR+ FD AILFSDIL++ A+G+++ F EGPR+ PI + ++ L P+ +
Sbjct: 71 PLRRFGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSALKPDFSRYEA-- 128
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+++++ ++ L +T +GF G+PWT+A+YM++G KD G R AY F +
Sbjct: 129 --VYETVRQVKAALDPDVTFLGFAGSPWTIATYMVAGQGSKDQGAARRMAYSQPEKFGAI 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ + D + YL QI AGV+ +Q+FD+ AG L EFE + R RI+ ++ +P+
Sbjct: 187 IEAIVDATLVYLSGQIEAGVEAVQLFDSWAGSLAPLEFERWVIRPNRRIVERLKAIHPDI 246
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQ 299
I F KGAG L +Y T +A+G+D +V +A + +G PVQGNLDP+ L+ G +
Sbjct: 247 PVIGFPKGAGAKLADYAAGTGVDAVGVDETVDPHWANRVLPQGLPVQGNLDPLALIAGGK 306
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V+ I P IFNLGHGI P +V L+ VR+
Sbjct: 307 AVEEAVDNIRAAFAGRPHIFNLGHGILPDTPIDHVEALLSYVRA 350
>gi|296284838|ref|ZP_06862836.1| uroporphyrinogen decarboxylase [Citromicrobium bathyomarinum JL354]
Length = 341
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 6/320 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L+G PP+W MRQAGRYLPEYR +R + FLD+ Y E E+TLQP+RR+
Sbjct: 5 LLDCLRGERAESPPVWFMRQAGRYLPEYRALRAEKGGFLDLVYDSEAACEVTLQPVRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G+ + F+ EGP++ P + E+ L+ + + PI+Q+
Sbjct: 65 FDGAILFSDILIVPHAMGQTLEFLAGEGPKLSPPLVESELAGLSADPSRYD----PIYQT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + RK+L +T++GF G+PWTVA+YMI+G +D R AY + ++ + D
Sbjct: 121 VRLCRKQLAPDVTMLGFAGSPWTVATYMIAGEGSRDQHAARAMAYADPGKVEAIIGAIID 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ YL QI AG + +Q+FD+ AG L EF+ + RI++A++ +P+ I F
Sbjct: 181 QTVGYLRGQIDAGAEAVQLFDSWAGSLAPDEFDRWVIEPNARIVAAIKDSHPDIPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y T +A+GLD ++ +A L K PVQGNLDPM L+ G + +
Sbjct: 241 KGAGEKLPRYAERTGVDAVGLDETLDPEWAHAALPKGMPVQGNLDPMLLLAGGDRLDHTI 300
Query: 306 NAILDVLGSGPFIFNLGHGI 325
IL L P +FNLGHGI
Sbjct: 301 RHILSALADRPHVFNLGHGI 320
>gi|114848863|gb|ABI83634.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis]
Length = 334
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 198/324 (61%), Gaps = 7/324 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEYR++ ++ +FL++CYTPE E+TLQP+RR+ DAAI+FSDILVI
Sbjct: 15 PVWFMRQAGRYLPEYRKVVEEAGSFLELCYTPELVKEVTLQPVRRFGLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DALG V F + +GP + I+ EI + + L++L +F+ I +RK L
Sbjct: 75 PDALGCKVEFTKEKGPELQLISNHSEISVPE---EAALDHLKNVFRGIKEVRKSLQRDKP 131
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAPWT+ASYMI G K+ + R Y ++ +++ ++ V+ YLI QI +G
Sbjct: 132 LIGFAGAPWTIASYMI--GRDKNFSKIREMCYSQTKNLEKIVEKITKVTTLYLIKQIESG 189
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD+IQIFD++AG + EF+ + I+S++R+ YP I F KGAG M K +
Sbjct: 190 VDIIQIFDSNAGIVPAGEFKKWIIDPTKEIVSSIRKLYPEFPIIGFPKGAGVMYKQFSEE 249
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
T+ + +D++ P+S+A + +QGN+DP + I +++++ PFIF
Sbjct: 250 TEVSVTSVDYNTPMSWA-KSNIPSVLQGNIDPYLVAYDKSKAISQTKELINIMKDKPFIF 308
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHG+ P N+ LV T++S
Sbjct: 309 NLGHGVIPSTPIANIEALVDTIKS 332
>gi|332186998|ref|ZP_08388739.1| uroporphyrinogen decarboxylase [Sphingomonas sp. S17]
gi|332013008|gb|EGI55072.1| uroporphyrinogen decarboxylase [Sphingomonas sp. S17]
Length = 322
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/322 (40%), Positives = 194/322 (60%), Gaps = 4/322 (1%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+WLMRQAGRYLPEYR++R + FL + P+ E+T+QPIRR+ FD AILFSDIL++
Sbjct: 1 MWLMRQAGRYLPEYRELRAQKGGFLALATDPDAAAEVTVQPIRRFGFDGAILFSDILMVP 60
Query: 82 DALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
ALG+++ F EGPR+ P + LN + L P++ +++ ++ +LP+ + +
Sbjct: 61 WALGQDLSFGAGEGPRLAPALVD--HALN-ALQRAPERLDPVYATVARVKAQLPSQTSFL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWTVA+YM++G KD G+ R FAY + F +++ + +++ +YL Q+ GV+
Sbjct: 118 GFAGSPWTVATYMVAGQGSKDQGETRRFAYADPEGFGAIIEAIVEMTIDYLAGQVANGVE 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L +FE + I+ R + P I F KGAG L Y R T
Sbjct: 178 AVQLFDSWAGSLSPAQFERWVIAPNAAIVEGFRARCPGVPVIGFPKGAGGKLPAYARETG 237
Query: 262 SNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+GLD +V P+ L K+ PVQGNLDP+ L+ G + + V+ IL + P IFN
Sbjct: 238 VDAVGLDETVDPVWADTHLPKDLPVQGNLDPLALIAGGEALDSAVDRILAAFTARPHIFN 297
Query: 321 LGHGITPQVDPKNVLDLVKTVR 342
LGHGI P +V L+ VR
Sbjct: 298 LGHGILPDTPIAHVEHLIARVR 319
>gi|157827861|ref|YP_001496925.1| uroporphyrinogen decarboxylase [Rickettsia bellii OSU 85-389]
gi|166234281|sp|A8GYD8|DCUP_RICB8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157803165|gb|ABV79888.1| uroporphyrinogen decarboxylase [Rickettsia bellii OSU 85-389]
Length = 340
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 205/327 (62%), Gaps = 4/327 (1%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PPIWLMRQAGRYLPEY +RK+ KNFL+ CY + E+TLQPI+R+ FDAAI+FSDI
Sbjct: 13 NKPPIWLMRQAGRYLPEYMAVRKEVKNFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSISILRKKLPN 136
LV+ ALG V F EN GP + ++E + L N + + L +++ + +RK+LP
Sbjct: 73 LVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSN---DKLEKVYEIVKKVRKELPK 129
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+LIGF G+PWTV +YM+ G +D ++ F Y+N LL+F+++ + +LI QI
Sbjct: 130 STSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQI 189
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+G ++I+IFD+ AG L E EF+ + +II +++ +P+ I+F KGAG + + +
Sbjct: 190 KSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKF 249
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
++ I +D +PL + VQGNLDP+ L+ +++ + ++ IL ++ +
Sbjct: 250 LEEVPTDIIAIDPLIPLEKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKN 309
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
FIFNLGHGI P+ P+NV LVK +R
Sbjct: 310 FIFNLGHGILPETPPENVEFLVKCIRE 336
>gi|58039500|ref|YP_191464.1| uroporphyrinogen decarboxylase [Gluconobacter oxydans 621H]
gi|81672676|sp|Q5FS38|DCUP_GLUOX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58001914|gb|AAW60808.1| Uroporphyrinogen decarboxylase [Gluconobacter oxydans 621H]
Length = 353
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 200/344 (58%), Gaps = 8/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L L+G + PPP+WLMRQAGRYLPE+R +R + +FL C TP+ ELT+QPIR
Sbjct: 12 SKPLLRALRGEAVWPPPVWLMRQAGRYLPEFRAMRDR-ADFLTRCMTPDMATELTIQPIR 70
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPI 123
RY D AILFSDIL++ A+G+++ F++ GP + I ++ ++ L+P + + P+
Sbjct: 71 RYGMDGAILFSDILILPWAMGQSLEFIDGRGPVLGAIRSEADLARLDPK--RVQDAVAPV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++S L K+LP+ TL+GF G+P+TV+ YM+ GG +D + R N F+ L+D
Sbjct: 129 RETLSRLTKELPDVTTLLGFAGSPFTVSCYMVEGGGSRDFAETRRMMQTNPALFDRLIDT 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ +AE L QI AG + + +FD+ AG L F Y +I+ +R ++P I
Sbjct: 189 LTSSTAEMLCGQIEAGAEAVMLFDSWAGILPPSAFRRYVIEPTRQIVEYIRARHPKTPII 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG----PVQGNLDPMRLVVGNQ 299
F + G M++ Y + T N + LD + EL E +QGN+DPM L G +
Sbjct: 249 GFPRLGGIMVREYAQKTGVNTLALDTVADPAQISELVSEVRPGLTLQGNMDPMILFSGGE 308
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
MI AI D + P +FNLGHG+ P+NV LV+ VR+
Sbjct: 309 TMIREAQAIRDAMRGKPHVFNLGHGVMQHTPPENVAALVEAVRA 352
>gi|51474053|ref|YP_067810.1| uroporphyrinogen decarboxylase [Rickettsia typhi str. Wilmington]
gi|81692268|sp|Q68VM8|DCUP_RICTY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|51460365|gb|AAU04328.1| Uroporphyrinogen III decarboxylase [Rickettsia typhi str.
Wilmington]
Length = 345
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 198/326 (60%), Gaps = 4/326 (1%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PIW MRQAGRYLPEY+++R+ KNFLD C+ E+TLQPIRRY DAAI+FSDI
Sbjct: 12 NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCFDVNKATEVTLQPIRRYGLDAAIIFSDI 71
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSISILRKKLPN 136
LV+ ALG V F EN GP + +Q+ + L + + N L +F+ I +++KLP+
Sbjct: 72 LVLPSALGWEVDFKENIGPVLKQFKSQKDFQYLQRDSN---NKLENVFKIIKKVKEKLPS 128
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F+++ +A+YLI Q
Sbjct: 129 NTSLIGFAGSPWTVMSYMLEGKGKRDFITSKKFVYENKILAKDLLNFITEKTADYLINQA 188
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+G D+++IFD+ +G L E +F + +II V+ + N I+F KGAG + + +
Sbjct: 189 KSGADILKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFINIPIITFPKGAGLLYEKF 248
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ + + +D VPL E + VQGNLDP+ L+ +++ + IL +
Sbjct: 249 IKEVPIDILAVDQMVPLEKMKEWSNKVIVQGNLDPVVLLTNKEIIEEKTYKILQGMKGKN 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVR 342
FIFNLGHGI P+ P+NV L K +R
Sbjct: 309 FIFNLGHGILPETPPENVEFLTKYIR 334
>gi|85375428|ref|YP_459490.1| uroporphyrinogen decarboxylase [Erythrobacter litoralis HTCC2594]
gi|122543380|sp|Q2N6J8|DCUP_ERYLH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84788511|gb|ABC64693.1| uroporphyrinogen decarboxylase [Erythrobacter litoralis HTCC2594]
Length = 341
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 198/338 (58%), Gaps = 6/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L + P+WLMRQAGRYLPEYR++R + FL++ Y E E+TLQPIRR+
Sbjct: 5 LLDTLNRTRSDRVPLWLMRQAGRYLPEYRELRARKGGFLELVYDSEAAREVTLQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ ALG+ + F+ EGP + P + E+ L+ L I+++
Sbjct: 65 FDGAILFSDILIVPHALGQKLEFLAGEGPHLSPRLADAELEALS----TVPERLDAIYET 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +R L TL+GF G+PWTVA+YM++G +D R AY + ++D + D
Sbjct: 121 VRQVRAALDPETTLLGFAGSPWTVATYMVAGEGSRDQQAARSMAYTDPGKLQAIVDAIID 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ EYL+ QI AG + +Q+FD+ AG L +FE + I+ ++ P+A I F
Sbjct: 181 LTVEYLVGQIDAGAEAVQLFDSWAGSLAPDQFERWVIAPNAAIVRRLKEARPDALVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y T +AI LD ++ ++A + +G PVQGNLDP++++ G M++
Sbjct: 241 KGAGAKLSAYAAGTGVDAIALDETIDPAWAHTVLPDGMPVQGNLDPLQILAGGDAMVERT 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AIL L P +FNLGHGI +V LV TVR+
Sbjct: 301 KAILGALADRPHVFNLGHGIDKHTPIGHVERLVDTVRN 338
>gi|190571243|ref|YP_001975601.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018641|ref|ZP_03334449.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|238058173|sp|B3CM33|DCUP_WOLPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|190357515|emb|CAQ54951.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995592|gb|EEB56232.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 338
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 201/344 (58%), Gaps = 8/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPP-PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I+ +++ N N PIWLMRQAGR LPEYR+ +K NF+++CY+ + VELT
Sbjct: 1 MESNKPAIVRIIKQNKPNEKVPIWLMRQAGRSLPEYRKAVEKTSNFMEICYSIDLVVELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI+R++ DAAI+FSDIL+IAD LG +V FV GP + P+ + E N F
Sbjct: 61 LQPIKRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVKSSEEL---KNSQEFETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
PI +I +R +L +LIGF G PWTVASY+I GG K + F S
Sbjct: 118 TFPILNAIRKVRSQLSEEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLHFC---SLELEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ K+P+
Sbjct: 175 VIKKITEATIIYLIKQIEFGADVIQLFDSNAGILQGELFERYVIKPTKEIVSAIKNKFPD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A + + P+QGNL+P L
Sbjct: 235 FPIIGFPRSAGNLYKDYYEKTGVSAVSIDYNVPIEWA-KANLKIPLQGNLNPSLLAYNKA 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ I+D PFIFNLGHG+ P +N+ LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENIAALVDLVRN 337
>gi|91206244|ref|YP_538599.1| uroporphyrinogen decarboxylase [Rickettsia bellii RML369-C]
gi|122425099|sp|Q1RGK4|DCUP_RICBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91069788|gb|ABE05510.1| Uroporphyrinogen decarboxylase [Rickettsia bellii RML369-C]
Length = 340
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 204/327 (62%), Gaps = 4/327 (1%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PPIWLMRQAGRYL EY +RK+ KNFL+ CY + E+TLQPI+R+ FDAAI+FSDI
Sbjct: 13 NKPPIWLMRQAGRYLSEYMAVRKEVKNFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSISILRKKLPN 136
LV+ ALG V F EN GP + ++E + L N + + L +++ + +RK+LP
Sbjct: 73 LVLPHALGWEVDFKENIGPLLKQFKSKEDFKYLQDNSN---DKLEKVYEIVKKVRKELPK 129
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+LIGF G+PWTV +YM+ G +D ++ F Y+N LL+F+++ + +LI QI
Sbjct: 130 STSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQI 189
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+G ++I+IFD+ AG L E EF+ + +II +++ +P+ I+F KGAG + + +
Sbjct: 190 KSGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKF 249
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
++ I +D +PL + VQGNLDP+ L+ +++ + ++ IL ++ +
Sbjct: 250 LEEVPTDIIAIDPLIPLEKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKN 309
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
FIFNLGHGI P+ P+NV LVK +R
Sbjct: 310 FIFNLGHGILPETPPENVEFLVKCIRE 336
>gi|296114267|ref|ZP_06832921.1| uroporphyrinogen decarboxylase [Gluconacetobacter hansenii ATCC
23769]
gi|295979028|gb|EFG85752.1| uroporphyrinogen decarboxylase [Gluconacetobacter hansenii ATCC
23769]
Length = 353
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 201/353 (56%), Gaps = 13/353 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E + +L L G I PPP+WLMRQAGR+LPE+R +R+K +F+ C TP+ E+TL
Sbjct: 1 MTETGKPLLRALAGEAIWPPPVWLMRQAGRFLPEFRALREK-ADFITRCMTPDMATEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ D AILFSDIL++ A+G+++ F+ GP ++P+ + L ++
Sbjct: 60 QPIRRFGMDGAILFSDILILPWAMGQSLEFIHGRGPVLEPVRSLH-DLERLDVKRVEAAT 118
Query: 121 LPIFQSISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+P+ +++ LR + P +TLIGF GAP+TVA YM+ G ++ R A
Sbjct: 119 MPVMETLQRLRTIVDGPDPIGVAKPGQVTLIGFAGAPFTVACYMVEGHGSREFDVTRGLA 178
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + F+ L+D L+ +A+ L QI AG + + +FD+ AG L EF + RI+
Sbjct: 179 YSDPEFFDRLIDILTIATADMLCNQIVAGAEAVMLFDSWAGLLPPSEFRRHVIAPAQRIV 238
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNL 289
+ ++P I F + AG M Y R T NA+ LD S + + A +L +QGNL
Sbjct: 239 KIINERHPGVPIIGFPRLAGLMAVEYGRETGVNAMALDTSADMKAIAEQLPNTLTLQGNL 298
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP+R++ G + M AI D + P IFNLGHG+ P P++V DL+ T+R
Sbjct: 299 DPLRVLAGGEGMRAEARAIRDAMKGRPHIFNLGHGVVPATPPEHVGDLIATIR 351
>gi|326404939|ref|YP_004285021.1| uroporphyrinogen decarboxylase [Acidiphilium multivorum AIU301]
gi|325051801|dbj|BAJ82139.1| uroporphyrinogen decarboxylase [Acidiphilium multivorum AIU301]
Length = 358
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 199/345 (57%), Gaps = 6/345 (1%)
Query: 2 NERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+R +K +L VL G + PPP+WLMRQAGRYLPEYR++R+K NF+ +C TP E+TL
Sbjct: 3 GQRAEKPVLRVLGGEAVWPPPVWLMRQAGRYLPEYRKLREKAGNFIALCTTPPLATEVTL 62
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNY 119
QP+RR+ DAAILFSDIL++ ALG+ +RF E EGPR++ I + L+P
Sbjct: 63 QPVRRFGMDAAILFSDILILPWALGQKLRFAEGEGPRLERIDGLAGLEALDPAA--LRQG 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
P+ +++S +R +LP TLIGF G+P+TVA YMI G D R AY +
Sbjct: 121 TEPVMETVSRVRAELPPETTLIGFAGSPFTVACYMIDGRG-GDFPLTREVAYADPALLAA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ ++ + +YL QI AG D + +FD+ AG L F + RI+ +R ++P
Sbjct: 180 VIETVTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLRVRHPG 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
K I F + G M Y T +A+G+D SV P++ A + QGNLDP+ L G
Sbjct: 240 VKVIGFPRLGGLMTLPYIADTGVDAVGMDTSVDPVALARLAPRRVAFQGNLDPLLLRAGG 299
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V I L P IFNLGHGI P P++V +++ +RS
Sbjct: 300 ISLGQAVERIARGLAGHPHIFNLGHGIVPDTPPEHVAAVIERLRS 344
>gi|189183422|ref|YP_001937207.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str. Ikeda]
gi|238056491|sp|B3CR66|DCUP_ORITI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189180193|dbj|BAG39973.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str. Ikeda]
Length = 342
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 207/345 (60%), Gaps = 18/345 (5%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
KI++ + N PIW MRQAGRYLPEY+ +RK +F ++CY P E+TLQPI R+
Sbjct: 3 KIIQAFNSSNRNYTPIWFMRQAGRYLPEYQMLRKTTNSFFELCYDPIKAAEVTLQPIARF 62
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT----QEIYLLNPNIDLFLNYLLP 122
+FDAAI+FSDILV+ D+LG N+RF+ N GP + I Q++ + N I
Sbjct: 63 DFDAAIIFSDILVLPDSLGINIRFINNLGPTAEKIPNLLDLQKLKIQNTKIS-------K 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++++I I+RKKL +LIGFCG PWTV +Y++ G+ + +++ +LD
Sbjct: 116 VYEAIDIVRKKLNKQKSLIGFCGGPWTVLTYIL--GY-NSRNTPKFQEIKSNNKHELILD 172
Query: 183 ---FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ + ++L QI AG D++QIFD+ AG L EF Y + I+ ++ K+P+
Sbjct: 173 SINILTKHTIDHLENQILAGADIVQIFDSWAGILPYQEFSEYVIKPTSNIVKTLKEKFPH 232
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
K I F KGAG + Y + T+ + I D+++PL+ L+LQK VQGNL+P ++ +
Sbjct: 233 IKIIGFPKGAGKLYHKYTKETNVDGISCDYNLPLNEMLKLQKNALVQGNLNPNTILSEDS 292
Query: 300 VMI-DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I + V I+D L + FIFNLGHGI P+ KNV +VK V++
Sbjct: 293 KIIEESVIKIMDTLSNNRFIFNLGHGILPETPIKNVELIVKLVKN 337
>gi|148261459|ref|YP_001235586.1| uroporphyrinogen decarboxylase [Acidiphilium cryptum JF-5]
gi|172047779|sp|A5G1D5|DCUP_ACICJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146403140|gb|ABQ31667.1| uroporphyrinogen decarboxylase [Acidiphilium cryptum JF-5]
Length = 358
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 199/345 (57%), Gaps = 6/345 (1%)
Query: 2 NERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+R +K +L VL G + PPP+WLMRQAGRYLPEYR++R+K NF+ +C TP E+TL
Sbjct: 3 GQRAEKPVLRVLGGEAVWPPPVWLMRQAGRYLPEYRKLREKAGNFIALCTTPPLATEVTL 62
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNY 119
QP+RR+ DAAILFSDIL++ ALG+ +RF E EGPR++ I + L+P
Sbjct: 63 QPVRRFGMDAAILFSDILILPWALGQKLRFAEGEGPRLERIDGLAGLEALDPAA--LRQG 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
P+ +++S +R +LP TLIGF G+P+TVA YMI G D R AY +
Sbjct: 121 TEPVMETVSRVRAELPPETTLIGFAGSPFTVACYMIDGRG-GDFPLTREVAYADPALLAA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ ++ + +YL QI AG D + +FD+ AG L F + RI+ +R ++P
Sbjct: 180 VIETVTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLRVRHPG 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
K I F + G M Y T +A+G+D SV P++ A + QGNLDP+ L G
Sbjct: 240 VKVIGFPRLGGLMTLPYIADTGVDAVGMDTSVDPVALARLAPRRVAFQGNLDPLLLRAGG 299
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V I L P IFNLGHGI P P++V +++ +RS
Sbjct: 300 ISLGQAVERIARGLEGHPHIFNLGHGIVPDTPPEHVAAVIERLRS 344
>gi|222475640|ref|YP_002564057.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Florida]
gi|255003633|ref|ZP_05278597.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Puerto Rico]
gi|222419778|gb|ACM49801.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Florida]
Length = 346
Score = 254 bits (650), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 196/327 (59%), Gaps = 13/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY ++ F+NFLD CYTPE E+TLQP++R++ DAAI+FSDI+V+
Sbjct: 25 PIWFMRQAGRYLPEYHKVMDNFQNFLDACYTPEVVEEITLQPVKRFDIDAAIIFSDIMVV 84
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F+ +GP++ I Q Y +I L P+F+ I +RK L + TL
Sbjct: 85 LDALGYEVSFIRGQGPKIGNIIHQ--YSTTESI----AKLQPVFEGIRKVRKSLDSDKTL 138
Query: 141 IGFCGAPWTVASYMI--SGGFI---KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
IGF G+PWT+ +Y++ F+ KD V + ++ L++ ++D+++ YL Q
Sbjct: 139 IGFAGSPWTLLTYVLGKENNFLKIRKDICLETVHKHTKNKVTE-LVNRITDLTSHYLAKQ 197
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I +GVDVIQ+FD+ A L FE Y +I+ VR ++PN I F GAG M K
Sbjct: 198 IESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFVRVRHPNFPIIGFPMGAGVMYKT 257
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
Y T +AI +D+S+P S+ E +G +QGNLDP L + I++ LG
Sbjct: 258 YLEKTGISAISVDYSIPTSWIKE-HLDGVIQGNLDPSLLAYNQKASDSQSMKIVEELGDK 316
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P IFNLGHGI P+ ++V L+++VR
Sbjct: 317 PLIFNLGHGILPETPIQHVESLIRSVR 343
>gi|330991369|ref|ZP_08315320.1| Uroporphyrinogen decarboxylase [Gluconacetobacter sp. SXCC-1]
gi|329761388|gb|EGG77881.1| Uroporphyrinogen decarboxylase [Gluconacetobacter sp. SXCC-1]
Length = 353
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 204/355 (57%), Gaps = 15/355 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++ +L L G PPP+WLMRQAGR+LPE+R +R+K +F+ C TP+ V++TL
Sbjct: 1 MTETRKPLLATLLGEATWPPPVWLMRQAGRFLPEFRALREK-ADFITRCMTPDMAVDITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNY 119
QPIRR+ D AILFSDIL++ A+G+++ FV GP + P+ + ++ L+P
Sbjct: 60 QPIRRFGMDGAILFSDILILPWAMGQSLEFVHGRGPVLGPVRSMADLERLDPT--RVAKA 117
Query: 120 LLPIFQSISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ P+ ++++ LRK + P +TLIGF GAP+TVA YM+ G ++ + R
Sbjct: 118 VQPVMETLARLRKTVDGPEAIGPARPGQVTLIGFAGAPFTVACYMVEGHGSREFEETRRL 177
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
AY + F+ L+D L+ +A+ L AQI AG + + +FD+ +G L +F + RI
Sbjct: 178 AYTDPAFFDRLIDLLTTSTADMLCAQIEAGAEAVMLFDSWSGLLPPSQFRQHVIEPARRI 237
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGN 288
+ ++P I F + G M Y T NA+ LD ++ A ++ +QGN
Sbjct: 238 TEIINARHPGVPVIGFPRLGGLMAIEYGHKTGVNAMALDTGADMMAVAEKVPDTLVLQGN 297
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LDP+R++ G + M AI D + P +FNLGHG+ P P++V DL++T+R
Sbjct: 298 LDPIRVLAGGEGMRIEARAIRDAMKGRPHVFNLGHGVIPSTPPEHVGDLIRTIRE 352
>gi|157804282|ref|YP_001492831.1| uroporphyrinogen decarboxylase [Rickettsia canadensis str. McKiel]
gi|166234282|sp|A8F0B3|DCUP_RICCK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157785545|gb|ABV74046.1| uroporphyrinogen decarboxylase [Rickettsia canadensis str. McKiel]
Length = 339
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 206/341 (60%), Gaps = 5/341 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L+GN + P+W MRQAGRYLPEY++IR+ KNFLD CY E+TLQPIRR
Sbjct: 2 KQLLNPLKGNS-DKIPVWFMRQAGRYLPEYKKIRETIKNFLDFCYDVNKATEVTLQPIRR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIF 124
Y+FDAAI+FSDILV+ ALG V F EN GP + +QE + L + + N L ++
Sbjct: 61 YHFDAAIIFSDILVLPHALGWEVDFKENIGPILRQFRSQEDFKYLQSDTN---NKLEKVY 117
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+FL
Sbjct: 118 KIIKKVKKELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFVYENKALSKELLNFL 177
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + +LI Q+ +G +++++FD+ +G L E EF + +II V+ P I+
Sbjct: 178 IDKTTYHLINQVESGANILKLFDSCSGVLAEEEFTEFVIEPTKKIILKVKEVLPKTPIIA 237
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + + + + + + +D +PL E + VQGNLDP+ L+ +++ +
Sbjct: 238 FPKGAGLLYEKFIKEVPIDILAVDQMIPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIKEK 297
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL V+ FIFNLGHGI P+ +NV L + VRS K
Sbjct: 298 AYEILQVMEGKNFIFNLGHGILPETPIENVEFLTEYVRSFK 338
>gi|58584262|ref|YP_197835.1| uroporphyrinogen-III decarboxylase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|75508022|sp|Q5GTT1|DCUP_WOLTR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58418578|gb|AAW70593.1| Uroporphyrinogen-III decarboxylase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 347
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 200/339 (58%), Gaps = 10/339 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ I E QG I PIWLMRQAGR LPEYR+ K +F+++CY + VELTLQP+ R
Sbjct: 19 KTIKEGKQGRKI---PIWLMRQAGRSLPEYRRAVKDTSSFMEICYNTDLVVELTLQPVAR 75
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
++ DAAI+FSDIL++AD LG +V F+ GP + P+ + L NP LPI
Sbjct: 76 FSMDAAIIFSDILIVADVLGCDVDFIRGVGPTIKPVKNFK-ELRNPQ--KIETKTLPILN 132
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +R KLP +LIGF G PWTVASY+I G K ++V S + +++ ++
Sbjct: 133 AIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTF--SKVLNLHPS-SLEQIIEQIT 189
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+V+ YL+ QI G DVIQ+FD++AG L FE + +I+SA++ K+P+ I F
Sbjct: 190 EVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPDFPIIGF 249
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
K AG + K+Y T +A+ +D++VP+ +A E K P+QGNL+P L I
Sbjct: 250 PKSAGSLYKDYCEKTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKMEAIKET 308
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+D PFIFNLGHG+ P +N+ LV V+S+
Sbjct: 309 KRIIDCFRDLPFIFNLGHGVLPNTPIENIAALVDLVKSQ 347
>gi|157826384|ref|YP_001494104.1| uroporphyrinogen decarboxylase [Rickettsia akari str. Hartford]
gi|166234280|sp|A8GQC1|DCUP_RICAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157800342|gb|ABV75596.1| uroporphyrinogen decarboxylase [Rickettsia akari str. Hartford]
Length = 338
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/335 (39%), Positives = 197/335 (58%), Gaps = 9/335 (2%)
Query: 12 LQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAA 71
L+GN N PIW MRQAGRYL EY+++R+ KNFLD CY E+TLQPI+RY FDAA
Sbjct: 8 LKGNN-NKIPIWFMRQAGRYLSEYKKVRETTKNFLDFCYDVNKATEVTLQPIKRYGFDAA 66
Query: 72 ILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLL---NPNIDLFLNYLLPIFQSIS 128
I+FSDILV+ A G + F EN GP + +QE + NPN N L +++ I
Sbjct: 67 IIFSDILVLPHAFGWEIDFKENIGPILKQFKSQEDFKYLQSNPN-----NKLGKVYEIIK 121
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
++ L + +LIGF G+PWTV SYM+ G D ++ F Y+N LL+F+++ +
Sbjct: 122 KVKADLTSTTSLIGFAGSPWTVMSYMLEGKGKHDFKTSKKFIYENKILAKELLNFITEKT 181
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P I+F KG
Sbjct: 182 ADHLINQAKSGADVLKLFDSWSGVLPEDEFTKFVIEPTKKIILKVKEVFPKIPMIAFPKG 241
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
AG + + + + + + +D VPL + + VQGNLDP+ L+ +++ + I
Sbjct: 242 AGLLYEKFIKEVPVDILAVDQMVPLEKMKKWSDKVIVQGNLDPVVLLTNKEIIKEKAYKI 301
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + FIFNLGHGI P+ P+NV L + +RS
Sbjct: 302 IQEMKGKNFIFNLGHGILPKTPPENVEFLTECIRS 336
>gi|15604713|ref|NP_221231.1| uroporphyrinogen decarboxylase [Rickettsia prowazekii str. Madrid
E]
gi|6225244|sp|Q9ZC83|DCUP_RICPR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3861408|emb|CAA15307.1| UROPORPHYRINOGEN DECARBOXYLASE (hemE) [Rickettsia prowazekii]
gi|292572550|gb|ADE30465.1| Uroporphyrinogen decarboxylase [Rickettsia prowazekii Rp22]
Length = 345
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 199/326 (61%), Gaps = 4/326 (1%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPIRRY DAAI+FSDI
Sbjct: 12 NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQPIRRYGLDAAIIFSDI 71
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIY-LLNPNIDLFLNYLLPIFQSISILRKKLPN 136
LV+ +ALG V F EN GP + +Q+ + L + + N L +++ I +++KLP+
Sbjct: 72 LVLPNALGWEVDFKENIGPVLKQFKSQKDFQYLQRDSN---NKLEKVYKIIKKVKEKLPS 128
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F+++ +++YLI Q+
Sbjct: 129 NTSLIGFAGSPWTVMSYMLEGKGKRDFRTSKKFIYENKILAKDLLNFITEKTSDYLINQV 188
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+GVD+++IFD+ +G L E +F + +II V+ + I+F KGAG + + +
Sbjct: 189 KSGVDLLKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFVKTPIITFPKGAGLLYEKF 248
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ + +D VPL E + +QGNLDP+ L+ +++ + IL +
Sbjct: 249 IEEVPIDILAVDQMVPLEKMKEWSNKVIIQGNLDPVILLTNKEIIKEKTYKILQAMKGKN 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVR 342
FIFNLGHGI P+ P+NV L + VR
Sbjct: 309 FIFNLGHGILPETHPENVEFLTQYVR 334
>gi|225677443|ref|ZP_03788408.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590521|gb|EEH11783.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 338
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 191/323 (59%), Gaps = 7/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGR LPEYR+ K NF+++CY + ELTLQP+ R++ DAAI+FSDIL+I
Sbjct: 22 PIWLMRQAGRSLPEYRKAVKNMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILII 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
AD LG NV FV GP + P+ + + I+ LPI +I +R +LP +L
Sbjct: 82 ADVLGCNVNFVRGVGPIIKPVESPKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSL 138
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVASY+I GG K ++V + S +++ +++V+ YLI QI G
Sbjct: 139 IGFAGGPWTVASYIIEGGSSKTF--SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DVIQ+FD++AG L E F+ Y RII A++ ++ + I F + AG + K+Y T
Sbjct: 196 DVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQT 255
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+ +D++VP+ +A + P+QGNLDP L I I+D PFIFN
Sbjct: 256 GVSAVSIDYNVPIKWA-KANLNIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFN 314
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P +N+ LV V+S
Sbjct: 315 LGHGVLPDTPVENIAALVNLVKS 337
>gi|95113918|gb|ABF55509.1| HemE [Wolbachia endosymbiont of Drosophila mauritiana]
Length = 338
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 197/344 (57%), Gaps = 8/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPP-PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K KI ++ N + PIWLMRQAGR LPEYR+ + NF+++CY+ + ELT
Sbjct: 1 MKRSKAKIARIISQNESDEKVPIWLMRQAGRSLPEYRKAVENMNNFMEICYSTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI R++ DAAI+FSDIL+IAD LG NV F+ GP + PI + + I+ +
Sbjct: 61 LQPITRFDMDAAIIFSDILIIADILGCNVNFIRGVGPIIRPIESAKDLKSLQGIE---SN 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTV SY+I GG K + F A
Sbjct: 118 TLPILNAIKEVRSQLPEEKSLIGFAGGPWTVGSYIIEGGSSKTFSKVLNFC---PLALEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ ++PN
Sbjct: 175 IIKKITEATIIYLIKQIEFGADVIQLFDSNAGVLKGKLFERYIIKPTKEIVSAIKSRFPN 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + A + +Y T +A+ +D++VP+ +A E K P+QGNL+P L
Sbjct: 235 FPIIGFPRSAENLYTDYCEQTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKS 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ I+D PFIFNLGHG+ P +NV LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENVAALVDLVRN 337
>gi|162147010|ref|YP_001601471.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544073|ref|YP_002276302.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|229889832|sp|A9HDX7|DCUP_GLUDA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161785587|emb|CAP55158.1| Uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531750|gb|ACI51687.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 353
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 201/355 (56%), Gaps = 15/355 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + +L VLQG + PPPIWLMRQAGRYLPE+R +R + +F+ C TP+ E+TL
Sbjct: 1 MTDTGKPLLRVLQGEAVWPPPIWLMRQAGRYLPEFRALRDQ-ADFITRCMTPDLATEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNY 119
QPIRRY D AILFSDIL++ A+G+++ FV +GP + I ++ ++ L+P +
Sbjct: 60 QPIRRYAMDGAILFSDILILPWAMGQSLDFVAGKGPILGAIRSEADLARLDPK--RVPDA 117
Query: 120 LLPIFQSISILRKKL--PN--------HITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P+ +++S LR L P+ +TL+GF GAP+TVA YM+ G ++ R
Sbjct: 118 TAPVMETLSRLRAILDGPDPIGAAQGGRVTLLGFAGAPFTVACYMVEGHGSREFDATRGM 177
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
AY + F+ L+ L+ +A+ L+AQI AG + + +FD+ +G L +F + I
Sbjct: 178 AYSDPLLFDRLMATLTQATADMLVAQIDAGAEAVMLFDSWSGLLPPAQFRRHVIAPTRAI 237
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGN 288
+ ++ + P I F + AG M Y R T + LD ++ L G VQGN
Sbjct: 238 VQEIQARRPGVPVIGFPRLAGIMAAEYARETGLRVMALDTGADMAAMAGLLPPGMTVQGN 297
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LDP+ L+ G M AI D + P +FNLGHG+ P P++V DLV+TVR
Sbjct: 298 LDPLLLLAGGDAMAQEARAIRDAMKGRPHVFNLGHGVVPPTPPEHVGDLVRTVRE 352
>gi|95113915|gb|ABF55507.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|95113921|gb|ABF55511.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
Length = 338
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 197/344 (57%), Gaps = 8/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPP-PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K KI ++ N + PIWLMRQAGR LPEYR+ + NF+++CY+ + ELT
Sbjct: 1 MKRSKAKIARIISQNESDEKVPIWLMRQAGRSLPEYRKAVENMNNFMEICYSTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI R++ DAAI+FSDIL+IAD LG NV F+ GP + PI + + I+ +
Sbjct: 61 LQPITRFDMDAAIIFSDILIIADILGCNVNFIRGVGPIIRPIESAKDLKSLQGIE---SN 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTV SY+I GG K + F A
Sbjct: 118 TLPILNAIKEVRSQLPEEKSLIGFAGGPWTVGSYIIEGGSSKTFSKVLNFC---PLALEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ ++PN
Sbjct: 175 IIKKITEATIIYLIKQIEFGADVIQLFDSNAGVLKGKLFERYIIKPTKEIVSAIKSRFPN 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + A + +Y T +A+ +D++VP+ +A E K P+QGNL+P L
Sbjct: 235 FPIIGFPRSAENLYTDYCEQTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKS 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ I+D PFIFNLGHG+ P +N+ LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENIAALVDLVRN 337
>gi|258543718|ref|YP_003189151.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01]
gi|256634796|dbj|BAI00772.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01]
gi|256637852|dbj|BAI03821.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-03]
gi|256640906|dbj|BAI06868.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-07]
gi|256643961|dbj|BAI09916.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-22]
gi|256647016|dbj|BAI12964.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-26]
gi|256650069|dbj|BAI16010.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-32]
gi|256653059|dbj|BAI18993.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656113|dbj|BAI22040.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-12]
Length = 359
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 200/350 (57%), Gaps = 15/350 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L G + PPP+WLMRQAGR+LPE+R +R K +FL C TP+ ELTLQPI+R
Sbjct: 11 KRLLRTLNGEALWPPPMWLMRQAGRFLPEFRAMRAK-ADFLTRCMTPDIATELTLQPIKR 69
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ D AILFSDIL++ A+G+++ FVE +GP + I + Q++ L+P P+
Sbjct: 70 FGMDGAILFSDILILPWAMGQSLEFVEGKGPVLGAIRSEQDLAKLDPA--RIAEVTAPVL 127
Query: 125 QSISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
++++ LR +L P TL+GF GAP+TVA YM+ G ++ R AY
Sbjct: 128 ETLTRLRTELNGPDKIGVAQPGATTLLGFTGAPFTVACYMVEGHGSREFAITRQMAYAEP 187
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
F+ L+D L+ +AEYL QI AG + + +FD+ AG L EF + +I+ ++
Sbjct: 188 VLFDRLMDLLTQTTAEYLCKQIEAGAEAVMLFDSWAGLLSPSEFRKHVIAPSRQIVQTIK 247
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMR 293
++P+ + I F + +G ++ Y R TD + + LD + + E +QGNLDP+
Sbjct: 248 ARHPSTRIIGFPRLSGVLVAEYARETDVDVVALDTGADIKIVRSMVPEHIGIQGNLDPVA 307
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ G + M AI + +FNLGHG+ PQ ++V +LV T+R
Sbjct: 308 VLAGGEAMKREALAIREAGRGRAHVFNLGHGVLPQTPVEHVAELVSTIRE 357
>gi|307610754|emb|CBX00361.1| uroporphyrinogen decarboxylase [Legionella pneumophila 130b]
Length = 352
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 204/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 10 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLRRYAL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L P+I L+Y +F
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSY---VFD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL L+
Sbjct: 127 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLSKLA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 187 ASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 247 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRSE 305
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 306 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|172045952|sp|Q5ZTY0|DCUP_LEGPH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 352
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 205/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 10 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLRRYAL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L P+I L+Y +F
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSY---VFD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+ L+
Sbjct: 127 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNKLA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 187 VSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 247 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRSE 305
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 306 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|52842245|ref|YP_096044.1| uroporphyrinogen decarboxylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629356|gb|AAU28097.1| uroporphyrinogen decarboxylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 353
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 205/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 11 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLRRYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L P+I L+Y +F
Sbjct: 71 DAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSY---VFD 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+ L+
Sbjct: 128 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNKLA 187
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 188 VSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 247
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 248 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRSE 306
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 307 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 346
>gi|270159350|ref|ZP_06188006.1| uroporphyrinogen decarboxylase [Legionella longbeachae D-4968]
gi|289165830|ref|YP_003455968.1| Uroporphyrinogen decarboxylase [Legionella longbeachae NSW150]
gi|269987689|gb|EEZ93944.1| uroporphyrinogen decarboxylase [Legionella longbeachae D-4968]
gi|288859003|emb|CBJ12931.1| Uroporphyrinogen decarboxylase [Legionella longbeachae NSW150]
Length = 351
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 196/326 (60%), Gaps = 6/326 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYRQ R + +FL +C PE E+TLQP+RRY+ DAAILFSDIL I
Sbjct: 22 PVWMMRQAGRYLPEYRQTRAQAGDFLSLCKNPELACEVTLQPLRRYSLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DA+G + F E EGP + PI QEI + L+ L + ++ ++RK++P +
Sbjct: 82 PDAMGLGLYFAEGEGPCFERPI--QEIQAITNLQVPDLDSLAYVMNAVRLIRKEMPKELP 139
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A YM+ G +D + Y NS A + LL+ L+ A+YL QI+AG
Sbjct: 140 LIGFAGSPWTLACYMVEGRSSRDFKRILHLIYTNSEAAHLLLNKLALSVADYLCEQINAG 199
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V+ + +FDT G L ++N++ + +I+ ++ P+ I F KG G L+ +
Sbjct: 200 VNAVMLFDTWGGILTPENYQNFSLHYMQQIVQQIKNHAPDVPVILFTKGGGQWLEKM-LV 258
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
T +A+G+DW+ LS A + + +QGNLDP L+ Q + + V +L G G
Sbjct: 259 TGCDALGIDWTCDLSDARRRVGDKVALQGNLDPSVLLTSKQCIHEQVKKVLASFGHGSGH 318
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGITP V P++V +++ V
Sbjct: 319 VFNLGHGITPDVPPEHVAAMIEAVHE 344
>gi|172045961|sp|Q5WV12|DCUP_LEGPL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 352
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 204/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 10 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREYAGDFLNLCKNPELACEVTLQPLRRYAL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L P+I L+Y +F
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSY---VFD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL L+
Sbjct: 127 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLSKLA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 187 ASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 247 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRSE 305
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 306 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|149185260|ref|ZP_01863577.1| uroporphyrinogen decarboxylase [Erythrobacter sp. SD-21]
gi|148831371|gb|EDL49805.1| uroporphyrinogen decarboxylase [Erythrobacter sp. SD-21]
Length = 320
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 192/323 (59%), Gaps = 10/323 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R + FL M Y E E+TLQPI R+ FD AILFSDIL++ AL
Sbjct: 1 MRQAGRYLPEYRELRAQKGGFLAMAYDSEAACEITLQPIDRFGFDGAILFSDILIVPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL---NYLLPIFQSISILRKKLPNHITLI 141
G+N+ F+ EGP++ P L++ +++ PI++++ + R++LP +T++
Sbjct: 61 GQNLEFLAGEGPKLSP------RLVDASLESLTRAPERYEPIYETVRLCRQRLPEGVTML 114
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWTVA+YM++G +D + R AY++ ++D +++ + YL QI AG +
Sbjct: 115 GFAGSPWTVATYMVAGEGSRDQHEARALAYRDPGELQAIIDTIAEQTITYLSGQIEAGAE 174
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L +EFE + RI++A+ +P+ I F KG+G L Y R T
Sbjct: 175 AVQLFDSWAGSLAPNEFERWVIAPNARIVAALAELHPDTPVIGFPKGSGEKLPVYARETG 234
Query: 262 SNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
A+G+D ++ P A +L VQGNLDP+ L+ G+ + V IL+ P +FN
Sbjct: 235 VKAVGVDETLDPAWVARQLPAGMAVQGNLDPLLLLAGSDQLEKRVQTILEAFADRPHVFN 294
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHGI + +V L+ VR
Sbjct: 295 LGHGIDRRTPIAHVERLIAAVRG 317
>gi|54294926|ref|YP_127341.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Lens]
gi|53754758|emb|CAH16245.1| Uroporphyrinogen decarboxylase [Legionella pneumophila str. Lens]
Length = 353
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 204/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 11 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREYAGDFLNLCKNPELACEVTLQPLRRYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L P+I L+Y +F
Sbjct: 71 DAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLKIPSIPESLSY---VFD 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL L+
Sbjct: 128 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLSKLA 187
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 188 ASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 247
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 248 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRSE 306
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 307 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 346
>gi|225630691|ref|YP_002727482.1| uroporphyrinogen decarboxylase [Wolbachia sp. wRi]
gi|254767710|sp|C0R449|DCUP_WOLWR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|95113894|gb|ABF55493.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|225592672|gb|ACN95691.1| uroporphyrinogen decarboxylase [Wolbachia sp. wRi]
Length = 338
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 191/323 (59%), Gaps = 7/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGR LPEYR+ + NF+++CY + ELTLQP+ R++ DAAI+FSDIL+I
Sbjct: 22 PIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILII 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
AD LG +V FV GP + P+ + + I+ LPI +I +R +LP +L
Sbjct: 82 ADVLGCDVNFVRGVGPIIKPVESPKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSL 138
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVASY+I GG K ++V + S +++ +++V+ YLI QI G
Sbjct: 139 IGFAGGPWTVASYIIEGGSSKTF--SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DVIQ+FD++AG L E F+ Y RII A++ ++ + I F + AG + K+Y T
Sbjct: 196 DVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQT 255
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+ +D++VP+ +A + P+QGNLDP L I I+D PFIFN
Sbjct: 256 GVSAVSIDYNVPIKWA-KANLNIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFN 314
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P +N+ LV V+S
Sbjct: 315 LGHGVLPDTPVENIAALVNLVKS 337
>gi|114800363|ref|YP_762239.1| uroporphyrinogen decarboxylase [Hyphomonas neptunium ATCC 15444]
gi|123027535|sp|Q0BWA4|DCUP_HYPNA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114740537|gb|ABI78662.1| uroporphyrinogen decarboxylase [Hyphomonas neptunium ATCC 15444]
Length = 344
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 197/345 (57%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K+L L G V PP+W+MRQAGR+LPEY + R + K+FLD CYTP E TL
Sbjct: 1 MATSVKKLLAGLSGEVFKVPPVWMMRQAGRHLPEYLETRARSKDFLDFCYTPSLASEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-TQEIYLLNPNIDLFLNY 119
QPIRRY D AILF+DIL+I DA+G V F + EGP ++ I ++ ++P +
Sbjct: 61 QPIRRYGMDGAILFADILLILDAMGLKVAFEKGEGPLVEQINGPSDLARVSPQKA--ADR 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+++++S ++ LP TLIGF G+PWTV+ Y I G D +A+
Sbjct: 119 LSPVYETVSRVKAALPAQTTLIGFAGSPWTVSLYAIEGRGKTDKSTAWRWAHGRPDDLAA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++D +++ +AEYL Q+ AG + + +FD+ A L ++ F ++++ +R +
Sbjct: 179 VMDLVAEATAEYLARQVEAGAEALMLFDSWAEGLPDNIFREVVIAPTRKLVALLRERGIT 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F +GAG ML Y R T A+GLD + +F EL K PVQG+LDP+ L+ G
Sbjct: 239 VPIIGFPRGAGVMLPEYVRETGVTAVGLDTAASPAFINAELAKGFPVQGHLDPLLLIEGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +LD P IFNLGHG+ P+ +V +++ +R+
Sbjct: 299 ARLDARVRELLDAYRGRPHIFNLGHGVRPETPIAHVERVLELIRN 343
>gi|329114718|ref|ZP_08243475.1| Uroporphyrinogen decarboxylase [Acetobacter pomorum DM001]
gi|326695849|gb|EGE47533.1| Uroporphyrinogen decarboxylase [Acetobacter pomorum DM001]
Length = 434
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 200/349 (57%), Gaps = 15/349 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L G + PPP+WLMRQAGR+LPE+R +R K +FL C TP+ ELTLQPI+R
Sbjct: 86 KRLLRTLNGEALWPPPMWLMRQAGRFLPEFRAMRAK-ADFLTRCMTPDIATELTLQPIKR 144
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ D AILFSDIL++ A+G+++ FVE +GP + I + Q++ L+P P+
Sbjct: 145 FGMDGAILFSDILILPWAMGQSLEFVEGKGPILGAIRSEQDLAKLDPA--RIAEITAPVL 202
Query: 125 QSISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
++++ LRK+L P TL+GF GAP+TVA YM+ G ++ R AY
Sbjct: 203 ETLTRLRKELNGPDKIGVAQPGATTLLGFTGAPFTVACYMVEGHGSREFAVTRQMAYAEP 262
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
F+ L+D L+ +AEYL QI AG + + +FD+ AG L EF + +I+ A++
Sbjct: 263 VLFDRLMDLLTRTTAEYLCKQIEAGAEAVMLFDSWAGLLSPSEFRKHVIAPSRQIVQAIK 322
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMR 293
++P+ + I F + +G ++ Y R T + + LD + + E +QGNLDP+
Sbjct: 323 ARHPSTRIIGFPRLSGVLVAEYARETGVDVVALDTGADIEIVRSMLPEHVGIQGNLDPVS 382
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ G M AI + +FNLGHG+ PQ ++V +LV T+R
Sbjct: 383 VLAGGDAMKREALAIREAGRGRAHVFNLGHGVLPQTPVEHVAELVNTIR 431
>gi|269958334|ref|YP_003328121.1| uroporphyrinogen decarboxylase [Anaplasma centrale str. Israel]
gi|269848163|gb|ACZ48807.1| uroporphyrinogen decarboxylase [Anaplasma centrale str. Israel]
Length = 346
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/335 (40%), Positives = 194/335 (57%), Gaps = 29/335 (8%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY ++ F+NFLD CYTPE ++TLQP++R++ DAAI+FSDI+V+
Sbjct: 25 PIWFMRQAGRYLPEYHEVMNNFENFLDACYTPEVVEKITLQPVKRFDIDAAIIFSDIMVV 84
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
D+LG V F+ +GP++ + Q Y ++ +I L P+F+ I +RK L TL
Sbjct: 85 LDSLGYEVNFMRGQGPQIGKVIHQ--YSISESI----TKLQPVFEGIRRVRKSLDIDKTL 138
Query: 141 IGFCGAPWTVASYMI--SGGFIK-----------DHGQNRVFAYQNSRAFNWLLDFLSDV 187
IGF G+PWT+ +Y + F K H +N++ L++ ++D+
Sbjct: 139 IGFAGSPWTLLTYALGKEKNFFKIRKDICLETAHKHPENKI---------TELVNRITDL 189
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
++ YL QI +GVDVIQ+FD+ A L FE Y +I+ VR ++PN I F
Sbjct: 190 TSHYLAKQIESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFVRVRHPNFPIIGFPM 249
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
GAG M K Y T +AI +D+S+P S+ E G +QGNLDP L +
Sbjct: 250 GAGVMYKTYLEKTGISAISVDYSIPTSWIKE-HLNGVIQGNLDPSLLAYNQKASDSKSIK 308
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I++ LG P IFNLGHGI P+ ++V L+++VR
Sbjct: 309 IVEELGDKPLIFNLGHGILPETPIQHVESLIRSVR 343
>gi|296533540|ref|ZP_06896111.1| uroporphyrinogen decarboxylase [Roseomonas cervicalis ATCC 49957]
gi|296266133|gb|EFH12187.1| uroporphyrinogen decarboxylase [Roseomonas cervicalis ATCC 49957]
Length = 347
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 192/347 (55%), Gaps = 7/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L L G + PPP WLMRQAGRYLPEYR++R + +F+ +C P E+TL
Sbjct: 1 MENASKPLLRALSGEALWPPPFWLMRQAGRYLPEYRELRAQAGDFISLCTNPALAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNY 119
QP+RRY D AILFSDIL++ A+G+ +R+ E EGP +DPI E + L P
Sbjct: 61 QPLRRYGMDGAILFSDILMLPWAMGQGLRYAEGEGPLLDPIRDAEGLAALRPQ--EMRAR 118
Query: 120 LLPIFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ PI ++++ +R+ L LIGF G+P+TVA YM+ G + R A+ +
Sbjct: 119 IAPILETVARVREGLAQEAPKAALIGFAGSPFTVACYMVEGRGGGEFAHARRMAHADPAL 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
F L+ L D + +YL+AQ AG + + +FD+ +G L +F ++ I+ A+R+
Sbjct: 179 FGKLIRLLVDGTVDYLLAQAEAGAEALMLFDSWSGLLSPSQFRRWSIEPTNAIVRAIRKV 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLV 295
P+ I F + AG +L Y + T + +D + +A EG +QGNLDP +V
Sbjct: 239 RPDIPLIGFPRLAGPLLAEYAQRTGVGTVAMDTGMDPRWAAANVPEGITLQGNLDPQAVV 298
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G + +IL + PF+FNLGHGI P P++V L + +R
Sbjct: 299 AGGPSLEAEARSILAAMRGRPFVFNLGHGIVPPTPPEHVAALARIIR 345
>gi|167648971|ref|YP_001686634.1| uroporphyrinogen decarboxylase [Caulobacter sp. K31]
gi|167351401|gb|ABZ74136.1| uroporphyrinogen decarboxylase [Caulobacter sp. K31]
Length = 346
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 183/335 (54%), Gaps = 3/335 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K+L VL G PP+W MRQAGRYLPEYR +R F+D C PE E+TLQP+RR+
Sbjct: 12 KLLSVLDGTSAKRPPVWFMRQAGRYLPEYRAVRATEPTFIDFCLNPEKAAEVTLQPMRRF 71
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
+DAAI+F+DIL+I ALG+ V F EGP++ + + I + L + ++
Sbjct: 72 PYDAAIVFADILLIPQALGQKVWFEAGEGPKLGELPS--IESMRELTGQAGQALGAVGET 129
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S +R L LIGF GAPWTVA+YMI GG D R FAYQ S + L+ L D
Sbjct: 130 LSRVRSVLEPERALIGFAGAPWTVATYMIEGGS-SDRSGARTFAYQQSDKLDALIQVLVD 188
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q +G V+++F++ A L E FE + I+ +R K I F
Sbjct: 189 ATIDYLAMQAASGAQVLKLFESWAEGLSEPLFERLVTKPHTAIVEGLRAKGVTTPIIGFP 248
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GAG +++ Y R + LD + +QK +QG LDP+ L G ++ V+
Sbjct: 249 RGAGTLVEAYARTAPVQGVALDTQASAALGQAIQKTKAIQGALDPLLLRAGGDALLTRVD 308
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+L+ G GP+IFNLGHGI P +V ++ V
Sbjct: 309 QLLEQWGHGPYIFNLGHGILPDTPIAHVESVLARV 343
>gi|315497194|ref|YP_004085998.1| uroporphyrinogen decarboxylase [Asticcacaulis excentricus CB 48]
gi|315415206|gb|ADU11847.1| uroporphyrinogen decarboxylase [Asticcacaulis excentricus CB 48]
Length = 341
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 185/346 (53%), Gaps = 8/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M I+ VLQG + PP+W MRQAGR+LPEYR++R +FL C PE E TL
Sbjct: 1 MTSHTPSIVSVLQGQTLKTPPVWFMRQAGRHLPEYRELRATTPDFLSFCLNPEKAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY- 119
QP+RRY D AILFSDILVI ALG++VRF EGP + E+ L+ DL +
Sbjct: 61 QPVRRYGMDGAILFSDILVIPMALGQDVRFEAGEGPVLG-----ELPLVAQMADLAGSAG 115
Query: 120 --LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L + +++ ILR +LP +TL+GFCG PWTV +YM++G D R F Y+ +
Sbjct: 116 EALKAVGETLKILRSELPREVTLLGFCGGPWTVMTYMLNGRKAHDRSLIRAFVYEKPQLV 175
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
++D + + SA+YL Q G V++IF++ A + F+ R++ VR
Sbjct: 176 AQVMDVVIEASAQYLKMQADCGAQVLKIFESWAEGFPDPLFDQLVIEPHQRLVQRVRELG 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
I F +GA +Y D + L + PL +QK+ P+QG LDP+ L G
Sbjct: 236 VTLPIIGFPRGAEARCLDYVEQVDVQGMALGTATPLKLGQAIQKKRPIQGALDPVVLRSG 295
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D V + G GP+IFNLGHGI P +V + +RS
Sbjct: 296 GAALDDMVLKMKSAWGQGPYIFNLGHGIFPDTPIAHVERTLHLIRS 341
>gi|329847381|ref|ZP_08262409.1| uroporphyrinogen decarboxylase [Asticcacaulis biprosthecum C19]
gi|328842444|gb|EGF92013.1| uroporphyrinogen decarboxylase [Asticcacaulis biprosthecum C19]
Length = 342
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 185/344 (53%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M K ++ VL G + PPP+W MRQAGRYLPEYR +R F+D C PE E TL
Sbjct: 1 MQAGKASLIRVLGGETVTPPPVWFMRQAGRYLPEYRALRATTSGFVDFCLNPEKAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDIL+I ALG+++ F EGP + + + E + L
Sbjct: 61 QPIRRFGFDAAILFSDILMIPLALGQDLTFAAGEGPVLGELPSLEA--MRDKAPFAGEAL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ ++ L TLIGFCG PWTV +YM++G D R F Y + L
Sbjct: 119 KNVGETVARVKAGLTEATTLIGFCGGPWTVMTYMLNGRKANDRSLIRAFVYDDPTTVLSL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D + + SA+YL Q G V++IF++ A + F+ + R+I VR
Sbjct: 179 IDIVIEASAQYLKVQADQGAQVLKIFESWAEGFPDPYFDLLVTQPHIRLIHRVRELGVTL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F +GA +Y + A+ L + PL+ +ELQK P+QG LDP+ L G
Sbjct: 239 PIIGFPRGAEARCLDYAQAVTIEAMALGTATPLALGIELQKIRPIQGALDPVVLRSGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ ++ IL+ G GP IFNLGHGI P +V +K +RS
Sbjct: 299 LDAAIDRILEAWGQGPLIFNLGHGIFPDTPIAHVEQALKRIRSS 342
>gi|95113897|gb|ABF55495.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
Length = 338
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 190/323 (58%), Gaps = 7/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGR LPEYR+ + NF+++CY + ELTLQP+ R++ DAAI+FSDIL+I
Sbjct: 22 PIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILII 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
AD LG +V FV GP + P+ + + I+ LPI +I +R +LP +L
Sbjct: 82 ADVLGCDVNFVCGVGPIIKPVESPKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSL 138
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVASY+I GG K ++V + S +++ +++V+ YLI QI G
Sbjct: 139 IGFAGGPWTVASYIIEGGSSKTF--SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DVIQ+FD++AG L E F Y RII A++ ++ + I F + AG + K+Y T
Sbjct: 196 DVIQLFDSNAGALSEPLFREYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQT 255
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+ +D++VP+ +A + P+QGNLDP L I I+D PFIFN
Sbjct: 256 GVSAVSIDYNVPIKWA-KANLNIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFN 314
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P +N+ LV V+S
Sbjct: 315 LGHGVLPDTPVENIAALVNLVKS 337
>gi|148284564|ref|YP_001248654.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str.
Boryong]
gi|166234265|sp|A5CDS4|DCUP_ORITB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146740003|emb|CAM80076.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str.
Boryong]
Length = 342
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 197/342 (57%), Gaps = 12/342 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
KI++ + N PIW MRQAGRYLPEY+ +++ +F ++CY P E TLQPI R+
Sbjct: 3 KIIQAFHSSNKNYTPIWFMRQAGRYLPEYQVLKRTTNSFFELCYNPIKAAEATLQPIARF 62
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT----QEIYLLNPNIDLFLNYLLP 122
+FDAAI+FSDILV+ D+LG N+RF+ N P + I Q+ + N I
Sbjct: 63 DFDAAIIFSDILVLPDSLGINIRFINNLCPTAEKIPNLLDLQKSKIQNTKIS-------K 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++++I I+RKKL +LIGFCG PWTV +Y++ + + + ++
Sbjct: 116 VYEAIDIVRKKLNKKKSLIGFCGGPWTVLTYILGYNSRNTPKFHEIKSNNKHELIVDSIN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + ++L QI AG D++QIFD+ AG L EF Y + I+ ++ K+P+ K
Sbjct: 176 ILTKHTIDHLANQILAGADIVQIFDSWAGILPYQEFSEYVIKPTSNIVKTLKEKFPHIKI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F KGAG + Y + T+ + I D+ + L L+LQK VQGNL+P ++ N +I
Sbjct: 236 IGFPKGAGKLYHKYTKETNVDGISCDYDLQLDEMLKLQKNVLVQGNLNPNTILSKNSKII 295
Query: 303 -DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V I+D L + FIFNLGHGI P+ KNV +VK V++
Sbjct: 296 EESVIKIMDTLSNNRFIFNLGHGILPETPIKNVELIVKLVKN 337
>gi|258543861|ref|ZP_05704095.1| uroporphyrinogen decarboxylase [Cardiobacterium hominis ATCC 15826]
gi|258520901|gb|EEV89760.1| uroporphyrinogen decarboxylase [Cardiobacterium hominis ATCC 15826]
Length = 349
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 193/343 (56%), Gaps = 12/343 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L VL+G + P+W+MRQAGRYLPEYR R+ F+ +C TPE E+TLQP+ R+
Sbjct: 6 LLRVLRGEPVPRTPVWMMRQAGRYLPEYRATREAAGQFMTLCQTPELACEVTLQPLARFR 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF--LNYLLPIF 124
DAAILFSDIL I DA+G + FV EGP D P+ + P D+ L Y +
Sbjct: 66 LDAAILFSDILTIPDAMGLGLSFVPGEGPAFDRPVRSHADVQALPIPDMHDDLGY---VM 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ ++R++L + LIGF G+PWT+A+YMI G +D + YQ R + LLD L
Sbjct: 123 QAVRLIRRELDGSVPLIGFAGSPWTLATYMIEGQASRDFAAAKTLLYQEPRTLHLLLDKL 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ YL+AQI AG + +FD+ G L + Y+ + RII+ + K P I
Sbjct: 183 ARAVTAYLLAQIEAGAQAVMLFDSWGGSLAWQAYREYSLAYMQRIITGIGDKAP---VIL 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KG G L + + + + A+GLDW+ PL+ A + E +QGNLDP L ++ +
Sbjct: 240 FTKGGGNWL-DMMKDSGAAAVGLDWTTPLASARSILGENIALQGNLDPAILRASPDIIEN 298
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L G G IFNLGHGITP + P++ +++ V
Sbjct: 299 EVRRVLADYGHGHRHIFNLGHGITPDIPPEHAAAMIEAVHKHS 341
>gi|148359600|ref|YP_001250807.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Corby]
gi|296107642|ref|YP_003619343.1| uroporphyrinogen decarboxylase [Legionella pneumophila 2300/99
Alcoy]
gi|167012315|sp|A5IDL1|DCUP_LEGPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148281373|gb|ABQ55461.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Corby]
gi|295649544|gb|ADG25391.1| uroporphyrinogen decarboxylase [Legionella pneumophila 2300/99
Alcoy]
Length = 352
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 204/340 (60%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 10 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLRRYAL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGP +P+ T+ I+ L P+I L+Y +F
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHTLKIPSIPESLSY---VFD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+ L+
Sbjct: 127 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNKLA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+ I F
Sbjct: 187 VSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPVILF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 247 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCIRRE 305
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 306 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|42520838|ref|NP_966753.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99035008|ref|ZP_01314807.1| hypothetical protein Wendoof_01000367 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|81700062|sp|Q73GC9|DCUP_WOLPM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|42410578|gb|AAS14687.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|95113891|gb|ABF55491.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|95113909|gb|ABF55503.1| HemE [Wolbachia endosymbiont of Drosophila melanogaster]
gi|95113912|gb|ABF55505.1| HemE [Wolbachia endosymbiont of Drosophila melanogaster]
Length = 338
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 190/323 (58%), Gaps = 7/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGR LPEYR+ + NF+++CY + ELTLQP+ R++ DAAI+FSDIL+I
Sbjct: 22 PIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILII 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
AD LG +V FV GP + P+ + + I+ LPI +I +R +LP +L
Sbjct: 82 ADVLGCDVNFVRGVGPIIKPVESPKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSL 138
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVASY+I G K ++V + S +++ +++V+ YLI QI G
Sbjct: 139 IGFAGGPWTVASYIIEGRSSKTF--SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DVIQ+FD++AG L E F+ Y RII A++ ++ + I F + AG + K+Y T
Sbjct: 196 DVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQT 255
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+ +D++VP+ +A + P+QGNLDP L I I+D PFIFN
Sbjct: 256 GVSAVSIDYNVPIKWA-KANLNIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFN 314
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P +N+ LV V+S
Sbjct: 315 LGHGVLPDTPVENIAALVNLVKS 337
>gi|95113900|gb|ABF55497.1| HemE [Wolbachia endosymbiont of Drosophila yakuba]
gi|95113903|gb|ABF55499.1| HemE [Wolbachia endosymbiont of Drosophila teissieri]
gi|95113906|gb|ABF55501.1| HemE [Wolbachia endosymbiont of Drosophila santomea]
Length = 338
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 190/323 (58%), Gaps = 7/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGR LPEYR+ + NF+++CY + ELTLQP+ R++ DAAI+FSDIL+I
Sbjct: 22 PIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILII 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
AD LG +V FV GP + P+ + + I+ LPI +I +R +LP +L
Sbjct: 82 ADVLGCDVNFVRGVGPIIKPVESPKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSL 138
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVASY+I G K ++V + S +++ +++V+ YLI QI G
Sbjct: 139 IGFAGGPWTVASYIIEGRSSKTF--SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
DVIQ+FD++AG L E F+ Y RII A++ ++ + I F + AG + K+Y T
Sbjct: 196 DVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQT 255
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+ +D++VP+ +A + P+QGNLDP L I I+D PFIFN
Sbjct: 256 GVSAVSIDYNVPIKWA-KANLNIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFN 314
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P +N+ LV V+S
Sbjct: 315 LGHGVLPDTPVENIAALVNLVKS 337
>gi|292493773|ref|YP_003529212.1| uroporphyrinogen decarboxylase [Nitrosococcus halophilus Nc4]
gi|291582368|gb|ADE16825.1| uroporphyrinogen decarboxylase [Nitrosococcus halophilus Nc4]
Length = 357
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 200/345 (57%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ PIW+MRQAGRYLPEYR++R + ++FL +C TPE ++TLQP+
Sbjct: 5 KNDRLLRALLRQPVDQTPIWIMRQAGRYLPEYREVRAEARDFLTLCSTPELACKVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT--QEIYLLNPNIDLFLNYL 120
RR++ DAAI+FSDIL I DA+G + F + EGPR + P+ T Q L P+ + L Y
Sbjct: 65 RRFDLDAAIIFSDILTIPDAMGLGLYFSKGEGPRFERPVRTESQVAALGVPDPETELRY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ + R++L + LIGF G+PWT+A YM+ GG KD + + + + L
Sbjct: 124 --VMDALRLTRRELDGQVPLIGFSGSPWTLACYMVEGGASKDFALIKGLMFDQPQVMHRL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+ YL AQI AG + +FDT G L ++ +++ + RI+ + R+
Sbjct: 182 LEILARAVTAYLNAQIAAGAQAVMVFDTWGGALSHRDYRDFSLSYMARIVEGLARENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+G+DW+V L+ A +++ K+ +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGLWLEAMAE-TGCDALGVDWTVDLAKARMQVGKQVALQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V+ IL G G +FNLGHGI P VDP+ V LV TV
Sbjct: 301 TARVRQEVDEILKAYGRGSGHVFNLGHGIHPTVDPEKVAVLVDTV 345
>gi|254281690|ref|ZP_04956658.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR51-B]
gi|219677893|gb|EED34242.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR51-B]
Length = 355
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 199/344 (57%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +++ L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+T+QP+
Sbjct: 5 KNDRLIRALLREPVDRTPLWMMRQAGRYLPEYRATRAEAGSFMALCSNPELACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLL 121
RRY DAAILFSDIL I DA+G + F E EGPR + + ++ L+PN + L
Sbjct: 65 RRYAMDAAILFSDILTIPDAMGLGLYFSEGEGPRFERTIDSAADVARLDPN--RARDELG 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S++RK L + LIGF G+PWT+A+YM+ GG KD + + A+ + + LL
Sbjct: 123 YVMDAVSLIRKTLDGSVPLIGFSGSPWTLATYMVEGGSSKDFAKTKAMAFNEPQQMHQLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+ A YL Q+ G V+QIFDT G LG ++ ++ R + RII + R+ +
Sbjct: 183 EKLAQAVAVYLSEQVAQGAQVLQIFDTWGGALGHAAYQEFSLRYMTRIIEQLPREADGRR 242
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F KG G L+ ++A+GLDW+ + A E + + +QGN+DP L
Sbjct: 243 VPVIVFTKGGGQWLEAIAG-CGADAVGLDWTTDIGAARERVGDKVALQGNMDPAMLHASP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL+ G G IFNLGHG+TP ++P++V +V V
Sbjct: 302 ERIRSEVATILERFGPGTGHIFNLGHGVTPGINPEHVGAMVDAV 345
>gi|54297955|ref|YP_124324.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Paris]
gi|81679428|sp|Q5X3M4|DCUP_LEGPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|53751740|emb|CAH13162.1| Uroporphyrinogen decarboxylase [Legionella pneumophila str. Paris]
Length = 352
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 202/340 (59%), Gaps = 9/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+RRY
Sbjct: 10 LRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLRRYAL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGP +P+ T+ I+ L P+I L+Y +F
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHALKIPSIPESLSY---VFD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+ L+
Sbjct: 127 AARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLNKLA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
YL QI AGV+ + IFDT G L +++++ + +I+ ++ +YP+ I F
Sbjct: 187 VSVTAYLTEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKNEYPDIPVILF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
K G L+ + T +A+G+DW+ L+ A + + + +QGNLDP L+ +
Sbjct: 247 TKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTAKNCIRRE 305
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 306 VGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|118602987|ref|YP_904202.1| uroporphyrinogen decarboxylase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|171704462|sp|A1AXS4|DCUP_RUTMC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118567926|gb|ABL02731.1| uroporphyrinogen decarboxylase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 347
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 202/331 (61%), Gaps = 13/331 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR+ R K +FL +C +PE E+T+QPI R++ DAAILFSDIL I
Sbjct: 18 PIWVMRQAGRYLPEYRETRIKAGDFLTLCKSPELACEVTMQPIDRFDLDAAILFSDILTI 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F+E EGP+ +P+ T L PN+ L+Y + ++S+++K L N
Sbjct: 78 PDAMGLGLYFLEGEGPKFSNPLNTLSSIEQLKKPNVGNELSY---VTDAVSVIKKALNNK 134
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A+YM+ GG K+ + + Y+N + LLD LSD+ +YL QI
Sbjct: 135 VPLIGFTGSPWTLATYMVEGGSSKNFVKVKGLMYENPVYMHQLLDKLSDIIIDYLNGQIQ 194
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS---FAKGAGYMLK 254
GVD + IFDT G L + +E+++ + + +I++ ++RK+ N K I F KG L+
Sbjct: 195 VGVDSVMIFDTWGGLLNKQSYEDFSLQYMTKIVNGIKRKF-NGKTIPITLFTKGGAMWLE 253
Query: 255 NYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL- 312
+ + + LDW+V L+ A + + + +QGNLDP L + + + V IL
Sbjct: 254 QIAN-SGCDGVALDWTVELNDAQQRIGAKVALQGNLDPCVLYASPEKIREEVKKILSQFQ 312
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +FNLGHGI+P V+P+++ LV V
Sbjct: 313 GDTGHVFNLGHGISPDVNPEHMKVLVDVVHE 343
>gi|88705186|ref|ZP_01102897.1| Uroporphyrinogen decarboxylase (URO-D) [Congregibacter litoralis
KT71]
gi|88700276|gb|EAQ97384.1| Uroporphyrinogen decarboxylase (URO-D) [Congregibacter litoralis
KT71]
Length = 355
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 192/346 (55%), Gaps = 6/346 (1%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R++ +FLD+C E E+T
Sbjct: 1 MSELKNDRFLRALMREPVDRTPLWMMRQAGRYLPEYRATREEAGSFLDLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL I DALG + F EGPR L N +
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDALGLGLYFETGEGPRFRKTVRSAEDLAGLNSFKASDD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +RK+L + LIGF G+PWT+A+YM+ GG KD + + AY +
Sbjct: 121 LGYVMDAVSAIRKELNGSVPLIGFSGSPWTLATYMVEGGSSKDFSRVKTMAYDQPELMHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D A+YL AQ+ AG +QIFDT G L ++ ++ + + RI+S + R+
Sbjct: 181 LLTVLADAVADYLTAQVEAGAQALQIFDTWGGSLSAGAYKEFSLKYMQRIVSRLPREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
I F KG G L + A+G+DW+ ++ A +L + +QGN+DPM L
Sbjct: 241 RPVPVIVFTKGGGQWLSTIAD-CGAQAVGIDWTTDIATAKKLVGDRVAIQGNMDPMMLFA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP V+P +V V V
Sbjct: 300 SPDRIREEVAGILAGFGHGSGHVFNLGHGITPGVNPDHVTAFVDAV 345
>gi|117923343|ref|YP_863960.1| uroporphyrinogen decarboxylase [Magnetococcus sp. MC-1]
gi|166234253|sp|A0L3L1|DCUP_MAGSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117607099|gb|ABK42554.1| uroporphyrinogen decarboxylase [Magnetococcus sp. MC-1]
Length = 356
Score = 242 bits (617), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 201/352 (57%), Gaps = 12/352 (3%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ K + ++ ++ PIWLMRQAGRYLPEYR+ R + +F+ +C E E+T+QP
Sbjct: 2 KSKHRFIQACFRQPVDRTPIWLMRQAGRYLPEYRKTRAQAGDFMALCKNTELATEVTMQP 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP---ITTQEIYLLNPNIDLFLNY 119
IRRY DAAILFSDILVI +A+G +VRF EGP +DP + L++ + + L+Y
Sbjct: 62 IRRYGLDAAILFSDILVIPEAMGMDVRFATGEGPLLDPPVRVHGDIEKLIHTDPEDSLDY 121
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++++ +RK L I LIGF G+PWT+A+YM+ GG K G + Y + +
Sbjct: 122 ---VMRAVASIRKALNEEIPLIGFSGSPWTLATYMVEGGSSKTFGLVKGMLYDAPESMHL 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D+ A YL AQI G +QIFDT G L + F ++ RS+ ++ + R
Sbjct: 179 LLDKLADMVAAYLNAQIRHGAQAVQIFDTWGGVLSQPTFREFSLRSMKAVVDRLDRTNSA 238
Query: 240 AK---FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ I FAKG M+++ + + + +GLDW+ + E + + +QGN+DP L
Sbjct: 239 GERIPVILFAKGCNAMVEDIAQ-SGCDVVGLDWTSEIGPLRERIGHKVALQGNMDPALLY 297
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + G +L G P IFNLGHG+ P + P +V LV+ V+ E +
Sbjct: 298 ASPERIAQGAREVLQAFGPHPGHIFNLGHGMAPDMSPDHVEALVRAVKEEGL 349
>gi|262375968|ref|ZP_06069199.1| uroporphyrinogen decarboxylase [Acinetobacter lwoffii SH145]
gi|262309062|gb|EEY90194.1| uroporphyrinogen decarboxylase [Acinetobacter lwoffii SH145]
Length = 356
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 193/348 (55%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDATPVWMMRQAGRYLPEYRETRAKAGDFLSLCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYL 120
RRY+ DAAILFSDIL + DALG + F EGP+ T Q++ L N L+Y
Sbjct: 65 RRYDLDAAILFSDILTVPDALGLGLYFEAGEGPKFHKTIRTEQDVANLPAFNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVSTIRSALSGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D EYL AQI AG +QIFD+ G L E+ ++ + +I++ ++R+
Sbjct: 182 LDRLADAVTEYLNAQIDAGAQAVQIFDSWGGALAHREYIEFSLNYMQKIVAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L+ T ++A GLDW+ PL+ A + + +QGNLDP L
Sbjct: 242 KIPVILFTKGGGQWLEPM-ITTGADAFGLDWTTPLNVARQTVAGRAALQGNLDPATLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
+ +I A+L D +G +I NLGHGIT VDP N + TV
Sbjct: 301 SDTIIKATKAMLDDAYANGEKTGYIANLGHGITQWVDPANPKAFIDTV 348
>gi|221236815|ref|YP_002519252.1| uroporphyrinogen decarboxylase [Caulobacter crescentus NA1000]
gi|220965988|gb|ACL97344.1| uroporphyrinogen decarboxylase [Caulobacter crescentus NA1000]
Length = 363
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 187/340 (55%), Gaps = 3/340 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP+RR+
Sbjct: 25 KFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQPMRRF 84
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDA+I+F+DIL+I ALG+ V F EGP++ + + E + L + ++
Sbjct: 85 PFDASIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVES--MAEKAGEAGKALSLVGET 142
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+ L D
Sbjct: 143 LTRVRSALDPDKALIGFAGAPWTVATYMIEKGS-SDRSGARTFAYQNPETLDALIQVLVD 201
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q+ AG +++F++ A L E F+ + RII +R + I F
Sbjct: 202 ATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPIIGFP 261
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GAG ++++Y T + LD S +QK +QG LDP+ L G ++ V+
Sbjct: 262 RGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDPLLLRAGGDALLKRVD 321
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 322 EMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 361
>gi|16127993|ref|NP_422557.1| uroporphyrinogen decarboxylase [Caulobacter crescentus CB15]
gi|239977226|sp|P0CAX3|DCUP_CAUCR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239977334|sp|B8GW41|DCUP_CAUCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13425539|gb|AAK25725.1| uroporphyrinogen decarboxylase [Caulobacter crescentus CB15]
Length = 351
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 187/340 (55%), Gaps = 3/340 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP+RR+
Sbjct: 13 KFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQPMRRF 72
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDA+I+F+DIL+I ALG+ V F EGP++ + + E + L + ++
Sbjct: 73 PFDASIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVES--MAEKAGEAGKALSLVGET 130
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+ L D
Sbjct: 131 LTRVRSALDPDKALIGFAGAPWTVATYMIEKGS-SDRSGARTFAYQNPETLDALIQVLVD 189
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q+ AG +++F++ A L E F+ + RII +R + I F
Sbjct: 190 ATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPIIGFP 249
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GAG ++++Y T + LD S +QK +QG LDP+ L G ++ V+
Sbjct: 250 RGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDPLLLRAGGDALLKRVD 309
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 310 EMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 349
>gi|254482773|ref|ZP_05096011.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2148]
gi|214037132|gb|EEB77801.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2148]
Length = 356
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 190/344 (55%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L LQ ++ PIW+MRQAGRYLPEYR R++ +FLD+C E E+T+QP+
Sbjct: 5 KNDRFLRALQRQPVDQTPIWMMRQAGRYLPEYRATRQQAGSFLDLCKNAELACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY DAAILFSDIL + DALG + F E EGPR E L N + L +
Sbjct: 65 RRYPMDAAILFSDILTVPDALGLGLYFEEGEGPRFHKTVRSEADLAGLNSIKADDDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R +L + LIGF G+PWT+A+YM+ GG KD Q + AY + LL
Sbjct: 125 MNAVRTIRAELNGLVPLIGFTGSPWTLATYMVEGGSSKDFAQVKAMAYDKPELMHNLLSL 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
L+D A+YL AQI AG +QIFDT G L ++ ++ + + +II+ ++ P +
Sbjct: 185 LADAVADYLAAQIRAGAQAVQIFDTWGGSLSAAAYQEFSLKYMQQIIARLQAD-PETRAV 243
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L N + +G+DW+ + A ++ +QGN+DP L
Sbjct: 244 PVIVFTKGGGQWL-NAIADCGAQGVGIDWTTEIGAARAQIGNRVALQGNMDPSMLYASPA 302
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGITP V+P +V V VR
Sbjct: 303 RIREEVASILAGYGHGSGHVFNLGHGITPGVNPDHVTAFVDAVR 346
>gi|254516140|ref|ZP_05128200.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR5-3]
gi|219675862|gb|EED32228.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR5-3]
Length = 355
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 198/349 (56%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R++ +FLD+C E E+T
Sbjct: 1 MSELKNDRFLRALLRQPVDRTPLWMMRQAGRYLPEYRATREQAGSFLDLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLF 116
+QP+RRY DAAILFSDIL I DALG + F EGPR + +++ LN N
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDALGLGLYFETGEGPRFRKTVRSAEDLAGLNSFNAKDD 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++S +RK+L I LIGF G+PWT+A+YM+ GG KD + + AY
Sbjct: 121 LGY---VMDAVSAIRKELNGSIPLIGFSGSPWTLATYMVEGGSSKDFSRVKAMAYDQPEL 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LL L+D A+YL AQ+ AG +QIFDT G L ++ ++ + + RI+S + ++
Sbjct: 178 MHELLTVLADAVADYLTAQVEAGAQALQIFDTWGGSLSAGAYKEFSLKYMQRIVSRLPKE 237
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMR 293
I F KG G L + A+G+DW+ +S A ++ + +QGN+DPM
Sbjct: 238 ADGRPVPVIVFTKGGGQWLSTIAD-CGAQAVGIDWTTDISTAKQVVGDRVALQGNMDPMM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + + V IL G G +FNLGHGITP V+P +V V V
Sbjct: 297 LFASPERIREEVGNILAGFGHGSGHVFNLGHGITPGVNPDHVTAFVDAV 345
>gi|47216605|emb|CAG10903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 368
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 198/330 (60%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPE+R+ R+ ++F D C +PE ELTLQP+RR+ FDAAI+FSDILV+
Sbjct: 33 PVWCMRQAGRYLPEFRKAREG-RDFFDTCRSPEACCELTLQPLRRFPFDAAIIFSDILVV 91
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLF--LNYLLPIFQSISILRKKLPN 136
ALG +V+ V +GP +P+ E + L +D+ L+Y +F++I++ R KL
Sbjct: 92 PQALGMSVQMVAGKGPTFPEPLKEPEDLQQLQAKVDVSKELDY---VFKAITLTRHKLEG 148
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAPWT+ SYMI GG H + + + Y++ A + LL L+DV +YL+ Q+
Sbjct: 149 KVPLIGFSGAPWTLMSYMIEGGGSSTHAKAKRWLYRHPEASHMLLRMLTDVIVQYLLGQV 208
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA----KFISFAKGAGYM 252
AG +Q+F++HAG LG EF+ ++ + I V+ K A + FAK A Y
Sbjct: 209 AAGAQALQVFESHAGILGPAEFKEFSLAYLRDIARRVKEKLKEAGQDVPMVVFAKDAHYA 268
Query: 253 LKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L++ + + +GLDW+V P S + +QGN+DP L + + V +L+
Sbjct: 269 LEDLSQ-SHYEVVGLDWTVDPRSARERTGGKVSLQGNMDPCALYAPKEHISRIVKKMLEG 327
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G+ +I NLGHG+ P +DP+NV V+ V
Sbjct: 328 FGTKGYIANLGHGLYPDMDPENVGAFVEAV 357
>gi|119505546|ref|ZP_01627618.1| Uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2080]
gi|119458655|gb|EAW39758.1| Uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2080]
Length = 360
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+IR++ +F+ +C PE E+T+QP+
Sbjct: 5 KNDRFLRALLREPVDRTPLWMMRQAGRYLPEYREIRQQAGSFMSLCSNPELACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLNPNIDLFLNYLL 121
RRY DAAILFSDIL I DA+G + F E EGP + P+ +I L P ++ L
Sbjct: 65 RRYAMDAAILFSDILTIPDAMGLGLYFAEGEGPGFERPLQGAADIEALEPT--RAVSELG 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S++R++L + LIGF G+PWT+A+YM+ GG KD + + A+ + + LL
Sbjct: 123 YVMDAVSLIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKDFAKVKSLAFNDPAIMHMLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+D A YL AQ+ G +QIFDT G L + ++ + + RII + R+ +
Sbjct: 183 EKLADAVAMYLTAQVEHGAQALQIFDTWGGALSHAAYPEFSLQYMTRIIEQLPREADGRR 242
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F KG G L+ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 243 VPVIVFTKGGGQWLEAIAE-CGADAVGLDWTTDMGAARQRVGDRVALQGNMDPSMLFAAP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V ++LD G G +FNLGHGITP V+P +V +V V
Sbjct: 302 GRIRSEVASVLDSFGQGTGHVFNLGHGITPGVNPDHVSAMVDAV 345
>gi|254420353|ref|ZP_05034077.1| uroporphyrinogen decarboxylase [Brevundimonas sp. BAL3]
gi|196186530|gb|EDX81506.1| uroporphyrinogen decarboxylase [Brevundimonas sp. BAL3]
Length = 352
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 197/343 (57%), Gaps = 10/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ L+G ++ PP+W MRQAGRYLPEYR++R + +F+ C PE E TLQP+RR+
Sbjct: 14 MIRALRGETLDRPPVWFMRQAGRYLPEYRRLRAEAPDFIAFCLNPEMAAEATLQPMRRFG 73
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQ 125
FDAAI+F+DIL+I ALG++V F EGPR+ PI + + L P+ L+ + +
Sbjct: 74 FDAAIVFADILLIPRALGQDVWFETGEGPRLGEMPIPGR-MAELAPDAGAHLSA---VGE 129
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK----DHGQNRVFAYQNSRAFNWLL 181
++SI+RK L LIGF GAPWTVA+YM+ G + Q R +AY + R + L
Sbjct: 130 TLSIVRKALEPERALIGFAGAPWTVATYMLDGEHRTIGKGERAQARTYAYADPRRVDETL 189
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L + +A YL Q AG V++IF++ A L + FE + ++ R
Sbjct: 190 EVLVEATARYLKMQADAGAQVLKIFESWAEGLPDDLFERLVLKPHQALVRRTRELGVTVP 249
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F +G+ + + Y + +A+ LD + PL +Q+ P+QG LDP+ L G + +
Sbjct: 250 LIGFPRGSAALAERYAEEVEVDAVALDTACPLEVGKRVQQIKPIQGALDPLLLRAGGERL 309
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ +++ G GP++FNLGHGI P V +V ++K + ++
Sbjct: 310 DRRVDQLMEAWGQGPWVFNLGHGILPDVPIDHVERVLKRIGAQ 352
>gi|294085208|ref|YP_003551968.1| uroporphyrinogen decarboxylase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664783|gb|ADE39884.1| uroporphyrinogen decarboxylase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 341
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 190/342 (55%), Gaps = 10/342 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L G + PPIW+MRQAGRYL EYR IR+ +F+ C E +T+QPI R+ F
Sbjct: 5 LKTLAGQKMPIPPIWMMRQAGRYLKEYRDIRETTPDFISFCLDAEKASNVTIQPIVRFGF 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPI----TTQEIYLLNPNIDLFLNYLLPIF 124
DAAI+FSDIL++ AL RNVRF N GP +DP+ + E L + L P+
Sbjct: 65 DAAIIFSDILMVPWALDRNVRFKPNHGPMLDPLADAASLDEALLAD-----VPTKLAPVA 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I+ R L + LIGF GAPWTV +YM+ GG KD +R + + F+ ++D +
Sbjct: 120 NAITRTRSLLRDDTALIGFAGAPWTVMTYMLEGGSSKDFNLSRQMLWNDPAGFDKIMDIV 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + E+L Q HAG D + +FD+ A + + + II+A+R + + I
Sbjct: 180 TQATIEFLCLQAHAGADALMLFDSWASAVPSWHRDAVVNKPAATIIAALRARGISQPVIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KG G + Y +A+GLD + + +A + L PVQGNLDP+ L+ G+ VM+
Sbjct: 240 FPKGIGEGILPYVDQVGVDALGLDHGMDIRWAHKNLPAYLPVQGNLDPISLLSGDDVMLA 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ IL V P IFNLGHGITP NV ++ VR +
Sbjct: 300 NIDDILGVFADRPHIFNLGHGITPATPIANVTKMITHVRQAR 341
>gi|146328900|ref|YP_001210198.1| uroporphyrinogen decarboxylase [Dichelobacter nodosus VCS1703A]
gi|172047326|sp|A5EX29|DCUP_DICNV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146232370|gb|ABQ13348.1| uroporphyrinogen decarboxylase [Dichelobacter nodosus VCS1703A]
Length = 345
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 197/340 (57%), Gaps = 15/340 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L VL+G + P+W+MRQAGRYL EYR++R K +FLD+C PE EL LQP++R+
Sbjct: 7 LRVLRGEKVERTPVWIMRQAGRYLAEYRKLRAKVPHFLDVCRNPELACELALQPLQRFPL 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ---EIYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL I DA+G + FV EGP+ P+ + E L P+ L+Y +F
Sbjct: 67 DAAILFSDILTIPDAMGLGLSFVAGEGPQFAKPLRSSAAIESLTLPPSGS--LDY---VF 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++S ++ L + + LIGF G+PWT+A+YMI GG KD + FA+ +A + LL L
Sbjct: 122 AAVSATKRALNDRVPLIGFAGSPWTLAAYMIEGGASKDFAFAKSFAFSQPQAMDVLLTQL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ +YL QI AG + IFD+ G L +E ++ + +I++AV P I
Sbjct: 182 TCAITDYLRGQIKAGAQAVMIFDSWGGVLPYWAYEQFSLPYLKKIVAAVHTVAP---VIV 238
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMID 303
F KG G L + + + A+G+DW+V L+ A ++ E V QGNLDP L+ + +
Sbjct: 239 FTKGGGLWLAAQKTI-GAAALGVDWTVSLAAARKIVGESIVLQGNLDPTFLMTDPKTIRQ 297
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
V L G+G +IFNLGHGITP P NV +++ V
Sbjct: 298 AVAKTLADYGNGHRYIFNLGHGITPNASPDNVAAMIEAVH 337
>gi|18859531|ref|NP_571422.1| uroporphyrinogen decarboxylase [Danio rerio]
gi|20138048|sp|Q9PTS2|DCUP_DANRE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|6502530|gb|AAF14346.1|AF095639_1 uroporphyrinogen decarboxylase [Danio rerio]
gi|220673232|emb|CAX12678.1| uroporphyrinogen decarboxylase [Danio rerio]
Length = 369
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/350 (38%), Positives = 203/350 (58%), Gaps = 19/350 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 17 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KDFFETCRSPEACCELTLQPL 75
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLF--LNY 119
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L +D++ L+Y
Sbjct: 76 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 135
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A +
Sbjct: 136 ---VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSATHSKAKRWLYRYPEASHK 192
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP- 238
LL L+DV EYL+ Q+ AG +Q+F++H GCLG EF+ ++ + I V+ K
Sbjct: 193 LLSQLTDVIVEYLLGQVKAGAQALQVFESHTGCLGPVEFKEFSLPYLRDIARRVKDKIKE 252
Query: 239 ----NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
N I FAK Y L++ L++S +GLDW++ P S + + +QGN+DP
Sbjct: 253 SGLDNVPMIVFAKDGHYGLED---LSESAYEVVGLDWTIDPRSARVRTGGKVSLQGNMDP 309
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V
Sbjct: 310 CALYGTKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAV 359
>gi|148245057|ref|YP_001219751.1| uroporphyrinogen decarboxylase [Candidatus Vesicomyosocius okutanii
HA]
gi|172047234|sp|A5CVK5|DCUP_VESOH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146326884|dbj|BAF62027.1| uroporphyrinogen decarboxylase [Candidatus Vesicomyosocius okutanii
HA]
Length = 345
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/333 (40%), Positives = 196/333 (58%), Gaps = 21/333 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR R K +FL +C +PE E+T+QPI R++ DAAILFSDIL I
Sbjct: 18 PIWIMRQAGRYLPEYRATRAKAGDFLTLCKSPELACEVTMQPIDRFDLDAAILFSDILTI 77
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
DA+G + F+E EGP+ +PI ++I ++ +++ L+Y +F +S ++K L N +
Sbjct: 78 PDAMGLGLYFMEGEGPKFRNPIKNLKDIKKISTDLNNDLSY---VFDGVSTIKKSLNNRV 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFA------YQNSRAFNWLLDFLSDVSAEYL 192
LIGF G+PWT+A+YMI GG R+FA + + A + LL L+ YL
Sbjct: 135 PLIGFSGSPWTLATYMIEGG-------GRIFASTKKMLFNDPEALHLLLMKLTKSVIAYL 187
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
QI +G D + +FDT G L E + +++ + +I+ V+ ++PN F+K G
Sbjct: 188 NQQIVSGADSVMVFDTWGGVLSEQNYLDFSLYYMAKIVKGVKAQHPNIPITLFSKNGGKY 247
Query: 253 LKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L + T + +G+DW+V L E+ + +QGNLDP L +V+ V +L
Sbjct: 248 LTHIAN-TGCDGVGIDWTVELYQVQQEVGNKVAIQGNLDPAVLYATPEVIEREVKKVLSQ 306
Query: 312 L-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +IFNLGHGITP VDP+NV LV V +
Sbjct: 307 FKGDTGYIFNLGHGITPDVDPENVKILVDCVHT 339
>gi|77166455|ref|YP_344980.1| uroporphyrinogen decarboxylase HemE [Nitrosococcus oceani ATCC
19707]
gi|254435317|ref|ZP_05048824.1| uroporphyrinogen decarboxylase [Nitrosococcus oceani AFC27]
gi|123730594|sp|Q3J6U6|DCUP_NITOC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|76884769|gb|ABA59450.1| Uroporphyrinogen decarboxylase HemE [Nitrosococcus oceani ATCC
19707]
gi|207088428|gb|EDZ65700.1| uroporphyrinogen decarboxylase [Nitrosococcus oceani AFC27]
Length = 357
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 202/345 (58%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR++R K +FL +C TPE E+TLQP+
Sbjct: 5 KNDRFLRALLRQPVDRTPIWIMRQAGRYLPEYREVRAKAGDFLTLCTTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT--QEIYLLNPNIDLFLNYL 120
RR++ DAAI+FSDIL I A+G + F + EGPR + P+ T Q L P+ + L+Y
Sbjct: 65 RRFDLDAAIIFSDILTIPHAMGLGLYFSKGEGPRFERPVRTKNQVSALGVPDPESDLSY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + R++L + LIGF G+PWT+A YM+ GG KD + +++ + + L
Sbjct: 124 --VMEALRLTRRELDGRVPLIGFSGSPWTLACYMVEGGSSKDFALIKGLMFEHPQVMHHL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+ YL AQI AG + +FDT G L ++ +++ + RI+ V R+
Sbjct: 182 LEILAQAVTVYLNAQIAAGAQAVMLFDTWGGALSHRDYRDFSLSYMARIVEGVVRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T +A+G+DW+V L+ A +++ K+ +QGN+DP L
Sbjct: 242 QVPVILFTKGGGLWLETMAG-TGCDALGVDWTVDLAKARMQVGKQVALQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
++ + + I+ G+G +FNLGHGI P V P+ V LV V
Sbjct: 301 SERVRQEASEIIKAYGAGSGHVFNLGHGIHPTVMPEKVAALVDAV 345
>gi|62204806|gb|AAH92696.1| Urod protein [Danio rerio]
Length = 402
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 203/352 (57%), Gaps = 19/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R KNF + C +PE ELTLQP+
Sbjct: 50 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KNFFETCRSPEACCELTLQPL 108
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLF--LNY 119
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L +D++ L+Y
Sbjct: 109 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 168
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A +
Sbjct: 169 ---VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSVTHSKAKRWLYRYPEASHK 225
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP- 238
LL L+DV EYL+ Q+ AG +Q+F++H GCLG EF+ ++ + V+ K
Sbjct: 226 LLSQLTDVIVEYLLGQVKAGAQALQVFESHTGCLGPVEFKEFSLPYLRDTARRVKDKIKE 285
Query: 239 ----NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
N I FAK Y L++ L++S +GLDW++ P S + + +QGN+DP
Sbjct: 286 SGLDNVPMIVFAKDGHYGLED---LSESAYEVVGLDWTIDPHSARVRTGGKVSLQGNMDP 342
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 343 CALYGTKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHN 394
>gi|78484468|ref|YP_390393.1| uroporphyrinogen decarboxylase [Thiomicrospira crunogena XCL-2]
gi|123556100|sp|Q31JF4|DCUP_THICR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78362754|gb|ABB40719.1| uroporphyrinogen decarboxylase [Thiomicrospira crunogena XCL-2]
Length = 354
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 193/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR RK+ +F+D+C E E+TLQP+
Sbjct: 5 QNDRFLRALLKEPVDQTPVWMMRQAGRYLPEYRATRKQAGSFMDLCRNKELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYL 120
RY DAAILFSDIL I DA+G +RF EGP D PI + L P++ L Y
Sbjct: 65 ERYPLDAAILFSDILTIPDAMGLELRFQTGEGPIFDKPIKSMSDAKKLFVPDMASELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 124 --VMDAVSTIRKALDGRVPLIGFSGSPWTLATYMVEGGSSKTFAKIKAMMYDQPATLHHI 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG +QIFDT G L +++ ++ + +I+ ++R+
Sbjct: 182 LDVLADSVIAYLNAQIEAGAQAVQIFDTWGGVLTPRDYKEFSLNYMAKIVDGLKRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 KVPVILFTKGGGQWLESMAE-TGCDALGLDWTTDIDDARARVGDKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL+ G G +FNLGHGI P++DP++ +K V
Sbjct: 301 PDRIREEVATILEKYGQGTGHVFNLGHGIHPEIDPEHAGAFIKAV 345
>gi|260072644|gb|ACX30542.1| uroporphyrinogen-III decarboxylase [uncultured SUP05 cluster
bacterium]
gi|269468640|gb|EEZ80280.1| uroporphyrinogen-III decarboxylase [uncultured SUP05 cluster
bacterium]
Length = 344
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 192/326 (58%), Gaps = 8/326 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR RKK +F+ +C PE E+T+QP+ R++ DAAILFSDIL I
Sbjct: 18 PIWVMRQAGRYLPEYRATRKKAGDFMSLCKNPELACEVTMQPMDRFDLDAAILFSDILTI 77
Query: 81 ADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
DA+G + F E EGP+ + PI T +I + ++ L Y +F ++S ++ L
Sbjct: 78 PDAMGLGLYFSEGEGPKFERPIQTLADIEAIPSEVNNDLTY---VFDAVSTIKSALGARA 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YMI GG K + + + + + + LLD L+D YL Q+ +
Sbjct: 135 PLIGFSGSPWTLATYMIEGGSSKTFAKTKAMLFNDPKMLHLLLDKLADSVIAYLDQQVQS 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD + +FDT G L + + +++ + +I++ V+ K+PN F+K G L
Sbjct: 195 GVDSLMVFDTWGGVLSKSNYLDFSLSYMQKIVNGVKAKHPNTPITLFSKNGGKHLSEIAD 254
Query: 259 LTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL-GSGP 316
T + +G+DW+V LS ++ + +QGNLDP + +V+ V +L G
Sbjct: 255 -TGCDGVGIDWTVELSEVEQQIGSKVAIQGNLDPAVMYATPEVVRVEVKKVLSQFKGDTG 313
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVR 342
+FNLGHGITP VDP+N+ LV +V
Sbjct: 314 HVFNLGHGITPDVDPENMKVLVDSVH 339
>gi|254491241|ref|ZP_05104422.1| uroporphyrinogen decarboxylase [Methylophaga thiooxidans DMS010]
gi|224463754|gb|EEF80022.1| uroporphyrinogen decarboxylase [Methylophaga thiooxydans DMS010]
Length = 354
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 193/349 (55%), Gaps = 11/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR++R K +F+ +C TPE E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDKTPVWVMRQAGRYLPEYREVRAKAGDFMTLCSTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAI+FSDIL I DA+G + FV EGP+ + N P+++ L Y
Sbjct: 65 RRYDLDAAIIFSDILTIPDAMGLGLHFVTGEGPKFSKTIQTPADIKNLTVPDMEDSLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + R+++ + LIGF G+PWT+A YMI GG KD + + + + L
Sbjct: 124 --VMDAIRLTRREIDGKVPLIGFSGSPWTLACYMIEGGSSKDFAKIKGMMFDAPDQMHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG I +FDT G L + ++ + +IIS ++R+
Sbjct: 182 LDVLADSVIAYLNAQIQAGAQAIMLFDTWGGLLSPENYNAFSLAYMKKIISGLQREADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T N++GLDW+ ++ A + + + +QGN+DP L
Sbjct: 242 EVPVTLFTKGGGQWLEAMAE-TGVNSLGLDWTTDITQARQRVGNKVTLQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI P VDP+N+ LV V +
Sbjct: 301 GDTVEREVMKILAGFGKGTGHVFNLGHGIHPAVDPENMARLVDAVHTHS 349
>gi|79160119|gb|AAI08076.1| Uroporphyrinogen decarboxylase [Danio rerio]
Length = 369
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 203/352 (57%), Gaps = 19/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 17 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KDFFETCRSPEACCELTLQPL 75
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLF--LNY 119
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L +D++ L+Y
Sbjct: 76 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 135
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A +
Sbjct: 136 ---VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSVTHSKAKRWLYRYPEASHK 192
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP- 238
LL L+DV EYL+ Q+ AG +Q+F+ H GCLG EF+ ++ + I V+ K
Sbjct: 193 LLSQLTDVIVEYLLGQVKAGAQALQVFEPHTGCLGPVEFKEFSLPYLRDIARRVKDKIKE 252
Query: 239 ----NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
N I FAK Y L++ L++S +GLDW++ P S + + +QGN+DP
Sbjct: 253 SGLDNVPMIVFAKDGHYGLED---LSESAYEVVGLDWTIDPRSARVRTGGKVSLQGNMDP 309
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 310 CALYGTKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHN 361
>gi|295691557|ref|YP_003595250.1| uroporphyrinogen decarboxylase [Caulobacter segnis ATCC 21756]
gi|295433460|gb|ADG12632.1| uroporphyrinogen decarboxylase [Caulobacter segnis ATCC 21756]
Length = 347
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 183/340 (53%), Gaps = 3/340 (0%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K L L G PPIW MRQAGRYLPEYR +R +F+ C+ PE E+TLQP+RR+
Sbjct: 9 KFLAALSGETHAHPPIWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQPMRRF 68
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDAAI+F+DIL+I ALG+ V F EGP++ + + E + L + ++
Sbjct: 69 PFDAAIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVES--MAEKAGEAGKALSLVGET 126
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+ L D
Sbjct: 127 LTRVRSALDPSKALIGFAGAPWTVATYMIEKGS-SDRSGARTFAYQNPETTDALIQVLVD 185
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q+ AG +++F++ A L E F+ + +I+ +R + I F
Sbjct: 186 STIDYLAMQVDAGAQAVKLFESWAEGLSEPLFDRLVTQPHKKIVEGLRARGVTVPIIGFP 245
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
+GAG +++ Y + LD +QK +QG LDP+ L G ++ V+
Sbjct: 246 RGAGALVEGYAAQVPVQGVALDTQASAKLGQAIQKSKTIQGALDPLLLRAGGDALLRRVD 305
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 306 ELLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 345
>gi|88811515|ref|ZP_01126770.1| uroporphyrinogen decarboxylase [Nitrococcus mobilis Nb-231]
gi|88791404|gb|EAR22516.1| uroporphyrinogen decarboxylase [Nitrococcus mobilis Nb-231]
Length = 337
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 193/327 (59%), Gaps = 11/327 (3%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W+MRQAGRYLPEYRQ+R + +F+ +C PE ++TLQP+ RY DAAILFSDIL +
Sbjct: 1 MWIMRQAGRYLPEYRQVRAQAGSFMTLCRNPELACKVTLQPLERYPLDAAILFSDILTVP 60
Query: 82 DALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
DA+G + F E EGPR + P+ + L +P+I L Y + +I ++R +L +
Sbjct: 61 DAMGLGLYFEEGEGPRFERPVRSLRAIADLSSPDIASELRY---VTDAIGLIRHELAGRV 117
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YM+ GG + + + Y++ +A + LL+ ++ A+YL AQ+ A
Sbjct: 118 PLIGFSGSPWTLATYMVEGGSSRTFHRIKTLLYEHPQALHQLLEKVAQAVADYLNAQVEA 177
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNY 256
G + IFDT G L + ++ V R++ A+R + I F KG G L+
Sbjct: 178 GAQALMIFDTWGGVLAHEAYLEFSLEPVRRVLEALRLNTSEGRIPVIVFTKGGGLWLEAL 237
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ +NAIGLDWSV ++ A + E +QGNLDP L V+ V +L+ G
Sbjct: 238 AGV-GANAIGLDWSVDIAAARQRVGERVALQGNLDPCVLYAAPAVIRREVQRVLEAYGPH 296
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTV 341
P +FNLGHGI P+VDP +V +++ V
Sbjct: 297 PGHVFNLGHGIHPEVDPDHVSAMIEAV 323
>gi|262369493|ref|ZP_06062821.1| uroporphyrinogen decarboxylase [Acinetobacter johnsonii SH046]
gi|262315561|gb|EEY96600.1| uroporphyrinogen decarboxylase [Acinetobacter johnsonii SH046]
Length = 356
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 192/350 (54%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +FL +C ++ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRATRAQAGDFLSLCKNNDFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP---NIDLFLNYL 120
RRY DAAILFSDIL + DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYELDAAILFSDILTVPDALGLGLYFEAGEGPKFHKAVRTEQDVANLPQFNAASDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVKTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + + +I++ ++R+
Sbjct: 182 LDRLADAVIDYLNAQIDAGAQAIQIFDSWGGALAHREYLEFSLKYMQKIVAGLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L+ T ++A GLDW+ PL+ A + + +QGNLDP L
Sbjct: 242 KVPVILFTKGGGQWLEPM-VATGADAFGLDWTTPLNVARQTVAGRAALQGNLDPATLYGS 300
Query: 298 NQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ ++ A+LD +G ++ NLGHGIT VDP+N + TV
Sbjct: 301 HETIVKATKAMLDDAYAGGEKTGYVANLGHGITQWVDPENPKAFIDTVHE 350
>gi|254444527|ref|ZP_05058003.1| uroporphyrinogen decarboxylase [Verrucomicrobiae bacterium DG1235]
gi|198258835|gb|EDY83143.1| uroporphyrinogen decarboxylase [Verrucomicrobiae bacterium DG1235]
Length = 345
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 194/341 (56%), Gaps = 7/341 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
KQ+ L L ++ PPIW+MRQAGRYLPEYR +++K+ +FL + TPE +E+T+QP+R
Sbjct: 4 KQRFLAALDCQPLDRPPIWVMRQAGRYLPEYRALKEKY-SFLQLAQTPELALEVTMQPLR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ DAAILFSDILVI +A+G+ F E G MD + D L +
Sbjct: 63 RFPLDAAILFSDILVIPEAMGQGYHFREQGGIGMDYTLESRAQIEKLTTDTIEEKLDYVA 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ ++ +L L+GF G+PWT+A+YM+ GG K+ + + YQ+ F L++ +
Sbjct: 123 QALRLIDAELDGSKMLLGFGGSPWTLATYMLEGGSSKNFSKVKALFYQDRATFELLMEKI 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
SD Y Q AG D IQIFD+ G L H++E + + + +II AVR + P I
Sbjct: 183 SDALITYFRMQKAAGADAIQIFDSWGGILAGHDYEAASLKWIRKIIDAVREEIP---MII 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+AKG L + AI +DW++P+ A ++ +QGNLDP+ L ++ +
Sbjct: 240 YAKGTAPQLAR-QAACSPKAIAVDWTIPIEEAANQVPSHIAIQGNLDPVLLDTEPSIVRE 298
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
ILD + S P IFNLGHGI P +N+ LV+TV +
Sbjct: 299 NTQRILDAMKSRPGHIFNLGHGILPTARIENMETLVETVTT 339
>gi|148653397|ref|YP_001280490.1| uroporphyrinogen decarboxylase [Psychrobacter sp. PRwf-1]
gi|172048531|sp|A5WFU9|DCUP_PSYWF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148572481|gb|ABQ94540.1| uroporphyrinogen decarboxylase [Psychrobacter sp. PRwf-1]
Length = 368
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 195/351 (55%), Gaps = 9/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L+ L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+T+QP+
Sbjct: 19 KNDRLLKALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTMQPL 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY DAAILFSDIL I DA+G + F EGP+ E + L +
Sbjct: 79 RRYELDAAILFSDILTIPDAMGLGLYFETGEGPKFKRTLRTEADFNQLEAFNAADSLSYV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +RK+L + L GF G+ WT+A+YMI GG KD+ + Y + +LD
Sbjct: 139 MDAVTSIRKELNGKVPLFGFSGSAWTLATYMIEGGSSKDYRYTKGLLYSKPEFLHQILDH 198
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ +YL AQI AG ++Q+FD+ G L +F ++ + R+++ +++++P +
Sbjct: 199 ITTAIIDYLDAQIVAGAQIVQLFDSWGGALAHRQFAEFSHKYNKRVVAELKQRHPEVPVV 258
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG----PVQGNLDPMRLVVGNQ 299
F KG G L + + ++++ +GLDWS+PL A + G VQGNLDP L +
Sbjct: 259 VFTKGGGLWL-DVQMDSEADCLGLDWSMPLDKARAILATGKRKIAVQGNLDPATLYGSPE 317
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ VNA+LD +G +I NLGHGIT VDPKN V V K+
Sbjct: 318 LIRQSVNAMLDDAYAGGEKTGYIANLGHGITQWVDPKNAGVFVDAVHEYKL 368
>gi|170719579|ref|YP_001747267.1| uroporphyrinogen decarboxylase [Pseudomonas putida W619]
gi|229889846|sp|B1J2J9|DCUP_PSEPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169757582|gb|ACA70898.1| uroporphyrinogen decarboxylase [Pseudomonas putida W619]
Length = 354
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 194/338 (57%), Gaps = 11/338 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEI-YLLNPNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR + T +I LL P+ L Y
Sbjct: 65 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALLIPDPQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 KVPVILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAK 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + + V IL G G +FNLGHGITP+VDP++
Sbjct: 301 PEAIRNEVARILASYGKGTGHVFNLGHGITPEVDPEHA 338
>gi|331005315|ref|ZP_08328704.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC1989]
gi|330420891|gb|EGG95168.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC1989]
Length = 354
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 194/338 (57%), Gaps = 10/338 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALARQPVDRTPVWMMRQAGRYLPEYRASRAKAGDFMGLCGNPEMACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYL 120
RY+ DAAILFSDIL I DA+G + F EGP+ T +I L P +D + L
Sbjct: 65 DRYSQIDAAILFSDILTIPDAMGLGLYFETGEGPKFKKTVHTAADIEAL-PVVDTRSD-L 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S++RK+L + LIGF G+PWT+A+YM+ GG KD+ + + YQ+ F L
Sbjct: 123 SYVTDAVSLIRKELNGRVPLIGFSGSPWTLATYMVEGGSSKDYARTKELMYQHPEVFQLL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L +YL AQI AG +QIFD+ G L H + Y+ + RI+ + ++
Sbjct: 183 IDKLVASITDYLNAQILAGAQAVQIFDSWGGALSHHAYHQYSLAPMQRIVDGLIKENEGR 242
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L + T ++A+GLDW+ +S+A ++ + +QGN+DP L
Sbjct: 243 RVPVILFTKGGGQWLPSLAN-TGADALGLDWTTDISYARQQVGDQVALQGNMDPAILYTN 301
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
+ + V IL G G +FNLGHG+TPQ P+NV
Sbjct: 302 PARIREEVATILAAYGKGNGHVFNLGHGVTPQAKPENV 339
>gi|255021651|ref|ZP_05293693.1| Uroporphyrinogen III decarboxylase [Acidithiobacillus caldus ATCC
51756]
gi|254968911|gb|EET26431.1| Uroporphyrinogen III decarboxylase [Acidithiobacillus caldus ATCC
51756]
Length = 353
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 194/333 (58%), Gaps = 20/333 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYR R + K+FL +C TPE E+TLQP++R+ DAAILFSDIL I
Sbjct: 24 PIWLMRQAGRYLPEYRATRARAKDFLTLCSTPELACEVTLQPVQRFPLDAAILFSDILTI 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G +++F++ EGP P+ T+ I L P+ + L Y + ++ ++R +L
Sbjct: 84 PHAMGMDLQFLDGEGPVFSSPLRDTKAIRALPVPDPETELRY---VMDAVRLIRHELAGR 140
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF G+PWT+A YMI G +D + Y + LLD L A+YL AQI
Sbjct: 141 IPLIGFAGSPWTLACYMIEGRGSRDFQHIKAMLYSDPELLEQLLDTLVRAVAQYLNAQIR 200
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + ++ + + RIISA+ R + + I F KG G L+
Sbjct: 201 AGAQAVMLFDSWGGALTSAAYRRFSLKPMTRIISALERTGSDGQKVPVILFTKGGGNWLE 260
Query: 255 NYRRLTDSNA--IGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAIL 309
+ DS A +GLDW+V + A ++ GP +QGNLDPM L ++++ AIL
Sbjct: 261 A---MADSGADVLGLDWTVDMGEA--RRRLGPALALQGNLDPMALYGSPELLVQETQAIL 315
Query: 310 DVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ G IFNLGHGITPQ + V LV+TV
Sbjct: 316 ESHGPQAGHIFNLGHGITPQTPVEQVARLVETV 348
>gi|307543678|ref|YP_003896157.1| uroporphyrinogen decarboxylase [Halomonas elongata DSM 2581]
gi|307215702|emb|CBV40972.1| uroporphyrinogen decarboxylase [Halomonas elongata DSM 2581]
Length = 358
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 201/352 (57%), Gaps = 15/352 (4%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ER + ++L L ++ P+W+MRQAGRYLPEYR++R + +F+D+C +
Sbjct: 1 MSERMELENDRLLRALARQPVDRTPVWMMRQAGRYLPEYREVRAQAGSFMDLCRDRDRAC 60
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNI 113
E+TLQP+ RY DAAILFSDIL I DA+G + F EGP+ P+ T E L P+
Sbjct: 61 EVTLQPLERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKPVRTPEAVEALSVPDA 120
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ L+Y + +++ +R++L + LIGF G+PWT+A+YM+ G KD + Y
Sbjct: 121 ERDLDY---VMNAVATIRRELNGRVPLIGFSGSPWTLATYMVEGASSKDFRHVKAMLYDT 177
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ LLD L+ +YL AQI AG V+QIFDT G L +E ++ R + +I+ +
Sbjct: 178 PDTMHRLLDLLARAVTDYLNAQIRAGAQVVQIFDTWGGALSTPAYEAFSLRYMKQIVDGL 237
Query: 234 RRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLD 290
R+ + I F K G L+ + + ++A+GLDWS LS A + + +QGNLD
Sbjct: 238 IREREGRRVPVILFTKNGGQWLEA-QADSGADALGLDWSTELSGARARVGQRVALQGNLD 296
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P L + + D V IL GSGP +FNLGHGI+ DP+ V V+ +
Sbjct: 297 PNVLFAHPRAIRDEVARILASYGSGPGHVFNLGHGISQFTDPERVTAFVEAL 348
>gi|213514810|ref|NP_001133714.1| Uroporphyrinogen decarboxylase [Salmo salar]
gi|209155050|gb|ACI33757.1| Uroporphyrinogen decarboxylase [Salmo salar]
Length = 368
Score = 236 bits (601), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 196/332 (59%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPE+R+ R K+F C +P ELTLQP+RR+ FDAAI+FSDILVI
Sbjct: 33 PVWCMRQAGRYLPEFRESRAG-KDFFATCRSPAACCELTLQPLRRFPFDAAIIFSDILVI 91
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDL--FLNYLLPIFQSISILRKKLPN 136
A+G +V+ V +GP DP+ E + LL +D+ L Y +F++I++ R KL
Sbjct: 92 PQAMGMDVQMVAGKGPTFPDPLKEPEDLLLLQSKVDVNKELGY---VFKAITLTRHKLEG 148
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAPWT+ +YMI GG + + + Y++ A + LL L+D+ EYL+ Q+
Sbjct: 149 KVPLIGFTGAPWTLMTYMIEGGGSTTQSKAKRWLYRHPEASHQLLKMLTDIIVEYLLGQV 208
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIIS-AVRRKYPNAKFISFAKGAGYM 252
AG +Q+F++HAGCLG EF ++ R + R + ++ + I FAK Y
Sbjct: 209 AAGAQALQVFESHAGCLGPVEFREFSLPYLRDIARKVKDQLKESGQDVPLIVFAKDGHYG 268
Query: 253 LKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L++ + + +GLDW+V P S + +QGN+DP L + + + V +L+
Sbjct: 269 LEDLSQ-SHYEVVGLDWTVDPRSARERTGGKVSLQGNMDPCALYAPKERISEIVKKMLEG 327
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 328 FGTRGYIANLGHGLYPDMDPENVGAFVEAVHT 359
>gi|308321680|gb|ADO27991.1| uroporphyrinogen decarboxylase [Ictalurus furcatus]
Length = 369
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/350 (37%), Positives = 202/350 (57%), Gaps = 15/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G + P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 16 KNDTFLRAARGEEVEHVPVWCMRQAGRYLPEFREFRAG-KDFFETCRSPEDCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLL 121
RR+ FDAAI+FSDILV+ ALG +V+ V +GP +P+ ++ L +D+ + L
Sbjct: 75 RRFPFDAAIIFSDILVVPQALGMDVQMVAGKGPTFPEPLKEPDDLQRLRSKVDV-ASELG 133
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++I++ R KL + LIGF GAPWT+ SYMI G H + + + Y++ A + LL
Sbjct: 134 YVFRAITLTRHKLEGKVPLIGFSGAPWTLMSYMIESGGSTTHSKAKRWLYRHPEASHALL 193
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP--- 238
L+DV +YL+ Q+ AG +Q+F++HAGCLG EF+ +A + I V+ +
Sbjct: 194 KRLTDVIVDYLLGQVKAGAQALQVFESHAGCLGPVEFKVFALPYLRDIARRVKDRLKESG 253
Query: 239 --NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMR 293
N I FAK Y L++ + + +GLDW++ A Q+ G +QGN DP
Sbjct: 254 LDNVPMIVFAKDGHYALEDLSQ-SHYEVVGLDWTIDPCVA--RQRTGGKVSLQGNTDPCA 310
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + V +++ G+ +I NLGHG+ P +DP++V V+ V +
Sbjct: 311 LYATKECISEIVKTMVEAFGTRGYIANLGHGLYPDMDPESVGAFVEAVHT 360
>gi|239502498|ref|ZP_04661808.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB900]
Length = 357
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PLS A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLSTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|302381477|ref|YP_003817300.1| uroporphyrinogen decarboxylase [Brevundimonas subvibrioides ATCC
15264]
gi|302192105|gb|ADK99676.1| uroporphyrinogen decarboxylase [Brevundimonas subvibrioides ATCC
15264]
Length = 359
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 188/342 (54%), Gaps = 6/342 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ VLQG + PP+W MRQAGRYLPEYR +R + +F+ C PE E TLQP+RR+
Sbjct: 20 SLIRVLQGETLERPPVWFMRQAGRYLPEYRALRAEAPDFIAFCLNPEMAAEATLQPMRRF 79
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDAAI+F+DIL+I ALG++V F EGPR+ + + + + + YL + Q+
Sbjct: 80 GFDAAIVFADILLIPQALGQDVWFETGEGPRLGLMPS--VGRMQELAEGAGQYLHQVGQT 137
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGF----IKDHGQNRVFAYQNSRAFNWLLD 182
+S++R +L LIGF GAPWTVA+YM+ G + R +AY + +L
Sbjct: 138 LSLVRSQLEPERALIGFAGAPWTVATYMLDGHHNTIGKGERATARSYAYAEPEKVDEVLA 197
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + +A YL Q AG D ++IF++ A L + FE + ++ VR
Sbjct: 198 VLVEATARYLKMQADAGADALKIFESWAEGLPDDLFERLVLKPHQALVRRVRELGVTVPL 257
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F +G+ Y R D + LD + L +Q P+QG LDP+ L VG +
Sbjct: 258 IGFPRGSALHADRYAREVDVQGVALDTACSLERGKLVQAIKPIQGALDPLLLRVGGAALD 317
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ +++ GSGP+IFNLGHGI P V +V ++K + ++
Sbjct: 318 RRVDQLVEAWGSGPWIFNLGHGILPDVPIAHVEQVLKRIGAQ 359
>gi|162312106|ref|NP_588085.2| uroporphyrinogen decarboxylase Hem12 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|118572638|sp|Q9USJ5|DCUP_SCHPO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109450946|emb|CAB60679.2| uroporphyrinogen decarboxylase Hem12 (predicted)
[Schizosaccharomyces pombe]
Length = 355
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/344 (40%), Positives = 199/344 (57%), Gaps = 24/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP+W+MRQAGRYLPEY ++R K ++F +MC TPE ELTLQP+ R+
Sbjct: 6 ILRAAKGEEVERPPVWIMRQAGRYLPEYHKLRAK-QSFFEMCQTPETACELTLQPVTRFK 64
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLL--NPNIDLFLNYLL 121
DAAI+FSDILVI ALG V +E +GP + ++I LL PNI L Y++
Sbjct: 65 GLLDAAIIFSDILVIPQALGMQVVMLEQKGPHFPKPLVVPEDIDLLEKTPNISAKLGYVM 124
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+IS+ R+KL + L+GF GAPWT+ +YMI GG K + + + ++ A + LL
Sbjct: 125 ---DAISLTREKLDGQVPLMGFSGAPWTIMAYMIEGGGSKTFAKAKSWLFRYPEASHKLL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
++D + YLI Q++AG ++QIFD+ AG L +F YA + RI V++ K
Sbjct: 182 KIITDATVSYLIQQVYAGAQLLQIFDSWAGELSPEDFTEYAYPYLVRICQEVKQHLKKKK 241
Query: 242 -----FISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV--QGNLDPM 292
I FAKGA Y + +L DS + IGLDW+V A+ ++ V QGNLDP
Sbjct: 242 RDEVPMIVFAKGAWYAID---QLCDSGYDVIGLDWTVSPKEAVRIRGNRRVTFQGNLDPN 298
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L +++ ++ G G +I NLGHGITP V+P +V
Sbjct: 299 ILYGTREIIEARTKEMIQDFGGGKQGYIINLGHGITPGVNPDDV 342
>gi|104779618|ref|YP_606116.1| uroporphyrinogen decarboxylase [Pseudomonas entomophila L48]
gi|166234273|sp|Q1IGA3|DCUP_PSEE4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|95108605|emb|CAK13299.1| uroporphyrinogen decarboxylase [Pseudomonas entomophila L48]
Length = 354
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 193/340 (56%), Gaps = 15/340 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVISTLADIEALPIPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + V IL G G +FNLGHGITP+VDP++
Sbjct: 299 AKPEAIRKEVARILASYGKGSGHVFNLGHGITPEVDPEHA 338
>gi|196008283|ref|XP_002114007.1| hypothetical protein TRIADDRAFT_27497 [Trichoplax adhaerens]
gi|190583026|gb|EDV23097.1| hypothetical protein TRIADDRAFT_27497 [Trichoplax adhaerens]
Length = 370
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 195/346 (56%), Gaps = 15/346 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL V +G P+W MRQAGRYLPE+R++R + +F +C TP E+TLQPIRR+N
Sbjct: 22 ILRVARGQHTEVIPVWTMRQAGRYLPEFREVRSQ-NDFFTVCRTPSLACEVTLQPIRRFN 80
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDL--FLNYLLPI 123
DAAI+FSDILV+ ALG N+ + +GP P+ + ++ L+ NID+ L Y +
Sbjct: 81 LDAAIIFSDILVVPQALGMNIEMIPGKGPIFTSPLESPDDLKELDRNIDVDERLGY---V 137
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I++ R KL + LIGF G PWT+ +YMI GG + + + Y+ A + LL
Sbjct: 138 FDAITLTRHKLKGQVPLIGFAGGPWTLMAYMIEGGGSSTMSKAKKWLYRYEEASHQLLRL 197
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF- 242
L DV EYL+ Q+ AG ++Q+F++HAG LG F+ Y+ + +I V+ AK
Sbjct: 198 LVDVIVEYLVGQVKAGAQLLQVFESHAGILGPDMFDKYSLTYLQQICQKVKHNLEAAKLE 257
Query: 243 ----ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I FAKGA Y L + + +G+DW++ A ++ E +QGNLDP L
Sbjct: 258 VVPMIVFAKGAHYALHQLSNI-GYDVVGMDWTIDPEVARNKIGHEVTIQGNLDPCTLYAS 316
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + ++ G+ +I NLGHGI P +P + V+TV
Sbjct: 317 KTELEEKIQKMVKKFGAQRYIANLGHGIYPDAEPAQLDFFVRTVHE 362
>gi|26991750|ref|NP_747175.1| uroporphyrinogen decarboxylase [Pseudomonas putida KT2440]
gi|38257478|sp|Q88CV6|DCUP_PSEPK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|24986857|gb|AAN70639.1|AE016707_9 uroporphyrinogen decarboxylase [Pseudomonas putida KT2440]
Length = 354
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 193/347 (55%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 299 AKPEAIRKEVARILASYGHGTGHVFNLGHGITPEVDPEHAGAFINAV 345
>gi|93006505|ref|YP_580942.1| uroporphyrinogen decarboxylase [Psychrobacter cryohalolentis K5]
gi|122415128|sp|Q1QA45|DCUP_PSYCK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|92394183|gb|ABE75458.1| uroporphyrinogen decarboxylase [Psychrobacter cryohalolentis K5]
Length = 378
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 203/365 (55%), Gaps = 26/365 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+TLQP+
Sbjct: 18 KNDRLLRALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL--FLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI Q P +D+ L+Y
Sbjct: 78 RRYDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKHPIRQQADLDRLPVLDVNDSLDY- 136
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +R L + L GF G+PWT+A+YMI GG KD+ + F Y N + L
Sbjct: 137 --VMRAVTSIRTALNGQVPLFGFSGSPWTLATYMIEGGSSKDYRYTKGFLYSNPDFLHQL 194
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ +YL AQ+ AG ++QIFD+ G LG +F +++ RI++ ++ ++P
Sbjct: 195 LDKLATSVIDYLDAQVVAGAQILQIFDSWGGALGHRQFIDFSHAYNKRIVAELKVRHPEI 254
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE---------------LQKEGPV 285
+ F KG G L + + ++++A+GLDW++P+ A + LQ +
Sbjct: 255 PVVLFTKGGGLWL-DIQADSEADALGLDWTMPIDRARQVLTESQRQLTKHHKKLQSSKAI 313
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILD-VLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
QGNLDP L + VNA+LD +G ++ NLGHGIT V+P N + V
Sbjct: 314 QGNLDPATLYGSPATIRAEVNAMLDSAYANGEKTGYVANLGHGITQWVNPDNAKVFIDAV 373
Query: 342 RSEKI 346
KI
Sbjct: 374 HDYKI 378
>gi|325294475|ref|YP_004280989.1| Uroporphyrinogen decarboxylase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064923|gb|ADY72930.1| Uroporphyrinogen decarboxylase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 346
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 205/344 (59%), Gaps = 14/344 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL+ +G + PIW+MRQAGRY YR+IR + +F+++C P+ E+TL PI
Sbjct: 2 KDHPILKAARGEKTDYTPIWIMRQAGRYSERYRKIRAQAGSFMELCKNPKLAAEVTLIPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-----TQEIYLLNPNIDLFLN 118
DAAILFSDILV + +G +V FVE +GP ++P +++ + P D L
Sbjct: 62 EEIGIDAAILFSDILVPLEKMGIDVSFVEGKGPILEPKAEKLEDVEKLKIPEPEKD--LP 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y+L ++I +++K+L + LIGF GAP+T+ASYM+ GG K++ + + ++
Sbjct: 120 YVL---ETIQLIKKRLTDR-PLIGFSGAPFTLASYMLEGGSSKNYIAAKSTMWNEPELWD 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L++ EYL +QI AGVD+IQIFD+ G L + ++E + RI++ ++++YP
Sbjct: 176 ALMSKLAETVIEYLSSQIKAGVDLIQIFDSWMGVLSKDDYEKFVFPYTERIVNELKKRYP 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F AG++L+ RL+ + IGLDW + FALE + + +QGNLDP+ L
Sbjct: 236 EIPIIHFGVNAGHLLEVNNRLS-VDVIGLDWKTEIPFALE-RIDKSIQGNLDPVTLFADE 293
Query: 299 QVMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+++ + V IL + L + IFNLGHGI P DPK LV TV
Sbjct: 294 KIIEERVRKILIEGLKARGHIFNLGHGILPPTDPKKAKFLVDTV 337
>gi|237798109|ref|ZP_04586570.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331020961|gb|EGI01018.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 354
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 195/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPVPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTSYLNGQIMAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGNKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 301 PEAIRKEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAV 345
>gi|167036113|ref|YP_001671344.1| uroporphyrinogen decarboxylase [Pseudomonas putida GB-1]
gi|189083014|sp|B0KN28|DCUP_PSEPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166862601|gb|ABZ01009.1| uroporphyrinogen decarboxylase [Pseudomonas putida GB-1]
Length = 354
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPIPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDRVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + V IL G G +FNLGHGITP+VDP++
Sbjct: 299 AKPEAIRQEVARILASYGQGTGHVFNLGHGITPEVDPEHA 338
>gi|66043681|ref|YP_233522.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
B728a]
gi|81308602|sp|Q4ZZD8|DCUP_PSEU2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|63254388|gb|AAY35484.1| Uroporphyrinogen decarboxylase HemE [Pseudomonas syringae pv.
syringae B728a]
gi|330971726|gb|EGH71792.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 354
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I+S + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVSGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|148235558|ref|NP_001084556.1| uroporphyrinogen decarboxylase [Xenopus laevis]
gi|46250159|gb|AAH68896.1| MGC83088 protein [Xenopus laevis]
Length = 367
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 193/343 (56%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+RR+
Sbjct: 21 LRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLRRFPL 79
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNYLLPIF 124
DAAI+FSDILVI ALG +R GP +P+ T Q++ L ++D+ L Y +F
Sbjct: 80 DAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLQKLRSSVDVSEELGY---VF 136
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I++ R KL + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL L
Sbjct: 137 RAITLTRHKLEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQL 196
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----N 239
+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 197 TDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLKDISRRVKHKLKAEGLNQ 256
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I FAK A Y L++ + +D +GLDW++ P K +QGN+DP L
Sbjct: 257 VPMIVFAKDAHYALEDLSQ-SDYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYASK 315
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 316 GDIEKTVKKMIEGFGRRGYIANLGHGLYPDMDPDHVGAFISAV 358
>gi|330877997|gb|EGH12146.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 354
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 195/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAV 345
>gi|307826270|ref|ZP_07656478.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
gi|307732675|gb|EFO03544.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
Length = 355
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 195/339 (57%), Gaps = 25/339 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR++R++ +FLD+C PE E+TLQP+RR++FDAAILFSDIL I
Sbjct: 22 PIWMMRQAGRYLPEYRKVREQAGSFLDLCTNPELACEVTLQPLRRFDFDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DA+G + F E EGP+ +P+ T ++ + +P DL + ++ ++RK L
Sbjct: 82 PDAMGLGLYFTEGEGPKFSNPVRTAADVNKLPIPDPETDLRY-----VVDAVRLIRKNLQ 136
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A+YM+ GG K + + Y+ + + +LD L+ A YL AQ
Sbjct: 137 GSVPLIGFSGSPWTLATYMVEGGSSKSFQKVKSMMYEQPKLMHVMLDKLAQSVAAYLNAQ 196
Query: 196 IHAGVDVIQIFDTHAGCLGEH---EFENYAARSVGRIISAV--RRKYPNAKFISFAKGAG 250
I AG + +FDT G L EF Y A+ V ++ ++ P I F KG G
Sbjct: 197 IEAGAQAVMLFDTWGGMLTTEDYVEFSLYYAKQVRALLKTTVDGQQIPT---ILFTKGGG 253
Query: 251 YMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
L+ + DS +A+GLDW + A + + +QGN+DP+ L +V+ + V
Sbjct: 254 LWLEA---MADSGYDALGLDWQTDMQQARARVGHQVALQGNMDPVALYASPEVITEKVKT 310
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL GSG +FNLGHGI P ++P +V +V V
Sbjct: 311 ILHKYGSGSGHVFNLGHGILPDMNPDHVKAMVDAVHEHS 349
>gi|330964730|gb|EGH64990.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 354
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLLREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|198415382|ref|XP_002127816.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
[Ciona intestinalis]
Length = 362
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/334 (37%), Positives = 194/334 (58%), Gaps = 16/334 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYL E++++R K +F +C TPE E+TLQP+RR DAAI+FSDILVI
Sbjct: 25 PVWAMRQAGRYLKEFQEVRAK-HDFFTVCRTPELACEVTLQPLRRMELDAAIIFSDILVI 83
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLN--PNIDLFLNYLLPIFQSISILRKKLPN 136
ALG V+ V +GP P+ +++ LN P++D L Y +F +I + R+KL
Sbjct: 84 PQALGMEVQMVPGKGPVFPKPLANPEDLKTLNQTPDVDKELGY---VFDAIKLTRQKLDG 140
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAPWT+ +YM+ GG + R + +++ LLD L+D + +YL+ Q+
Sbjct: 141 KVPLIGFSGAPWTLMAYMVDGGSSATFSKARSWLFRSPNESKALLDMLTDTTIKYLVNQV 200
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGY 251
AG +Q+F++HAG LG F ++ + +I + V+++ + I FAKGA Y
Sbjct: 201 RAGAQALQVFESHAGILGSSTFAKFSLPYLAKIATQVKKQLSDLGIQRVPLIIFAKGAHY 260
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
++ TD + I LDW++ + A E+ +K +QGNLDP L G + ++
Sbjct: 261 AIEELSA-TDYDVISLDWTMDVKRAREICAKKSKALQGNLDPAMLYAGVDEICSATKKMV 319
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G I NLGHG+ P +DP+++ V +V S
Sbjct: 320 EDFGVTGHIANLGHGMYPDLDPEHLKAFVNSVHS 353
>gi|254495633|ref|ZP_05108555.1| uroporphyrinogen decarboxylase [Legionella drancourtii LLAP12]
gi|254355203|gb|EET13816.1| uroporphyrinogen decarboxylase [Legionella drancourtii LLAP12]
Length = 362
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 199/342 (58%), Gaps = 13/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ L+ + PIW+MRQAGRYLPEYR+IR++ +FL +C PE E+TLQP+RRY
Sbjct: 20 IRALRRQPVERTPIWMMRQAGRYLPEYRKIREQAGDFLSLCKNPELACEVTLQPLRRYAM 79
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLN----PNIDLFLNYLLPI 123
DAAILFSDIL I DA+G + F E EGP + P+ Q+I + P++ L Y +
Sbjct: 80 DAAILFSDILTIPDAMGLGLYFSEGEGPCFNHPV--QDIQAIKNLQVPDVGDSLAY---V 134
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R+++P + LIGF G+PWT+A YM+ G +D + Y A + LL
Sbjct: 135 MNAVRLIRQEMPAELPLIGFAGSPWTLACYMVEGRSSRDFKRILKLIYTQPEAAHLLLHK 194
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ YL+ QI+AGVD + IFDT G L ++ ++ R + +II ++ +P+ I
Sbjct: 195 LALSVGNYLVEQINAGVDAVMIFDTWGGVLTPANYQEFSLRYMHQIIQYIKTTHPDVPVI 254
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG G L+ +T +A+GLDW+ L A + + + +QGNLDP L+ +
Sbjct: 255 LFTKGGGQWLEKM-LITGCDALGLDWTCDLGDARQRVGAQVALQGNLDPAVLLTSEHCVR 313
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +L G G +FNLGHGITP V P++V +V+ V
Sbjct: 314 EHVQKVLASFGHGSGHVFNLGHGITPDVPPEHVAAMVEAVHE 355
>gi|332973015|gb|EGK10954.1| uroporphyrinogen decarboxylase [Psychrobacter sp. 1501(2011)]
Length = 368
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 204/354 (57%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L+ L+ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E+T+QP+
Sbjct: 19 KNDRLLKALRFEEVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTMQPL 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F EGP+ T + L P N + L Y
Sbjct: 79 RRFDLDAAILFSDILTIPDAMGLGLYFETGEGPKFKRTLRTEADFNQLEPFNANDSLGY- 137
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ +RK+L + L GF G+ WT+A+YMI GG KD+ + Y + +
Sbjct: 138 --VMDAVTSIRKELNGLVPLFGFSGSAWTLATYMIEGGSSKDYRYTKGLLYSKPEFLHQI 195
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ +YL AQI AG ++Q+FD+ G L +F+ ++ + R++S +++++P+
Sbjct: 196 LDHITSAIIDYLDAQIVAGAQLVQLFDSWGGALAHRQFKEFSHKYNKRVVSELKQRHPDV 255
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA----LELQKEGPVQGNLDPMRLVV 296
+ F KG G L + + T+++ +GLDW++PL A + K+ VQGNLDP L
Sbjct: 256 PVVVFTKGGGLWL-DIQADTEADCLGLDWTMPLDKARAILAQSNKQIAVQGNLDPATLYG 314
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ VNA+LD +G ++ NLGHGIT V+P+N + V K+
Sbjct: 315 SPELIRQSVNAMLDDAYAGGVKTGYVANLGHGITQWVNPENAKVFIDAVHEYKL 368
>gi|313501050|gb|ADR62416.1| HemE [Pseudomonas putida BIRD-1]
Length = 354
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 193/347 (55%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAD-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 299 AKPEAIRKEVARILASYGHGTGHVFNLGHGITPEVDPEHAGVFISAV 345
>gi|71066057|ref|YP_264784.1| uroporphyrinogen decarboxylase [Psychrobacter arcticus 273-4]
gi|123648302|sp|Q4FRK8|DCUP_PSYA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71039042|gb|AAZ19350.1| putative uroporphyrinogen decarboxylase [Psychrobacter arcticus
273-4]
Length = 378
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 26/365 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+TLQP+
Sbjct: 18 KNDRLLRALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL--FLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI Q P +D+ L+Y
Sbjct: 78 RRYDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKHPIRQQADLDRLPVLDVNDSLDY- 136
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +R L + L GF G+PWT+A+YMI GG KD+ + F Y N + L
Sbjct: 137 --VMRAVTSIRTALNGQVPLFGFSGSPWTLATYMIEGGSSKDYRYTKGFLYSNPEFLHQL 194
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ +YL AQ+ AG ++QIFD+ G LG +F +++ RI++ ++ ++P
Sbjct: 195 LDKLATSVIDYLDAQVVAGAQILQIFDSWGGALGHRQFVDFSHAYNKRIVAELKVRHPEI 254
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE---------------LQKEGPV 285
+ F KG G L + + ++++A+GLDW++P+ A + L +
Sbjct: 255 PVVLFTKGGGLWL-DIQADSEADALGLDWTMPIDRARQVLTESQRQLTKQHKKLHSSKAI 313
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILD-VLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
QGNLDP L + VNA+LD +G ++ NLGHGIT V+P N + V
Sbjct: 314 QGNLDPATLYGSPATIRAEVNAMLDSAYANGEKTGYVANLGHGITQWVNPDNAKVFIDAV 373
Query: 342 RSEKI 346
KI
Sbjct: 374 HDYKI 378
>gi|148550149|ref|YP_001270251.1| uroporphyrinogen decarboxylase [Pseudomonas putida F1]
gi|166234275|sp|A5WAA7|DCUP_PSEP1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148514207|gb|ABQ81067.1| uroporphyrinogen decarboxylase [Pseudomonas putida F1]
Length = 354
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 191/340 (56%), Gaps = 15/340 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAD-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + V IL G G +FNLGHGITP+VDP++
Sbjct: 299 AKPEAIRKEVARILASYGHGTGHVFNLGHGITPEVDPEHA 338
>gi|301511180|ref|ZP_07236417.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB058]
Length = 357
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|189499267|ref|YP_001958737.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides BS1]
gi|238058015|sp|B3EL29|DCUP_CHLPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189494708|gb|ACE03256.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides BS1]
Length = 351
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 199/344 (57%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPVPRTPIWVMRQAGRYLPEYRAIREK-TDFLTLCKTPELATEVTIQPVDIIGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G NV +E++G R+ P ++ L+ P+I+ L Y++
Sbjct: 67 DAAIIFSDILVVNEAMGMNVEIIESKGIRLSPPIRSQVDIDRLIIPDINEKLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +K+L + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 ALRMTKKELDGRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V EYL+ QI AG D +QIFD+ A L E ++ +A + + AV+ KYP+ I F
Sbjct: 184 RVITEYLLMQIEAGADAVQIFDSWASALSEDDYREFALPYIKESVQAVKTKYPDTPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L + T +A+GL W++ +S A EL+ +QGN+DP L + +
Sbjct: 244 SKDCNTILSDIAD-TGCDAMGLGWNMDISKARAELKDRVTIQGNMDPTVLYGTHDKIRAE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL+ G +FNLGHGI P VDP+N+ LV V+ E
Sbjct: 303 AGKILERFGQHSECSGHVFNLGHGILPDVDPENLKCLVDFVKEE 346
>gi|330957031|gb|EGH57291.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 354
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 195/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR + +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSSLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 301 PEAIRKEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAV 345
>gi|189347814|ref|YP_001944343.1| uroporphyrinogen decarboxylase [Chlorobium limicola DSM 245]
gi|238058013|sp|B3EHV5|DCUP_CHLL2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189341961|gb|ACD91364.1| uroporphyrinogen decarboxylase [Chlorobium limicola DSM 245]
Length = 351
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELAAEVTIQPVDLMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILVI +A+G NV +E +G ++ P+ + L+ P+ID L Y +
Sbjct: 67 DAAIIFSDILVINEAMGMNVEIIETKGIKLSPVIRSKADIDKLIVPDIDEKLGY---VMD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 ALRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPQMAHLLLGKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + YL+ Q+ AG D IQIFD+ A L E ++ +A + + + AV+ KYP+ I F
Sbjct: 184 ETISAYLLKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVQAVKAKYPDIPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L + T +A+GL W + ++ A EL+ +QGNLDP L + +
Sbjct: 244 SKDCNTILSDIAD-TGCDAMGLGWGIDIAKARAELKDRVALQGNLDPTVLYGTPEKIKSE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L G S +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 303 AAKVLKQFGQHTESSGHVFNLGHGILPDVDPANLKLLVEFVKEE 346
>gi|169795244|ref|YP_001713037.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AYE]
gi|213158088|ref|YP_002320139.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB0057]
gi|215482782|ref|YP_002324983.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB307-0294]
gi|260556713|ref|ZP_05828931.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 19606]
gi|301347443|ref|ZP_07228184.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB056]
gi|301596122|ref|ZP_07241130.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB059]
gi|332854141|ref|ZP_08435199.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013150]
gi|332867907|ref|ZP_08437909.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013113]
gi|226723862|sp|B7GZK6|DCUP_ACIB3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723863|sp|B7I451|DCUP_ACIB5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058007|sp|B0VBT2|DCUP_ACIBY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169148171|emb|CAM86034.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AYE]
gi|213057248|gb|ACJ42150.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB0057]
gi|213987817|gb|ACJ58116.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB307-0294]
gi|260409972|gb|EEX03272.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 19606]
gi|332728197|gb|EGJ59583.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013150]
gi|332733680|gb|EGJ64838.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013113]
Length = 357
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|257483517|ref|ZP_05637558.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289623919|ref|ZP_06456873.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289648185|ref|ZP_06479528.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330865729|gb|EGH00438.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|331009599|gb|EGH89655.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 354
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|327270967|ref|XP_003220259.1| PREDICTED: uroporphyrinogen decarboxylase-like [Anolis
carolinensis]
Length = 369
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 197/351 (56%), Gaps = 15/351 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L QG P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 16 KNDTFLRAAQGEETEYTPVWCMRQAGRYLPEFRETRAA-QDFFATCRSPETCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLF--LNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ +++ L +D+ L Y
Sbjct: 75 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKGVEDLLKLRQKVDVAAELGY 134
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R +L + LIGF GAPWT+ SYMI GG + + + Y++ A +
Sbjct: 135 ---VFQAITLTRHRLEGKVPLIGFSGAPWTLMSYMIEGGGSNTMAKAKAWLYRHPEASHR 191
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--- 236
LL L+DV A+YL+ Q+ AG +Q+F++HAG LG +F + + I V+ K
Sbjct: 192 LLTLLADVIADYLVGQVAAGAQALQLFESHAGHLGPEQFSEFCLLYIRSIAKQVKTKLHE 251
Query: 237 --YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
P I FAK A Y L++ + + + IGLDW++ P + K+ +QGNLDP
Sbjct: 252 NAMPVVPLIIFAKDAHYALEDLAQ-SGYDVIGLDWTIRPEDARQRIGKDITLQGNLDPCA 310
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + + + V +LD G+ +I NLGHG+ P + P++V V V +
Sbjct: 311 LYAPKEKIGELVKRMLDGFGTQRYIANLGHGLYPDMSPEHVGAFVDAVHAH 361
>gi|238058022|sp|A3M795|DCUP_ACIBT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193077899|gb|ABO12789.2| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 17978]
Length = 357
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|88797641|ref|ZP_01113230.1| uroporphyrinogen decarboxylase [Reinekea sp. MED297]
gi|88779813|gb|EAR10999.1| uroporphyrinogen decarboxylase [Reinekea sp. MED297]
Length = 354
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 191/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEYR+ R + +FL +C + E+TLQP+
Sbjct: 5 QNDRFLKALLKEPVDRTPVWMMRQAGRYLPEYRETRSQAGDFLSLCKNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
RY DAAILFSDIL + DA+G + F EGP+ E L P +D L Y
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPKFKHTVRSEQDLSRLQTPKMDDELKY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R +L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVSTIRSELNGRVPLIGFTGSPWTLATYMVEGGSSKDFRHIKAMMYSQPDVLHEL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D +YL AQI AG +QIFD+ G LG + +++ + RII+ ++R++
Sbjct: 182 LSRLADTVTDYLNAQIDAGAQAVQIFDSWGGALGHQAYLDFSLAYMNRIIAGLKREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L+ + ++A+GLDW+ L+ A + + + +QGN+DP L
Sbjct: 242 KVPVILFTKGGGQWLEAMAD-SGADALGLDWTTSLTDARQRVGDKVALQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ D V IL GSG +FNLGHGI VDP + V+ V
Sbjct: 301 PDRIRDEVERILAEYGSGTGHVFNLGHGIQQFVDPDHAGAFVEAV 345
>gi|169632914|ref|YP_001706650.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii SDF]
gi|238058011|sp|B0VUQ9|DCUP_ACIBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169151706|emb|CAP00499.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii]
Length = 357
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|77456643|ref|YP_346148.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf0-1]
gi|123606251|sp|Q3KJ97|DCUP_PSEPF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77380646|gb|ABA72159.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf0-1]
Length = 355
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 196/349 (56%), Gaps = 16/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAQAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P+ DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A
Sbjct: 125 -----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 HLLLDKLAQSVTSYLNGQIQAGAQAVQIFDTWGGNLSAAAYQEFSLAYMKKIVSGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 DGRKVPVILFTKNGGLWLESIAE-AGADALGLDWTCDIGNARARVGDKVALQGNMDPTVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGITP+VDP++ ++ V
Sbjct: 299 YAKPEAIRTEVGRILASYGKGSGHVFNLGHGITPEVDPEHAGAFLRAVH 347
>gi|320322048|gb|EFW78144.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330846|gb|EFW86820.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330984721|gb|EGH82824.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 354
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|293609703|ref|ZP_06692005.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828155|gb|EFF86518.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 357
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 190/348 (54%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVTDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPM-ITTGADALGLDWTTPLNTARNIVSGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTV 348
>gi|89886127|ref|NP_001011486.2| uroporphyrinogen decarboxylase [Xenopus (Silurana) tropicalis]
gi|89267848|emb|CAJ82884.1| uroporphyrinogen decarboxylase [Xenopus (Silurana) tropicalis]
Length = 372
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 193/343 (56%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+RR+
Sbjct: 26 LRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLRRFPL 84
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNYLLPIF 124
DAAI+FSDILVI ALG +R GP +P+ T Q+++ L ++D+ L Y +F
Sbjct: 85 DAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEELGY---VF 141
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL L
Sbjct: 142 HAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQL 201
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----N 239
+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 202 TDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAEGLDQ 261
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I FAK A Y L++ + + +GLDW++ P K +QGN+DP L
Sbjct: 262 VPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYASK 320
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 321 EDIEKTVKKMIEGFGQRGYIANLGHGLYPDMDPDHVGAFISAV 363
>gi|260549742|ref|ZP_05823959.1| uroporphyrinogen decarboxylase [Acinetobacter sp. RUH2624]
gi|260407259|gb|EEX00735.1| uroporphyrinogen decarboxylase [Acinetobacter sp. RUH2624]
Length = 357
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|325275686|ref|ZP_08141575.1| uroporphyrinogen decarboxylase [Pseudomonas sp. TJI-51]
gi|324099172|gb|EGB97129.1| uroporphyrinogen decarboxylase [Pseudomonas sp. TJI-51]
Length = 354
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLN 118
RY DAAILFSDIL I DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRKVVSTPADIEALPVPDPQKDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A +
Sbjct: 124 ----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 LLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGLWLESIAE-AGADALGLDWTCDIGDARRRVGDKVALQGNMDPTVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
+ + V IL G G +FNLGHGITP+VDP +
Sbjct: 299 AKPEAIRQEVARILASYGHGNGHVFNLGHGITPEVDPAHA 338
>gi|242021862|ref|XP_002431362.1| Uroporphyrinogen decarboxylase, putative [Pediculus humanus
corporis]
gi|212516630|gb|EEB18624.1| Uroporphyrinogen decarboxylase, putative [Pediculus humanus
corporis]
Length = 346
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 196/340 (57%), Gaps = 7/340 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L + G ++ P+W+MRQAGRYLPE+R+IR K +F +C TPE E+T+QPIRR+
Sbjct: 10 RLLRAINGEEVDKIPVWIMRQAGRYLPEFREIRSK-HDFFTICTTPELACEVTIQPIRRF 68
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIF 124
+ DAAI+FSDILVI ALG V GP DP+ + +++ LN N D+ L ++
Sbjct: 69 DLDAAIIFSDILVIPQALGMKVEMKPGVGPFFPDPLESPKDVEKLNFNADI-KTELKYVY 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I++ R L + LIGF GAPWT+ +YMI GG K + + + YQ LL+ +
Sbjct: 128 DAITLTRNSLEGKVPLIGFAGAPWTLFAYMIEGGTSKTMSKAKKWLYQWPEKSKILLNVI 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D ++LI Q AG V+Q+F++HA LG F N++ + +I+ V+++ + I
Sbjct: 188 ADAVTKHLINQAKAGAQVLQVFESHAEYLGLDLFNNFSLPFLQKIVLTVKQEI-DVPLII 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KGA Y + + + NA+G+DW++ A +QGNLDP L + +I+
Sbjct: 247 FTKGAHYAINELSK-SGYNAVGIDWTIEPEIARNKSDNSITLQGNLDPCALYLPKDELIE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ G +I NLGHGI P DP NV + T+ S
Sbjct: 306 KTKLMIEKFGKKNYIANLGHGIYPDTDPDNVKVFIDTIHS 345
>gi|88607724|ref|YP_504657.1| uroporphyrinogen decarboxylase [Anaplasma phagocytophilum HZ]
gi|88598787|gb|ABD44257.1| uroporphyrinogen decarboxylase [Anaplasma phagocytophilum HZ]
Length = 343
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 188/325 (57%), Gaps = 12/325 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY+++ ++FL+ CYTPE E+TLQPI+R++ DAAI+FSDI+ +
Sbjct: 28 PIWFMRQAGRYLPEYQKVMAHVQDFLEACYTPEIVEEVTLQPIQRFDLDAAIIFSDIMTV 87
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F GP+++ T +E+ L + L + P+ +SI +RK L + +L
Sbjct: 88 PDALGFEVVFKRGYGPQINAKTRREVTL-----EWSLEKVSPVLESIKRVRKSLSPNKSL 142
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS--RAFNWLLDFLSDVSAEYLIAQIHA 198
IGF G+PWTVA+Y++ ++ +FA S + L+D + + YL Q+
Sbjct: 143 IGFAGSPWTVATYILE----QEKKITDIFALHRSGDNSVAKLIDEIVSFTTVYLKKQVEY 198
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD++Q+FD++A L FE + RI+ +R+ +P+ I F KGAG + +Y
Sbjct: 199 GVDILQLFDSNASGLPVDLFETFIVEPTQRIVKELRKHHPSIPIIGFPKGAGVLYTHYAL 258
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
T +A+ +D+S+P + ++ G VQGNLDP L + + I+ L P I
Sbjct: 259 TTGISAVSVDYSIPSQW-IKNNISGVVQGNLDPFLLAYDVEGALKCAGEIIADLRDKPLI 317
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHGI P NV LV VRS
Sbjct: 318 FNLGHGIIPPTPVDNVYRLVDFVRS 342
>gi|57032914|gb|AAH88815.1| urod protein [Xenopus (Silurana) tropicalis]
Length = 367
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 194/343 (56%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+RR+
Sbjct: 21 LRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLRRFPL 79
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNYLLPIF 124
DAAI+FSDILVI ALG +R GP +P+ T Q+++ L ++D+ L Y +F
Sbjct: 80 DAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEELGY---VF 136
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL L
Sbjct: 137 RAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQL 196
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----N 239
+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 197 TDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAEGLDQ 256
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I FAK A Y L++ + + +GLDW++ P K +QGN+DP L
Sbjct: 257 VPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYASK 315
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 316 EDIEKTVKKMIEGFGQRGYIANLGHGLYPDMDPDHVGAFISAV 358
>gi|302189481|ref|ZP_07266154.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
642]
Length = 354
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|119475134|ref|ZP_01615487.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2143]
gi|119451337|gb|EAW32570.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2143]
Length = 354
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 197/352 (55%), Gaps = 17/352 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + L L ++ P+W+MRQAGRYLPEYR R K +F+ + PE+ E+T+
Sbjct: 1 MTLKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLMMNPEFACEVTM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDL 115
QP+ RY DAAILFSDIL I DA+G + F EGPR + + + +P+ DL
Sbjct: 61 QPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRKTIRTAADVEALAIPDPHKDL 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++S + K+L + LIGF G+PWT+A+YM+ GG KDH + A+ +
Sbjct: 121 GY-----VMDAVSTIHKELNGRVPLIGFSGSPWTLATYMVEGGSSKDHRIVKALAFNEPQ 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD L+ YL QI AG + +QIFDT G L + ++ + +I+ + R
Sbjct: 176 TMHGLLDKLAQSVTSYLNGQIMAGAEAVQIFDTWGGALSHAAYREFSLSYMQKIVDGLIR 235
Query: 236 KYPNAKFIS---FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
++ N + I F K G L+ T + AIGLDW+ +S A ++ +QGN+DP
Sbjct: 236 EH-NGQVIPVILFTKNGGQWLQAIAD-TGATAIGLDWTTDISSARRQVGDRVALQGNMDP 293
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L Q + + V++IL+ G+G +FNLGHGITP+V+P+N +++V
Sbjct: 294 TMLYASPQRIREEVSSILEGYGNGSGHVFNLGHGITPEVNPENARVFIESVH 345
>gi|330951313|gb|EGH51573.1| uroporphyrinogen decarboxylase [Pseudomonas syringae Cit 7]
Length = 354
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|71733761|ref|YP_272707.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123638607|sp|Q48PG2|DCUP_PSE14 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71554314|gb|AAZ33525.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 354
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LDKLAQSVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + +
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAI 345
>gi|157738012|ref|YP_001490696.1| uroporphyrinogen decarboxylase [Arcobacter butzleri RM4018]
gi|172045653|sp|A8EVQ3|DCUP_ARCB4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157699866|gb|ABV68026.1| uroporphyrinogen decarboxylase [Arcobacter butzleri RM4018]
Length = 346
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 188/324 (58%), Gaps = 3/324 (0%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R K NFL++C+ PE E+T+QP+ DAAILFSDILV+
Sbjct: 18 PVWMMRQAGRYLPEYMEVRAKAGNFLNLCHNPELAAEVTIQPLDIVGVDAAILFSDILVV 77
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+ +G + F++ EGP D PI T+ + N L ++++I IL+++LP
Sbjct: 78 PNEMGMKLDFLKGEGPVFDKPIKTEADLDALIGGEEAANKLTYVYETIKILKQRLPQDKA 137
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAPWT+A+YMI G K + + Y N + +L ++DV Y+ QI AG
Sbjct: 138 LIGFTGAPWTLATYMIEGQGTKTYNLCKKMMYSNPEFLHKILRRVTDVVKFYMEKQIEAG 197
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VDV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG ++
Sbjct: 198 VDVVQIFDSWAAAIEPSKYDEFSWKYMVEIAEYLKEKYPHIPVIMFPKGIAAFIERGLVY 257
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+ + G+DW P++ A E L ++ +QGN++P RL + V I +++G I
Sbjct: 258 GNFDVFGVDWGTPMALAKEKLGEKYVLQGNMEPCRL-YSKEATTMCVEGIQNIMGGNGHI 316
Query: 319 FNLGHGITPQVDPKNVLDLVKTVR 342
FNLGHGI P V +N + VK +
Sbjct: 317 FNLGHGILPDVPVENAIHFVKECQ 340
>gi|110597225|ref|ZP_01385513.1| uroporphyrinogen decarboxylase [Chlorobium ferrooxidans DSM 13031]
gi|110341061|gb|EAT59529.1| uroporphyrinogen decarboxylase [Chlorobium ferrooxidans DSM 13031]
Length = 350
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 196/343 (57%), Gaps = 12/343 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELATEVTIQPVELMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILVI +A+G NV +E++G +++PI +Q L+ P+ID L Y + +
Sbjct: 67 DAAIIFSDILVINEAMGMNVEIIESKGIKLNPIRSQADIDKLIVPDIDEKLGY---VMDA 123
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + LL +S
Sbjct: 124 LRMTKKELDNRVPLIGFTGAAWTLFTYAVEGGGSKNYAYAKKMMYREPAMAHALLGKISG 183
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y++ QI AG D IQIFD+ A L E ++ YA + + A++ K+P+ I F+
Sbjct: 184 VITAYVLKQIEAGADAIQIFDSWASALSEDDYRVYALPYIKETVQAIKAKHPDTPVIVFS 243
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
K +L T +A+GL W + + A EL +QGNLDP L ++
Sbjct: 244 KDCNTILSEIAD-TGCDAMGLGWGMDIGKARAELNDRVALQGNLDPTVLYGTPALIKSEA 302
Query: 306 NAILDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL G +FNLGHGI P +DP+N+ LV+ V+ E
Sbjct: 303 SKILKSFGQHTEHSGHVFNLGHGILPDMDPENLKLLVEFVKEE 345
>gi|325122921|gb|ADY82444.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus PHEA-2]
Length = 357
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 190/348 (54%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPM-ITTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTV 348
>gi|262372119|ref|ZP_06065398.1| uroporphyrinogen decarboxylase [Acinetobacter junii SH205]
gi|262312144|gb|EEY93229.1| uroporphyrinogen decarboxylase [Acinetobacter junii SH205]
Length = 357
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 190/348 (54%), Gaps = 10/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRATRSQAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN-PNIDLFLNYLLP 122
RRY+ DAAILFSDIL + DALG + F EGP+ E + N P ++ + L
Sbjct: 65 RRYHLDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNSKSD-LAY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + LLD
Sbjct: 124 VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKNMMYAQPEVLHALLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK- 241
L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+ +
Sbjct: 184 HLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDGRRI 243
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ T ++A GLDW+ PL A E + +QGNLDP L
Sbjct: 244 PIIVFTKGGGQWLETMLT-TGADAFGLDWTTPLYTAREVVNGRAALQGNLDPAVLYGSAA 302
Query: 300 VMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V A+L D +G +I NLGHGIT VDP V TV +
Sbjct: 303 SIEKSVKAMLDDAYKNGEKTGYIANLGHGITQWVDPAQPKIFVDTVHA 350
>gi|289676466|ref|ZP_06497356.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
FF5]
Length = 354
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVISYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|300115530|ref|YP_003762105.1| uroporphyrinogen decarboxylase [Nitrosococcus watsonii C-113]
gi|299541467|gb|ADJ29784.1| uroporphyrinogen decarboxylase [Nitrosococcus watsonii C-113]
Length = 356
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 198/345 (57%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR++R K +FL +C TPE E+TLQP+
Sbjct: 5 KNDRFLRALLRQPVDRTPVWIMRQAGRYLPEYREVRAKAGDFLTLCTTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT--QEIYLLNPNIDLFLNYL 120
R++ DAAI+FSDIL I A+G + F + EGPR + P+ T Q L P+ + L Y
Sbjct: 65 HRFDLDAAIIFSDILTIPHAMGLGLYFSKGEGPRFERPVRTNNQVSALGVPDPESDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + R++L + LIGF G+PWT+A YM+ GG KD + ++ + + L
Sbjct: 124 --VMEALRLTRRELDGRVPLIGFSGSPWTLACYMVEGGSSKDFALIKGLMFEQPQVMHHL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+ YL AQI AG + +FD+ G L ++++++ + RI+ + R+
Sbjct: 182 LEVLAQAVTVYLNAQIAAGAQAVMLFDSWGGALSHRDYQDFSLSYMARIVEGLMRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ +A+G+DW+V L+ A + + K+ +QGN+DP L
Sbjct: 242 QVPVILFTKGGGLWLEAMVE-AGCDALGVDWTVDLAKARMRVGKQVALQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ I+ G+G IFNLGHGI P V P+ V LV V
Sbjct: 301 SARVRREVSEIIKAYGAGSGHIFNLGHGIHPTVKPEKVTALVDAV 345
>gi|319790080|ref|YP_004151713.1| uroporphyrinogen decarboxylase [Thermovibrio ammonificans HB-1]
gi|317114582|gb|ADU97072.1| uroporphyrinogen decarboxylase [Thermovibrio ammonificans HB-1]
Length = 348
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 200/345 (57%), Gaps = 10/345 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL +G + PIW+MRQAGRY YR+IR K +F+++C PE E+TL
Sbjct: 1 MSLKDHPILRAARGEKTDYTPIWIMRQAGRYSERYRRIRAKAGSFMELCRNPELAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFL 117
PI DAAILFSDILV + +G V+FVE +GP + P T + L P + L
Sbjct: 61 IPIEEIGVDAAILFSDILVPVEKMGIEVKFVEGKGPVLSPKVETADDARRLKVPEPEKDL 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++I +++++L + LIGF GAP+T+ASYM+ GG K++ + + + +
Sbjct: 121 PYVL---ETIQLIKRRLTDR-PLIGFSGAPFTLASYMLEGGSSKNYINAKSAMWNSPELW 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L+ L D EYL AQI AGVD++QIFD+ G L ++E + +++ A++ ++
Sbjct: 177 DTLMGKLVDTVVEYLSAQIEAGVDLVQIFDSWMGVLSREDYERFVFPYTEKVVKALKERH 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
P+ I F A ++L+ RL + IGLDW + FALE + + +QGNLDP+ L
Sbjct: 237 PSVPIIHFGVNASHLLEVNNRLP-VDVIGLDWKTEIPFALE-RIDKSIQGNLDPVALFAD 294
Query: 298 NQVMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V IL + L + IFNLGHGI P DP LV+TV
Sbjct: 295 EKTITEKVEKILTEGLKARGHIFNLGHGILPPTDPAKARFLVETV 339
>gi|184158888|ref|YP_001847227.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ACICU]
gi|332875749|ref|ZP_08443549.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6014059]
gi|238058010|sp|B2HVF8|DCUP_ACIBC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|183210482|gb|ACC57880.1| Uroporphyrinogen-III decarboxylase [Acinetobacter baumannii ACICU]
gi|322508866|gb|ADX04320.1| hemE [Acinetobacter baumannii 1656-2]
gi|323518860|gb|ADX93241.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii
TCDC-AB0715]
gi|332736073|gb|EGJ67100.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6014059]
Length = 357
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ + ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPVIVFTKGGGQWLEPM-IASGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G ++ NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVH 349
>gi|28872231|ref|NP_794850.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969454|ref|ZP_03397591.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato T1]
gi|301382665|ref|ZP_07231083.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
Max13]
gi|302061842|ref|ZP_07253383.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
K40]
gi|302130958|ref|ZP_07256948.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|38257459|sp|Q87V23|DCUP_PSESM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28855485|gb|AAO58545.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925825|gb|EEB59383.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato T1]
gi|331016019|gb|EGH96075.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 354
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 193/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIAEI-GADTLGLDWTCDIGEARQRVGNKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|330899284|gb|EGH30703.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 354
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|312958548|ref|ZP_07773068.1| Uroporphyrinogen decarboxylase [Pseudomonas fluorescens WH6]
gi|311287091|gb|EFQ65652.1| Uroporphyrinogen decarboxylase [Pseudomonas fluorescens WH6]
Length = 355
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 196/348 (56%), Gaps = 16/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAHAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P+ DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A
Sbjct: 125 -----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 HLLLDKLAQSVTAYLNGQIMAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
K I F KG G L++ ++A+GLDW+ L A + + +QGN+DP L
Sbjct: 240 EGRKVPVILFTKGGGLWLESIAD-AGADALGLDWTCDLGEARRRVGNQVALQGNMDPTVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP+V+P++ ++ V
Sbjct: 299 YAKPEAIRAEVGRILASYGKGTGHVFNLGHGITPEVNPEHAGAFLRAV 346
>gi|330807118|ref|YP_004351580.1| Uroporphyrinogen decarboxylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375226|gb|AEA66576.1| Uroporphyrinogen decarboxylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 355
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 196/349 (56%), Gaps = 16/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTMQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVISTLADIEALPIPDPQKDLGY 124
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A
Sbjct: 125 -----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 HLLLDKLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
K I F K G L++ ++A+GLDW+ + A E + + +QGN+DP L
Sbjct: 240 EGRKVPVILFTKNGGLWLESIAD-AGADALGLDWTCDIGNARERVGHKVALQGNMDPTVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL GSG +FNLGHGITP+VDP++ ++ V
Sbjct: 299 YAKPDAIRAEVGRILASYGSGSGHVFNLGHGITPEVDPEHAGAFLRAVH 347
>gi|298485073|ref|ZP_07003170.1| Uroporphyrinogen III decarboxylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160483|gb|EFI01507.1| Uroporphyrinogen III decarboxylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 354
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 182 LEKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|254238258|ref|ZP_04931581.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa C3719]
gi|126170189|gb|EAZ55700.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa C3719]
Length = 355
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 192/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+++C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMNLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLTYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|330977138|gb|EGH77096.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 354
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNYL 120
RY DAAILFSDIL I DA+G+ + F EGPR T +I L P+ L Y
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + L
Sbjct: 124 --VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
K I F KG G L++ + ++ +GLDW+ + A + + + +QGN+DP L
Sbjct: 242 KVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 301 PEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 345
>gi|291612589|ref|YP_003522746.1| uroporphyrinogen decarboxylase [Sideroxydans lithotrophicus ES-1]
gi|291582701|gb|ADE10359.1| uroporphyrinogen decarboxylase [Sideroxydans lithotrophicus ES-1]
Length = 354
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 191/331 (57%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY RK+ +FL++C +P+ E+TLQP+ R+ DAAILFSDIL +
Sbjct: 23 PLWMMRQAGRYLPEYCATRKRAGSFLNLCKSPDMATEVTLQPLDRFPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGP+ + P+TT+ L P+I L Y + ++S +RK L
Sbjct: 83 PDAMGLGLYFSEGEGPKFERPLTTEAAIKALRVPDIGKDLKY---VTDAVSQIRKALDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT++ YM+ GG D+ + + Y+ + + +L +D EYL AQI
Sbjct: 140 VPLIGFTGSPWTLSCYMVEGGSSDDYAKVKTLMYKEPKLMHHILSVTADAVTEYLNAQIE 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + IFD+ G L + ++ + RI+ ++R++ K I F KG G +++
Sbjct: 200 AGAQAVMIFDSWGGALSHAAYHEFSLPYMQRIVQGLKREHDGVKIPSIVFTKGGGLWIES 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ +A+GLDW++ + A QK G +QGNLDP L +V+ + V IL
Sbjct: 260 IADI-GCDAVGLDWTMDIGVA--RQKVGHKVALQGNLDPTILFATPEVIHNEVEKILSSY 316
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G G +FNLGHGI+ +P N LV+ V
Sbjct: 317 GYGSGHVFNLGHGISQFTNPDNAAALVQAVH 347
>gi|15600227|ref|NP_253721.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAO1]
gi|254244082|ref|ZP_04937404.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 2192]
gi|12229804|sp|P95458|DCUP_PSEAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|9951323|gb|AAG08419.1|AE004916_8 uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAO1]
gi|126197460|gb|EAZ61523.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 2192]
Length = 355
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|160871970|ref|ZP_02062102.1| uroporphyrinogen decarboxylase [Rickettsiella grylli]
gi|159120769|gb|EDP46107.1| uroporphyrinogen decarboxylase [Rickettsiella grylli]
Length = 356
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 196/349 (56%), Gaps = 10/349 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + L ++ PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+TL
Sbjct: 1 MKNSPYRFIRALLKQPVDRTPIWIMRQAGRYLPEYRTVRRKAGDFLTLCKTPELACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLN 118
QP++R+N DAAI+FSDIL I DA+G + FVE EGP R T +I L+ LN
Sbjct: 61 QPLQRFNLDAAIIFSDILTIPDAMGLGLYFVEGEGPQFRKSLQTISDIKALSIPDPTDLN 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + +I + R++L + LIGF G+PWT+A YM+ GG +D + R YQ + +
Sbjct: 121 Y---VMDAIRLTRQELKGKVPLIGFAGSPWTLACYMVEGGSSRDFIKIRSLLYQEVKTLH 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LL+ L+ YL AQI AGV I IFDT G L ++ ++ + +I++ ++ +
Sbjct: 178 YLLNSLTQAIILYLRAQIKAGVQTIMIFDTWGGLLTPATYQEFSLEYMTQIVTNLKNNFE 237
Query: 239 NA-KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLV 295
I F KG L+ + +AIGLDW++ + A + K+ + QGN+DP L+
Sbjct: 238 EKIPIILFTKGGNLWLEKIAT-SGCDAIGLDWTMEIGAARQRVKDKKIALQGNMDPAVLL 296
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL G+G IFNLGHGI+ P+NV ++ V
Sbjct: 297 GNAKTIRREVKHILQSYGNGSGHIFNLGHGISQYTPPENVNIMINAVHE 345
>gi|119356021|ref|YP_910665.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides DSM
266]
gi|166234244|sp|A1BCW4|DCUP_CHLPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119353370|gb|ABL64241.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides DSM
266]
Length = 351
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 197/346 (56%), Gaps = 13/346 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELAAEVTIQPVDLMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G +V +E++G R+ P ++ L+ P+I+ L Y +
Sbjct: 67 DAAIIFSDILVVNEAMGMDVEIIESKGIRLSPAIRSQVDIDRLIIPDINEKLGY---VMD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 AIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V EY++ QI AG D IQIFD+ A L E ++ +A + + A++ KYP+ I F
Sbjct: 184 SVITEYVLMQIEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAIKTKYPDTPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L T +A+GL W++ ++ A EL +QGN+DP L +
Sbjct: 244 SKDCNTILSEIAD-TGCDAMGLGWNMDIAKARKELNDRVCIQGNMDPTVLYGTPDKIRSE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IL G + +FNLGHGI P VDP N+ LV+ V+ E +
Sbjct: 303 AAKILKQFGQHTATSGHVFNLGHGILPDVDPANLKLLVEFVKEESV 348
>gi|255318423|ref|ZP_05359656.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SK82]
gi|262378653|ref|ZP_06071810.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SH164]
gi|255304415|gb|EET83599.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SK82]
gi|262299938|gb|EEY87850.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SH164]
Length = 357
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 185/348 (53%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDSTPVWMMRQAGRYLPEYRETRAKAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP---NIDLFLNYL 120
RRY DAAILFSDIL + DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYELDAAILFSDILTVPDALGLGLYFEAGEGPKFKKTVRTEQDVANLPAFNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVSAIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ EYL AQI AG +QIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDRLAVAVTEYLNAQIDAGAQAVQIFDSWGGALAHREYLEFSLNYMQKIITGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A GLDW+ PL A + + +QGNLDP L
Sbjct: 242 RIPVILFTKGGGQWLEQM-VATGADAFGLDWTTPLHVARQTVNGRAALQGNLDPATLYGS 300
Query: 298 NQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ A+LD +I NLGHGIT VDP + + TV
Sbjct: 301 ATTIEKATKAMLDDAYLNGEKTGYIANLGHGITQWVDPAHPKVFIDTV 348
>gi|237809333|ref|YP_002893773.1| uroporphyrinogen decarboxylase [Tolumonas auensis DSM 9187]
gi|259645159|sp|C4LAY4|DCUP_TOLAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|237501594|gb|ACQ94187.1| uroporphyrinogen decarboxylase [Tolumonas auensis DSM 9187]
Length = 355
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 189/342 (55%), Gaps = 11/342 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L L ++ P+WLMRQAGRYLPEYRQ+R + +F+ +C TPE E+TLQP+RR+
Sbjct: 8 RYLRALLRQPVDRTPVWLMRQAGRYLPEYRQLRAEAGDFMTLCQTPELACEVTLQPLRRF 67
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYLLPI 123
DAAILFSDIL I DA+G + F EGP+ + L P+ + L Y +
Sbjct: 68 ELDAAILFSDILTIPDAMGLGLTFGAGEGPKFAKTIQHQRDVDALPLPDPEGELRY---V 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++K L + LIGF G+PWT+A+YM+ GG K + + Y+ + + LL
Sbjct: 125 MDAVRTIKKALAQQVPLIGFSGSPWTLATYMVEGGSSKQFSRIKQMMYREPKLLHGLLSK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF- 242
L+ +YL AQI AG D + IFDT G L +++ ++ + + I+ + R+Y
Sbjct: 185 LAASVTQYLNAQIAAGADAVMIFDTWGGVLSHQDYQEFSLQYMTAIVQGIHRQYDGRTIP 244
Query: 243 -ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
F KG G L+ + +AIG+DW+ +S A + + +QGN+DP L + V
Sbjct: 245 VTLFTKGGGQWLEAI-AASGCDAIGIDWTTDISAARARVGHKVALQGNMDPAVLQGDDAV 303
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGITP ++P V V V
Sbjct: 304 VTAKVQEILQQYGNGSGHVFNLGHGITPDIEPARVKTFVDAV 345
>gi|49086972|gb|AAT51403.1| PA5034 [synthetic construct]
Length = 356
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|77361801|ref|YP_341376.1| uroporphyrinogen decarboxylase [Pseudoalteromonas haloplanktis
TAC125]
gi|123589060|sp|Q3IJU2|DCUP_PSEHT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|76876712|emb|CAI87934.1| uroporphyrinogen decarboxylase [Pseudoalteromonas haloplanktis
TAC125]
Length = 354
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 200/344 (58%), Gaps = 16/344 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ ++I L+PN D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPNDD 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+
Sbjct: 121 LGY-----VMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D +YL AQI AG + +FD+ G L ++ ++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+Y + F K G ++ T +AIGLDW++ +S A + + +QGN+DP
Sbjct: 236 REYDGRRVPVTLFTKNGGQWIEAI-AATGCDAIGLDWTINISDAKRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
L + + V IL+ G+G +FNLGHGITP VDP+N
Sbjct: 295 SMLHGTPERIRQEVATILEDFGTGNGHVFNLGHGITPDVDPENA 338
>gi|92112251|ref|YP_572179.1| uroporphyrinogen decarboxylase [Chromohalobacter salexigens DSM
3043]
gi|122420968|sp|Q1R1C8|DCUP_CHRSD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91795341|gb|ABE57480.1| uroporphyrinogen decarboxylase [Chromohalobacter salexigens DSM
3043]
Length = 353
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 196/350 (56%), Gaps = 15/350 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + ++L L ++ P+W+MRQAGRYLPEYR+ R + +F+D+C E E+T+
Sbjct: 1 MPLQNDRLLRALARQPVDRTPVWMMRQAGRYLPEYRETRGQAGSFMDLCRNAELACEVTM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFL 117
QP+RRY DAAILFSDIL I DA+ + F EGP+ + + E L P+ + L
Sbjct: 61 QPLRRYALDAAILFSDILTIPDAMDLGLYFETGEGPKFRKTVRSAEAVDALPVPDAERDL 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+Y + ++ +R +L + + LIGF G+PWT+A+YMI GG KD + Y + A
Sbjct: 121 DY---VMNAVRTIRHELADSVPLIGFSGSPWTLATYMIEGGSSKDFRHAKALMYGDPAAM 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ +YL AQI AG ++QIFDT G L + ++ + RI+ + R++
Sbjct: 178 HALLDKLARSVTDYLNAQIRAGAQIVQIFDTWGGVLSTPAYREFSLAYMARIVEGLIREH 237
Query: 238 P--NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPM 292
+ I F K G L+ + DS +A+GLDW+ LS A + +QGNLDP
Sbjct: 238 EGRHVPVILFTKQGGQWLET---IADSGADAVGLDWTTELSDARARVGDRVALQGNLDPN 294
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L Q + D V IL GSGP +FNLGHG++ DP +V ++ +
Sbjct: 295 VLFASPQAIRDEVARILASYGSGPGHVFNLGHGVSQFTDPDHVAAFIEAL 344
>gi|254787472|ref|YP_003074901.1| uroporphyrinogen decarboxylase [Teredinibacter turnerae T7901]
gi|259645158|sp|C5BRJ3|DCUP_TERTT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|237686429|gb|ACR13693.1| uroporphyrinogen decarboxylase [Teredinibacter turnerae T7901]
Length = 354
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 189/344 (54%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L LQG ++ P+W+MRQAGRYLPEYR R + +F+ +C P+ E+TLQP+
Sbjct: 5 KNDRFLRALQGQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMGLCTNPQLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+RY DAAILFSDIL + DA+G + F EGP+ +P+ T P ++ N L
Sbjct: 65 QRYPLDAAILFSDILTVPDAMGLGLYFETGEGPKFRNPVRTAAQVEALPVVNAE-NELTY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R +L + LIGF G+PWT+ +YM+ GG KD +++ Y LLD
Sbjct: 124 VLDAVKTIRHELNGAVPLIGFSGSPWTLMTYMVEGGSSKDFRRSKAMLYSEPEVARLLLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK- 241
L +YL AQI AG +QIFD+ G L + ++ + + +I++ + R++ +
Sbjct: 184 KLVASVTDYLNAQIRAGAQAVQIFDSWGGALAHDAYLEFSLKPMQQIVNGLIREHQGRQV 243
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ T A+GLDW+ + A E + + +QGN+DP L
Sbjct: 244 PVILFTKGGGQWLEAMAE-TGVTALGLDWTTDIGNARERVGGKVALQGNMDPSVLYASTS 302
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGITP+VDP + + V
Sbjct: 303 AIRDEVGRILASYGHGSGHVFNLGHGITPEVDPVHAGAFINAVH 346
>gi|148225452|ref|NP_001085981.1| MGC82980 protein [Xenopus laevis]
gi|49116745|gb|AAH73643.1| MGC82980 protein [Xenopus laevis]
Length = 367
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 194/343 (56%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+RR+
Sbjct: 21 LRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLRRFPL 79
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNYLLPIF 124
DAAI+FSDILVI ALG +R GP +P+ T Q+++ L ++D+ L Y +F
Sbjct: 80 DAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEELGY---VF 136
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL L
Sbjct: 137 RAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQL 196
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----N 239
+D+ EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 197 TDIIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAEGLDQ 256
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
I FAK A Y L++ + + +GLDW++ P K +QGN+DP L
Sbjct: 257 VPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYASK 315
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +++ G +I NLGHG+ P +DP++V + V
Sbjct: 316 GDIEKTVKMMIEGFGRRGYIANLGHGLYPDMDPEHVGAFISAV 358
>gi|325954069|ref|YP_004237729.1| uroporphyrinogen decarboxylase [Weeksella virosa DSM 16922]
gi|323436687|gb|ADX67151.1| Uroporphyrinogen decarboxylase [Weeksella virosa DSM 16922]
Length = 341
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 206/341 (60%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G ++ PP+W+MRQAGRYLPE+ ++R ++ +F C TPE E+TLQPIRR+
Sbjct: 8 LKALRGEEVDRPPVWMMRQAGRYLPEFIKLRDQY-DFFTRCRTPELAAEITLQPIRRFPL 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIY-LLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ A+G + GP ++ PI T Q++ L++P+I+ L Y++
Sbjct: 67 DAAIIFSDILVLPQAMGMDFEMKNGIGPWLENPIKTLQDVENLIDPDIEETLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ I +K+L N I LIGF G+PWT+ Y + G K + + F YQN +A + LL+ ++
Sbjct: 124 ALDITKKELDNKIPLIGFAGSPWTILCYAVEGRGSKAFDKAKSFCYQNPKAAHLLLEKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V+ +YL ++ GV+ +QIFD+ G L +++ ++ + +I +A+ P+A I F
Sbjct: 184 KVTIDYLKKKVEHGVNAVQIFDSWGGMLSPQDYDEFSWPYIEQITNALA---PHAPVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L R + ++A+G+DW+V A EL +QGN DP RL+ +V+
Sbjct: 241 GKGCWFALDKMSR-SKASALGVDWTVTPQTARELTGNRITLQGNFDPSRLMSPPKVIQQM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ++D G+ ++ NLGHGI P + +N ++ V + K
Sbjct: 300 VKEMIDGFGTTKYVANLGHGILPTIPVENAQAFIEAVVNYK 340
>gi|107104134|ref|ZP_01368052.1| hypothetical protein PaerPA_01005207 [Pseudomonas aeruginosa PACS2]
gi|218894133|ref|YP_002443002.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa LESB58]
gi|226723876|sp|B7V3C7|DCUP_PSEA8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218774361|emb|CAW30178.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa LESB58]
Length = 355
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 191/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLTYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|254426915|ref|ZP_05040622.1| uroporphyrinogen decarboxylase [Alcanivorax sp. DG881]
gi|196193084|gb|EDX88043.1| uroporphyrinogen decarboxylase [Alcanivorax sp. DG881]
Length = 353
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 189/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R+ +F+D+C + E+TLQP+
Sbjct: 7 QNDRFLRALNRESVDRTPIWMMRQAGRYLPEYRAAREHAGSFMDLCRNADLACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGP+ + E L P+ + L Y
Sbjct: 67 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKVVRTEADVAALPIPDAETDLGY- 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 126 --VMKAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHLKAMVYSQPEVAHAL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI G V+QIFDT G L ++ ++ + + +I+ + R +
Sbjct: 184 LDKLAQSVTSYLNAQIRHGAQVVQIFDTWGGALSAEAYQQFSLKYMKQIVDGLIRDHEGR 243
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW++ + A + + +QGN+DP L
Sbjct: 244 KVPVILFTKNGGLWLESMAE-SGCDALGLDWTINIGEARRRVGGKVALQGNMDPAVLYAS 302
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
Q + V IL+ G P IFNLGHGITPQVDP++ ++ V
Sbjct: 303 PQAIRAEVKRILNDFGDHPGHIFNLGHGITPQVDPEHARVFIEAV 347
>gi|88861407|ref|ZP_01136036.1| uroporphyrinogen decarboxylase [Pseudoalteromonas tunicata D2]
gi|88816582|gb|EAR26408.1| uroporphyrinogen decarboxylase [Pseudoalteromonas tunicata D2]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 196/351 (55%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR +R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDATPVWMMRQAGRYLPEYRALRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + PI + L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLHFETGEGPRFERPIMDMRDVVNLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFGKIKKMAFAEPEI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ + +I++ + R+
Sbjct: 178 LHMLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGILTPRDYREFSLGYMDKIVAGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
Y K F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 238 YDGRKVPVTLFTKNGGMWLEAM-AATGCDALGLDWTIDIADAKARVGDKVALQGNMDPAM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V ILD G G +FNLGHGITP VDP+N + +V
Sbjct: 297 LHASPERIRQEVQKILDGFGQGSGHVFNLGHGITPDVDPENAGAFINSVHE 347
>gi|90022326|ref|YP_528153.1| uroporphyrinogen decarboxylase [Saccharophagus degradans 2-40]
gi|123090271|sp|Q21H88|DCUP_SACD2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89951926|gb|ABD81941.1| uroporphyrinogen decarboxylase [Saccharophagus degradans 2-40]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 189/344 (54%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALMRQPVDQTPVWMMRQAGRYLPEYRATRAQAGDFMGLCTNPERACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ + + + L L +
Sbjct: 65 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFKKTISTAADIEKLEVIKPLQDLPYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y + A L+D
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFQKTKALIYNHPEAAAQLMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
L+D YL AQI AG +QIFD+ G L ++ ++ + +I+ ++R+ K
Sbjct: 185 LADSVIAYLNAQIDAGAQAVQIFDSWGGALSHDAYKTFSLAPMAKIVKGLKRENEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F KG G L+ + D+ A +GLDW+ + A + + +QGN+DP L
Sbjct: 245 VILFTKGGGQWLEA---MADAGADCLGLDWTTDIGQARARVGDKVALQGNMDPSILYASP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G+G +FNLGHGITP VDP++ ++ V
Sbjct: 302 DRIREEVARILASYGAGTGHVFNLGHGITPGVDPEHAGAFIRAV 345
>gi|70733959|ref|YP_257599.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf-5]
gi|123658487|sp|Q4KJI4|DCUP_PSEF5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|68348258|gb|AAY95864.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf-5]
Length = 355
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 196/348 (56%), Gaps = 16/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRANAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P+ DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A
Sbjct: 125 -----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+S + R++
Sbjct: 180 HLLLDKLAQSVTAYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVSGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
K I F KG G L++ ++++GLDW+ + A + + +QGN+DP L
Sbjct: 240 DGRKVPVILFTKGGGLWLESIAD-AGADSLGLDWTCDIGEARRRVGSKVSLQGNMDPTVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
Q + V IL G G +FNLGHGITP+V P++ ++ V
Sbjct: 299 YANPQAIRSEVARILASYGKGSGHVFNLGHGITPEVKPEHAGAFLEAV 346
>gi|315453972|ref|YP_004074242.1| uroporphyrinogen decarboxylase [Helicobacter felis ATCC 49179]
gi|315133024|emb|CBY83652.1| uroporphyrinogen decarboxylase [Helicobacter felis ATCC 49179]
Length = 340
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 187/328 (57%), Gaps = 10/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY+++R++ KNFLD+C + E+TLQPI + DAAILFSDIL++
Sbjct: 16 PIWMMRQAGRYLREYQEVRQQAKNFLDLCANVKLATEVTLQPIEILDVDAAILFSDILLL 75
Query: 81 ADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G + F+ GP+ T ++I+ L+ LNY +++ IS +R +L
Sbjct: 76 PHAMGLPLEFLPGVGPKFTRTITNLEDIHALHTGAHQQLNY---VYEIISSVRAQLDKSK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAPWT+A+YMI G K + + Y + LL+ LS YL AQ+ A
Sbjct: 133 ALIGFSGAPWTLATYMIEGQGSKTYRHCKKLLYSQPEILHALLEKLSSELIAYLSAQVEA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D + IFD+ AG L + + + +I A++ KYP I F KG G L +
Sbjct: 193 GADALMIFDSWAGALELEAYLTFGWNYIQKITRALKAKYPKIPLIIFPKGVGAYLAHLS- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
D +G DW PL A E+ + V QGNL+P RL + M +GV+ IL+V+G P
Sbjct: 252 -GDFEVLGCDWGTPLKMAQEILGDRYVLQGNLEPARL-YSPEAMAEGVDRILEVMGKAPG 309
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
FIFNLGHG+ + ++LV+ VR +
Sbjct: 310 FIFNLGHGMIEDLPRAQAIELVRLVRQK 337
>gi|224058034|ref|XP_002193866.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 369
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 197/348 (56%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F C +P+ ELTLQP+
Sbjct: 16 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRAS-QDFFATCRSPKLCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL-LNPNIDLFLNYLL 121
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L +D+ + L
Sbjct: 75 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFTEPLKEVEDLLKLRQKVDV-TSELG 133
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+FQ+I++ R L + LIGF GAPWT+ SYMI GG + + + Y++ A + LL
Sbjct: 134 YVFQAITLTRHSLEGKVPLIGFSGAPWTLMSYMIEGGGSTTMAKAKSWLYRHPEASHRLL 193
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK----- 236
L+DV +YL+ Q+ AG +Q+F++HAG LG F+++A + I AV+ K
Sbjct: 194 RLLADVIIDYLVGQVAAGAQALQLFESHAGHLGPELFQDFALPYIQDIAQAVKSKLKEEA 253
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P I FAK A Y L++ +GLDW++ P ++ K+ +QGNLDP L
Sbjct: 254 LPLVPMIIFAKDAHYALRDLAH-AGYEVVGLDWTIRPQEARAQIGKDVTLQGNLDPCALY 312
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 313 APKEKIGELVKKMLESFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHA 360
>gi|229587975|ref|YP_002870094.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens SBW25]
gi|259645154|sp|C3KBH3|DCUP_PSEFS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229359841|emb|CAY46693.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens SBW25]
Length = 355
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 196/348 (56%), Gaps = 16/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRANAGDFMSLCMNPEFACEVTMQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P+ DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A
Sbjct: 125 -----VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 180 HLLLDKLAQSVTSYLNGQIMAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
K I F KG G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 EGRKVPVILFTKGGGLWLESIAD-AGADALGLDWTCDIGEARRRVGGQVALQGNMDPTVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP+V+P++ ++ V
Sbjct: 299 YAKPEAIRTEVGRILASYGKGTGHVFNLGHGITPEVNPEHAGAFLRAV 346
>gi|326925281|ref|XP_003208846.1| PREDICTED: uroporphyrinogen decarboxylase-like [Meleagris
gallopavo]
Length = 395
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 197/350 (56%), Gaps = 15/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F D C +P+ ELTLQP+
Sbjct: 42 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRAA-QDFFDTCRSPKLCCELTLQPL 100
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL-LNPNIDLF--LNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L +D+ L Y
Sbjct: 101 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKEVEDLLKLRQKVDVSAELGY 160
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ++++ R L + LIGF GAPWT+ SYM+ GG + + + Y++ A +
Sbjct: 161 ---VFQAVTLTRHSLEGKVPLIGFSGAPWTLMSYMVEGGGSATMAKAKSWLYRHPEASHR 217
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--- 236
LL L+DV +YL+ Q+ AG +Q+F++HAG LG +F+ +A + I V+ K
Sbjct: 218 LLRLLTDVVTDYLVGQVAAGAQALQLFESHAGHLGPEQFQEFALPYIRDIARDVKSKLKA 277
Query: 237 --YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
P I FAK A Y L++ + +GLDW++ P ++ K +QGNLDP
Sbjct: 278 EALPLVPMIVFAKDAHYALRDLAQ-AGYEVVGLDWTIQPQEARAQVGKGITLQGNLDPCA 336
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 337 LYAPKEKIGELVKKMLESFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHA 386
>gi|194333095|ref|YP_002014955.1| uroporphyrinogen decarboxylase [Prosthecochloris aestuarii DSM 271]
gi|238056493|sp|B4S3W2|DCUP_PROA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194310913|gb|ACF45308.1| uroporphyrinogen decarboxylase [Prosthecochloris aestuarii DSM 271]
Length = 351
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 198/344 (57%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPVPRTPIWVMRQAGRYLPEYRAIREK-TDFLTLCKTPELAAEVTIQPVDIIGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G +V+ +E +G ++ P ++ L+ P+I+ L Y++
Sbjct: 67 DAAIIFSDILVVNEAMGMDVQIIETKGIKLTPPIRSQVDIDRLIIPDIEEKLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 AIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPQMAHMLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V EYL+ Q+ AG D +QIFD+ A L E ++ +A + + A++ KYP+ I F
Sbjct: 184 QVITEYLLMQVEAGADALQIFDSWASALSEDDYREFALPYIKESVQAIKTKYPDIPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L + T +A+GL W++ ++ A ELQ +QGN+DP L + +
Sbjct: 244 SKDCNTILSDIAD-TGCDAMGLGWNMDIAKARKELQDRVCIQGNMDPTVLYGTHDKIKAE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL G +FNLGHGI P VDP N+ LV V+ E
Sbjct: 303 AAKILKQFGQHTAESGHVFNLGHGILPDVDPANLKCLVDFVKEE 346
>gi|294649884|ref|ZP_06727284.1| uroporphyrinogen decarboxylase [Acinetobacter haemolyticus ATCC
19194]
gi|292824258|gb|EFF83061.1| uroporphyrinogen decarboxylase [Acinetobacter haemolyticus ATCC
19194]
Length = 357
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 189/347 (54%), Gaps = 10/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAEAGDFLSLCKNTDFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN-PNIDLFLNYLLP 122
RRY DAAILFSDIL + DALG + F EGP+ E + N P ++ + L
Sbjct: 65 RRYALDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD-LAY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y + LLD
Sbjct: 124 VMNAVSTIRSALNGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHALLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK- 241
L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+ +
Sbjct: 184 HLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDGKRI 243
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ T ++A GLDW+ PL A + + +QGNLDP L
Sbjct: 244 PIIVFTKGGGQWLETMLT-TGADAFGLDWTTPLYTARDVVAGRAALQGNLDPAVLYGSAA 302
Query: 300 VMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G +I NLGHGIT VDP V TV
Sbjct: 303 SIEKSVKAMLDDAYQNGEKTGYIANLGHGITQWVDPAQPKIFVDTVH 349
>gi|226490274|emb|CAX69379.1| uroporphyrinogen decarboxylase [Schistosoma japonicum]
Length = 364
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 204/355 (57%), Gaps = 22/355 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I++ +G ++ P+W+MRQAGRYLPE+R +R+K +F ++C TPE +TLQPI
Sbjct: 9 KNDNIIKAAKGETVSRLPVWIMRQAGRYLPEFRALREK-HDFFEICRTPELACTVTLQPI 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNY 119
R++ DAAI+FSDILVI ALG V+ GP+ +P+ + +++ LN N+D+ LNY
Sbjct: 68 YRFDLDAAIIFSDILVIPQALGMEVKMQPGVGPKFTEPLNSIKDLDRLNANVDVRKELNY 127
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+++SI++ R +L + LIGF GAPWT+ SYM+ GG + + + + Y + ++
Sbjct: 128 ---VYESITLTRHRLEGKVPLIGFSGAPWTLMSYMVEGGSSNTYSRAKRWLYNDPQSSQK 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+++ E+L+ Q +G ++Q+F++HAG L H F + + RI S VRR+ N
Sbjct: 185 LLNLLTEIIVEHLVQQALSGAQLLQVFESHAGFLSPHLFSKFCLPYLKRITSEVRRRLFN 244
Query: 240 AK---------FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNL 289
I FAK Y L + + + I LDW++ A + + +QGNL
Sbjct: 245 EHKVPRDSIPPLIVFAKDGHYALSDLSK-AGYDVISLDWTISPKLARNYVDSDITLQGNL 303
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV---LDLVKTV 341
DP L + V ++ G +I NLGHGI P VDP+NV +DLV +
Sbjct: 304 DPCALYSSENEISILVKEMISDFGLHRYIVNLGHGIYPDVDPENVNKFVDLVHQI 358
>gi|257461230|ref|ZP_05626327.1| uroporphyrinogen decarboxylase [Campylobacter gracilis RM3268]
gi|257441258|gb|EEV16404.1| uroporphyrinogen decarboxylase [Campylobacter gracilis RM3268]
Length = 348
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 189/331 (57%), Gaps = 14/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLP+Y +R++ +FL +C E+T+QP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLPQYMVVRERAGDFLSLCRDYRAASEVTIQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPN-IDLFLNYLLPIFQSISILRKKLPNH 137
+G ++RF EGPR DPI +Q ++ L+P L Y ++ +IS+ R +L
Sbjct: 76 PMQMGMDLRFEAGEGPRFSDPIRSQSDLARLDPQKAAAELGY---VYDTISLTRSRLAAD 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCGAPWT+A+YMI GG K++ + Y+N + + +L +++ + YL QI
Sbjct: 133 KALIGFCGAPWTIATYMIEGGGSKNYAVCKRMLYENPQLLHEILRLVTEATKLYLAHQIG 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY- 256
+GVD +QIFD+ AG L +E + R + I ++ K+P+ I FAKG G +
Sbjct: 193 SGVDAVQIFDSWAGALEPSAYEEFGWRYILEITEFLKAKFPHIPLIVFAKGTGAQMSRLS 252
Query: 257 ----RRLTDS-NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD 310
RR S + G+DWS P+ A E L + +QGNL+PMRL + GV IL
Sbjct: 253 SIAARRGEASFDVWGVDWSTPIELAREQLGGKFALQGNLEPMRL-YDRGAIESGVREILV 311
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ IFNLGHGI P V +N LV V
Sbjct: 312 AMKGAAHIFNLGHGILPDVSVQNAKYLVDLV 342
>gi|21674849|ref|NP_662914.1| uroporphyrinogen decarboxylase [Chlorobium tepidum TLS]
gi|29611777|sp|Q8KAW2|DCUP_CHLTE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21648071|gb|AAM73256.1| uroporphyrinogen decarboxylase [Chlorobium tepidum TLS]
Length = 351
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 194/332 (58%), Gaps = 13/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+ DAAI+FSDILV+
Sbjct: 20 PIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELACEVTIQPVDLMGVDAAIIFSDILVV 78
Query: 81 ADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G NV +E +G ++ P + L++P+ID L Y+L +I + +K+L +
Sbjct: 79 NEAMGMNVEIIETKGIKLTPPIRSQADIDKLIDPDIDEKLGYVL---DAIRLAKKELNDR 135
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GA WT+ +Y + GG K++ + Y+ + + LL +SD + YL+ Q+
Sbjct: 136 VPLIGFSGAAWTLFTYAVEGGGSKNYTWAKKMMYREPKMAHQLLQKISDCISAYLVKQVE 195
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG D IQIFD+ A L E ++ +A + + ++AV+ YP I+FAK +L +
Sbjct: 196 AGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEIPVIAFAKDMNTILSDIA 255
Query: 258 RLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-- 314
++A+GL W++ ++ A EL +QGN+DP L + + +L G
Sbjct: 256 D-CGADAVGLGWNIDIAKARKELNDRVCLQGNMDPTVLYGTPEKIKSEAAKVLKQFGQHN 314
Query: 315 --GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 315 DHSGHVFNLGHGILPDVDPANLKCLVEFVKEE 346
>gi|50085555|ref|YP_047065.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ADP1]
gi|81695805|sp|Q6F9M1|DCUP_ACIAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49531531|emb|CAG69243.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ADP1]
Length = 358
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 192/349 (55%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C E+ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAQAGDFLSLCKNTEFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN-PNIDLF--LNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E +LN PN + L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFKKTIRTEQDVLNLPNFNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVTTIHSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRYTKHMMYSQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ +YL AQI AG +QIFD+ G L E+ ++ + +I++ ++R+
Sbjct: 182 LDRLAVAVIDYLNAQIDAGAQAVQIFDSWGGALAHREYTEFSLNYMRKIVAGLQREKDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++AIGLDW+ PL+ A + + +QGNLDP L
Sbjct: 242 RIPVILFTKGGGQWLEPM-IATGADAIGLDWTTPLNVARKTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G +I NLGHGIT VDP V TV
Sbjct: 301 AASIEKSVKAMLDDAYANGETTGYIANLGHGITQWVDPSQPKIFVDTVH 349
>gi|226952588|ref|ZP_03823052.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ATCC 27244]
gi|226836668|gb|EEH69051.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ATCC 27244]
Length = 357
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 189/347 (54%), Gaps = 10/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAEAGDFLSLCKNTDFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN-PNIDLFLNYLLP 122
RRY DAAILFSDIL + DALG + F EGP+ E + N P ++ + L
Sbjct: 65 RRYALDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD-LAY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y + LLD
Sbjct: 124 VMNAVSTIRSALNGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHALLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK- 241
L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+ +
Sbjct: 184 HLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDGRRI 243
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ T ++A GLDW+ PL A + + +QGNLDP L
Sbjct: 244 PIIVFTKGGGQWLETMLT-TGADAFGLDWTTPLYTARDVVAGRAALQGNLDPAVLYGSAA 302
Query: 300 VMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A+L D +G +I NLGHGIT VDP V TV
Sbjct: 303 SIEKSVKAMLDDAYQNGEKTGYIANLGHGITQWVDPAQPKIFVDTVH 349
>gi|153952657|ref|YP_001397668.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. doylei
269.97]
gi|166234242|sp|A7H2D8|DCUP_CAMJD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|152940103|gb|ABS44844.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. doylei
269.97]
Length = 340
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI N DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILNVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPIFDNPISTLEDLEKLDDQNAHKKLNY---VYNALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFSYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYALQGNMEPCRLYDKNAIK-EGVEKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|289207457|ref|YP_003459523.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. K90mix]
gi|288943088|gb|ADC70787.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. K90mix]
Length = 352
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 196/347 (56%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ PPIW+MRQAGRYLPEYR+ R + +F+++C PE E+T+QP+
Sbjct: 6 KNDRLLRALLREPVDRPPIWIMRQAGRYLPEYRETRAQAGSFMNLCQNPELACEVTMQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + F EGPR DPI + E L P+ + L Y
Sbjct: 66 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRDPIRSLEAIENLPVPDPEQELRY- 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A+YM+ G +D + + Y +A + L
Sbjct: 125 --VMDAVRLIRRELNGEVPLIGFAGSPWTLATYMVEGQGSRDFAETKRLMYGEPQAMHAL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++ EYL AQI AG + +FDT G L + ++ + RI+ + R +
Sbjct: 183 LQKVATAVTEYLNAQIRAGAQAVMVFDTWGGSLTPRGYREFSLAYMQRIVDGLIRDHDGR 242
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG L+ T ++A+GLDW++ ++ A + +QGNLDP L
Sbjct: 243 RVPVTLFTKGGDAWLEAQAE-TGADALGLDWTIEIAEASRRVGDRVALQGNLDPSVLYAP 301
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V+ + +LD +FNLGHGI P +DP+ V LV+TV S
Sbjct: 302 DAVVREEALRVLDGFDRDTGHVFNLGHGIHPGIDPERVATLVETVTS 348
>gi|299769284|ref|YP_003731310.1| uroporphyrinogen decarboxylase [Acinetobacter sp. DR1]
gi|298699372|gb|ADI89937.1| uroporphyrinogen decarboxylase [Acinetobacter sp. DR1]
Length = 357
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 190/349 (54%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSQAGDFLSLCKNTDFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 242 RIPIIVFTKGGGQWLEPMIT-TGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V ++L D +G +I NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKSMLDDAYANGEKTGYIANLGHGITQWVDPAQPKIFVDTVH 349
>gi|86150818|ref|ZP_01069034.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124703|ref|YP_004066707.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841988|gb|EAQ59234.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018425|gb|ADT66518.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 340
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L N N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPVFDNPISTLEDLEKLDNQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVGKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|268316746|ref|YP_003290465.1| uroporphyrinogen decarboxylase [Rhodothermus marinus DSM 4252]
gi|262334280|gb|ACY48077.1| uroporphyrinogen decarboxylase [Rhodothermus marinus DSM 4252]
Length = 353
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 183/325 (56%), Gaps = 9/325 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR +R + F D+ TPE E+TLQP+RR+ DAAI+FSDILV+
Sbjct: 25 PVWIMRQAGRYLPEYRALRAD-EAFFDVVRTPELATEVTLQPLRRFPLDAAIIFSDILVV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
ALG V + GP DP+ T E L P++ L Y+L ++I++ RK L
Sbjct: 84 PQALGLRVEMIPGRGPYFPDPLRTVEDLRRLRRPDVREALRYML---EAITMTRKALAGR 140
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGFCGAPWT+ +YM+ GG K + + + Y+ A + LL L+DV E+LIAQI
Sbjct: 141 VPLIGFCGAPWTLMAYMVEGGGSKTFARAKGWLYRQPEASHRLLSLLTDVLVEFLIAQID 200
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG V+Q+FD+ AG L F +A + RI V + P I FA+GA L
Sbjct: 201 AGAQVVQVFDSWAGVLSPDLFRTFALPYLRRIGEEVGKARPEVPRIVFARGAHASLAELA 260
Query: 258 RLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ +GLDW++ A EL +QGNLDP L + + + +L+ G
Sbjct: 261 E-AGYDVVGLDWTIDPRQARELTGGRVALQGNLDPCALYAEPETIRRLTHRMLEAFGPRG 319
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
I NLGHG+ P +P +V V+ V
Sbjct: 320 HIANLGHGLHPDHNPDHVRAFVEAV 344
>gi|110835088|ref|YP_693947.1| uroporphyrinogen decarboxylase [Alcanivorax borkumensis SK2]
gi|122959310|sp|Q0VMC3|DCUP_ALCBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110648199|emb|CAL17675.1| uroporphyrinogen decarboxylase [Alcanivorax borkumensis SK2]
Length = 353
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R+ +F+D+C + E+TLQP+
Sbjct: 7 QNDRFLRALNRETVDRTPIWMMRQAGRYLPEYRAAREHAGSFMDLCKNADLACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
RY DAAILFSDIL I DA+G + F EGP+ + E L P+ + L Y
Sbjct: 67 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKVVRTEADVAALPIPDAESDLGY- 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + +
Sbjct: 126 --VMNAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHLKAMVYSQPELAHAM 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI G +QIFDT G L ++ ++ R + +I+ + R
Sbjct: 184 LDKLAQSVTGYLNAQIRHGAQAVQIFDTWGGALSAEAYKEFSLRYMQQIVDGLIRDNEGR 243
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 244 KVPVILFTKNGGLWLESM-AATGCDALGLDWTINIGDARRRVGDKVALQGNMDPAVLYAS 302
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
Q + V ILD G P IFNLGHGITPQVDP++ ++ V
Sbjct: 303 PQAIRAEVKRILDDFGDHPGHIFNLGHGITPQVDPEHAKVFIEAV 347
>gi|332534520|ref|ZP_08410356.1| uroporphyrinogen III decarboxylase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036010|gb|EGI72488.1| uroporphyrinogen III decarboxylase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 354
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 199/344 (57%), Gaps = 16/344 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ ++I L+P +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPTDE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+
Sbjct: 121 LGY-----VMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D +YL AQI AG + +FD+ G L ++ ++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+Y K F K G ++ T +AIGLDW++ +S A + + +QGN+DP
Sbjct: 236 REYDGRKVPVTLFTKNGGQWIEAI-AATGCDAIGLDWTINISDAKRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
L + + V IL+ G+G +FNLGHGITP VDP+N
Sbjct: 295 SMLHGTPERIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENA 338
>gi|326559434|gb|EGE09859.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 46P47B1]
gi|326562993|gb|EGE13269.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 12P80B1]
gi|326568569|gb|EGE18641.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC1]
gi|326572469|gb|EGE22461.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC8]
gi|326572484|gb|EGE22473.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis CO72]
gi|326574079|gb|EGE24027.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 101P30B1]
gi|326576043|gb|EGE25962.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis O35E]
Length = 358
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 200/353 (56%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF--LNYL 120
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ L+Y
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSSLDY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + L
Sbjct: 128 --VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHAL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 186 LAKITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 246 PVILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFG 304
Query: 297 GNQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD VL ++ N GHGIT +P + + V +I
Sbjct: 305 SPKMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|315636353|ref|ZP_07891602.1| uroporphyrinogen decarboxylase [Arcobacter butzleri JV22]
gi|315479332|gb|EFU70016.1| uroporphyrinogen decarboxylase [Arcobacter butzleri JV22]
Length = 346
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 190/330 (57%), Gaps = 15/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R K NFL++C+ PE E+T+QP+ DAAILFSDILV+
Sbjct: 18 PVWMMRQAGRYLPEYMEVRAKAGNFLNLCHNPELAAEVTIQPLDIVGVDAAILFSDILVV 77
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL------NYLLPIFQSISILRKK 133
+ +G + F++ EGP D PI T+ ++D + N L ++++I IL+++
Sbjct: 78 PNEMGMKLDFLKGEGPVFDKPIKTE------ADLDALIGGEEAANKLTYVYETIKILKQR 131
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
LP LIGF GAPWT+A+YMI G K + + Y N + +L ++DV Y+
Sbjct: 132 LPQDKALIGFTGAPWTLATYMIEGQGTKTYNLCKKMMYSNPEFLHKILRQVTDVVKFYME 191
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI +GVDV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG +
Sbjct: 192 KQIQSGVDVVQIFDSWAAAIEPSKYDEFSWKYMVEIAEYLKEKYPHIPVIMFPKGIAAFI 251
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + + G+DW P++ A E L ++ +QGN++P RL + V I +++
Sbjct: 252 ERGLVYGNFDVFGVDWGTPMALAKEKLGEKYVLQGNMEPCRL-YSKEATTMCVEGIQNIM 310
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N + VK +
Sbjct: 311 SGNGHIFNLGHGILPDVPVENAIHFVKECQ 340
>gi|149194365|ref|ZP_01871462.1| uroporphyrinogen decarboxylase [Caminibacter mediatlanticus TB-2]
gi|149135540|gb|EDM24019.1| uroporphyrinogen decarboxylase [Caminibacter mediatlanticus TB-2]
Length = 346
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 187/327 (57%), Gaps = 12/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++RKK NFLDM PE E+TLQPI + DAAILFSDIL +
Sbjct: 18 PVWMMRQAGRYLPEYMEVRKKVGNFLDMTRNPEIVAEVTLQPIEILDVDAAILFSDILNL 77
Query: 81 ADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G ++RF + GP D + ++I L+PN D L Y +++ I ++++LP +
Sbjct: 78 PMEMGLSLRFEKGVGPVFDKTIDSEKDIDNLDPNADEKLFY---VYEGIKKIKERLPENK 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YM+ G K + + + Y N + LL F + + EYL QI A
Sbjct: 135 ALIGFAGSPWTIATYMVEGRGSKQYAKIKKMVYSNPMLLHRLLAFNTKETIEYLSKQIEA 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D + IFD+ L + +F ++ + I +++ YP I F+KG G +
Sbjct: 195 GADAVMIFDSWGSALEKEKFFEFSWNYMKEIAKNIKQNYPTIPVIGFSKGVGLYYPDMD- 253
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + IG+DWSVP+ ++L + K+ +QGN+DP RL + V I ++
Sbjct: 254 -GEFDVIGVDWSVPMDYSLGIFKDNYTLQGNMDPTRL-YSKSATKEAVEKIAKIMKGHRH 311
Query: 318 IFNLGHGITPQVDPKNV---LDLVKTV 341
IFNLGHGI P V +N +DL K V
Sbjct: 312 IFNLGHGILPDVPVENAKYFVDLCKEV 338
>gi|326559711|gb|EGE10121.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 7169]
gi|326564977|gb|EGE15177.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 103P14B1]
Length = 358
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 200/353 (56%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF--LNYL 120
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ L+Y
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSSLDY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + L
Sbjct: 128 --VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHAL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 186 LAKITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 246 PVILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFG 304
Query: 297 GNQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD VL ++ N GHGIT +P + + V +I
Sbjct: 305 SPKMIQIEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|224437755|ref|ZP_03658702.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
gi|313144201|ref|ZP_07806394.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
gi|313129232|gb|EFR46849.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
Length = 339
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 189/327 (57%), Gaps = 11/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYL EYR R K FLD+C E+TLQP+ + DAAILFSDILV+
Sbjct: 16 PIWLMRQAGRYLSEYRATRAKAGGFLDLCKNVNLATEVTLQPVEILDVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F+ EGP + ITT +++ L D L Y ++ ++S +R KLP
Sbjct: 76 PLEMGLPLEFLSGEGPHFNRTITTLEDVKALGCAKDK-LGY---VYDAVSSIRSKLPKDK 131
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y+ + LL+ LSD YL QI A
Sbjct: 132 ALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKQPQVLKALLERLSDELKAYLEGQIQA 191
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + +QIFD+ AG L + + ++ + I ++ KYP+ + F KG G L
Sbjct: 192 GANAVQIFDSWAGALEQEAYLEFSWGYMKDIAKYIKGKYPHIPVMLFPKGIGAYLDKID- 250
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GP 316
+ + G+DW P++ A E L K+ +QGNL+P RL + M GV IL+++G G
Sbjct: 251 -GEFDVFGVDWGTPMNMAKEKLGKKYVLQGNLEPSRLYDVDS-MRRGVKEILEIMGKDGG 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P + +N ++LVK VR
Sbjct: 309 HIFNLGHGMLPDLPRENAIELVKMVRE 335
>gi|53802347|ref|YP_112864.1| uroporphyrinogen decarboxylase [Methylococcus capsulatus str. Bath]
gi|81683000|sp|Q60BY1|DCUP_METCA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|53756108|gb|AAU90399.1| uroporphyrinogen decarboxylase [Methylococcus capsulatus str. Bath]
Length = 350
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 198/329 (60%), Gaps = 14/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR++R++ +F+++C +PE E+TLQP+ RY DAAILFSDIL +
Sbjct: 18 PVWMMRQAGRYLPEYREVRERAGSFMNLCTSPELACEVTLQPLERYRLDAAILFSDILTV 77
Query: 81 ADALGRNVRFVENEGPRM-DPIT-TQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + FVE EGPR +PI +I+ L P+ + L Y + ++ +++++L +
Sbjct: 78 PDAMGLGLEFVEGEGPRFRNPIRGAADIHRLGVPDPEAELAY---VPAAVRLIKQRLGDR 134
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGF G+PWT+A+YM+ GG ++ + + Y+ + LL+ L+D A YL AQI
Sbjct: 135 APLIGFSGSPWTLATYMVEGGSSREFRKVKCLMYEEPALMHELLEKLADAVALYLNAQIA 194
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-RKYPNAKFISFAKGAGYMLKNY 256
AGVD + +FDT G L + ++ R R+ +R I F KG G L+
Sbjct: 195 AGVDAVMVFDTWGGNLDTEHYLAFSLRYAERVRQQLRLTGRGRIPAIFFTKGGGQWLEA- 253
Query: 257 RRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ D+ +A+GLDW+ + A + + +QGNLDP+ L +++ V IL+ G
Sbjct: 254 --MADAGYDALGLDWTTDIGSARQRVGDRVALQGNLDPVALYARPEIIRGEVRKILERYG 311
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G +FNLGHG+TP + P++V +++ V
Sbjct: 312 RGSGHVFNLGHGVTPDIKPEHVGAMIEAV 340
>gi|329891174|ref|ZP_08269517.1| uroporphyrinogen decarboxylase [Brevundimonas diminuta ATCC 11568]
gi|328846475|gb|EGF96039.1| uroporphyrinogen decarboxylase [Brevundimonas diminuta ATCC 11568]
Length = 325
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 179/327 (54%), Gaps = 6/327 (1%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W MRQAGRYLPEYR +R K +F+ C PE E TLQP+RR+ FDAAI+F+DIL+I
Sbjct: 1 MWFMRQAGRYLPEYRALRAKAPDFIAFCLNPEMAAEATLQPMRRFGFDAAIVFADILLIP 60
Query: 82 DALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
ALG+ V F EGPR+ + + + + L + Q++S++R +L LI
Sbjct: 61 GALGQKVWFEAGEGPRLGALPS--VQSMADKAQQAGEALKAVGQTLSLVRAELEPERALI 118
Query: 142 GFCGAPWTVASYMISGGFIK----DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
GF GAPWTVA+YM+ G + R +AY N LLD L + +A YL Q
Sbjct: 119 GFAGAPWTVATYMLDGEARTIGKGERAAARTYAYTNPELVAGLLDVLVESTAHYLKMQQD 178
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG V++IF++ A L + FE + ++++ R + F +G+ + + Y
Sbjct: 179 AGAQVLKIFESWAEGLPDDLFETLVLKPHQKLVARARELGVTVPLMGFPRGSAALAERYA 238
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
R D + LD + PL +Q P+QG LDP+ L G + V+ +++ G GP+
Sbjct: 239 RECDVQGVALDTACPLDVGRRVQAIKPIQGALDPLLLRAGGDALDRRVDQLMEAWGQGPW 298
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P V +V ++K + ++
Sbjct: 299 IFNLGHGILPDVPIAHVEQVLKRIGAQ 325
>gi|296113437|ref|YP_003627375.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis RH4]
gi|295921131|gb|ADG61482.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis RH4]
Length = 358
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 200/353 (56%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF--LNYL 120
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ L+Y
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIVALPKIDMTSSLDY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + L
Sbjct: 128 --VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHAL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 186 LAKITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 246 PVILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFG 304
Query: 297 GNQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD VL ++ N GHGIT +P + + V +I
Sbjct: 305 SPKMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|115633818|ref|XP_784308.2| PREDICTED: similar to MGC83088 protein [Strongylocentrotus
purpuratus]
gi|115951010|ref|XP_001192736.1| PREDICTED: similar to MGC83088 protein [Strongylocentrotus
purpuratus]
Length = 368
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 194/346 (56%), Gaps = 17/346 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G P+WLMRQAGRYLPE+R++R + NF +C TP E+TLQPIRR++
Sbjct: 17 ILRAARGEKTERVPVWLMRQAGRYLPEFREMRAE-HNFFKVCQTPALACEVTLQPIRRFD 75
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDL--FLNYLLPI 123
DAAI+F DILVI ALG V + GP +P+T+ ++ LN +D+ L+Y +
Sbjct: 76 LDAAIIFCDILVIPQALGLTVEMIPGTGPSFPEPLTSPDDLSRLNAEVDINQALSY---V 132
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++++ RK+L + LIGF GAPWT+ Y I GG K + + + Y A + LL
Sbjct: 133 FEALTLTRKELDGKVPLIGFSGAPWTLMVYCIEGGGSKTFSKAKKWLYTQPDASHKLLKI 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
L+ +YL+ Q+ AG ++Q+FD+HAG LG +F + + +I V+ K AK
Sbjct: 193 LTRTIVDYLVGQVLAGAQLLQVFDSHAGALGYDKFCQFCLPYLQQIAKEVKEKL-RAKSV 251
Query: 242 ----FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKGA Y + + D + + LDW V A + P+QGNLDP +
Sbjct: 252 EPVPMIVFAKGANYAISELSQ-CDYDVMSLDWDVQPQIARAQAGPNFPLQGNLDPCAIYS 310
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +L+ G+ +I NLGHGI P DP++V + +V
Sbjct: 311 SKEDISSYVAQMLERFGTQSYIANLGHGIYPDFDPEHVRAFIDSVH 356
>gi|308048100|ref|YP_003911666.1| uroporphyrinogen decarboxylase [Ferrimonas balearica DSM 9799]
gi|307630290|gb|ADN74592.1| uroporphyrinogen decarboxylase [Ferrimonas balearica DSM 9799]
Length = 354
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 191/351 (54%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRAEAGDFMSLCKNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + + + N P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQTLADNKATIENLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + A+
Sbjct: 121 LGY---VMDAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKDFAKIKKMAFAEPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG +QIFDT G L + ++ R + +I+ + R
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQAVQIFDTWGGALSGPAYREFSLRYMHKIVDGLIRD 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
Y K + F KG G L++ T +A+GLDW+V + A + + +QGN+DP
Sbjct: 238 YDGHKVPVVLFTKGGGQWLEDI-AATGCDAVGLDWTVDVKAARARVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V IL G G +FNLGHGI DP++ + V
Sbjct: 297 LYAPVPRIEEEVERILGEFGHGDGHVFNLGHGIHQHADPEHAGAFINAVHE 347
>gi|313110071|ref|ZP_07795974.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 39016]
gi|310882476|gb|EFQ41070.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 39016]
Length = 355
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWACDIGSARTRVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|146280958|ref|YP_001171111.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri A1501]
gi|145569163|gb|ABP78269.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri A1501]
Length = 367
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 191/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 18 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPELACEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYL 120
RY DAAILFSDIL + DA+G + F EGPR + + L P+ + L Y
Sbjct: 78 DRYPLDAAILFSDILTVPDAMGLGLYFETGEGPRFKKVVSSAADIEALPIPDPEKDLGY- 136
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y+N +A + L
Sbjct: 137 --VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYENPQAMHAL 194
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 195 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGR 254
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L++ + A+GLDW+ + A + + +QGN+DP L
Sbjct: 255 RVPVILFTKGGGLWLESMAD-AGAEALGLDWTCDIGEARRRVGDKVALQGNMDPSVLYAK 313
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGITP+VDP + +++V
Sbjct: 314 PDAIRAEVARILASFGHGNGHVFNLGHGITPEVDPAHAGAFIESV 358
>gi|327479229|gb|AEA82539.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri DSM 4166]
Length = 354
Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 191/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYL 120
RY DAAILFSDIL + DA+G + F EGPR + + L P+ + L Y
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLYFETGEGPRFKKVVSSAADIEALPIPDPEKDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y+N +A + L
Sbjct: 124 --VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYENPQAMHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L++ + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RVPVILFTKGGGLWLESMAD-AGAEALGLDWTCDIGEARRRVGDKVALQGNMDPSVLYAK 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGITP+VDP + +++V
Sbjct: 301 PDAIRAEVARILASFGHGNGHVFNLGHGITPEVDPAHAGAFIESV 345
>gi|157415506|ref|YP_001482762.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047167|sp|A8FMU8|DCUP_CAMJ8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157386470|gb|ABV52785.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81116]
gi|307748148|gb|ADN91418.1| Uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
M1]
gi|315932389|gb|EFV11332.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
327]
Length = 340
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPVFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVEKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|254524780|ref|ZP_05136835.1| uroporphyrinogen decarboxylase [Stenotrophomonas sp. SKA14]
gi|219722371|gb|EED40896.1| uroporphyrinogen decarboxylase [Stenotrophomonas sp. SKA14]
Length = 360
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 197/356 (55%), Gaps = 20/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M TPE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKTPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + FVE EGP+ E + P+++ L Y
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIAKLAVPDMEQDLGY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + L
Sbjct: 128 --VMDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFSRIKAMALNHPQALHRL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++ YL AQ AG +Q+FDT G L + ++ R + RI + R +
Sbjct: 186 LEVTTEAVIAYLGAQRAAGAQALQVFDTWGGVLSPAMYREFSLRYLQRIAQGLERGEGSE 245
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ I F KG G L+ + T ++A+GLDW++ L A L++ G +QGNLDP L
Sbjct: 246 RTPLILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEA--LRRTGGRVALQGNLDPTTLY 302
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 303 ASPDAIAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|220936178|ref|YP_002515077.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
gi|254767709|sp|B8GPU3|DCUP_THISH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|219997488|gb|ACL74090.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
Length = 351
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 195/349 (55%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K ++L L ++ P+W+MRQAGRYLPEYR R + +F+D+C +PE E+T
Sbjct: 1 MNELKNDRLLRALLREPVDTTPVWIMRQAGRYLPEYRATRARAGSFMDLCQSPEMACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLN-PNIDLF 116
LQP+ R+ DAAILFSDIL I DA+G + F E EGPR + P+ I L P+ +
Sbjct: 61 LQPLERFPLDAAILFSDILTIPDAMGLGLYFSEGEGPRFERPVQDAAAIRALGVPDPETE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ ++R++L + LIGF G+PWT+A+YM+ GG K+ + + Y +
Sbjct: 121 LRY---VTDAVRLIRRELDGRVPLIGFSGSPWTLATYMVEGGSSKEFARIKGMLYDDPST 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LL L++ YL AQI AG + +FDT G L + ++ + RI++ + R+
Sbjct: 178 LHHLLGVLAEAVTVYLNAQIAAGAQAVMVFDTWGGSLTPEGYREFSLAYMQRIVAGLTRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ + F KG G L+ T +A+GLDW+V + A + +QGNLDP
Sbjct: 238 HEGRRVPVTLFTKGGGAWLEVMAE-TGCDALGLDWTVNIGEARRRVGDRVALQGNLDPAV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + +++ G G +FNLGHGI P +DP+ V LV V
Sbjct: 297 LYASAERVRAAARKVVEDFGPGSGHVFNLGHGIHPGIDPEKVAALVDEV 345
>gi|262278336|ref|ZP_06056121.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus
RUH2202]
gi|262258687|gb|EEY77420.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus
RUH2202]
Length = 357
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 188/348 (54%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C ++ E+TLQP+
Sbjct: 5 KNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTDFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DALG + F EGP+ E + N N L+Y
Sbjct: 65 RRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + L
Sbjct: 124 --VMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 182 LDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ T ++A+GLDW+ L A + +QGNLDP L
Sbjct: 242 RIPIIVFTKGGGQWLEPMIS-TGADALGLDWTTRLDTARTTVAGRVALQGNLDPAVLYGS 300
Query: 298 NQVMIDGVNAIL-DVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V A+L D +G +I NLGHGIT VDP V TV
Sbjct: 301 AASIEKAVKAMLDDAYANGEKTGYIANLGHGITQWVDPAQPKIFVDTV 348
>gi|193213554|ref|YP_001999507.1| uroporphyrinogen decarboxylase [Chlorobaculum parvum NCIB 8327]
gi|238058014|sp|B3QL69|DCUP_CHLP8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193087031|gb|ACF12307.1| uroporphyrinogen decarboxylase [Chlorobaculum parvum NCIB 8327]
Length = 351
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 195/332 (58%), Gaps = 13/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+ DAAI+FSDILV+
Sbjct: 20 PIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELACEVTIQPVDLMGVDAAIIFSDILVV 78
Query: 81 ADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G +V+ +E++G ++ P + L++P+++ L Y +F +I + +K+L +
Sbjct: 79 NEAMGMDVQIIESKGIKLTPEIRSQADIDKLIDPDVEEKLGY---VFDAIRLTKKELNDR 135
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GA WT+ +Y + GG K++ + Y+ + + LL ++ + YLI Q+
Sbjct: 136 VPLIGFSGAAWTLFTYAVEGGGSKNYANAKKMMYREPQMAHQLLQKITTCISNYLIKQVE 195
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG D IQIFD+ A L E ++ +A + + ++AV+ YP I FAK +L +
Sbjct: 196 AGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEVPVIVFAKDMNTILSDVA 255
Query: 258 RLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG--- 313
T ++A+GL W++ ++ A EL +QGN+DP L + + IL G
Sbjct: 256 D-TGADAVGLGWNIDIAKARKELNDRVCLQGNMDPTVLYGTPEKIKSEAAKILKQFGQHT 314
Query: 314 -SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 315 DCSGHVFNLGHGILPDVDPANLKCLVEFVKEE 346
>gi|118094545|ref|XP_422430.2| PREDICTED: similar to LOC496978 protein [Gallus gallus]
Length = 416
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 196/350 (56%), Gaps = 15/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F D C +P+ ELTLQP+
Sbjct: 63 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRAA-QDFFDTCRSPKLCCELTLQPL 121
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL-LNPNIDLF--LNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L +D+ L Y
Sbjct: 122 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKEVEDLLKLRQKVDVTAELGY 181
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R L + LIGF GAPWT+ SYM+ GG + + + Y++ A +
Sbjct: 182 ---VFQAITLTRHSLEGKVPLIGFSGAPWTLMSYMVEGGGSTTMAKAKSWLYRHPEASHR 238
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+DV +YL+ Q+ AG +Q+F++HAG LG +F+ +A + I V+ K
Sbjct: 239 LLRLLTDVVTDYLVGQVAAGAQALQLFESHAGHLGPEQFQEFALPYIRDIARDVKSKLKA 298
Query: 240 AKF-----ISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
I FAK A Y L++ + +GLDW++ P ++ K +QGNLDP
Sbjct: 299 EALSLVPMIVFAKDAHYALRDLAQ-AGYEVVGLDWTIQPQEARAQVGKGVTLQGNLDPCA 357
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 358 LYAPKEKIGELVKKMLENFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHA 407
>gi|296391881|ref|ZP_06881356.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAb1]
Length = 355
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPERDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGRARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|152987059|ref|YP_001351090.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PA7]
gi|166234272|sp|A6VDF5|DCUP_PSEA7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150962217|gb|ABR84242.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PA7]
Length = 355
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEKDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N RA +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPRAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRQIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|256823451|ref|YP_003147414.1| uroporphyrinogen decarboxylase [Kangiella koreensis DSM 16069]
gi|256796990|gb|ACV27646.1| uroporphyrinogen decarboxylase [Kangiella koreensis DSM 16069]
Length = 355
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 194/346 (56%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ ++ PIW+MRQAGRYLPEYRQ+R + +F+D+C PE E+TLQP+
Sbjct: 6 KNDRYLKACLQQPVDRTPIWMMRQAGRYLPEYRQLRAEAGSFMDLCTNPELACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP P+ T+ L P+ + L Y
Sbjct: 66 RRYPLDAAILFSDILTIPDAMGLGLYFTPGEGPAFHKPVRTKADVTALPIPDPNQELKY- 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ +R++L + LIGF G+PWT+A+YM+ GG K+ + + Y + + L
Sbjct: 125 --VTDAVATIRRELKGDVPLIGFSGSPWTLATYMVEGGTTKNFSEVKGMMYSDPAVMHQL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ +G + IFDT G L +++ ++ R + +I+ ++R +
Sbjct: 183 LDKLADSIILYLNAQVESGAQALMIFDTWGGVLSPRDYQEFSLRYMQKIVDGLKRDHEGH 242
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L + +T + +G+DW+ L+ A ++ + +QGN+DP L
Sbjct: 243 KIPVTLFTKGGGAWL-DIMAVTGCDCLGVDWTTDLADARAKVAGKVALQGNMDPSILYAE 301
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + D V IL G G +FNLGHGI VDP + +V
Sbjct: 302 DDRIRDEVATILASYGKGSGHVFNLGHGIHQTVDPAKAGVFINSVH 347
>gi|86153082|ref|ZP_01071287.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613555|ref|YP_001000918.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005828|ref|ZP_02271586.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|166234243|sp|A1W0M7|DCUP_CAMJJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|85843967|gb|EAQ61177.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249898|gb|EAQ72857.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|315929344|gb|EFV08551.1| Uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
305]
Length = 340
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPIFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVEKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|57238116|ref|YP_179366.1| uroporphyrinogen decarboxylase [Campylobacter jejuni RM1221]
gi|148926240|ref|ZP_01809925.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|81675559|sp|Q5HTL9|DCUP_CAMJR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|57166920|gb|AAW35699.1| uroporphyrinogen decarboxylase [Campylobacter jejuni RM1221]
gi|145845411|gb|EDK22504.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315058676|gb|ADT73005.1| Uroporphyrinogen III decarboxylase [Campylobacter jejuni subsp.
jejuni S3]
Length = 340
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPVFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVGKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|116053182|ref|YP_793503.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256803|sp|Q02EY3|DCUP_PSEAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115588403|gb|ABJ14418.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 355
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 190/339 (56%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLVYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G G +FNLGHGITP+VDP +
Sbjct: 301 NPAAIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHA 339
>gi|224418385|ref|ZP_03656391.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|253827703|ref|ZP_04870588.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|313141916|ref|ZP_07804109.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|253511109|gb|EES89768.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|313130947|gb|EFR48564.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
Length = 338
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 186/322 (57%), Gaps = 11/322 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYL EYR+ RK+ +FL +C P+ E+TLQPI DAAILFSDILV+
Sbjct: 16 PVWFMRQAGRYLSEYRETRKQAGDFLSLCKNPKLASEVTLQPIDILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F EGP+ + +++ L + L LNY ++ +I++ R+KL
Sbjct: 76 PMEMGMELGFFTGEGPKFTQTIQSDKDLKQLRQDSHLSLNY---VYDTITMTRQKLAKDK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+A+YMI G K + Q + Y N++ + LL+ ++ YL +QI A
Sbjct: 133 ALIGFCGAPWTLATYMIEGQGSKTYNQTKKILYSNAQFLHNLLELITHNLKNYLESQIKA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYR 257
GV+ + IFD+ A L E + + +I S +++KYP I F KG +GY+ K
Sbjct: 193 GVNAVMIFDSWAAALEESAYLEFGFEYCKQIASFIKQKYPEIPVILFPKGISGYLDKIDG 252
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ G+DWS PL A E L + +QGNL+P R + + M++G ILD++
Sbjct: 253 EF---DVFGVDWSTPLKIAKEKLGDKYVLQGNLEPCR-IYDEKSMLEGAKDILDLMQGKR 308
Query: 317 FIFNLGHGITPQVDPKNVLDLV 338
IFNLGHG+ P + +N + LV
Sbjct: 309 HIFNLGHGMLPDLPRENAIKLV 330
>gi|120553768|ref|YP_958119.1| uroporphyrinogen decarboxylase [Marinobacter aquaeolei VT8]
gi|166234254|sp|A1TYW3|DCUP_MARAV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120323617|gb|ABM17932.1| uroporphyrinogen decarboxylase [Marinobacter aquaeolei VT8]
Length = 354
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+TLQP+
Sbjct: 5 KNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYL 120
RY DAAILFSDIL I DALG + F EGP+ + E L N + L+Y
Sbjct: 65 ERYPLDAAILFSDILTIPDALGLGLYFETGEGPKFRKVIRSEADVDALPRMNAESDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R++L + LIGF G+PWT+A+YMI GG K + + Y + L
Sbjct: 124 --VMNAVSTIRRELNGRVPLIGFSGSPWTLATYMIEGGSSKTFSEAKKLMYGQPEVMHRL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL QI AG +QIFDT G L +E ++ R + +I+ + R+
Sbjct: 182 LDHLADSVIDYLNGQIKAGAQAVQIFDTWGGVLSSWAYEEFSLRYMTKIVDGLIRESEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RVPVIVFTKNGGQWLESIAD-CGADAVGLDWTTDIGNARARVGDKVALQGNMDPAMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL GSG +FNLGHGITP VDP++ ++ V
Sbjct: 301 KARIRQEVADILKRYGSGSGHVFNLGHGITPDVDPEHAGAFIEAV 345
>gi|237752607|ref|ZP_04583087.1| uroporphyrinogen decarboxylase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376096|gb|EEO26187.1| uroporphyrinogen decarboxylase [Helicobacter winghamensis ATCC
BAA-430]
Length = 340
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 194/328 (59%), Gaps = 9/328 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYL EY+++RK+ +FL +C P+ E+TLQP+ N DAAILFSDILVI
Sbjct: 17 PVWFMRQAGRYLSEYKEVRKQAGDFLSLCKNPKLASEVTLQPVEILNVDAAILFSDILVI 76
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G ++ F EGP+ +PI +TQ++ L+ N L+Y ++++IS+ R+KL
Sbjct: 77 PLEMGMDLGFFAGEGPKFANPISSTQDLIKLSDNAYEKLSY---VYETISLTRQKLAKDK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+A+YMI G K + +++ YQN + + +L ++ YL QI A
Sbjct: 134 ALIGFCGAPWTLATYMIEGEGSKTYVKSKKMLYQNPKFLHEILQKITYNLKYYLEYQIKA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + +FD+ A L + + + + I ++ KYP+ I F KG L R
Sbjct: 194 GVNAVMVFDSWASALEQDAYLEFGWKYCKEIADFIKDKYPHIPVILFPKGISGFLD--RI 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DWS PLS A E L + +QGNL+P R+ + M+ G ILD++
Sbjct: 252 DGNFDVFGVDWSTPLSSAKEKLGSKYVLQGNLEPCRIYAKDS-MLKGAKEILDLMQGSAH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IFNLGHG+ P + +N + LV+ + + K
Sbjct: 311 IFNLGHGMLPDLPRENAIALVEFIHNYK 338
>gi|194366811|ref|YP_002029421.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia
R551-3]
gi|194349615|gb|ACF52738.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia
R551-3]
Length = 360
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 196/356 (55%), Gaps = 20/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M PE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKNPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + FVE EGP+ E + P+++ L Y
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIAKLAVPDMEQDLGY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + L
Sbjct: 128 --VMDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFARIKAMALNHPQALHRL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++ YL AQ AG +Q+FDT G L + ++ R + RI + R N
Sbjct: 186 LEVTTEAVIAYLGAQRAAGAQALQVFDTWGGVLSPSMYREFSLRYLQRIAEGLERGEGNE 245
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ I F KG G L+ + T ++A+GLDW++ L A +++ G +QGNLDP L
Sbjct: 246 RTPLILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEA--MRRTGGRVALQGNLDPTTLY 302
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 303 ASPDAIAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|119900268|ref|YP_935481.1| uroporphyrinogen decarboxylase [Azoarcus sp. BH72]
gi|166234231|sp|A1KCN9|DCUP_AZOSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119672681|emb|CAL96595.1| uroporphyrinogen decarboxylase [Azoarcus sp. BH72]
Length = 358
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 185/325 (56%), Gaps = 5/325 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY + RK+ +FL++C +P E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 22 PVWLMRQAGRYLPEYCETRKRAGSFLNLCKSPALACEVTLQPLARYDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F E EGPR + E + N ++ L + ++S +R+ L + L
Sbjct: 82 PDAMGLGLYFAEGEGPRFERPLRDEWEIRNLSVPDPHAELQYVMDAVSEIRRALDGSVPL 141
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+PWT+A YM+ GG D+ + + AY + +L +D +YL AQI AG
Sbjct: 142 IGFSGSPWTLACYMVEGGSSDDYRRIKTMAYSRPDLLHHILGVTADAVVQYLNAQIEAGA 201
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ +FD+ G L E + ++ R + R++ + R+ + I F KG G L++
Sbjct: 202 QAVMVFDSWGGVLAEAAYREFSLRYLQRVVDGLIREREGQRVPSIVFTKGGGIWLESIAA 261
Query: 259 LTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
+ S+A+GLDW++ + A L + +QGNLDP L + + +LD G P
Sbjct: 262 I-GSDAVGLDWTMDIGRARALVGQRVALQGNLDPSILFAPPEAVAAEARRVLDAYGPHPG 320
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHGI+ P+NV LV TV
Sbjct: 321 HVFNLGHGISQFTPPENVSVLVDTV 345
>gi|205356262|ref|ZP_03223028.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345867|gb|EDZ32504.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 340
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/328 (40%), Positives = 193/328 (58%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY + RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEARKQAGDFLSLCKDYKKASEVSLQPIDTLDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPVFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVGKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|157165236|ref|YP_001467205.1| uroporphyrinogen decarboxylase [Campylobacter concisus 13826]
gi|166234238|sp|A7ZEJ7|DCUP_CAMC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112799940|gb|EAT97284.1| uroporphyrinogen decarboxylase [Campylobacter concisus 13826]
Length = 340
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 185/324 (57%), Gaps = 6/324 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +R K +FL +C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMAVRAKAGDFLSLCKDYKKASEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
+G ++RF + EGP E L +I+ + L ++ +I + R+ L L
Sbjct: 76 PLEMGMDLRFEKGEGPVFTKPLRDEAALDALSIERSVKSLAYVYDTIKLTRENLAKDKAL 135
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCGAPWT+A+YMI GG K++ + Y+N + +L+ ++ Y+ QI AGV
Sbjct: 136 IGFCGAPWTIATYMIEGGGSKNYAVCKKMLYENPEFLHQILEKVTQALILYIKEQIKAGV 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRRL 259
+ +QIFD+ A L E + + + +I+ +V+ ++P+ I F KG +GY+ K +
Sbjct: 196 NAVQIFDSWAAALEEQAYFEFGFSYINKIVDSVKAEFPDIPVIVFPKGISGYLDKISGKF 255
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+ G+DWS P+ A E L +QGN++P RL + + +GV+ IL + P I
Sbjct: 256 ---DVFGVDWSTPIELAKEKLSPRYVLQGNMEPTRL-YSKKAIDEGVDKILSTMRGAPHI 311
Query: 319 FNLGHGITPQVDPKNVLDLVKTVR 342
FNLGHGI P V +N +K V+
Sbjct: 312 FNLGHGILPDVPVENAKYFIKEVQ 335
>gi|190575483|ref|YP_001973328.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia K279a]
gi|190013405|emb|CAQ47039.1| putative uroporphyrinogen decarboxylase [Stenotrophomonas
maltophilia K279a]
Length = 360
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 198/356 (55%), Gaps = 20/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M PE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKNPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + FVE EGP+ P+ + L P+++ L Y
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIARLAVPDMEQDLGY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + L
Sbjct: 128 --VMDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFARIKAMALNHPQALHRL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ +D YL AQ AG +Q+FDT G L + ++ R + RI + R +
Sbjct: 186 LEVTTDAVIAYLGAQRAAGAQALQVFDTWGGVLSPAMYREFSLRYLQRIAEGLERGEGSE 245
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ I F KG G L+ + T ++A+GLDW++ L A +++ G +QGNLDP L
Sbjct: 246 RTPLILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEA--MRRTGGRVALQGNLDPTTLY 302
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 303 ASPDAIAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|307720583|ref|YP_003891723.1| uroporphyrinogen decarboxylase [Sulfurimonas autotrophica DSM
16294]
gi|306978676|gb|ADN08711.1| uroporphyrinogen decarboxylase [Sulfurimonas autotrophica DSM
16294]
Length = 345
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 188/330 (56%), Gaps = 17/330 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +R K NFL++C+ PE E+TLQP+ DAAILFSDILVI
Sbjct: 20 PVWMMRQAGRYLPEYMAVRAKAGNFLNLCHNPEMACEVTLQPVDIVGVDAAILFSDILVI 79
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL------NYLLPIFQSISILRKK 133
D +G N+ FV+ EGP+ DPI +E +ID + + L ++ +I +++ K
Sbjct: 80 PDEMGMNLSFVKGEGPKFSDPIKNEE------DIDRLIGGEEAASKLTYVYDTIKLIKTK 133
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L + LIGF G+PWT+A+YMI G K + + Y N + +L +++V Y+
Sbjct: 134 LADDKALIGFTGSPWTLATYMIEGQGTKTYNVCKKMMYANPELLHKILAKVTEVVKLYMQ 193
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI +G+DV+QIFD+ A + ++++ ++ + + I ++ KYP+ I F KG L
Sbjct: 194 KQIESGIDVVQIFDSWAAAIEPNKYDEFSWKYMVEIAEYLKEKYPHIPIIMFPKGIPAFL 253
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
N + + G+DWS P+ A E L + +QGN++P RL + + V I +V+
Sbjct: 254 DNV--YGNFDVFGVDWSTPMELAKEKLGDKYVLQGNMEPCRL-YSKEATTEAVEDIQNVM 310
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N ++
Sbjct: 311 QGKRHIFNLGHGILPDVPVENAKHFIQECH 340
>gi|283954803|ref|ZP_06372319.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
414]
gi|283793643|gb|EFC32396.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
414]
Length = 340
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 191/330 (57%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILVI
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVI 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP D PI+T E L + N LNY ++ ++ + R+KL
Sbjct: 76 PLEMGMNLRFEKGEGPVFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQE 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKILYQNPELLHKILSKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + +QIFD+ A L +F ++ + I + + KYPN I F KG +GY+ K
Sbjct: 193 AGANAVQIFDSWASALEYDKFFEFSFNYMLEISNFTKNKYPNIPVILFPKGISGYLDK-- 250
Query: 257 RRLTDSN--AIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
D N G+DWS PL A + L + +QGN++P RL N + +GV +L +
Sbjct: 251 ---IDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVEKVLKTMQ 306
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IFNLGHGI P + +N +K V+
Sbjct: 307 NKAHIFNLGHGILPDIPIENAKYFIKLVQE 336
>gi|78188113|ref|YP_378451.1| uroporphyrinogen decarboxylase [Chlorobium chlorochromatii CaD3]
gi|123580558|sp|Q3AUB7|DCUP_CHLCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78170312|gb|ABB27408.1| Uroporphyrinogen decarboxylase HemE [Chlorobium chlorochromatii
CaD3]
Length = 351
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 191/344 (55%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELATEVTIQPVELVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G+ V +E +G ++ P + L+ P+ID L Y+L
Sbjct: 67 DAAIIFSDILVVNEAMGQEVNIIETKGIKLAPPIRSQADIDKLIVPDIDEKLGYVL---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 ALRMTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAYAKQMMYREPQMAHSLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
Y + QI AG D IQIFD+ A L E ++ YA + + A++ K+P I F
Sbjct: 184 QTITAYTLKQIEAGADAIQIFDSWASALSEDDYREYALPYIKDTVQAIKAKHPETPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L + T +A+GL W + +S A EL +QGNLDP L + +
Sbjct: 244 SKDCNTILSDIAD-TGCDAVGLGWGIDISKARTELNDRVALQGNLDPTVLYGTQERIKIE 302
Query: 305 VNAILDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL G +FNLGHGI P +DP N+ LV+ V+ E
Sbjct: 303 AGKILKSFGQHNHHSGHVFNLGHGILPDMDPDNLRCLVEFVKEE 346
>gi|303256396|ref|ZP_07342410.1| uroporphyrinogen decarboxylase [Burkholderiales bacterium 1_1_47]
gi|331001476|ref|ZP_08325094.1| uroporphyrinogen decarboxylase [Parasutterella excrementihominis
YIT 11859]
gi|302859887|gb|EFL82964.1| uroporphyrinogen decarboxylase [Burkholderiales bacterium 1_1_47]
gi|329568205|gb|EGG50022.1| uroporphyrinogen decarboxylase [Parasutterella excrementihominis
YIT 11859]
Length = 356
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 189/334 (56%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYRQ R + +F+ + P Y E+TLQP+ RY DAAILFSDIL I
Sbjct: 21 PIWLMRQAGRYLPEYRQTRSEAGSFMGLATNPHYACEVTLQPVDRYPLDAAILFSDILTI 80
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DA+G + FV EGP+ D + +Y+ +P+ + L + ++ +++ L
Sbjct: 81 PDAMGLGLSFVAGEGPKFAKPVQDEAAVKALYVPDPS-----DKLKYVTDAVCEIKRALN 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
N I LIGF G+P+T+A YM+ GG ++ + + Y+ FN +L+ +D YL AQ
Sbjct: 136 NRIPLIGFSGSPFTLACYMVEGGSSSNYRKVKEMMYRRPDLFNEILEKNTDAVIAYLNAQ 195
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYML 253
I +GVD + +FDT G L + ++ + RI+++V+R+ K I F KG +
Sbjct: 196 IESGVDAVMVFDTWGGTLSHEAYLKFSLPCLKRIVNSVKRERHGQKIPSIVFTKGCAPWV 255
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
K + ++A+GLDW+V L L Q + +QGNLDP L G V+ +++
Sbjct: 256 KEISEIG-ADAMGLDWTVSLGEVRALTQDKVALQGNLDPSVLFAGEDVVRQEARKVIEDF 314
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G+G +FNLGHGI DP+ V LV V S
Sbjct: 315 GHVGNGGHVFNLGHGIDKDTDPEVVAALVDEVHS 348
>gi|319778982|ref|YP_004129895.1| Uroporphyrinogen III decarboxylase [Taylorella equigenitalis MCE9]
gi|317109006|gb|ADU91752.1| Uroporphyrinogen III decarboxylase [Taylorella equigenitalis MCE9]
Length = 356
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 195/339 (57%), Gaps = 23/339 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYR R+K +FL + +PE+ E+TLQPI R+N DAAILFSDIL++
Sbjct: 18 PIWLMRQAGRYLPEYRATREKAGSFLGLAKSPEFACEVTLQPIDRFNLDAAILFSDILMV 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + FV EGP+ +PI +E L P+ +N L +F ++ ++R +L +
Sbjct: 78 PDAMGLGLDFVAGEGPKFANPIRDEEDVKNLKVPD----MNELRYVFDAVKLIRGQLQDR 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YMI G K++ Q + Y + +L+ + +A+YLI Q+
Sbjct: 134 VPLIGFAGSPWTIACYMIEGCGSKEYRQIKSMMYSRPELLHSVLEICAQSTAQYLIEQVK 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-------RKYPNAKFISFAKGAG 250
AG I IFD+ G L ++ ++ + + ++ +R K I+F KG G
Sbjct: 194 AGAQAIMIFDSWGGVLAHGYYKEFSLKYMKSVLDTLRGFLNSNEHKGVTVPVIAFTKGGG 253
Query: 251 YMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
L++ + D+ +A+GLDW+V LS A +Q +QGNLDPM L + +
Sbjct: 254 LWLED---MVDAGFDALGLDWTVGLSDARRRVQDRVALQGNLDPMALFSDEKSVRAQARN 310
Query: 308 ILDVLG---SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D G SG +FNLGHGI+ +P V LV V +
Sbjct: 311 VIDDFGPVASGGHVFNLGHGISQFTNPDIVEALVDEVHN 349
>gi|126666710|ref|ZP_01737687.1| uroporphyrinogen decarboxylase [Marinobacter sp. ELB17]
gi|126628755|gb|EAZ99375.1| uroporphyrinogen decarboxylase [Marinobacter sp. ELB17]
Length = 355
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 186/348 (53%), Gaps = 17/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L G ++ P+W+MRQAGRYLPEYR R K +FL +C E+TLQP+
Sbjct: 5 KNDRFLRALMGQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYL 120
R+ DAAILFSDIL I DALG + F EGP+ L N ++ L+Y
Sbjct: 65 ERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFKHTIRSAADVDALPKINAEVDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG KD + + Y + L
Sbjct: 124 --VMNAVSTIRSALNGRVPLIGFSGSPWTLATYMVEGGSSKDFREAKKLMYGQPEVMHKL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----R 235
LD L+D +YL QI AG V+QIFDT G L +E ++ + + +II+ + R
Sbjct: 182 LDHLADAVTDYLNGQIRAGAQVVQIFDTWGGVLSTWAYEEFSLKYMRKIIAGLNLESEGR 241
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
K P I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 KVP---VIVFTKNGGQWLESIAD-CGADAVGLDWTTDIGSARARVGDKVALQGNMDPTML 297
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G IFNLGHGITP VDP + ++ V
Sbjct: 298 YAPPARIREEVGDILRRFGHGTGHIFNLGHGITPDVDPAHAGAFIEAV 345
>gi|114561669|ref|YP_749182.1| uroporphyrinogen decarboxylase [Shewanella frigidimarina NCIMB 400]
gi|122300875|sp|Q088H1|DCUP_SHEFN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114332962|gb|ABI70344.1| uroporphyrinogen decarboxylase [Shewanella frigidimarina NCIMB 400]
Length = 354
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 194/347 (55%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKEVRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMRAVSTIRRELNGSVPLIGFSGSPWTLATYMVEGGSSKTFEKIKRMAYAEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ GV + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVVLYLNAQVANGVQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRFADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSMLYAT 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 301 PERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPEHAGAFINSVHE 347
>gi|194337695|ref|YP_002019489.1| uroporphyrinogen decarboxylase [Pelodictyon phaeoclathratiforme
BU-1]
gi|238056492|sp|B4SGD6|DCUP_PELPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194310172|gb|ACF44872.1| uroporphyrinogen decarboxylase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 351
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 193/344 (56%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAVREK-TDFLTLCKTPELATEVTIQPVELMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G NV +E++G ++ P + L+ P+ID L Y+L
Sbjct: 67 DAAIIFSDILVVNEAMGMNVEIIESKGIKLTPPIRSQADIDKLIVPDIDEKLGYVL---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +++L N + LIGF GA WT+ +Y + GG K++ + Y+ + LL +S
Sbjct: 124 ALRMTKRELDNRVPLIGFTGAAWTLFTYAVEGGGSKNYAYAKKMMYREPAMAHALLGKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V Y++ QI AG D IQIFD+ A L E ++ YA + + A++ KYP+ I F
Sbjct: 184 GVITAYVLKQIEAGADAIQIFDSWASALSEDDYREYALPYIKDTVQAIKAKYPDTPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L + T A+GL W + + A EL +QGNLDP L +
Sbjct: 244 SKDCNTILSDIAD-TGCEAMGLGWGIDIGKARAELGDRVALQGNLDPTVLYGTPDRIKAE 302
Query: 305 VNAILDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL G +FNLGHGI P +DP+N+ LV+ V+ E
Sbjct: 303 ASKILKSFGQHTEHSGHVFNLGHGILPDMDPENLKLLVEFVKEE 346
>gi|154174765|ref|YP_001408740.1| uroporphyrinogen decarboxylase [Campylobacter curvus 525.92]
gi|166234239|sp|A7GZU8|DCUP_CAMC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112802635|gb|EAT99979.1| uroporphyrinogen decarboxylase [Campylobacter curvus 525.92]
Length = 342
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 189/327 (57%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +R++ +FL +C + +T+QP+ DAAILFSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMAVRERAGDFLSLCKDYKKASAVTIQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G +RF + EGP D P+ T ++ +L+ +D + L ++ +I++ R+ L
Sbjct: 76 PLEMGMGLRFEKGEGPVFDRPVKTAGDLAVLD--VDRAVKNLSYVYDTIALTRENLARDK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+A+YMI GG K + + Y N + +L ++ +Y+ AQI A
Sbjct: 134 ALIGFCGAPWTIATYMIEGGGTKTYAVCKKLLYTNPEFLHQILAKVTAALTDYVKAQIRA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD +QIFD+ AG L E + + R + +I+ +V+ ++P+ I F KG L
Sbjct: 194 GVDAVQIFDSWAGALEESAYFEFGWRYILQIVDSVKTEFPDIPLIVFPKGVSGFLDKIS- 252
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ G+DWS P+ A E L + +QGN++P RL + + GV+ IL+ + P
Sbjct: 253 -GNFEVFGVDWSTPIGLAKEKLSPKFVLQGNMEPTRL-YSKKAIDAGVDKILNTMKGAPH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P + +N +K V+ +
Sbjct: 311 IFNLGHGILPDIPVENAKYFIKQVQEK 337
>gi|91791832|ref|YP_561483.1| uroporphyrinogen decarboxylase [Shewanella denitrificans OS217]
gi|123061298|sp|Q12S16|DCUP_SHEDO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91713834|gb|ABE53760.1| uroporphyrinogen decarboxylase [Shewanella denitrificans OS217]
Length = 354
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 193/346 (55%), Gaps = 13/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDATPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F E EGPR + P T + L P+ + L Y
Sbjct: 65 RRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R + +
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTR-FADG 240
Query: 241 KFIS---FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ + F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI VDP++ + +V
Sbjct: 300 SPERIHQEVGQILSSYGKGTGHVFNLGHGIHQHVDPEHAGAFINSV 345
>gi|326568151|gb|EGE18235.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC7]
Length = 358
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 199/353 (56%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF--LNYL 120
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ L+Y
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSSLDY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +RK L + L GF G+ WT+A+YM+ GG ++ + Y + L
Sbjct: 128 --VMKAVTSIRKALNGQVPLFGFSGSSWTLATYMVEGGSSREFRHTKHMMYATPELLHAL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 186 LAKITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 246 PVILFTKGGGLWL-DIQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFG 304
Query: 297 GNQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD VL ++ N GHGIT +P + + V +I
Sbjct: 305 SPKMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|300774728|ref|ZP_07084591.1| uroporphyrinogen decarboxylase [Chryseobacterium gleum ATCC 35910]
gi|300506543|gb|EFK37678.1| uroporphyrinogen decarboxylase [Chryseobacterium gleum ATCC 35910]
Length = 343
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 193/337 (57%), Gaps = 12/337 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLPE+ +R ++ +F C TPE E+TLQPIRR+
Sbjct: 8 LKALRGETVERPPVWMMRQAGRYLPEFIALRDQY-DFFTRCQTPELAAEITLQPIRRFPL 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G + + E+ GP +D PI T E + P+++ L Y +F
Sbjct: 67 DAAILFSDILVVPQAMGIDFKMKESVGPWLDTPIRTMEQVQNIETPDVNDTLGY---VFD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL ++
Sbjct: 124 AIELTLQKLDNDIPLIGFAGSPWTILCYCVEGKGSKAFDIAKSFCFQQPEAAHLLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ GV +Q+FD+ G L +++ ++ + + +II A+ P + F
Sbjct: 184 DTTIAYLKRKVEKGVSAVQVFDSWGGMLSPTDYQEFSWQYIDQIIEALS---PLTHVVVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L++ ++ ++A+G+DW++ FA L +QGN DP RL + +
Sbjct: 241 GKGCWFALEDM-TMSKASALGVDWTIKPEFARTLTNHTMTLQGNFDPARLHSTPETIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
VN +++ G +I NLGHGI P V +N ++ V
Sbjct: 300 VNEMINRFGKDRYIANLGHGILPNVPVENAEAFIRAV 336
>gi|86150605|ref|ZP_01068828.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596105|ref|ZP_01099342.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562855|ref|YP_002344634.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|24211637|sp|Q9PN54|DCUP_CAMJE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|85838956|gb|EAQ56222.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190946|gb|EAQ94918.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360561|emb|CAL35358.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284926467|gb|ADC28819.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927133|gb|EFV06484.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 340
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 194/328 (59%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP +PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLRFEKGEGPVFGNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + IQIFD+ A L +F ++ + I + ++ KYPN I F KG +GY+
Sbjct: 193 AGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVEKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|34556803|ref|NP_906618.1| uroporphyrinogen decarboxylase [Wolinella succinogenes DSM 1740]
gi|45476820|sp|Q7MAA5|DCUP_WOLSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|34482518|emb|CAE09518.1| UROPORPHYRINOGEN DECARBOXYLASE [Wolinella succinogenes]
Length = 340
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 191/329 (58%), Gaps = 12/329 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY Q R++ +FLD+C PE E+TLQP+ + DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLTEYMQTRERAGSFLDLCKNPELACEVTLQPVEILDVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F + EGPR T +++ LL + L Y ++++I +R+ L
Sbjct: 76 PMEMGLELGFYQGEGPRFSQTIRTQKDLLLLQEGAENRLGY---VYEAIHRIRESLHQEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + ++ Y + + + +L +S+ YL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKTYAHSKKMLYSDPKLLHAILAQVSEALKGYLAKQIEA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYR 257
GV+ + +FD+ A L E + ++ + I S V+ +YP+ + F KG AG++ K
Sbjct: 193 GVNAVMVFDSWAAALEESVYFEFSWEYMKEIASFVKARYPHIPVMLFPKGIAGFLDKIE- 251
Query: 258 RLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG-SG 315
D + G+DWS P+ A +L +QGNL+P RL M +GV+ IL ++G
Sbjct: 252 --GDFDVFGVDWSTPMDLAKAKLGDRYVLQGNLEPARL-YDRAKMEEGVDHILSIMGKES 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P + +N ++LVK VR +
Sbjct: 309 GHVFNLGHGMMPDLPRENAIELVKMVRQK 337
>gi|192360733|ref|YP_001983598.1| uroporphyrinogen decarboxylase [Cellvibrio japonicus Ueda107]
gi|238058012|sp|B3PDU1|DCUP_CELJU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|190686898|gb|ACE84576.1| uroporphyrinogen decarboxylase [Cellvibrio japonicus Ueda107]
Length = 356
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 188/344 (54%), Gaps = 15/344 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+TLQP+ RY
Sbjct: 8 RFLRALLRQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMGLCTNPELACEVTLQPLERY 67
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-----IYLLNPNIDLFLNYLL 121
DAAILFSDIL I DA+G + F EGP+ E + ++NP DL
Sbjct: 68 PLDAAILFSDILTIPDAMGLGLYFETGEGPKFHKAVRTEADVNALKVINPEQDLPY---- 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ +R++L + LIGF G+PWT+A+YMI GG +D + + Y + LL
Sbjct: 124 -VVNAVKTIRRELNGRVPLIGFSGSPWTLATYMIEGGSSRDFRRAKEMLYNQPEVMHRLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L++ YL AQI AG +QIFDT G L + + ++ + + +I++ + ++ +
Sbjct: 183 DVLAESVIVYLNAQIRAGAQAVQIFDTWGGALSHNAYREFSLKYMEKIVAGLIGEHEGRQ 242
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F KG G L T + A+GLDW+ ++ A + +QGN+DP L
Sbjct: 243 VPVILFTKGGGQWLDAMAD-TGATALGLDWTTDIAAARARVGNRVALQGNMDPGILYASP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G IFNLGHGITP+VDP++ ++ V
Sbjct: 302 ERIRAEVGNILAAYGQGSGHIFNLGHGITPEVDPEHAGAFIRAV 345
>gi|152993199|ref|YP_001358920.1| uroporphyrinogen decarboxylase [Sulfurovum sp. NBC37-1]
gi|172048742|sp|A6QAQ4|DCUP_SULNB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151425060|dbj|BAF72563.1| uroporphyrinogen decarboxylase [Sulfurovum sp. NBC37-1]
Length = 346
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 187/326 (57%), Gaps = 15/326 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R + NFL++C+ PE E+TLQP+ DAAILFSDILVI
Sbjct: 18 PVWMMRQAGRYLPEYMKVRAEAGNFLNLCHDPEKACEVTLQPVDIVGVDAAILFSDILVI 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL------NYLLPIFQSISILRKK 133
D +G ++ FV+ EGP+ DPI TQ ++D + L ++ +I +++++
Sbjct: 78 PDEMGMDLSFVKGEGPKFSDPIKTQ------ADVDRLIGGEEAAGKLTYVYDTIKLIKER 131
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L LIGF GAPWT+A+YMI G K + + Y + + +L +++V Y+
Sbjct: 132 LAEDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSDPELLHNILAKVTEVVKYYME 191
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI AG+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG +
Sbjct: 192 KQIEAGIDVVQIFDSWASAIEPGKYDEFSWKYMVEIADYLKSKYPDTPIIMFPKGIPAFI 251
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + + G+DW P++ A E L + +QGN++P RL + + V AI V+
Sbjct: 252 ERGLVYGNFDVFGVDWGTPMALAKEKLGDQYVLQGNMEPCRL-YSKEATTECVEAIQKVM 310
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLV 338
G IFNLGHGI P V +N V
Sbjct: 311 GGKRHIFNLGHGILPDVPVENAKHFV 336
>gi|119471338|ref|ZP_01613810.1| uroporphyrinogen decarboxylase [Alteromonadales bacterium TW-7]
gi|119445614|gb|EAW26898.1| uroporphyrinogen decarboxylase [Alteromonadales bacterium TW-7]
Length = 354
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 197/344 (57%), Gaps = 16/344 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ ++I L+P +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPTDE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+
Sbjct: 121 LGY-----VMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D +YL AQ+ AG + +FD+ G L ++ ++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVIDYLNAQVKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+Y K F K G ++ T +A+GLDW++ + A + + +QGN+DP
Sbjct: 236 REYDGRKVPVTLFTKNGGQWIEAI-AATGCDAVGLDWTINIGDAKRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
L + V IL+ G+G +FNLGHGITP VDP+N
Sbjct: 295 SMLHGTPDRIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENA 338
>gi|255534183|ref|YP_003094554.1| Uroporphyrinogen III decarboxylase [Flavobacteriaceae bacterium
3519-10]
gi|255340379|gb|ACU06492.1| Uroporphyrinogen III decarboxylase [Flavobacteriaceae bacterium
3519-10]
Length = 342
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 194/339 (57%), Gaps = 16/339 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGR+LPE+R +R ++ +F C TPE E+T+ PIRRY
Sbjct: 8 LKALRGETVERPPVWMMRQAGRFLPEFRALRDQY-DFFTRCQTPELAAEITMMPIRRYPL 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV+ A+G N EN GP ++ PI T QE+ + PN++ L Y +
Sbjct: 67 DAAILFSDILVVPQAMGINFEMKENLGPWLETPIRTLAQVQEVEV--PNVNDTLGY---V 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I + KL N+I LIGF G+PWT+ Y + G K + F ++N A + LL
Sbjct: 122 FDAIELTLHKLDNNIPLIGFAGSPWTILCYCVEGKGSKTFDVAKKFCFENPEAAHLLLQK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL ++ GV +Q+FD+ G L ++++ ++ + +I+ A+ +
Sbjct: 182 ITDTTIAYLKRKVEKGVSAVQVFDSWGGMLSPYDYQEFSWPYINQIVEALSEL---THVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F KG + L+ L+ S+A+G+DW++ A +L E +QGN DP RL + +
Sbjct: 239 VFGKGCWFALEEM-TLSKSSALGVDWTIRPEIARKLVGENMTLQGNFDPSRLYSSPETIT 297
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ +++ G +I NLGHGI P + +N ++ V
Sbjct: 298 RMVHEMINRFGKDKYIVNLGHGILPNIPLENAEAFIRAV 336
>gi|226941735|ref|YP_002796809.1| DcuP [Laribacter hongkongensis HLHK9]
gi|226716662|gb|ACO75800.1| DcuP [Laribacter hongkongensis HLHK9]
Length = 355
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 178/329 (54%), Gaps = 11/329 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR R + NFL +C +PE E+TLQP+ R+ DAAILFSDIL +
Sbjct: 23 PVWMMRQAGRYLPEYRATRARAGNFLALCKSPELACEVTLQPLERFPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGP+ + E L P++ L Y + ++S +RK L
Sbjct: 83 PDAMGLGLYFAEGEGPKFERPLRDEADIRRLCKPDVGTELKY---VTDAVSTIRKALDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D + AY + +L +D +YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGGSSSDFRTIKTMAYSRPDLLHHILSVTADTVIDYLNAQIA 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG +QIFDT G L + ++ + RII+ + R+ + I F KG G L+
Sbjct: 200 AGAQAVQIFDTWGGALSHAAYREFSLAYMQRIIAGLNREAEGRRVPVIVFTKGGGQWLEA 259
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
T ++A+GLDW+ + A + +QGN DP+ L + V IL GS
Sbjct: 260 MAD-TGADALGLDWTTDIGDARRRVGDRVALQGNFDPVALHAPAAAIETEVARILAAYGS 318
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G +FNLGHGI V P++ V+ V+
Sbjct: 319 GSGHVFNLGHGIGQTVPPEHAAAFVEAVQ 347
>gi|315128052|ref|YP_004070055.1| uroporphyrinogen decarboxylase [Pseudoalteromonas sp. SM9913]
gi|315016566|gb|ADT69904.1| uroporphyrinogen decarboxylase [Pseudoalteromonas sp. SM9913]
Length = 354
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 197/344 (57%), Gaps = 16/344 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ ++I L+P +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPTDE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+
Sbjct: 121 LGY-----VMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D +YL AQ+ AG + +FD+ G L ++ ++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVIDYLNAQVKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+Y K F K G ++ T +A+GLDW++ + A + + +QGN+DP
Sbjct: 236 REYDGRKVPVTLFTKNGGQWIEAI-AATGCDAVGLDWTINIGDAKRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
L + V IL+ G+G +FNLGHGITP VDP+N
Sbjct: 295 SMLHGTPDRIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENA 338
>gi|254447592|ref|ZP_05061058.1| uroporphyrinogen decarboxylase [gamma proteobacterium HTCC5015]
gi|198262935|gb|EDY87214.1| uroporphyrinogen decarboxylase [gamma proteobacterium HTCC5015]
Length = 354
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 193/349 (55%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R K +F+D+C E E+T
Sbjct: 1 MSELKNDRFLRALAHQPVDRTPLWIMRQAGRYLPEYRATRAKAGSFMDLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLF 116
+QP+ RY+ DAAILFSDIL + DA+G + FV EGP+ + E L P+ +
Sbjct: 61 MQPLARYDLDAAILFSDILTVPDAMGLGLYFVTGEGPKFERTVRSEADLKQLATPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG +D + Y N
Sbjct: 121 LGY---VMNAVRTIRQELDGRVPLIGFAGSPWTIATYMVEGGSSRDFANIKGMMYGNPEL 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD ++ + YL AQI AG + +FDT G L ++ ++ + + +I++A+ ++
Sbjct: 178 LHRLLDKITQSTIAYLKAQIAAGAQAVMVFDTWGGALSPENYQIFSLQYMKKIVAALPKE 237
Query: 237 YPNAKFIS--FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
S F K G L++ S +GLDW+ L+ A + + +QGNLDP
Sbjct: 238 ADGRAVPSILFTKNGGQWLESMAE-AGSTGLGLDWTTNLADAKRRVGDKVALQGNLDPSA 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V +L+ G+G +FNLGHGI +DP++V LV+ V
Sbjct: 297 LYAPPAAIRTEVQKVLESFGTGSGHVFNLGHGIHQHIDPEHVSALVEAV 345
>gi|329894548|ref|ZP_08270356.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC3088]
gi|328922986|gb|EGG30312.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC3088]
Length = 358
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 189/344 (54%), Gaps = 5/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + + L L ++ PIW+MRQAGRYLPEYR R + +FLD+C E E+T+Q
Sbjct: 3 NLKNDRFLRALMRQPVDRTPIWMMRQAGRYLPEYRATRAQAGSFLDLCKNTELACEVTMQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+RRY DAAILFSDIL I DALG + F E EGPR E + N + L
Sbjct: 63 PLRRYPMDAAILFSDILTIPDALGLGLYFEEGEGPRFHKTVRCEADIDALNDFKAADDLS 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S +R +L + LIGF G+PWT+A+YM+ GG KD + + AY + LL
Sbjct: 123 YVMDAVSAIRNELNGEVPLIGFSGSPWTLATYMVEGGSSKDFARVKAMAYDQPEVMHKLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP--N 239
L+D A+YL AQI AG +QIFDT G L ++ ++ + + RII+ + ++ +
Sbjct: 183 ALLADAVADYLNAQIAAGAQAVQIFDTWGGSLSASAYKVFSLKYMQRIIAQLTKEADGRS 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F K G L + +N +GLDW+ + A ++ +QGN+DP L
Sbjct: 243 VPVIVFTKNGGQWLSSIAD-CGANCVGLDWTTDIGSARQQIGSRVALQGNMDPAILYASP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL+ G G IFNLGHG+TP V+P +V V V
Sbjct: 302 ARIREEVATILESFGHGSGHIFNLGHGVTPGVNPDHVKAFVDAV 345
>gi|294142680|ref|YP_003558658.1| uroporphyrinogen decarboxylase [Shewanella violacea DSS12]
gi|293329149|dbj|BAJ03880.1| uroporphyrinogen decarboxylase [Shewanella violacea DSS12]
Length = 354
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 192/347 (55%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ IR + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLQQPVDRTPVWMMRQAGRYLPEYKAIRAQAGDFMSLCRDKDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGPR P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ A + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL G G IFNLGHGI VDP++ +K+V
Sbjct: 301 PERIHQEVGQILASYGEGAGHIFNLGHGIHQHVDPEHAGAFIKSVHE 347
>gi|124009641|ref|ZP_01694314.1| uroporphyrinogen decarboxylase [Microscilla marina ATCC 23134]
gi|123984782|gb|EAY24762.1| uroporphyrinogen decarboxylase [Microscilla marina ATCC 23134]
Length = 346
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 191/343 (55%), Gaps = 19/343 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL L+G V P+WLMRQAGR LPEYR IR K F+++ TPE E+T+QP+
Sbjct: 9 ILRTLRGEVTERKPVWLMRQAGRILPEYRAIRSKLSGFIELVTTPELAAEVTIQPVDILG 68
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ------EIYLLNPNIDLFLNYLL 121
DAAI+FSDILVI +A+G +E +GP P T Q +I + +P D L Y+L
Sbjct: 69 VDAAIIFSDILVIPEAMGLPYEMIEKKGPFF-PKTIQSEADAKKIKVADPESD--LGYVL 125
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I I +K L + LIGF GAPWT+ +YM+ G K + + Y+ + +L
Sbjct: 126 ---EAIRITKKNLDGRVPLIGFAGAPWTIFAYMVEGSGSKTFSKAKAMLYRTPELAHSIL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
++D + YL AQI AGV+++Q+FD+ AG L ++ +A + +I A+
Sbjct: 183 QKITDSTILYLKAQIKAGVNLVQLFDSWAGLLSPETYQAFAMPYLKQIADAIT----EVP 238
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQV 300
I FAKGA + + Y + D A+GLDW++ + + L V QGNLDP L N+V
Sbjct: 239 LIMFAKGA-FFAREYFKDLDCAAVGLDWTMDIQESRRLVGTNKVLQGNLDPCLLYANNEV 297
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I +L G I NLGHG+ P +P+ V ++TV+S
Sbjct: 298 IIKETQEMLHKFGDK-HIVNLGHGVYPDTNPEKVKRFIETVKS 339
>gi|167564612|ref|ZP_02357528.1| uroporphyrinogen decarboxylase [Burkholderia oklahomensis EO147]
Length = 364
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 187/333 (56%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ RY DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERYPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAMPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++S ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEDI-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPETIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|148262100|ref|YP_001228806.1| uroporphyrinogen decarboxylase [Geobacter uraniireducens Rf4]
gi|189083008|sp|A5GDW7|DCUP_GEOUR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146395600|gb|ABQ24233.1| uroporphyrinogen decarboxylase [Geobacter uraniireducens Rf4]
Length = 339
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 193/346 (55%), Gaps = 16/346 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+++
Sbjct: 1 MNTR---FLDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVSI 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFL 117
QP+ DAAILFSDIL + +G + FV GP + PI T L P ++ +
Sbjct: 57 QPVDILGVDAAILFSDILTPVEPMGMALDFVP--GPVFEHPIRTMADVEKLRIPQMEQDV 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++I ILR++L N + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 115 PYVL---ETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAPEVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ ++ + EYL AQI AG IQIFDT G L ++E Y ++I+ + R+
Sbjct: 172 AALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLAPSDYEKYVLPYTTKLINGLNRQ- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F KGAG ML + +R + +GLDW + L A E+ + VQGNLDP L
Sbjct: 231 -NVPVIHFVKGAGTMLDSVKR-AGGDVMGLDWHINLGKAREVLGDMAVQGNLDPTVLFAP 288
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ V +LD P IFNLGHGI P V P+N + +V+ V
Sbjct: 289 KDVIEQEVKRVLDENAGKPGHIFNLGHGILPTVPPENAIHMVECVH 334
>gi|56461406|ref|YP_156687.1| uroporphyrinogen-III decarboxylase [Idiomarina loihiensis L2TR]
gi|81678281|sp|Q5QVW3|DCUP_IDILO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56180416|gb|AAV83138.1| Uroporphyrinogen-III decarboxylase [Idiomarina loihiensis L2TR]
Length = 358
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 199/345 (57%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C E E+T+QP+
Sbjct: 7 KNDRYLRALAKQPVDRTPVWMMRQAGRYLPEYKEVRGQAGDFMSLCRNTELACEVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F EGP+ DP+ + L P+++ L Y
Sbjct: 67 RRFDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKDPVRSMAAIKNLAVPDMEDELGY- 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K+ + + + + A + L
Sbjct: 126 --VMDAVRAIRRELNGSVPLIGFSGSPWTLATYMVEGGSTKNFSKVKQLMFADPEAMHTL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L++ +YL AQI AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 184 LNVLAESVTQYLNAQIAAGAQSVMIFDTWGGVLSPRDYKAFSLAYMEKIVAGLTREADGR 243
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K G L+ + ++A+G+DW+ LS A + + +QGN+DP L
Sbjct: 244 KVPVTLFTKNGGQWLEAM-AASGADALGVDWTTDLSDARARVGGQVALQGNMDPSVLYAK 302
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +IL GSG +FNLGHGI P+VDP++ ++ +
Sbjct: 303 PARIEEEVQSILQSYGSGTGHVFNLGHGIHPEVDPEHAAAFIEAI 347
>gi|226946536|ref|YP_002801609.1| uroporphyrinogen decarboxylase [Azotobacter vinelandii DJ]
gi|259645146|sp|C1DHQ1|DCUP_AZOVD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226721463|gb|ACO80634.1| uroporphyrinogen decarboxylase [Azotobacter vinelandii DJ]
Length = 355
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 189/341 (55%), Gaps = 16/341 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFL 117
RY DAAILFSDIL + DA+G + F EGPR P + + + +P DL
Sbjct: 65 DRYPQLDAAILFSDILTVPDAMGLGLYFETGEGPRFRKVVSSPADIEALPVPDPERDL-- 122
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y++ ++I R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A
Sbjct: 123 GYVMAAVRTI---RRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAM 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL QI AG +QIFD+ G L ++ ++ + RI+ + R++
Sbjct: 180 HALLDKLARAVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMKRIVDGLIREH 239
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
+ I F KG G L+ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 EGRRVPVILFTKGGGLWLEAMAG-SGAEALGLDWTCDIGDARARVGGKVALQGNMDPSVL 298
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G+G +FNLGHGITP+VDP +
Sbjct: 299 YANPAAIRAEVARILARYGAGSGHVFNLGHGITPEVDPAHA 339
>gi|167571754|ref|ZP_02364628.1| uroporphyrinogen decarboxylase [Burkholderia oklahomensis C6786]
Length = 364
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 187/333 (56%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ RY DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERYPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++S ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEDI-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPETIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|254797288|ref|YP_003082130.1| uroporphyrinogen decarboxylase [Neorickettsia risticii str.
Illinois]
gi|254590528|gb|ACT69890.1| uroporphyrinogen decarboxylase [Neorickettsia risticii str.
Illinois]
Length = 322
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 181/325 (55%), Gaps = 20/325 (6%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGRYLPEY +I KK F MC +P+ E+TLQPIRR++ DAAI+FSDILV+
Sbjct: 9 WFMRQAGRYLPEYLEISKKM-TFFQMCESPKIASEITLQPIRRFDLDAAIIFSDILVLPR 67
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNI---DLFLNYLLPIFQSISILRKKLPNHIT 139
ALG N+ ++ GP ++ I+ NPN D+F + P +I+I RK LP + +
Sbjct: 68 ALGCNIDIKKSIGPIIERIS-------NPNELTHDVFEEKISPTLNAIAITRKSLPENKS 120
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G PWTVA Y+I GG+ K + + F + F ++ L+D + +YL Q+ G
Sbjct: 121 LIGFAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNEQVKHG 180
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
D +QIF++ A +EFE + RI S++ + I F KGAG Y +
Sbjct: 181 ADFVQIFESFAWAASSNEFEEFIIGPTRRIASSI-----DVPVIGFPKGAGVSYLQYVKE 235
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
T + I D S+PL + ++ LQ +QGNLDP L + + I+D FI
Sbjct: 236 TSVDVISTDHSLPLDWIVDNLQTHAVIQGNLDPYLLAFNKKEALLQTERIIDAFSGKNFI 295
Query: 319 FNLGHGI---TPQVDPKNVLDLVKT 340
FNLGHGI TP + VLD +++
Sbjct: 296 FNLGHGIYKETPLSSVEAVLDFIRS 320
>gi|88608180|ref|YP_506832.1| uroporphyrinogen decarboxylase [Neorickettsia sennetsu str.
Miyayama]
gi|123491245|sp|Q2GCG4|DCUP_NEOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|88600349|gb|ABD45817.1| uroporphyrinogen decarboxylase [Neorickettsia sennetsu str.
Miyayama]
Length = 324
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 178/324 (54%), Gaps = 20/324 (6%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGRYLPEY +I K+ F MC +PE E+TLQPI+R++ DAAI+FSDILV+
Sbjct: 11 WFMRQAGRYLPEYLKISKEM-TFFQMCESPEIASEITLQPIKRFDLDAAIVFSDILVLPR 69
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPN---IDLFLNYLLPIFQSISILRKKLPNHIT 139
ALG N+ ++ GP ++ I NPN D F + P +I+I RK LP + +
Sbjct: 70 ALGCNIDIKKSTGPVIERIN-------NPNWLTYDAFEEKISPTLNTIAITRKSLPQNKS 122
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G PWTVA Y+I GG+ K + + F + F ++ L+D + +YL Q+ G
Sbjct: 123 LIGFAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNKQLKHG 182
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
D IQIF++ A +EF+ + RI+S++ + I F KGAG Y +
Sbjct: 183 ADFIQIFESFAWAASSNEFKEFIVEPTRRIVSSI-----DVPVIGFPKGAGVSYLQYVKE 237
Query: 260 TDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
T + I D S+PL + A LQ VQGNLDP L + + I+D FI
Sbjct: 238 TSVDVISTDHSLPLDWIADNLQTHAVVQGNLDPYLLAFNKKEALLQTERIVDAFSEKNFI 297
Query: 319 FNLGHGI---TPQVDPKNVLDLVK 339
FNLGHGI TP + VLD ++
Sbjct: 298 FNLGHGIYKETPLSSVEAVLDFIR 321
>gi|149377291|ref|ZP_01895037.1| uroporphyrinogen decarboxylase [Marinobacter algicola DG893]
gi|149358388|gb|EDM46864.1| uroporphyrinogen decarboxylase [Marinobacter algicola DG893]
Length = 356
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+TLQP+
Sbjct: 5 KNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL I DALG + F EGP+ L N ++ L+Y
Sbjct: 65 ERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFRNTVRSAADVAALPKINAEVDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YMI GG KD + + Y + L
Sbjct: 124 --VMNAVSTIRGALNGSVPLIGFSGSPWTLATYMIEGGSSKDFREAKKLMYGQPEVMHQL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL QI AG +QIFDT G L ++ ++ + +I++ + R+
Sbjct: 182 LDHLADSVIDYLNGQIRAGAQAVQIFDTWGGVLSSWAYQEFSLNYMKKIVAGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F K G L++ + ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RVPVILFTKNGGQWLESIAE-SGADAVGLDWTTDIGKARARIGDQVALQGNMDPAMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G+GP IFNLGHGITP VDP++ ++ V
Sbjct: 301 PERIRQEVADILSRYGTGPGHIFNLGHGITPDVDPEHAGAFIRAV 345
>gi|119946828|ref|YP_944508.1| uroporphyrinogen decarboxylase [Psychromonas ingrahamii 37]
gi|166234276|sp|A1SZJ4|DCUP_PSYIN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119865432|gb|ABM04909.1| uroporphyrinogen decarboxylase [Psychromonas ingrahamii 37]
Length = 354
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 195/337 (57%), Gaps = 11/337 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQDVDKTPVWMMRQAGRYLPEYKKVRAQAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F E EGP++ PIT ++ L+ P+ + L Y
Sbjct: 65 RRFDLDAAILFSDILTIPDAMGLGLYFAEGEGPKLKRPITCKKDVDNLIMPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ + + L
Sbjct: 124 --VMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AG + +FDT G L ++++++ + + +I++ ++R Y
Sbjct: 182 LDKLADSVIDYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMTKIVAGLQRSYEGQ 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K G L+ T +AIGLDW++ ++ A + +QGN+DP L
Sbjct: 242 KIPVTLFTKNGGQWLEAIAD-TGCDAIGLDWTIDMASAKARVGDRVVLQGNMDPSMLYAT 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKN 333
+ + V IL G G +FNLGHGI V P+N
Sbjct: 301 PERIRQEVATILASFGKGNGHVFNLGHGIHLDVPPEN 337
>gi|163748637|ref|ZP_02155890.1| uroporphyrinogen decarboxylase [Shewanella benthica KT99]
gi|161331747|gb|EDQ02551.1| uroporphyrinogen decarboxylase [Shewanella benthica KT99]
Length = 354
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ IR + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLQQPVDRTPVWMMRQAGRYLPEYKAIRAQAGDFMSLCRDKDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGPR P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIRKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPITLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGDKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ IL G G +FNLGHGI VDP++ +K+V
Sbjct: 301 PERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPEHAGAFIKSV 345
>gi|296207791|ref|XP_002750795.1| PREDICTED: uroporphyrinogen decarboxylase [Callithrix jacchus]
Length = 367
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 186/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPTVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMAYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG +Q+F++HAG LG H F +A + + V+ + A
Sbjct: 194 ILTDALIPYLVGQVVAGAQALQLFESHAGHLGPHLFNKFALPYIRDVAKRVKARLQEAGL 253
Query: 243 -----ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ M V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEMGQLVKQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|311103601|ref|YP_003976454.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans A8]
gi|310758290|gb|ADP13739.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans A8]
Length = 357
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 187/330 (56%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYRQ R + +F+ + PEY E+TLQP+ R++ DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYRQTRARAGSFMGLAQNPEYASEVTLQPLERFDLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F E EGPR P+ T+E L P++D L Y +F ++ +R+ L
Sbjct: 84 PHAMGLGLDFAEGEGPRFARPVRTEEDVARLEVPDMDK-LRY---VFDAVRTIRRDLDGK 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L+ ++ + +YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMVEGQGSDDYRLIKTMLYARPDLLHRILEINAEATLQYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ ++++ ++R++ + I F KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLKREHEGRRVPAIVFTKGGGQWLEQ 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
++A+GLDW+V L+ A + QGNLDPM L G + +LD
Sbjct: 260 I-AACGADAVGLDWTVDLAAARRRTGDSVAFQGNLDPMALFGGGPAIRAEARRVLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+G G +FNLGHGI+ P+ V +LV V
Sbjct: 319 VGKGGHVFNLGHGISRFTPPEAVAELVDEV 348
>gi|127514350|ref|YP_001095547.1| uroporphyrinogen decarboxylase [Shewanella loihica PV-4]
gi|166234287|sp|A3QIJ0|DCUP_SHELP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126639645|gb|ABO25288.1| uroporphyrinogen decarboxylase [Shewanella loihica PV-4]
Length = 354
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 191/347 (55%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTLDAIKKLAVPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R
Sbjct: 182 LDKLADAVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL G G +FNLGHGI VDP++ +K+V
Sbjct: 301 PERIHEEVRQILAGYGEGSGHVFNLGHGIHQHVDPEHAGAFIKSVHE 347
>gi|197293338|gb|ACH58231.1| uroporphyrinogen decarboxylase [Haemophilus sp. CCUG 30218]
Length = 354
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 195/345 (56%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLRESVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIECKSAVENLPIPDPEEELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R +L I LIGF G+PWT+A+YM+ GG K G+ + Y +S+ + L
Sbjct: 124 --VMNAVRTIRGELKGEIPLIGFSGSPWTLATYMVEGGSSKTFGKIKKMMYSDSKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G LG E+ +++ + + +I+ + R+
Sbjct: 182 LDKLADSITLYLNAQIKAGAQAVMIFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +AIGLDW+V L+ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGLWLEAIAN-TGCDAIGLDWTVNLADAKARVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
++ + V +IL G+G +FNLGHGI P+ PK +D V
Sbjct: 301 SERIEQEVQSILADFGTGSGHVFNLGHGIHQDVPENAPKVFVDAV 345
>gi|18158958|pdb|1JPH|A Chain A, Ile260thr Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 190/345 (55%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 274
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I+FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMITFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 378
>gi|330501508|ref|YP_004378377.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina NK-01]
gi|328915794|gb|AEB56625.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina NK-01]
Length = 355
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 189/339 (55%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSSLADIEALPVPDPEKDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A +
Sbjct: 125 ---VMDAVRTIRRELGGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQALHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSITAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLAYMKKIVDGLVREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ T + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESLAD-TGAEALGLDWTCDIGSARARVGAKVALQGNMDPAVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G+G +FNLGHGITP+VDP +
Sbjct: 301 KPAAIRAEVARILAAYGAGSGHVFNLGHGITPEVDPAHA 339
>gi|154149184|ref|YP_001406819.1| uroporphyrinogen decarboxylase [Campylobacter hominis ATCC BAA-381]
gi|166234241|sp|A7I2S8|DCUP_CAMHC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|153805193|gb|ABS52200.1| uroporphyrinogen decarboxylase [Campylobacter hominis ATCC BAA-381]
Length = 340
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 183/325 (56%), Gaps = 6/325 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R + FL++C + E+T+QP+ DAAILFSDILVI
Sbjct: 16 PVWMMRQAGRYLPEYMKVRNEVGGFLELCKNYKKASEVTIQPVEILGVDAAILFSDILVI 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
+G ++ F++ EGP + E L ++ + L ++ +IS+ R+KLP L
Sbjct: 76 PLEMGMDLHFIKGEGPIFESPVKNENDLAKLSLQKAVKNLQYVYDTISLTREKLPKDKAL 135
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCGAPWT+A+YMI G K + + Y N + +L +++ YL QI +GV
Sbjct: 136 IGFCGAPWTIATYMIEGKGSKTYSVCKKLLYTNPEFLHKILTLITETLKLYLENQIKSGV 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRRL 259
+ +QIFD+ A L F ++ + + I ++ KYP I F KG +GY+ K Y
Sbjct: 196 NTVQIFDSWASALECEAFFEFSWKYIIEICDFIKAKYPQIPIIVFPKGISGYLDKIYGNF 255
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+ G+DWS PL A + L + +QGN++P RL N + + V IL+ + P I
Sbjct: 256 ---DVFGVDWSTPLESASKILSAKYTLQGNMEPCRLYNKNAIK-ESVEQILNTMKGKPHI 311
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHGI P + +N ++ V+
Sbjct: 312 FNLGHGILPDIPVENAKYFIRLVQE 336
>gi|156369798|ref|XP_001628161.1| predicted protein [Nematostella vectensis]
gi|156215130|gb|EDO36098.1| predicted protein [Nematostella vectensis]
Length = 371
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 194/348 (55%), Gaps = 13/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKK-FKNFLDMCYTPEYTVELTLQP 62
+ +IL +G ++ P+W+MRQAGRYLPE+R+ +++ +F + TPE ELTLQP
Sbjct: 14 QNDRILRAAKGESVDRVPVWVMRQAGRYLPEFRKFKEENGADFFKIVQTPEMACELTLQP 73
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFL 117
IRRY+ DAAI+FSDILVI LG V V +GP DP +++ N NI L
Sbjct: 74 IRRYDLDAAIIFSDILVIPQVLGMTVEMVPGKGPHFPEPLNDPSDIEKLNQ-NANISEGL 132
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y ++++I++ R KL + L GF GAPWT+ SYMI GG + ++R + Y + A
Sbjct: 133 GY---VYRAITLTRHKLEGKVPLFGFTGAPWTLMSYMIEGGGSTNFTKSRKWLYAHMEAS 189
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL L+D E+L+ Q AG ++Q+F++H G LG F ++ + +I V+ K
Sbjct: 190 SKLLQILTDAVVEHLVLQARAGAQILQVFESHGGLLGHDMFMLFSLPYLRQIAEKVKEKL 249
Query: 238 -PNA-KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
P+A FAKGA Y +K + + + LDW++ A + +QGNLDP L
Sbjct: 250 GPDAVPMTVFAKGAHYAIKELSQ-CGYDVVSLDWTMSSKEARIVAPTVTLQGNLDPAALY 308
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ ++ V ++ G +I NLGHG+ P DP + + TV S
Sbjct: 309 GSHEDIVYAVKGMVRGFGIQRYIANLGHGMHPDHDPDKLKTFIDTVHS 356
>gi|167838418|ref|ZP_02465277.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis MSMB43]
Length = 364
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGPR P+ T+ L P++ L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPRFAHPVRTEADVAKLAVPDVGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMQRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEDL-AATGVDAVGLDWTVSLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|237654720|ref|YP_002891034.1| uroporphyrinogen decarboxylase [Thauera sp. MZ1T]
gi|237625967|gb|ACR02657.1| uroporphyrinogen decarboxylase [Thauera sp. MZ1T]
Length = 356
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 187/332 (56%), Gaps = 11/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY + RK+ +FL +C +P E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 22 PVWLMRQAGRYLPEYCETRKRAGSFLQLCKSPAMACEVTLQPLARYDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E + N P+ L Y + +++ +R+ L
Sbjct: 82 PDAMGLGLYFAEGEGPRFERPLKDEWEIRNLSAPDPHAELQY---VMDAVAEIRRALDGS 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D+ + + AY + +LD + +YL AQI
Sbjct: 139 VPLIGFSGSPWTLACYMVEGGSSDDYRKVKSLAYSRPDLMHHILDVTAQAVVKYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FD+ G L E ++ ++ + ++++ + R+ + I F KG G L++
Sbjct: 199 AGAQAVMVFDSWGGVLSEAAYKEFSLPYLEQVVAGLIRERDGQRVPSIVFTKGGGLWLES 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ +A+GLDW++ + A L + +QGNLDP L + + +LD G+
Sbjct: 259 IAAI-GCDAVGLDWTMDIGRARRLVGDKVALQGNLDPNVLFAPPEAVATETRRVLDAFGN 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P +FNLGHGI+ P++V LV TV +
Sbjct: 318 HPGHVFNLGHGISQYTPPESVSVLVDTVHAHS 349
>gi|83648604|ref|YP_437039.1| uroporphyrinogen decarboxylase [Hahella chejuensis KCTC 2396]
gi|123530779|sp|Q2S9R0|DCUP_HAHCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83636647|gb|ABC32614.1| uroporphyrinogen decarboxylase [Hahella chejuensis KCTC 2396]
Length = 356
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 195/349 (55%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R + +F+D+C E+ E+T
Sbjct: 1 MSELKNDRFLRALMRQPVDVTPVWMMRQAGRYLPEYRASRARAGSFMDLCKNAEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLF 116
LQP+ R+ DAAILFSDIL I DA+G + F EGPR E L P+ D
Sbjct: 61 LQPLERFELDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVRTEADVNALHMPDADTD 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y++ ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + AY
Sbjct: 121 LGYVM---NAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFREIKKLAYGQPEL 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D A+YL AQI AG +QIFDT G L + ++ + +I+S ++R+
Sbjct: 178 LHLLLDKLADSVADYLNAQIRAGAQAVQIFDTWGGALTAAGYLEFSLAYMKKIVSKLQRE 237
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
I F K G L++ ++A+GLDW+ +S A + +QGN+DP
Sbjct: 238 ADGRPVPVILFTKNGGQWLEHIAD-AGADALGLDWTTEISEARRRVGDRVSLQGNMDPAA 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V+ IL GSG +FNLGHGITP VDP++ + V
Sbjct: 297 LYAPPAAIRDQVSRILASFGSGSGHVFNLGHGITPDVDPEHAKVFIDAV 345
>gi|196008287|ref|XP_002114009.1| hypothetical protein TRIADDRAFT_27704 [Trichoplax adhaerens]
gi|190583028|gb|EDV23099.1| hypothetical protein TRIADDRAFT_27704 [Trichoplax adhaerens]
Length = 368
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 198/344 (57%), Gaps = 13/344 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G P+W MRQAGRYLPE+R++R K + F +C TP E+TLQPIRR+N
Sbjct: 22 ILRAARGEYTEMIPVWAMRQAGRYLPEFREVRSKHE-FFTLCRTPSLACEVTLQPIRRFN 80
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPIT-TQEIYLLNPNIDLFLNYLLPIFQ 125
DA+I+FSDILVI ALG +V + +GP + P+ +++ L ++D+ + L ++
Sbjct: 81 LDASIIFSDILVIPQALGMDVEMIPGKGPTFIRPLEHPKDLKELEHDVDVD-DKLGYVYD 139
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I++ R KL + LIGF G PWT+ +YMI GG + + + + Y+ + LL L
Sbjct: 140 AITLTRHKLEGRVPLIGFAGGPWTLMAYMIEGGGSQTMSKAKQWLYRYEDESHQLLRLLV 199
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---- 241
D++ ++L+ Q+ AG ++Q+F++HAG LG F Y+ + + I V+R+ +AK
Sbjct: 200 DITVKFLVGQVKAGAQLLQVFESHAGYLGRDLFNKYSLQYLRDICKNVKRELVDAKIDPV 259
Query: 242 -FISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I FA+GA Y L+ TD + I +DW++ P ++ + +QGNLDP L
Sbjct: 260 PMIVFARGAHYALQELAS-TDYDVISVDWTIDPKEARNKIGGQSTIQGNLDPCALYANKA 318
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ G+ +I NLGHGI P V+P + V+ V +
Sbjct: 319 KKL--IGKMIAEFGTQRYIANLGHGIYPNVEPSQLDCFVECVHA 360
>gi|332259244|ref|XP_003278697.1| PREDICTED: uroporphyrinogen decarboxylase [Nomascus leucogenys]
Length = 367
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLH 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818]
Length = 737
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 193/341 (56%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL + + P+W+MRQAGRYLPEY I + +F D C TP +TLQP+ R+
Sbjct: 32 ILRAARREDVERVPVWVMRQAGRYLPEYNAIGEGL-DFFDKCRTPALACAITLQPLVRFP 90
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLF--LNYLLPI 123
DAAI+FSDILVI ALG + V+ +GP PIT +E I LN ++D+ L Y +
Sbjct: 91 IDAAIIFSDILVILQALGMHCDMVKGKGPTFPQPITCREDIDALNADVDVHESLGY---V 147
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I++ R +L H+ LIGF GAPWT+ +Y I G K + + + Y++ A + LL
Sbjct: 148 FKAITLTRHRLGGHVPLIGFAGAPWTLFAYAIEGSGSKTFSKAKSWLYKDPEASHRLLSM 207
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
++DV+ YL+AQ+ AG ++Q+FD+ AG L F +AA + RI SAV+ +
Sbjct: 208 ITDVTVRYLVAQVRAGAQLLQVFDSWAGSLSPRHFREFAAPYLVRIASAVKAELGTDAVP 267
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I FAKGA + + +D + + LDW++ P + QGN+DP + +
Sbjct: 268 MICFAKGAHWAF-SLLESSDYDVLSLDWTMDPQEAQRATKSRMAFQGNMDPCAMYGSDDT 326
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V ++ + G+ I N+GHG++P ++P+ V V V
Sbjct: 327 IREEVCRVMSLFGTRGHIANMGHGMSPDMEPRAVAAFVDAV 367
>gi|305665661|ref|YP_003861948.1| uroporphyrinogen decarboxylase [Maribacter sp. HTCC2170]
gi|88710418|gb|EAR02650.1| uroporphyrinogen decarboxylase [Maribacter sp. HTCC2170]
Length = 342
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 199/342 (58%), Gaps = 15/342 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLPE+ +IRKK+ +F C TPE E+T+QPIRRY
Sbjct: 7 LRALKGETVERPPVWMMRQAGRYLPEFIEIRKKY-DFFTRCQTPELASEITVQPIRRYGM 65
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V+ N GP + +PI TQ+ ++ P++ L+Y++ Q
Sbjct: 66 DAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPIQTQKAVDNVIVPDVTEELDYVM---Q 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL + I LIGF G+PWT+ Y + G K + + F + A + LL ++
Sbjct: 123 AIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKTFDKAKEFCFTQPVAAHQLLQKIT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + P I F
Sbjct: 183 DTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSFQYIQQIIDALKEEAP---VIVF 239
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + ++A+G+DW+ A L +QGN DP RL+ +
Sbjct: 240 GKGCWFALNDMAK-SGASALGVDWTCSPKNARYLSGGNITLQGNFDPSRLLSPPAEIKKM 298
Query: 305 VNAILDVLGSGPFIFNLGHGITPQV---DPKNVLDLVKTVRS 343
V +++ G ++ NLGHGI P + + K +D VK +S
Sbjct: 299 VTQMINEFGKDKYVVNLGHGILPNIPLDNAKAFIDAVKEYKS 340
>gi|153873153|ref|ZP_02001827.1| Uroporphyrinogen decarboxylase (URO-D) [Beggiatoa sp. PS]
gi|152070381|gb|EDN68173.1| Uroporphyrinogen decarboxylase (URO-D) [Beggiatoa sp. PS]
Length = 358
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 201/347 (57%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R K K+FL +C TPE E+TLQP+
Sbjct: 5 KNDRFLRALLRQPVDMTPVWMMRQAGRYLPEYRETRAKTKDFLTLCQTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLN-PNIDLFLNYL 120
RR+ DAAILFSDIL I +A+G + F E EGP+ + P+ T E+ L P+ + L Y
Sbjct: 65 RRFPLDAAILFSDILTIPEAMGLGLYFSEGEGPKFERPVRTHAEVEKLGVPDPNEALRY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R +L + LIGF G+PWT+A+YM+ GG K+ + + +++ + L
Sbjct: 124 --VMDAVRLIRHELAGEVPLIGFSGSPWTLATYMVEGGTTKNFSKIKGLMFEHPNTMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG I IFDT G L ++ N++ + + RI++ + R+Y
Sbjct: 182 LDKLAQAVTAYLNAQIAAGAQAIMIFDTWGGILTSRDYLNFSLQYMQRIVAGLTREYEGQ 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F K L++ T +A+GLDW +P+ E + + +QGN++P L
Sbjct: 242 RVPVILFTKDGNEWLEDI-AATGCDAVGLDWKLPIGVVRERIGDKVALQGNMEPSILYAS 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL G G +FNLGHGI P ++P++V V+ V +
Sbjct: 301 PERIRKEVATILASFGHGNGHVFNLGHGIHPDIEPEHVSAFVEAVHT 347
>gi|145220438|ref|YP_001131147.1| uroporphyrinogen decarboxylase [Prosthecochloris vibrioformis DSM
265]
gi|189083013|sp|A4SGN6|DCUP_PROVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145206602|gb|ABP37645.1| uroporphyrinogen decarboxylase [Chlorobium phaeovibrioides DSM 265]
Length = 351
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/344 (36%), Positives = 197/344 (57%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAIREK-TDFLTLCKTPELAAEVTIQPVELMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G +V +E +G ++ P ++ L P++ L Y+L
Sbjct: 67 DAAIIFSDILVVNEAMGMDVEIIETKGIKLSPPIRSQVDIDRLSVPDVHDKLGYVL---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + +++ + + LL +S
Sbjct: 124 AIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMFRDPKMAHMLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V ++Y+ AQ+ AG D IQIFD+ A L E ++ +A + + A++ KYP+ I F
Sbjct: 184 SVISDYVCAQVEAGADAIQIFDSWASALSEDDYREFALPYIKENVQALKTKYPDIPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L++ T +A+GL W + ++ A L +QGN+DP L + +
Sbjct: 244 SKDCNTILEDIAA-TGCDAVGLGWGIDIAKARTILGDRVCLQGNMDPTVLYGTPEKIKAE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL G + +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 303 AGKILKQFGQHTANSGHVFNLGHGILPDVDPANLKLLVEFVKEE 346
>gi|319956754|ref|YP_004168017.1| uroporphyrinogen decarboxylase [Nitratifractor salsuginis DSM
16511]
gi|319419158|gb|ADV46268.1| uroporphyrinogen decarboxylase [Nitratifractor salsuginis DSM
16511]
Length = 346
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 187/321 (58%), Gaps = 15/321 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR++R+K FLD+C+ PE E+TLQP+ DAAILFSDILV+
Sbjct: 19 PVWMMRQAGRYLPEYRKVREKAGTFLDLCHNPELAAEVTLQPVDIVGVDAAILFSDILVV 78
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL------NYLLPIFQSISILRKK 133
+ +G + FV EGP DPI ++E ++D + L ++++I I+R++
Sbjct: 79 PNEMGMKLDFVAGEGPVFADPIRSRE------DLDRLIGGKEAAEKLTYVYETIKIVRER 132
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L + IGF GAPWT+A+YMI G K + + Y + + +L ++DV YL
Sbjct: 133 LADDKAFIGFAGAPWTLATYMIEGQGTKTYTLCKKMMYTDPELLHAILRKVTDVVKLYLE 192
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI +GVD +QIFD+ A + +++ ++ + + I ++ KYP+ I F KG +
Sbjct: 193 KQIESGVDAVQIFDSWASAIEPSKYDEFSWKYMVEIAKYLKEKYPHIPVILFPKGIASFV 252
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + + G+DW P++ A E L + +QGN++P RL + + V+++ +++
Sbjct: 253 ERGWVYGNFDVFGVDWGTPMALAKEKLGERYVLQGNMEPCRL-YSKEATKECVSSLAELM 311
Query: 313 GSGPFIFNLGHGITPQVDPKN 333
G IFNLGHGI P V +N
Sbjct: 312 KDGRHIFNLGHGILPDVPVEN 332
>gi|340181|gb|AAA61258.1| uroporphyrinogen decarboxylase (EC 4.1.1.37) [Homo sapiens]
Length = 367
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 190/345 (55%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V ++GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPSKGPSFPEPLREEQDLEALRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|55586239|ref|XP_513127.1| PREDICTED: uroporphyrinogen decarboxylase isoform 9 [Pan
troglodytes]
gi|114556193|ref|XP_001154880.1| PREDICTED: uroporphyrinogen decarboxylase isoform 8 [Pan
troglodytes]
Length = 367
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|149197859|ref|ZP_01874908.1| uroporphyrinogen decarboxylase [Lentisphaera araneosa HTCC2155]
gi|149139080|gb|EDM27484.1| uroporphyrinogen decarboxylase [Lentisphaera araneosa HTCC2155]
Length = 343
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 200/343 (58%), Gaps = 14/343 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ G PIWLMRQAGRY+PEYR +R+KF +FL+MC E VE+T+QPI +
Sbjct: 4 LLDTALGKKCERTPIWLMRQAGRYMPEYRAVREKF-SFLEMCMQYENAVEVTMQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL +G +++F E GP + +PI E ++ P++ +Y ++
Sbjct: 63 VDAAILFSDILTPLIPMGFDLKFYEGRGPVIHNPIENAEDVSRVVVPDVKKGSDY---VY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++S +RKKL LIGF GAP+TVASY I GG K++ + + F Y +A++ L++ +
Sbjct: 120 DALSAIRKKLSPEKDLIGFSGAPFTVASYAIEGGSSKNYLKIKTFMYTQPKAYDELMNKI 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++++ YL+ Q AG ++QIFD+ G L ++ Y+ +II ++++ I
Sbjct: 180 AEMTCYYLLEQFKAGAQIVQIFDSWGGVLSREDYLKYSHPYTVKIIDFIKKETGGKPVIH 239
Query: 245 FAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVM 301
F KGA + + DS A +G DW++PL+ A +L V QGNLDP L +++
Sbjct: 240 FVKGANAY---FDSVADSQADVLGTDWTLPLNVAKDLCNNSRVLQGNLDPASLFSNKEIL 296
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D + I + G IFNLGHGI P+ +NV +V TV+S
Sbjct: 297 ADKLELIREQAKGLKGHIFNLGHGIMPKTPVENVKFVVDTVKS 339
>gi|39998542|ref|NP_954493.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens PCA]
gi|81700825|sp|Q746R5|DCUP_GEOSL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|39985489|gb|AAR36843.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens PCA]
gi|298507485|gb|ADI86208.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens KN400]
Length = 340
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 189/347 (54%), Gaps = 17/347 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLPEY +R K FL++C TPE E+T+
Sbjct: 1 MNNR---FLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSKC-TFLELCKTPELAAEVTI 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVEN---EGPRMDPITTQEIYLLNPNIDLFL 117
QPI N DAAILFSDIL + +G + FV E P +++ + NP D+
Sbjct: 57 QPIDILNVDAAILFSDILTPVEPMGLKLDFVPGPVFEHPVRTMADVEKLRIPNPEEDVPY 116
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ +I ILR++L + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 117 -----VLDTIKILRRELAGRVPLIGFGGAPFTLACYMVEGKGSKDWANIKRMMYAAPDVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D ++ + EYL AQI AG IQIFDT G L ++E Y ++I+ + R+
Sbjct: 172 AALMDKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLINGLNRQ- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
N I F KGAG ML+ ++ + +GLDW V L A + L + VQGNLDP L
Sbjct: 231 -NTPVIHFVKGAGTMLETVQK-AGGDVMGLDWHVNLGKARDVLGQNMAVQGNLDPTVLYA 288
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+V+ V +LD P IFNLGHGI P V P+N + +V+ V
Sbjct: 289 PKEVIEAEVKRVLDENAGRPGHIFNLGHGILPTVPPENAIHMVECVH 335
>gi|94500403|ref|ZP_01306935.1| uroporphyrinogen decarboxylase [Oceanobacter sp. RED65]
gi|94427438|gb|EAT12416.1| uroporphyrinogen decarboxylase [Oceanobacter sp. RED65]
Length = 354
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 191/344 (55%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R +FLD+C + E+TLQP+
Sbjct: 5 KNDRFLRALLRQPVDRTPIWMMRQAGRYLPEYRASRADAGSFLDLCKNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLL 121
RY DAAILFSDIL I DA+ + F EGP+ + T Q++ L P +D + L
Sbjct: 65 ERYPLDAAILFSDILTIPDAMNLGLYFETGEGPKFKKVVRTEQDVAEL-PIVDTASD-LS 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + Y + +L
Sbjct: 123 YVTNAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHVKAMMYNQPETMHEML 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+ +YL AQI AG +QIFDT G L + ++ ++ R + +I+ + R++ K
Sbjct: 183 NKLALSVTDYLNAQIKAGAQAVQIFDTWGGVLSHNAYQEFSLRYMKQIVEGLMREHEGRK 242
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F KGAG L+ T +A+GLDW+ + A + +QGN+DP L
Sbjct: 243 VPVILFTKGAGQWLELMAD-TGCDALGLDWTTDIGNARRRVGDMVSLQGNMDPSVLYAKP 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V ILD GSG +FNLGHGI VDP + ++ V
Sbjct: 302 ERIREEVKTILDSYGSGTGHVFNLGHGIHQFVDPDHAKAFIEAV 345
>gi|313235519|emb|CBY10974.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 194/344 (56%), Gaps = 12/344 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+IL + +G ++ PIW+MRQAGRYL E+R+ RKK + F ++C PEY E+T+QP+RR+
Sbjct: 11 RILRICRGEEVDRTPIWIMRQAGRYLSEFREYRKKHE-FFEICRNPEYACEVTMQPLRRF 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFLNYLLP 122
+ DA+I+FSDI+VI A+ + +GP P+ T E L+P+++ L Y
Sbjct: 70 DLDASIIFSDIMVIPQAMEMECVMISGKGPTFTSPLDTPEDLDKINLSPDVNKVLQY--- 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +I++ RK + L GF GAPWT+ +YM+ GG K + + + + YQ A LLD
Sbjct: 127 VFDAITLTRKTIGGKQPLFGFVGAPWTLMAYMVEGGGSKTYSKAKKWLYQYPEASEKLLD 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-PNAK 241
L+ V ++L+ Q AG V+Q+F++HA L F + + + RI + V+ K ++
Sbjct: 187 ALTTVCIDFLVGQARAGAQVLQVFESHADALSPELFHKFTLKLLKRIATEVKAKLGKDSP 246
Query: 242 FIS-FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+S F KG +M + + ++ + I +DW++ LEL K VQGNLDP +L +
Sbjct: 247 PVSIFCKGGHFMNNEFVK-SEYDIIQVDWTISREQILEL-KSKVVQGNLDPCQLYAPKEE 304
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +L I NLGHGI P DP ++ + TV E
Sbjct: 305 IEKATREMLKKFEGVRHIANLGHGIYPDTDPDHLRTYIDTVHKE 348
>gi|254457507|ref|ZP_05070935.1| uroporphyrinogen decarboxylase [Campylobacterales bacterium GD 1]
gi|207086299|gb|EDZ63583.1| uroporphyrinogen decarboxylase [Campylobacterales bacterium GD 1]
Length = 346
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 188/328 (57%), Gaps = 10/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +R + NFL++C+ P+ E+TLQPI DAAILFSDILVI
Sbjct: 18 PVWMMRQAGRYLPEYMAVRAEAGNFLNLCHDPKKACEVTLQPIDIVGVDAAILFSDILVI 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN--- 136
D +G ++ F++ GP+ DPI T+ D + L +F +I ++++ L
Sbjct: 78 PDEMGMDLEFIKGFGPKFNDPIKTEADIDRLIGGDEAASKLTYVFDTIKLIKEDLDKRGG 137
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
I LIGF GAPWT+A+YMI G K + + Y N + +L +++V Y+ QI
Sbjct: 138 EIALIGFTGAPWTLATYMIEGEGTKTYNLCKKMMYSNPALLHKILAKVTEVVKLYMEKQI 197
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKN 255
AG+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG ++ K
Sbjct: 198 QAGIDVVQIFDSWAAAIEPSKYDEFSWKYMVEIADYLKGKYPHIPIIMFPKGIPAFLDKV 257
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
Y G+DWS P++ A E L + +QGN++P RL + V AI D++G+
Sbjct: 258 YGNF---EVFGVDWSTPMALAKEKLGDKYILQGNMEPCRLYSKEETTA-CVEAIQDIMGT 313
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N + VK +
Sbjct: 314 KRHIFNLGHGILPDVPVENAIHFVKECQ 341
>gi|121997849|ref|YP_001002636.1| uroporphyrinogen decarboxylase [Halorhodospira halophila SL1]
gi|171769506|sp|A1WVX2|DCUP_HALHL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121589254|gb|ABM61834.1| uroporphyrinogen decarboxylase [Halorhodospira halophila SL1]
Length = 364
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 189/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL Q ++ P+W+MRQAGRYL EYR++R + +F+ +C +PE +T+QP+
Sbjct: 7 KNDRILRAFQRQPVDRTPVWMMRQAGRYLAEYREVRAQAGSFMGLCRSPELAARVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEI-YLLNPNIDLFLNYL 120
RY DAAILFSDIL I +A+G + FV EGP + T +I L P+ L Y
Sbjct: 67 ERYELDAAILFSDILTIPEAMGLGLNFVTGEGPVFEHRVKTAADIDRLPQPSAQKELRY- 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ RK+L + LIGF G+PWT+A+YMI GG K ++ + A + L
Sbjct: 126 --VMDAVAACRKELNGQVPLIGFTGSPWTLATYMIEGGSSKTFAASKSLLFNEPEAAHRL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+D A+YL Q+ AG + IFDT G L + ++ + RI+ + R+
Sbjct: 184 MAKLADTVADYLNGQVEAGAQALMIFDTWGGALDPVRYREFSLAYMQRILEQLPREREGR 243
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T + +GLDW+ L+ A + +QGNLDP L
Sbjct: 244 RIPVTLFTKGGGQWLEDIAD-TGCDGVGLDWTTSLADARRRIGGRVALQGNLDPCMLHAN 302
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+V+ V L+ G GP +FNLGHGI P+ P+NV +++ +
Sbjct: 303 PEVIRREVARCLEEFGHGPGHVFNLGHGIQPETPPENVDAMIRAL 347
>gi|83815293|ref|YP_445821.1| uroporphyrinogen decarboxylase [Salinibacter ruber DSM 13855]
gi|294507723|ref|YP_003571781.1| Uroporphyrinogen decarboxylase [Salinibacter ruber M8]
gi|123528620|sp|Q2S1W0|DCUP_SALRD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83756687|gb|ABC44800.1| uroporphyrinogen decarboxylase [Salinibacter ruber DSM 13855]
gi|294344051|emb|CBH24829.1| Uroporphyrinogen decarboxylase [Salinibacter ruber M8]
Length = 354
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G + P+W+MRQAGRYLPEY+ IRK+ +F ++ TPE E+T+QP+ R+
Sbjct: 11 RLLRTARGEPTDCTPVWMMRQAGRYLPEYQAIRKE-HSFFEVVETPELAAEVTIQPVERF 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPI 123
+ DAAILF DI+V+ +A+G V+ V +GP P+TT + L+ P+++ L + +
Sbjct: 70 SLDAAILFCDIMVVPEAMGLTVKMVSGQGPTFPKPLTTPDEMERLVEPDVESALGH---V 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++++ R +L + LIGF GAPWT+ +YM+ GG K + R + Y++ A LL
Sbjct: 127 FEALTVTRHELAGRVPLIGFSGAPWTLMAYMVEGGGSKSYRAARRWLYRHPDASKALLQR 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+DV EYLI Q+ AG ++Q+FD+ AG F + + I + V+ +P+ +
Sbjct: 187 TTDVIVEYLIRQVDAGAQMLQVFDSWAGLHTPENFRTFCLPYLAEIATRVKAAHPDVPLV 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
FAKGA Y L TD + I LD ++ A + + V QGNLDP L V+
Sbjct: 247 IFAKGAHYALDALAD-TDYDVISLDSTMDPDAARDTVGDRAVLQGNLDPCALYAPPDVLR 305
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L G I NLGHG+ P DP++ V V
Sbjct: 306 REVQHMLAGFGPHHHIGNLGHGMLPDHDPEHARVFVDAVHEHS 348
>gi|251836950|pdb|3GW0|A Chain A, Urod Mutant G318r
Length = 367
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIRQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|311693375|gb|ADP96248.1| uroporphyrinogen decarboxylase [marine bacterium HP15]
Length = 354
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+TLQP+
Sbjct: 5 KNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL I DALG + F EGP+ E L N ++ L+Y
Sbjct: 65 ERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFRNTIRSEADVAALPKINAEVDLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YMI GG KD + + Y L
Sbjct: 124 --VMNAVSTIRGALNGSVPLIGFSGSPWTLATYMIEGGSSKDFREAKKLMYGQPEVMRRL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ +YL QI AG +QIFDT G L +E ++ R + +I+ + R+
Sbjct: 182 LDHLAGAVIDYLNGQIKAGAQAVQIFDTWGGVLSSWAYEEFSLRYMKKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F K G L++ + ++A+GLDW+ + A + +QGN+DP L
Sbjct: 242 RVPVILFTKNGGQWLESIAD-SGADAVGLDWTTDIGNARARIGDRVALQGNMDPAMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG IFNLGHGITP VDP++ ++ V
Sbjct: 301 PERIRQEVADILRRFGSGNGHIFNLGHGITPDVDPEHAKAFIEAV 345
>gi|283956638|ref|ZP_06374117.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
1336]
gi|283791887|gb|EFC30677.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
1336]
Length = 340
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 192/328 (58%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI + DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILDVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+ F + EGP D PI+T E L + N LNY ++ ++ + R+KL +
Sbjct: 76 PLEMGMNLHFEKGEGPVFDNPISTLEDLEKLDDQNAHKKLNY---VYDALKLTREKLSQN 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQVLKLYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + +QIFD+ A L +F ++ + I + ++ KY N I F KG +GY+
Sbjct: 193 AGANAVQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYSNIPVILFPKGISGYL---D 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
R + + G+DWS PL A + L + +QGN++P RL N + +GV IL + +
Sbjct: 250 RIDGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLYDKNAIK-EGVEKILKTMQNK 308
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 309 AHIFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|313216749|emb|CBY37999.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 194/344 (56%), Gaps = 12/344 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+IL V +G ++ PIW+MRQAGRYL E+R+ RKK + F ++C PEY E+T+QP+RR+
Sbjct: 11 RILRVCRGEEVDRTPIWIMRQAGRYLSEFREYRKKHE-FFEICRNPEYACEVTMQPLRRF 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNYLLP 122
+ DA+I+FSDI+VI A+ + +GP P+ T E L+P+++ L Y
Sbjct: 70 DLDASIIFSDIMVIPQAMEMECVMIPGKGPTFTTPLDTPEDLDKINLSPDVNKVLQY--- 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +I++ RK + L GF GAPWT+ +YM+ GG K + + + + YQ A LLD
Sbjct: 127 VFDAITLTRKTIGGKQPLFGFVGAPWTLMAYMVEGGGSKTYSKAKKWLYQYPEASEKLLD 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-PNAK 241
L+ V ++L+ Q AG V+Q+F++HA L F + + + RI + V+ K ++
Sbjct: 187 ALTTVCIDFLVGQARAGAQVLQVFESHADALSPELFHKFTLKLLKRIATEVKAKLGKDSP 246
Query: 242 FIS-FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+S F KG +M + + ++ + I +DW++ LEL K VQGNLDP +L +
Sbjct: 247 PVSIFCKGGHFMNNEFVK-SEYDIIQVDWTISREQILEL-KSKVVQGNLDPCQLYAPKEE 304
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +L I NLGHGI P DP ++ + TV E
Sbjct: 305 IEKATREMLKKFEGVRHIANLGHGIYPDTDPDHLRTYIDTVHKE 348
>gi|71051616|ref|NP_000365.3| uroporphyrinogen decarboxylase [Homo sapiens]
gi|2507533|sp|P06132|DCUP_HUMAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3660278|pdb|1URO|A Chain A, Uroporphyrinogen Decarboxylase
gi|40889566|pdb|1R3Q|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
Coproporphyrinogen-I
gi|40889572|pdb|1R3Y|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
Coproporphyrinogen-Iii
gi|251836947|pdb|3GVQ|A Chain A, Urod Single-Chain Dimer
gi|251836948|pdb|3GVR|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
gi|2905794|gb|AAC03563.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|48146069|emb|CAG33257.1| UROD [Homo sapiens]
gi|49457067|emb|CAG46854.1| UROD [Homo sapiens]
gi|55959135|emb|CAI16440.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|119627412|gb|EAX07007.1| uroporphyrinogen decarboxylase, isoform CRA_a [Homo sapiens]
gi|158257186|dbj|BAF84566.1| unnamed protein product [Homo sapiens]
gi|261861380|dbj|BAI47212.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 367
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|82701838|ref|YP_411404.1| uroporphyrinogen decarboxylase [Nitrosospira multiformis ATCC
25196]
gi|123754402|sp|Q2YB59|DCUP_NITMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82409903|gb|ABB74012.1| uroporphyrinogen decarboxylase [Nitrosospira multiformis ATCC
25196]
Length = 365
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 190/333 (57%), Gaps = 17/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYL EY Q R + NFL +C P++ E+T+QP+ R+ DAAILFSDIL I
Sbjct: 22 PVWLMRQAGRYLSEYNQTRARAGNFLALCKNPDFATEVTMQPLARFPLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + P+ + EI L P+ + L Y + ++S +RK L N
Sbjct: 82 PDAMGLGLYFAEGEGPRFERPLREEWEIRALTVPDPAVHLRY---VMDAVSQIRKTLDNR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ G D Q + Y+ + +LD + YL AQI
Sbjct: 139 VPLIGFSGSPFTLACYMVEGAGGTDFRQIKTMLYRRPDLLHHILDINAQAVTAYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS---FAKGAGYMLK 254
+G + IFDT G L ++ ++ R + ++++ +RR Y A+ I F KG G L+
Sbjct: 199 SGAQAVMIFDTWGGALSHAAYQQFSLRYMTQVLAGLRR-YQGAERIPSIVFTKGGGLWLE 257
Query: 255 NYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
+ + DS +A+GLDW+V + A + + +QGNLDP L V+ V IL
Sbjct: 258 S---IADSGCDAVGLDWTVNIGDARRRVGHKVALQGNLDPAVLFAEPGVIAAEVEQILAS 314
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G G IFNLGHGI+ P+N L LV+ V S
Sbjct: 315 FGEGSGHIFNLGHGISQFTPPENALTLVEAVHS 347
>gi|134281436|ref|ZP_01768144.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 305]
gi|134247103|gb|EBA47189.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 305]
Length = 364
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 187/333 (56%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEDL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|60834750|gb|AAX37109.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 368
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|78187834|ref|YP_375877.1| uroporphyrinogen decarboxylase [Chlorobium luteolum DSM 273]
gi|123729990|sp|Q3B1E7|DCUP_PELLD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78167736|gb|ABB24834.1| Uroporphyrinogen decarboxylase HemE [Chlorobium luteolum DSM 273]
Length = 351
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 193/344 (56%), Gaps = 13/344 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE +E+T+QP+
Sbjct: 8 LRALKRQPCSRTPIWVMRQAGRYLPEYRAIREK-TDFLTLCKTPELAMEVTIQPVELMGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAI+FSDILV+ +A+G +V +E +G ++ P I +Q L+ P + L Y+L
Sbjct: 67 DAAIIFSDILVVNEAMGMDVEIIETKGIKLTPPIRSQADINRLIIPEVQDKLGYVL---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +K L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL +S
Sbjct: 124 AIRLTKKVLDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKIS 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V +EY+ AQ+ AG D IQIFD+ A L E ++ +A + + AV+ KYP+ I F
Sbjct: 184 AVISEYVCAQVEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAVKAKYPDVPVIVF 243
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+K +L T +A+GL W + + A L +QGN+DP L + +
Sbjct: 244 SKDCNTILSEIAD-TGCDAVGLGWGIDIKKARTILGDRVCLQGNMDPTVLYGTPEKIKAE 302
Query: 305 VNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 303 AAKVLRQFGQHTAQSGHVFNLGHGILPDVDPANLKLLVEFVKEE 346
>gi|126642407|ref|YP_001085391.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 17978]
Length = 333
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 181/329 (55%), Gaps = 14/329 (4%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+RRY+ DAAILFSDIL I DA
Sbjct: 1 MMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYLLPIFQSISILRKKLPNHITL 140
LG + F EGP+ E + N N L+Y + ++S +R L + L
Sbjct: 61 LGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDY---VMNAVSTIRSALGGQVPL 117
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+PWT+A+YM+ GG K+ + Y + LLD L+D +YL AQI AG
Sbjct: 118 IGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGA 177
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
IQIFD+ G L E+ ++ + +II+ ++R+ + I F KG G L+
Sbjct: 178 QAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMIT 237
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL-DVLGSGP 316
T ++A+GLDW+ PL+ A + +QGNLDP L + V A+L D +G
Sbjct: 238 -TGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGE 296
Query: 317 ---FIFNLGHGITPQVDPKNVLDLVKTVR 342
++ NLGHGIT VDP V TV
Sbjct: 297 KTGYVANLGHGITQWVDPAQPKIFVDTVH 325
>gi|325286454|ref|YP_004262244.1| Uroporphyrinogen decarboxylase [Cellulophaga lytica DSM 7489]
gi|324321908|gb|ADY29373.1| Uroporphyrinogen decarboxylase [Cellulophaga lytica DSM 7489]
Length = 342
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 199/341 (58%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V N GP + +PI T + ++ P+I+ L Y++
Sbjct: 67 DAAILFSDILVIPQAMNIEVEMKPNFGPYLPNPIRTSKDLESVIVPDINSTLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL + I LIGF G+PWT+ Y + G K + + F + N A + LL ++
Sbjct: 124 AIKMTKEKLNDDIPLIGFAGSPWTILCYCVQGQGSKTFDKAKEFCFTNPVAAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + P I+F
Sbjct: 184 DTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSWQYIQQIIDALKDEAP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + ++A+G+DW+ A L +QGN DP RL+ + +
Sbjct: 241 GKGCWFALGDMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPSRLLSPPEDIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 300 VHQMINEFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|328869886|gb|EGG18261.1| uroporphyrinogen decarboxylase [Dictyostelium fasciculatum]
Length = 357
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 198/338 (58%), Gaps = 9/338 (2%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAA 71
+G ++ P+W+MRQAGRYLPE++++R +F +C TPE ++TLQPI RY DA+
Sbjct: 16 KGELVERVPVWIMRQAGRYLPEFKEVRAD-TDFFGVCKTPELACKVTLQPIDRYPGLDAS 74
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISI 129
I+FSDILV+ A+G V+ + +GP P+ T +E+ L +D+ + L +F++I++
Sbjct: 75 IIFSDILVVPQAMGLEVQMIPGKGPHFPQPLKTPEEMSRLIYPVDVH-SSLKYVFEAITL 133
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN--RVFAYQNSRAFNWLLDFLSDV 187
R +L + LIGF GAPWT+ +Y I GG I N + + Y + A + LL L+DV
Sbjct: 134 TRHRLGGRVPLIGFTGAPWTLMAYCIEGGGISGGNLNAAKGWLYNHKEASHKLLRMLTDV 193
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+YL+ QI AG IQ+FD+ AG L H F +A + I VR K+PN I FAK
Sbjct: 194 CIDYLVGQIEAGAQAIQVFDSWAGELSPHLFYEFAQPYLLEIAEKVRAKHPNIPLILFAK 253
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQK-EGPVQGNLDPMRLVVGNQVMIDGV 305
GA + L++ + + +G+DW++ P L +K + +QGNLDP L +++ + V
Sbjct: 254 GANHALESLAANSVYDVLGIDWTIDPTQARLITEKYKKTLQGNLDPAVLYCPKEIVDEQV 313
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ G +I NLGHG+ PQ +P + + + ++
Sbjct: 314 EKMIQGFGIQRYIANLGHGMQPQHNPDSANNFINSIHK 351
>gi|254250968|ref|ZP_04944286.1| Uroporphyrinogen-III decarboxylase [Burkholderia dolosa AUO158]
gi|124893577|gb|EAY67457.1| Uroporphyrinogen-III decarboxylase [Burkholderia dolosa AUO158]
Length = 392
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 187/333 (56%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+ID L Y + ++ +R+ L +
Sbjct: 111 PDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDATLGY---VTDAVREIRRALTDG 167
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 168 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNALAVAAYL 227
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R+++ V+R++ A+ I+F KG G
Sbjct: 228 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIQRVVAQVKREHDGARVPVITFTKGGG 287
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ + +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 288 QWLEQIAAI-GVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVL 346
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 347 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 379
>gi|90416469|ref|ZP_01224400.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2207]
gi|90331668|gb|EAS46896.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2207]
Length = 352
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 192/347 (55%), Gaps = 8/347 (2%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L+ L ++ P+W+MRQAGRYLPEYR +R + +F+ +C E E+T
Sbjct: 1 MSELKNDRFLKALMRRPVDRTPVWMMRQAGRYLPEYRAVRAQAGDFMSLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL I DA+G + F EGP+ P+ T+ ID +
Sbjct: 61 LQPLERYEMDAAILFSDILTIPDAMGLGLYFETGEGPKFRKPVRTEADIDALEVIDTASD 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + +++++R++L + LIGF G+PWT+A+YM+ G +D + + Y +
Sbjct: 121 -LAYVTDAVTMIRRELNGRVPLIGFSGSPWTLATYMVEGQSSRDFARAKTMLYTQPELMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ LS +YL AQI AG V+QIFDT G L + ++ + +I+ + +
Sbjct: 180 QLLEKLSLSVIDYLNAQIRAGAQVVQIFDTWGGALSHAAYAEFSLAYMQKIVDGLISHHD 239
Query: 239 --NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+ I F KG G L+ T +A+GLDWS ++ A + +QGN+DP L
Sbjct: 240 GRDVPVILFTKGGGLWLEKMAD-TGCHALGLDWSTDIAAAKGRVGDRVALQGNMDPAVLR 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
V+ V +IL G+G IFNLGHGITP ++P +V + V
Sbjct: 299 ADPAVIESQVESILKGFGAGSGHIFNLGHGITPDINPDHVKVFIDAV 345
>gi|260813440|ref|XP_002601426.1| hypothetical protein BRAFLDRAFT_224293 [Branchiostoma floridae]
gi|229286721|gb|EEN57438.1| hypothetical protein BRAFLDRAFT_224293 [Branchiostoma floridae]
Length = 368
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 197/348 (56%), Gaps = 19/348 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGRYL E+R +R + F +C TPE E+TLQPIRR+
Sbjct: 15 MLRAARGEKTERVPVWVMRQAGRYLEEFRAMRAE-NEFFKVCQTPELACEVTLQPIRRFQ 73
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDL--FLNYLLPI 123
DAAI+FSDILV+ ALG V + +GP +P+ +++ L+ ++D+ L Y +
Sbjct: 74 LDAAIIFSDILVVPQALGMTVEMIPGKGPSFPEPLKLPEDLSKLDKDVDVNKTLGY---V 130
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I++ R KL + LIGF GAPWT+ YMI GG + + + + Y+ A + LL+
Sbjct: 131 FDAITLTRHKLEGKVPLIGFSGAPWTLMCYMIEGGGSESMSKPKQWLYKYEEASHQLLNI 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA-------ARSVGRIISAVRRK 236
L+ V +YL+ Q+ AG ++Q+F++HAG L F +A AR V + A + K
Sbjct: 191 LTKVIIDYLVGQVIAGAQLLQVFESHAGHLCARTFNTFALPYLSIIARQVEEKVRA-QGK 249
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P I FAKGA Y +++ + + +GLDW+V P + + Q + +QGN+DP L
Sbjct: 250 EP-VPMIIFAKGAHYAIEDLAQ-SGYEVVGLDWTVNPKTARHQTQGKVTLQGNMDPGALY 307
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +L+ G+ I NLGHGI P +DP +V V V S
Sbjct: 308 ASKEEIRTIVREMLEQFGTQQHIANLGHGIYPTIDPDHVEAFVDAVHS 355
>gi|171315820|ref|ZP_02905051.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MEX-5]
gi|171099009|gb|EDT43794.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MEX-5]
Length = 375
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 184/334 (55%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 34 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+I+ L Y+ + I ++ +
Sbjct: 94 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGYVTGAVREIRRALTDGQGR 153
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 154 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 213
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G L
Sbjct: 214 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGGLWL 273
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 274 EEIAS-TGVDAVGLDWTVNLGAARERVAGRVALQGNLDPAILFAPPAAVREQARAVLDSY 332
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P IFNLGHGI+ P +V +LV V S
Sbjct: 333 GNHPGHIFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|301768142|ref|XP_002919490.1| PREDICTED: uroporphyrinogen decarboxylase-like [Ailuropoda
melanoleuca]
Length = 367
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 187/348 (53%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + L +P + L Y
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A +
Sbjct: 134 ---VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQ 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ K
Sbjct: 191 LLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKRVKAKLQE 250
Query: 240 A-----KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
A I FAK + L+ + +GLDW+V A E + K +QGNLDP
Sbjct: 251 AGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCA 309
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 310 LYASEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|107024486|ref|YP_622813.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia AU 1054]
gi|116688135|ref|YP_833758.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia HI2424]
gi|105894675|gb|ABF77840.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia AU 1054]
gi|116646224|gb|ABK06865.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia HI2424]
Length = 392
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 185/334 (55%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+I+ L Y+ + I ++ +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEETLGYVTGAVREIRRALTDGQGR 170
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 171 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 230
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G L
Sbjct: 231 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGGLWL 290
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + V A+LD
Sbjct: 291 EEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQVRAVLDSY 349
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 350 GNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 383
>gi|298207311|ref|YP_003715490.1| uroporphyrinogen decarboxylase [Croceibacter atlanticus HTCC2559]
gi|83849947|gb|EAP87815.1| uroporphyrinogen decarboxylase [Croceibacter atlanticus HTCC2559]
Length = 343
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 195/342 (57%), Gaps = 13/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLPE+ +++ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LKALRGESVERPPVWMMRQAGRYLPEFMELKHKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ---EIYLLNPNIDLFLNYLLPIF 124
DAAILFSDILVI A+ +V GP + PI T E ++ PNID L Y++
Sbjct: 67 DAAILFSDILVIPQAMNIDVEMKPGVGPWLPTPIRTAKQVEQDVIVPNIDETLGYVM--- 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I++ ++KL N + LIGF G+PWT+ Y + G K+ + + F + A + LL +
Sbjct: 124 DAITMTKEKLNNEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPVAAHLLLQKI 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + YL ++ GV+ +Q+FD+ G L +++ ++ + + +II A++ P I+
Sbjct: 184 TDTTIAYLKRKVETGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKDMAP---VIA 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KG + L + + ++A+G+DW++ A + +QGN DP RL + +
Sbjct: 241 FGKGCWFALDEMSK-SGASALGVDWTITAENARKFTNNSITLQGNFDPTRLFSPPKEIKR 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 300 MVTEMIDAFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|1322019|gb|AAC50482.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|1418944|emb|CAA61540.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151813|gb|AAD04571.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151815|gb|AAD04572.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151817|gb|AAD04573.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151819|gb|AAD04574.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151821|gb|AAD04575.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151823|gb|AAD04576.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151825|gb|AAD04577.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151827|gb|AAD04578.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151829|gb|AAD04579.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151831|gb|AAD04580.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151833|gb|AAD04581.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151835|gb|AAD04582.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151837|gb|AAD04583.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151839|gb|AAD04584.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151841|gb|AAD04585.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151843|gb|AAD04586.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151845|gb|AAD04587.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151847|gb|AAD04588.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151849|gb|AAD04589.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151851|gb|AAD04590.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|31323304|gb|AAP44118.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 367
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFLLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA---RSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|281351923|gb|EFB27507.1| hypothetical protein PANDA_008123 [Ailuropoda melanoleuca]
Length = 359
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 187/348 (53%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 7 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + L +P + L Y
Sbjct: 66 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A +
Sbjct: 126 ---VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQ 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ K
Sbjct: 183 LLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKRVKAKLQE 242
Query: 240 A-----KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
A I FAK + L+ + +GLDW+V A E + K +QGNLDP
Sbjct: 243 AGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCA 301
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 302 LYASEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 349
>gi|126451836|ref|YP_001068255.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106a]
gi|167740786|ref|ZP_02413560.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 14]
gi|167826364|ref|ZP_02457835.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 9]
gi|167847882|ref|ZP_02473390.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei B7210]
gi|226193192|ref|ZP_03788802.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pakistan
9]
gi|242317202|ref|ZP_04816218.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106b]
gi|254194682|ref|ZP_04901113.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei S13]
gi|166234236|sp|A3P0Y4|DCUP_BURP0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126225478|gb|ABN89018.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106a]
gi|169651432|gb|EDS84125.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei S13]
gi|225934792|gb|EEH30769.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pakistan
9]
gi|242140441|gb|EES26843.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106b]
Length = 364
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDINAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|308388967|gb|ADO31287.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
alpha710]
gi|325129906|gb|EGC52707.1| uroporphyrinogen decarboxylase [Neisseria meningitidis OX99.30304]
gi|325131985|gb|EGC54684.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M6190]
gi|325135996|gb|EGC58606.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M0579]
gi|325202423|gb|ADY97877.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240149]
gi|325207825|gb|ADZ03277.1| uroporphyrinogen decarboxylase [Neisseria meningitidis NZ-05/33]
Length = 354
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDEAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|170111513|ref|XP_001886960.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638003|gb|EDR02283.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 361
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 193/341 (56%), Gaps = 20/341 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V P+W+MRQAGRYLPE+R++R+ + F ++C +PE E+TLQPI RY
Sbjct: 13 LLRAARGEVTERAPVWVMRQAGRYLPEFRKVRESHE-FFEVCRSPELASEVTLQPIERYT 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR----MDPITTQEIYLLNPNIDLFLNYLL 121
DA+I+FSDILVI A+G V+ N GP +D T E ++D LNY
Sbjct: 72 GLLDASIIFSDILVIPQAMGMEVQM--NPGPYFPHPLDTPTDVEKLASVVDVDKELNY-- 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+FQ+I+ RK L + LIGFCGAPWT+ YMI GG K + + + + ++ LL
Sbjct: 128 -VFQAITRTRKCLGGEVPLIGFCGAPWTLFGYMIEGGGSKTYQKAKTWIFKYPEESKALL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK----- 236
++DV ++L+ Q+ AG ++Q+FD+ AG L H+F ++ ++ I + VRR+
Sbjct: 187 AKIADVCVDFLVGQVKAGAQLLQVFDSTAGELSPHDFSIFSFPTLKYISTNVRRRLVEEN 246
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGA + L + + +GLDW + P+ + K+ +QGN+DP L
Sbjct: 247 LPATPMTLFAKGANHALGLLAEHSGYDVLGLDWCIDPVEARRIVGKKVALQGNMDPNVLY 306
Query: 296 VGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNV 334
G + V + G G +I NLGHGITP VDP+++
Sbjct: 307 GGRDAIESAVQRMCQGFQAGEGGWIANLGHGITPGVDPEDL 347
>gi|53720998|ref|YP_109984.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei K96243]
gi|126439558|ref|YP_001060956.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 668]
gi|167896441|ref|ZP_02483843.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 7894]
gi|167904843|ref|ZP_02492048.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei NCTC
13177]
gi|167913120|ref|ZP_02500211.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 112]
gi|237814339|ref|YP_002898790.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei MSHR346]
gi|254184017|ref|ZP_04890608.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1655]
gi|254259304|ref|ZP_04950358.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710a]
gi|254298709|ref|ZP_04966160.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 406e]
gi|81690183|sp|Q63PI5|DCUP_BURPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234237|sp|A3NF35|DCUP_BURP6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|52211412|emb|CAH37403.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei K96243]
gi|126219051|gb|ABN82557.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 668]
gi|157808574|gb|EDO85744.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 406e]
gi|184214549|gb|EDU11592.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1655]
gi|237504682|gb|ACQ97000.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei MSHR346]
gi|254217993|gb|EET07377.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710a]
Length = 364
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|291399020|ref|XP_002715187.1| PREDICTED: uroporphyrinogen decarboxylase [Oryctolagus cuniculus]
Length = 367
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 188/348 (54%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +PI ++ L +P + L Y
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPIREEQDLERLRDPATVASELGY 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A +
Sbjct: 134 ---VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGGSSTMSQAKRWLYQRPQASHQ 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 191 LLQILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLQE 250
Query: 240 A-----KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
A I FAK + L+ + +GLDW+V A E + K +QGNLDP
Sbjct: 251 AGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVDPKKARERVGKTVTLQGNLDPCA 309
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 310 LYAPKEEIGQLVQQMLDGFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|83719923|ref|YP_443796.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis E264]
gi|167582828|ref|ZP_02375702.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis TXDOH]
gi|167620968|ref|ZP_02389599.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis Bt4]
gi|123536051|sp|Q2STF3|DCUP_BURTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83653748|gb|ABC37811.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis E264]
Length = 364
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 187/333 (56%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEDL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|305431710|ref|ZP_07400879.1| uroporphyrinogen decarboxylase [Campylobacter coli JV20]
gi|304445305|gb|EFM37949.1| uroporphyrinogen decarboxylase [Campylobacter coli JV20]
Length = 340
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 194/330 (58%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R++ +FL +C + E++LQP+ DAAI+FSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMKVRQEAGDFLSLCKDYKRASEVSLQPVDILGVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP PI+T E L + N LNY ++ ++ + R+KLP
Sbjct: 76 PLEMGMNLRFEKGEGPVFQTPISTLEDLNKLDDKNAYKKLNY---VYDALKLTREKLPLD 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHEILNKLTQVLKSYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + +QIFD+ A L +F +++ + + I ++ KYP+ I F KG +GY+ K
Sbjct: 193 AGANAVQIFDSWASALECDKFFDFSFKYMLEISDFIKNKYPHIPVILFPKGISGYLDK-- 250
Query: 257 RRLTDSN--AIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
D N G+DWS PL A + L + +QGN++P RL + + GV IL+++
Sbjct: 251 ---IDGNFDVFGVDWSTPLDLARDKLSHQYTLQGNMEPCRL-YDKKAIKQGVENILEIMQ 306
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IFNLGHGI P + +N ++ V+
Sbjct: 307 NKAHIFNLGHGILPDIPVENAKYFIQLVQE 336
>gi|207079865|ref|NP_001129018.1| uroporphyrinogen decarboxylase [Pongo abelii]
gi|75061970|sp|Q5RDK5|DCUP_PONAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|55726782|emb|CAH90152.1| hypothetical protein [Pongo abelii]
Length = 367
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE E TLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCEPTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLECLRDPEVVASELDY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|302697169|ref|XP_003038263.1| hypothetical protein SCHCODRAFT_72453 [Schizophyllum commune H4-8]
gi|300111960|gb|EFJ03361.1| hypothetical protein SCHCODRAFT_72453 [Schizophyllum commune H4-8]
Length = 359
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 197/338 (58%), Gaps = 15/338 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGRYLPE+R +R + F ++C TPE E+T+QP+RRY
Sbjct: 12 LLRAARGEKTERAPVWVMRQAGRYLPEFRALRAHHE-FFEICRTPELACEITVQPVRRYT 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI A+G V + N GP P+ T ++ L +D+ L +
Sbjct: 71 GLLDAAIIFSDILVIPQAMGMEV--IMNPGPHFPTPLDTPADVEKLPKEVDV-EKELKYV 127
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++++ RK+L + LIGFCGAPWT+ +YM+ GG K + + + ++ + LL
Sbjct: 128 FEALTRTRKELKGEVPLIGFCGAPWTLFAYMVEGGGSKTLQKAKTWLFKYPQESKALLKR 187
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA--- 240
++DV +YL+ Q+ AG ++Q+FD+ AG LG +F ++ ++ +I + VR+K +
Sbjct: 188 IADVCIDYLVGQVKAGAQLLQVFDSWAGELGPDDFAEFSQPTLTQISTGVRQKLTASGIT 247
Query: 241 --KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
FAKGA Y L + + +GLDW + + A ++ + +QGN+DP L G
Sbjct: 248 VPPLTLFAKGANYALGSLAEHAGYDVLGLDWCIDPAEARKIVGGKVALQGNMDPSLLYGG 307
Query: 298 NQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNV 334
+ + V + + G G +I NLGHGITPQVDP+++
Sbjct: 308 REAIERAVKRMSEKFGKEGGWIANLGHGITPQVDPEDL 345
>gi|254186483|ref|ZP_04893000.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pasteur
52237]
gi|157934168|gb|EDO89838.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pasteur
52237]
Length = 410
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 69 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 128
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 129 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 185
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 186 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDINAQAVAAYL 245
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 246 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 305
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 306 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 364
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 365 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 397
>gi|332519548|ref|ZP_08396015.1| uroporphyrinogen decarboxylase [Lacinutrix algicola 5H-3-7-4]
gi|332045396|gb|EGI81589.1| uroporphyrinogen decarboxylase [Lacinutrix algicola 5H-3-7-4]
Length = 341
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 197/341 (57%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVERPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILF DILVI A+ V+ N GP + +PI TQ+ ++ P++ L+Y ++
Sbjct: 67 DAAILFCDILVIPQAMNIEVQMKPNFGPYLPNPIRTQKDVDNVIVPDVKESLSY---VYD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL N I LIGF G+PWT+ Y + G K+ + + F ++N A + LL ++
Sbjct: 124 AIKMTKEKLNNDIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFKNPVAAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + P I+F
Sbjct: 184 DTTIAYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWKYIQQIIDALKDETP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + ++A+G+DW+ A L +QGN DP RL +
Sbjct: 241 GKGCWFALGEMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFSPPAEIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 300 VHQMINDFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|221633364|ref|YP_002522589.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
gi|221156299|gb|ACM05426.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
Length = 376
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 192/337 (56%), Gaps = 10/337 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L + ++ P+WLMRQAGRYLPEYR +R+++ + L++C PE E+TLQP+RRY
Sbjct: 38 LLRACRRKTVDMTPVWLMRQAGRYLPEYRALRERY-SLLELCRQPELAAEVTLQPLRRYP 96
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+F+DIL+ ALG + F E EGP + PI P D + L P+ ++
Sbjct: 97 LDAAIIFADILLPVLALGVPLSFAEGEGPVIGAPIRDPAAVDRLPEPDE--SPLWPVAEA 154
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+R +LP + +IGF GAP+T+ASY+I GG + + + + F A+ LL+ L++
Sbjct: 155 IRIVRAELPERVAVIGFAGAPFTLASYLIEGGSSRQYVRTKRFLLTERSAWERLLERLTE 214
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ YL+ Q+ AG +V+Q+FD+ AG L + + RI++AVR I F+
Sbjct: 215 LTIRYLMLQVRAGAEVVQLFDSWAGALAPAVYRDAVLPWTRRIVAAVREL--GVPVIVFS 272
Query: 247 KG-AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G AGY+ + T ++ IG+DW + L A +QGNLDP L+ + +
Sbjct: 273 TGTAGYL--DLVADTGADVIGVDWRIELDRAWNAIGARAIQGNLDPAWLLAPAEDLRKAA 330
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+LD P IFNLGHG+ P+ P V LV+ V
Sbjct: 331 RDVLDRAAGRPGHIFNLGHGVLPETSPDAVAILVEFV 367
>gi|167921058|ref|ZP_02508149.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei BCC215]
Length = 361
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|187925859|ref|YP_001897501.1| uroporphyrinogen decarboxylase [Burkholderia phytofirmans PsJN]
gi|238058006|sp|B2T7J6|DCUP_BURPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187717053|gb|ACD18277.1| uroporphyrinogen decarboxylase [Burkholderia phytofirmans PsJN]
Length = 366
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 186/330 (56%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNATRGRAGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPR-MDPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + FV EGP+ + P+ T++ L P+ID L Y+ + I ++ +
Sbjct: 83 PDAMGLGLEFVTGEGPKFVRPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y + +LD + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILDVNARSVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + + +++S ++R + K I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGVYQRFSLQYIQQVVSQLKRDHGGEKVPVITFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
T +A+GLDW+V LS A E + + +QGN+DP L + A+LD
Sbjct: 263 DEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSVLFAPPASIRMEARAVLDSF 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPENVAELVDEV 351
>gi|206558444|ref|YP_002229204.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia J2315]
gi|238058005|sp|B4EEZ3|DCUP_BURCJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|198034481|emb|CAR50346.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia J2315]
Length = 364
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+I+ L Y+ + I ++ +
Sbjct: 83 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGYVTGAVREIRRALTDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 263 EEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 322 GNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 355
>gi|78064769|ref|YP_367538.1| uroporphyrinogen decarboxylase [Burkholderia sp. 383]
gi|77965514|gb|ABB06894.1| Uroporphyrinogen decarboxylase HemE [Burkholderia sp. 383]
Length = 392
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 187/337 (55%), Gaps = 16/337 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I+ L Y + ++ +R+ L +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEETLGY---VTGAVREIRRALTDG 167
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 168 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYL 227
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G
Sbjct: 228 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGG 287
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + + +QGNLDP L + + A+L
Sbjct: 288 LWLEEI-AATGVDAVGLDWTVNLGKARERVAGKVALQGNLDPTILFAPPAAVREQARAVL 346
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 347 DSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 383
>gi|296273758|ref|YP_003656389.1| uroporphyrinogen decarboxylase [Arcobacter nitrofigilis DSM 7299]
gi|296097932|gb|ADG93882.1| uroporphyrinogen decarboxylase [Arcobacter nitrofigilis DSM 7299]
Length = 343
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 189/330 (57%), Gaps = 17/330 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R + NFL++C+ P+ E+T+QP+ DAAILFSDILVI
Sbjct: 18 PVWMMRQAGRYLPEYMKVRAQAGNFLNLCHNPKLAAEVTIQPLDIVGVDAAILFSDILVI 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL------NYLLPIFQSISILRKK 133
+ +G ++ F++ EGP DPI T+ +D L + L ++++I +L+++
Sbjct: 78 PNEMGMHLEFIKGEGPIFKDPIKTEA------EVDALLGGSEAADKLTYVYETIKLLKQQ 131
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
LP LIGF GAPWT+A+YMI G K + + Y N + +L +++V Y+
Sbjct: 132 LPEDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSNPELLHKILKKVTEVVKLYME 191
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI AG DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG L
Sbjct: 192 NQIKAGADVVQIFDSWAAAIEPAKYDEFSWKYMVEIADYLKEKYPHIPIIMFPKGVPAFL 251
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + + G+DW P++ A E L + +QGN++P RL + V A+ +++
Sbjct: 252 D--KVYGNFDVFGVDWGTPMALAKEKLGDKYVLQGNMEPCRL-YSKEATTMCVEALQNIM 308
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N + VK +
Sbjct: 309 QGDGHIFNLGHGILPDVPVENAIHFVKECQ 338
>gi|152990235|ref|YP_001355957.1| uroporphyrinogen decarboxylase [Nitratiruptor sp. SB155-2]
gi|166234263|sp|A6Q291|DCUP_NITSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151422096|dbj|BAF69600.1| uroporphyrinogen decarboxylase [Nitratiruptor sp. SB155-2]
Length = 340
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 189/333 (56%), Gaps = 22/333 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++R K +FL +C P+ E+TLQP+ + DAAILFSDILVI
Sbjct: 16 PIWMMRQAGRYLPEYMEVRNKAGDFLTLCKNPKMAAEVTLQPVEILDVDAAILFSDILVI 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP------IFQSISILRKK 133
+G ++RF + EGP P+ T E DL Y P ++++I I+RKK
Sbjct: 76 PLEMGMDLRFEKGEGPVFSKPVRTWE--------DLGSLYEFPEEKLTYVYETIKIVRKK 127
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
LP LIGF GAPWT+A+YM+ G K + + Y + + L+ +++ YL+
Sbjct: 128 LPKDKALIGFSGAPWTLATYMVEGSGSKTYAAIKKLIYTDPEFMHALMIKITEAVKAYLV 187
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYM 252
QI +GV+ +QIFD+ A L + +F ++ + I ++ +YP I F KG AGY+
Sbjct: 188 KQIESGVNAVQIFDSWASALEKEKFFEFSWDYMVDIAEFLKERYPEIPVILFPKGIAGYL 247
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
Y + + G+DW P+ A E L + +QGN++P RL + +GV I++V
Sbjct: 248 DDIYGKF---DVFGVDWGTPIDLAKEKLGNKYVLQGNMEPTRL-YSKEATKEGVEKIVEV 303
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G+ IFNLGHG+ P + +N LV+ V
Sbjct: 304 MGAKEGHIFNLGHGMLPDLPVENAKYLVELVHD 336
>gi|315224330|ref|ZP_07866164.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea F0287]
gi|314945720|gb|EFS97735.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea F0287]
Length = 341
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 190/342 (55%), Gaps = 12/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L VL G V PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 8 LRVLSGEVTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCKTPELAAEITVQPVDIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V + GP + PI T + ++ PNI+ L Y++ +
Sbjct: 67 DAAILFSDILVVPQAMNIEVEMKKGVGPWLPKPIRTAKDVEQVMVPNIEERLGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + ++ L N + LIGF G+PWT+ Y + G +D + + + LL ++
Sbjct: 124 AVKLTKQMLNNRVPLIGFAGSPWTIFCYAVEGSGSRDFSTAKELCFTEPSVAHTLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P K I F
Sbjct: 184 DTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEALA---PFTKVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
AKG Y L +++ A+G+DW+ A EL + V QGN DP RL+ +
Sbjct: 241 AKGCWYALPEMAT-SNAAALGVDWTCAPEIARELTRGKKVLQGNFDPSRLLAPPAEIKQK 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V ++D G +I NLGHGI P V +N + V+ V+S ++
Sbjct: 300 VKEMIDAFGKDHYIANLGHGILPNVPVENAIAFVEAVKSYRL 341
>gi|157373581|ref|YP_001472181.1| uroporphyrinogen decarboxylase [Shewanella sediminis HAW-EB3]
gi|189083023|sp|A8FQD0|DCUP_SHESH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157315955|gb|ABV35053.1| Uroporphyrinogen decarboxylase [Shewanella sediminis HAW-EB3]
Length = 354
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 190/346 (54%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFQRPTDTIDSIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 301 PERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGSFINSVH 346
>gi|224372607|ref|YP_002606979.1| uroporphyrinogen decarboxylase [Nautilia profundicola AmH]
gi|254767700|sp|B9L8M1|DCUP_NAUPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|223588665|gb|ACM92401.1| uroporphyrinogen decarboxylase [Nautilia profundicola AmH]
Length = 340
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 180/317 (56%), Gaps = 9/317 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R+K NFLDM PE E+T+QPI + DAAILFSDIL +
Sbjct: 16 PVWMMRQAGRYLPEYMEVRRKIGNFLDMTRNPEVVAEVTIQPIDILDVDAAILFSDILNL 75
Query: 81 ADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G +RF + GP D T ++I L+ + D L Y +++ + ++R++LP
Sbjct: 76 PMEMGLPLRFEKGVGPVFDKTIDTEEDIEALDSSADEKLEY---VYKGVKLIRERLPEEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YM+ G K + + + Y N + LL F + + EYL QI A
Sbjct: 133 ALIGFAGSPWTIATYMVEGRGSKQYAKIKKMVYSNPMMLHRLLAFNTKETIEYLSKQIDA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + + +FD+ G L + +F ++ + I ++ KYP+ I F+KG G +
Sbjct: 193 GANAVMVFDSWGGALEKEKFFEFSWNYMKEIAKNIKAKYPHIPVILFSKGVGLYMDEMD- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + +G+DW+ P+ AL + K+ +QGN++P RL + V I ++
Sbjct: 252 -GEFDVVGVDWATPIDHALRIFKDNYTLQGNMEPTRL-YSKTATKEAVEKIAGIMKGHRH 309
Query: 318 IFNLGHGITPQVDPKNV 334
IFNLGHGI P V +N
Sbjct: 310 IFNLGHGILPDVPVENA 326
>gi|163787005|ref|ZP_02181452.1| uroporphyrinogen decarboxylase [Flavobacteriales bacterium ALC-1]
gi|159876893|gb|EDP70950.1| uroporphyrinogen decarboxylase [Flavobacteriales bacterium ALC-1]
Length = 341
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 196/341 (57%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V+ N GP + +P+ +Q+ ++ P++ LNY ++Q
Sbjct: 67 DAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPVRSQKDVDNVIVPDVKEALNY---VYQ 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I ++KL + I LIGF G+PWT+ Y + G K+ + + F + N A + LL ++
Sbjct: 124 AIKATKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTNPIAAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AG + +Q+FD+ G L +++ ++ + + +II A++ P I+F
Sbjct: 184 DTTIAYLKEKVKAGCNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKDDAP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + ++A+G+DW+ A L +QGN DP RL +
Sbjct: 241 GKGCWFALNEMSK-SGASALGIDWTCSARNARYLTGGNITLQGNFDPTRLFSPPAEIKRM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 300 VHQMINEFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|251836949|pdb|3GVV|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
gi|281500764|pdb|3GVW|A Chain A, Single-Chain Urod F217y (Yf) Mutation
Length = 367
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q++++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLYESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|67643096|ref|ZP_00441845.1| uroporphyrinogen decarboxylase [Burkholderia mallei GB8 horse 4]
gi|121600162|ref|YP_994628.1| uroporphyrinogen decarboxylase [Burkholderia mallei SAVP1]
gi|124385903|ref|YP_001027560.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10229]
gi|126449299|ref|YP_001082542.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10247]
gi|167000134|ref|ZP_02265957.1| uroporphyrinogen decarboxylase [Burkholderia mallei PRL-20]
gi|254174809|ref|ZP_04881470.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 10399]
gi|254201542|ref|ZP_04907906.1| uroporphyrinogen decarboxylase [Burkholderia mallei FMH]
gi|254206878|ref|ZP_04913229.1| uroporphyrinogen decarboxylase [Burkholderia mallei JHU]
gi|254357433|ref|ZP_04973707.1| uroporphyrinogen decarboxylase [Burkholderia mallei 2002721280]
gi|166234233|sp|A3MQK6|DCUP_BURM7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234234|sp|A2S6J1|DCUP_BURM9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234235|sp|A1V8S5|DCUP_BURMS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121228972|gb|ABM51490.1| uroporphyrinogen decarboxylase [Burkholderia mallei SAVP1]
gi|124293923|gb|ABN03192.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10229]
gi|126242169|gb|ABO05262.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10247]
gi|147747436|gb|EDK54512.1| uroporphyrinogen decarboxylase [Burkholderia mallei FMH]
gi|147752420|gb|EDK59486.1| uroporphyrinogen decarboxylase [Burkholderia mallei JHU]
gi|148026497|gb|EDK84582.1| uroporphyrinogen decarboxylase [Burkholderia mallei 2002721280]
gi|160695854|gb|EDP85824.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 10399]
gi|238524346|gb|EEP87779.1| uroporphyrinogen decarboxylase [Burkholderia mallei GB8 horse 4]
gi|243063938|gb|EES46124.1| uroporphyrinogen decarboxylase [Burkholderia mallei PRL-20]
Length = 364
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGGYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|225010399|ref|ZP_03700871.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-3C]
gi|225005878|gb|EEG43828.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-3C]
Length = 343
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 199/341 (58%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G ++ PP+W+MRQAGRYLPE+ +++ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LKALRGETVSRPPVWMMRQAGRYLPEFMELKDKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
D AILFSDILVI A+ V N GP + PI Q+ ++ P+I L Y++ +
Sbjct: 67 DVAILFSDILVIPQAMNIEVEMKPNFGPYLPHPIRDQKAVDQVIVPDIQETLGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL + + LIGF G+PWT+ Y + G K+ + + F + A + LL ++
Sbjct: 124 AIKMTKEKLNDEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPIAAHTLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL A++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + P I+F
Sbjct: 184 DTTIAYLKAKVAAGVNAVQVFDSWGGMLSPTDYQEFSWQYIQQIIDALKEEAP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDG 304
KG + L+ + + + A+G+DW+ A L + +QGN DP RL+ + +
Sbjct: 241 GKGCWFALREMSQ-SGAAALGVDWTCSAQNARYLSGGKITLQGNFDPSRLMSPPKTIKRM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 300 VHEMIDAFGKDRYIVNLGHGILPNIPLENAGAFIEAVKEYK 340
>gi|109896576|ref|YP_659831.1| uroporphyrinogen decarboxylase [Pseudoalteromonas atlantica T6c]
gi|123361396|sp|Q15ZB1|DCUP_PSEA6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109698857|gb|ABG38777.1| uroporphyrinogen decarboxylase [Pseudoalteromonas atlantica T6c]
Length = 355
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 192/346 (55%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F + EGP+ PIT+ L P+ + L Y
Sbjct: 65 RRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFSKPITSMADIQNLPAPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YMI GG K + + A+ + +A + L
Sbjct: 124 --VMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPQALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++++++ + + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIDAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K AG L++ T + +GLDW++ + A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKNAGMWLESIAA-TGCDGVGLDWTIDIDNAKARVGDKVALQGNMDPSMLYAA 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G GP +FNLGHGI V P+N V V
Sbjct: 301 PERIEQEVQKILAGFGEGPGHVFNLGHGIHLDVPPENAKVFVDAVH 346
>gi|110347606|ref|NP_033504.2| uroporphyrinogen decarboxylase [Mus musculus]
gi|134035904|sp|P70697|DCUP_MOUSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|14198090|gb|AAH08109.1| Uroporphyrinogen decarboxylase [Mus musculus]
gi|74192377|dbj|BAE43002.1| unnamed protein product [Mus musculus]
gi|123121530|emb|CAM23809.1| uroporphyrinogen decarboxylase [Mus musculus]
Length = 367
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 186/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+DV YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPERVGAFVDAV 357
>gi|222053131|ref|YP_002535493.1| uroporphyrinogen decarboxylase [Geobacter sp. FRC-32]
gi|254767696|sp|B9M7T4|DCUP_GEOSF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221562420|gb|ACM18392.1| uroporphyrinogen decarboxylase [Geobacter sp. FRC-32]
Length = 339
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/347 (39%), Positives = 193/347 (55%), Gaps = 18/347 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+
Sbjct: 1 MNTR---FLDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVTI 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFL 117
QP+ DAAILFSDIL + +G + FV GP + PI T L P ++ +
Sbjct: 57 QPVDILGVDAAILFSDILTPVEPMGMALDFVP--GPVFEHPIRTMADVEKLRIPQMEQDV 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++I ILR++L N + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 115 PYVL---ETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ ++ + EYL AQI AG IQIFDT G L ++E + ++I+ + R+
Sbjct: 172 AALMEKVTMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPSDYEKFVLPYTTKLINGLNRQ- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F KGAG ML ++ + +GLDW L A ++ VQGNLDP L
Sbjct: 231 -NVPVIHFVKGAGTMLDTVKK-AGGDVMGLDWHTNLGKARDILGSMAVQGNLDPTVLFAP 288
Query: 298 NQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
N V+ V +LD G SG IFNLGHGI P V P+N + +V+ V
Sbjct: 289 NDVIEKEVKRVLDENGGRSG-HIFNLGHGILPTVPPENAIHMVECVH 334
>gi|119773528|ref|YP_926268.1| uroporphyrinogen decarboxylase [Shewanella amazonensis SB2B]
gi|166234284|sp|A1S2J2|DCUP_SHEAM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119766028|gb|ABL98598.1| Uroporphyrinogen decarboxylase [Shewanella amazonensis SB2B]
Length = 354
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 190/348 (54%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLN-PNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR + T + I L P+ + L Y
Sbjct: 65 RRYELDAAILFSDILTIPDAMGLGLYFEAGEGPRFERKADTLEAIKALPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + Y A + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKRMMYSEPMALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI G + IFD+ G L + ++ R + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIANGAQSVMIFDSWGGALSHSAYREFSLRYMQKIVDGLTREADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L++ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V +
Sbjct: 301 IPRIEEEVEQILAGFGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHEK 348
>gi|261392852|emb|CAX50433.1| uroporphyrinogen decarboxylase (URO-D; UPD) [Neisseria meningitidis
8013]
Length = 354
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|40889571|pdb|1R3W|A Chain A, Uroporphyrinogen Decarboxylase Y164f Mutant In Complex
With Coproporphyrinogen-Iii
Length = 367
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ ++M+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTFMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|170724657|ref|YP_001758683.1| uroporphyrinogen decarboxylase [Shewanella woodyi ATCC 51908]
gi|238058111|sp|B1KN91|DCUP_SHEWM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169810004|gb|ACA84588.1| uroporphyrinogen decarboxylase [Shewanella woodyi ATCC 51908]
Length = 354
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGPR P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 301 PERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGAFINSVH 346
>gi|76809875|ref|YP_331586.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710b]
gi|76579328|gb|ABA48803.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710b]
Length = 405
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 64 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 123
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 124 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 180
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 181 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 240
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 241 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 300
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 301 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 359
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 360 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 392
>gi|321475414|gb|EFX86377.1| uroporphyrinogen decarboxylase [Daphnia pulex]
Length = 348
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 189/344 (54%), Gaps = 11/344 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL G + P+W+MRQAGRYLPE+R R K +F +C TPE E+TLQPI
Sbjct: 9 KNDRILRAAVGEETDKVPVWVMRQAGRYLPEFRATRVK-HDFFSLCRTPEIACEVTLQPI 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNP--NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V EGP IT +++ +L N+D L Y
Sbjct: 68 RRFPLDAAIIFSDILVVPQALGMEVLMQAGEGPVFTSPLITPEDLRVLETPVNVDEKLGY 127
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R KL + LIGF GAPWT+ SYMI GG K +++ + Y+ +
Sbjct: 128 ---VFEAINLTRHKLEGRVPLIGFAGAPWTLMSYMIEGGGSKTMAKSKAWLYRYPTESHK 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+DV ++LI Q+ AG ++Q+F++HA LG F +A + +I VR K N
Sbjct: 185 LLQILTDVIVDFLIGQVKAGAQMLQVFESHAEYLGPEIFAQFALPYIKQIQERVREKV-N 243
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGN 298
F KG + L+ + IGLDW++ P ++ VQGN+DP L
Sbjct: 244 VPMCIFPKGGHFSLEQL-STAGYDIIGLDWTIKPDEGRQKVGSNITVQGNMDPCALYGPK 302
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGI P VDP+++ + +
Sbjct: 303 ENIRAIAKDMVSRFGKHRYIANLGHGIYPDVDPEHLAAFIDGIH 346
>gi|254246702|ref|ZP_04940023.1| Uroporphyrinogen decarboxylase HemE [Burkholderia cenocepacia
PC184]
gi|124871478|gb|EAY63194.1| Uroporphyrinogen decarboxylase HemE [Burkholderia cenocepacia
PC184]
Length = 392
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+ID L Y+ + I ++ +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIDETLGYVTGAVREIRRALTDGQGR 170
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 171 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 230
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G L
Sbjct: 231 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGGLWL 290
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 291 EEIAAI-GVDAVGLDWTVNLGVARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 349
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 350 GNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 383
>gi|241760005|ref|ZP_04758103.1| uroporphyrinogen decarboxylase [Neisseria flavescens SK114]
gi|241319459|gb|EER55889.1| uroporphyrinogen decarboxylase [Neisseria flavescens SK114]
Length = 353
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 189/342 (55%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E+ + + + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERTLQHEVDIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|121603278|ref|YP_980607.1| uroporphyrinogen decarboxylase [Polaromonas naphthalenivorans CJ2]
gi|171769337|sp|A1VJ58|DCUP_POLNA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120592247|gb|ABM35686.1| uroporphyrinogen decarboxylase [Polaromonas naphthalenivorans CJ2]
Length = 369
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 188/342 (54%), Gaps = 20/342 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PVWLMRQAGRYLPEYKATRAKAGSFMGLATNTDYATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F EGPR E + + +N L +F +++ +RK L + L
Sbjct: 83 PDAMGLGLSFALGEGPRFATPVRDEAAVNKLEVP-DMNKLRYVFDAVTSIRKALGGRVPL 141
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+PWT+A YM+ G D+ + YQ + +L +D A YL AQI AG
Sbjct: 142 IGFSGSPWTLACYMVEGSGSDDYRLVKTMLYQRPDLMHKMLAINADAVALYLNAQIEAGA 201
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ IFD+ G L + F ++ R++S ++R++ + F KG G L++ ++
Sbjct: 202 QAVMIFDSWGGVLADAAFHTFSLAYTARVLSQLKREHKGVTIPRLVFTKGGGQWLESMKQ 261
Query: 259 LTDSNAIGLDWSVPLSFALELQKE-GP----VQGNLDPMRLVVGNQVMIDG-VNAILDVL 312
L D +GLDW+V L+ A L E GP +QGNLDP ++ N I+ V A+L+
Sbjct: 262 L-DCEVLGLDWTVNLAKARALVGENGPNAKALQGNLDP-NVLFANPAQIEAEVAAVLNSF 319
Query: 313 G--------SGPF-IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G +GP IFNLGHGI+ P++V LV+ V +
Sbjct: 320 GAPHTDLTQTGPTQIFNLGHGISQHTPPESVEVLVRAVHAHS 361
>gi|15676679|ref|NP_273823.1| uroporphyrinogen decarboxylase [Neisseria meningitidis MC58]
gi|23814024|sp|Q9K041|DCUP_NEIMB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7226013|gb|AAF41194.1| uroporphyrinogen decarboxylase [Neisseria meningitidis MC58]
gi|316983769|gb|EFV62750.1| uroporphyrinogen decarboxylase [Neisseria meningitidis H44/76]
gi|325133705|gb|EGC56361.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M13399]
gi|325140065|gb|EGC62594.1| uroporphyrinogen decarboxylase [Neisseria meningitidis CU385]
gi|325144181|gb|EGC66488.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240013]
gi|325200533|gb|ADY95988.1| uroporphyrinogen decarboxylase [Neisseria meningitidis H44/76]
gi|325206377|gb|ADZ01830.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M04-240196]
Length = 354
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|40889570|pdb|1R3V|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86e In
Complex With Coproporphyrinogen-I
Length = 367
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS+ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSEILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|167818001|ref|ZP_02449681.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 91]
Length = 364
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRIVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|193697420|ref|XP_001952264.1| PREDICTED: uroporphyrinogen decarboxylase-like [Acyrthosiphon
pisum]
Length = 349
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 201/347 (57%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE+R++R ++ +F +C TPE E+TLQPI
Sbjct: 7 KNDRILRAARGEEVDRIPVWVMRQAGRYLPEFRELRSRY-DFFTICRTPELACEVTLQPI 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLF--LNY 119
+RY+ DA+I+FSDILVI ALG V + GP + DP+ ++ LN +ID+ L Y
Sbjct: 66 QRYDLDASIIFSDILVIVQALGMIVEMQPSVGPVIPDPLKEPIDLDRLNQSIDVKQELGY 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R +L + LIGF GAPWT+ YMI GG K + + + Y+
Sbjct: 126 ---VFEAITLTRHRLNGQVPLIGFTGAPWTLMCYMIEGGGSKTMSKAKKWLYKYPEESKK 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KY 237
LL L+D+ +YLI Q++AG ++Q+F+++A L F+ ++ + I S V+ K
Sbjct: 183 LLQILTDIIVKYLIEQVNAGAQMLQVFESNAEYLNSELFDRFSGPYLSAICSRVKNELKG 242
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
+ + FAKG Y +K D + IGLDW++ A ++ +QGNLDP L
Sbjct: 243 NSVPMVVFAKGGHYAMKQLSTF-DYDVIGLDWTIDPDEARKIVGNNITLQGNLDPCSLYG 301
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ + + V ++ +I NLGHGI P VDP+++ ++ V
Sbjct: 302 PSEQIKEMVKSMASKFTKHRYIANLGHGIYPDVDPEHLRVMIDAVHE 348
>gi|53724020|ref|YP_104466.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 23344]
gi|52427443|gb|AAU48036.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 23344]
Length = 405
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 64 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 123
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 124 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 180
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 181 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 240
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R+++ ++R++ A+ I+F KG G
Sbjct: 241 NAQIEAGAQAVMIFDTWGGALADGGYQRFSLDYVRRVLAQLKREHDGARVPAIAFTKGGG 300
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 301 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 359
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 360 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 392
>gi|18158959|pdb|1JPI|A Chain A, Phe232leu Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F A R V + + A R+
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKLALPYIRDVAKQVKARLREAGL 274
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 378
>gi|149925414|ref|ZP_01913678.1| uroporphyrinogen decarboxylase [Limnobacter sp. MED105]
gi|149825531|gb|EDM84739.1| uroporphyrinogen decarboxylase [Limnobacter sp. MED105]
Length = 364
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 188/354 (53%), Gaps = 18/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEYR R K NF+ +C PE E+TLQP+
Sbjct: 8 KNDTFLRALRREATEYTPVWLMRQAGRYLPEYRATRAKAGNFMGLCTNPEAACEVTLQPL 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYL 120
RY DAAILFSDIL + DA+G + F E EGP+ + P+ T+ L P+I L Y
Sbjct: 68 ERYKLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLVTEADVAKLAVPDIGTSLRY- 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A YM+ GG D + + Y+ + +
Sbjct: 127 --VTDAVSTIRGALGGRVPLIGFSGSPWTLACYMVEGGGSSDFRKVKTMLYKRPDLMHRI 184
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++ ++YL AQI AG + IFD+ G L + F+ ++ V +I++++ +
Sbjct: 185 LEVTTEAVSQYLRAQIEAGAQAVMIFDSWGGALADGAFQKFSLNYVKKIVASLPLQANRG 244
Query: 241 KF------ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
F I F KG G L++ + ++A+G+DW+V L A + +QGNLDP
Sbjct: 245 SFTEDIPSIVFTKGGGLWLEDIAS-SGASAVGVDWTVNLGQARARIGDRCAIQGNLDPNV 303
Query: 294 LVVGNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V L+ G +FNLGHGI+ +P +V +V V +
Sbjct: 304 LFAEPAQIEAEVAKALESFGVPQAGAGHVFNLGHGISQFTNPDSVEVMVNAVHA 357
>gi|257453451|ref|ZP_05618746.1| uroporphyrinogen decarboxylase [Enhydrobacter aerosaccus SK60]
gi|257449203|gb|EEV24151.1| uroporphyrinogen decarboxylase [Enhydrobacter aerosaccus SK60]
Length = 369
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 195/369 (52%), Gaps = 34/369 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL ++ ++ P+W+MRQAGRYLPEY+Q R + +FL +C + E+T+QP
Sbjct: 9 KNDRILRAMRFESVDVTPVWMMRQAGRYLPEYKQTRAQAGDFLSLCKNTDLATEVTIQPF 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDL--FLNY 119
RR+ DAAILFSDIL I DALG + F EGP+ + E+ L P + + L+Y
Sbjct: 69 RRFELDAAILFSDILTIPDALGLGLYFEAGEGPKFHKTVRSMAEVEAL-PTVAMSDALDY 127
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++++ +R L L GF G+PWT+A+YMI GG K++ + Y +
Sbjct: 128 ---VMKAVTSIRHALAGRAPLFGFSGSPWTLATYMIEGGSSKEYRYAKAMLYGEPETLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D +YL+AQI AG ++QIFD+ G L +F ++ +I++A++ YP
Sbjct: 185 LLAKITDAVIDYLLAQIAAGAQLVQIFDSWGGALAHRQFVEFSHHYNTKIVAAIKATYPE 244
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL----SFALELQKEG-----------P 284
+ F KG G L + + + ++A+GLDW++PL S E QK
Sbjct: 245 VPVVLFTKGGGLWL-DTQCHSGADALGLDWTMPLDRARSIVFEQQKALTKLHKKRHTGIA 303
Query: 285 VQGNLDPMRLVVG-------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+QGNLDP L +M+ ++ D G +I NLGHGI V+P +
Sbjct: 304 LQGNLDPATLFASPEHIRQQTHLMLQDAYSLGDKTG---YIANLGHGINQWVNPDHAKAF 360
Query: 338 VKTVRSEKI 346
+ V K+
Sbjct: 361 IDAVHEYKL 369
>gi|261378810|ref|ZP_05983383.1| uroporphyrinogen decarboxylase [Neisseria cinerea ATCC 14685]
gi|269144790|gb|EEZ71208.1| uroporphyrinogen decarboxylase [Neisseria cinerea ATCC 14685]
Length = 354
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPEF 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADFGQGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|167721814|ref|ZP_02405050.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei DM98]
Length = 364
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 185/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDINAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLVQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|170731481|ref|YP_001763428.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia MC0-3]
gi|169814723|gb|ACA89306.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia MC0-3]
Length = 375
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 34 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+ID L Y+ + I ++ +
Sbjct: 94 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIDETLGYVTGAVREIRRALTDGQGR 153
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 154 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 213
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++S ++R++ + I+F KG G L
Sbjct: 214 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHDGERVPVITFTKGGGLWL 273
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 274 EEIAAI-GVDAVGLDWTVNLGVARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 332
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 333 GNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 366
>gi|146305589|ref|YP_001186054.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina ymp]
gi|166234274|sp|A4XPQ6|DCUP_PSEMY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145573790|gb|ABP83322.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina ymp]
Length = 355
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 189/339 (55%), Gaps = 12/339 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKAVGSLADIEALPVPDPEKDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLAYMKKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RRVPVILFTKGGGLWLESMAD-SGAEALGLDWTCDIGSARARVGSKVALQGNMDPAVLYA 300
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ V IL G+G +FNLGHGITP+VDP +
Sbjct: 301 KPAAIRAEVARILAAYGAGSGHVFNLGHGITPEVDPAHA 339
>gi|325142014|gb|EGC64446.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 961-5945]
gi|325198000|gb|ADY93456.1| uroporphyrinogen decarboxylase [Neisseria meningitidis G2136]
Length = 354
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|217424005|ref|ZP_03455505.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 576]
gi|217393068|gb|EEC33090.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 576]
Length = 364
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 185/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLRLAKQPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 EGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDINAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFDT G L + ++ ++ V R++ ++R++ A+ I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLVQLKREHDGARVPAIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEL-AATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|221214283|ref|ZP_03587255.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD1]
gi|221165938|gb|EED98412.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD1]
Length = 392
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 167
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 168 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 227
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ Y+ V R+++ ++R++ + I+F KG G
Sbjct: 228 NAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYVRRVVAQLKREHDGQRVPVITFTKGGG 287
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V + A E + +QGNLDP L V+ + A+L
Sbjct: 288 LWLEEI-AATGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILFAPPAVVREQARAVL 346
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 347 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 379
>gi|40889567|pdb|1R3R|A Chain A, Uroporphyrinogen Decarboxylase With Mutation D86n
Length = 367
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 189/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS+ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSNILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|167622424|ref|YP_001672718.1| uroporphyrinogen decarboxylase [Shewanella halifaxensis HAW-EB4]
gi|189083021|sp|B0TR87|DCUP_SHEHH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167352446|gb|ABZ75059.1| uroporphyrinogen decarboxylase [Shewanella halifaxensis HAW-EB4]
Length = 354
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYGT 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ IL G G +FNLGHGI VDP+ + +V
Sbjct: 301 PERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPERAGSFINSV 345
>gi|218767900|ref|YP_002342412.1| uroporphyrinogen decarboxylase [Neisseria meningitidis Z2491]
gi|23814021|sp|Q9JV52|DCUP_NEIMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121051908|emb|CAM08214.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
Z2491]
gi|319410147|emb|CBY90483.1| uroporphyrinogen decarboxylase (URO-D; UPD) [Neisseria meningitidis
WUE 2594]
Length = 354
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 188/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|170699478|ref|ZP_02890521.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria IOP40-10]
gi|170135627|gb|EDT03912.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria IOP40-10]
Length = 375
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 185/337 (54%), Gaps = 16/337 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 34 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I+ L Y + ++ +R+ L +
Sbjct: 94 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGY---VTGAVREIRRALTDG 150
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 151 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYL 210
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++ ++R++ + I+F KG G
Sbjct: 211 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQLKREHDGERVPVITFTKGGG 270
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 271 LWLEEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVL 329
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 330 DSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|251836951|pdb|3GW3|A Chain A, Human Urod Mutant K297n
Length = 367
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGNTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|56477020|ref|YP_158609.1| uroporphyrinogen decarboxylase [Aromatoleum aromaticum EbN1]
gi|81677487|sp|Q5P4Q4|DCUP_AZOSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56313063|emb|CAI07708.1| Uroporphyrinogen decarboxylase [Aromatoleum aromaticum EbN1]
Length = 356
Score = 219 bits (559), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 187/328 (57%), Gaps = 11/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY + R++ +FLD+C +P E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 22 PLWMMRQAGRYLPEYCETRRRAGSFLDLCKSPALACEVTLQPLARYDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIY-LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + P+ + EI L+ P+ L Y + +++ +R+ L
Sbjct: 82 PDAMGLGLYFAEGEGPRFERPLRDEWEIRNLVAPDPHAELQY---VMDAVAEIRRALGGS 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D+ + + AY + +L +D YL AQI
Sbjct: 139 VPLIGFSGSPWTLACYMVEGGSSDDYRRIKTMAYTRPDLLHHVLRVTADSVVAYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
+G + +FD+ G L E + ++ + R+++ + R+ + I F KG G L++
Sbjct: 199 SGAQAVMVFDSWGGVLSEAAYREFSLPYLERVVAGLIRERDGERIPSIVFTKGGGLWLES 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ +A+GLDW++ + A L + +QGNLDP L + + +LD G
Sbjct: 259 IAAI-GCDAVGLDWTMDIGRARALVGDKVALQGNLDPAILFAPPETIATEAKRVLDAFGP 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P +FNLGHGI+ P+ V LV TV
Sbjct: 318 HPGHVFNLGHGISQFTPPEAVSVLVDTV 345
>gi|85711870|ref|ZP_01042925.1| Uroporphyrinogen-III decarboxylase [Idiomarina baltica OS145]
gi|85694267|gb|EAQ32210.1| Uroporphyrinogen-III decarboxylase [Idiomarina baltica OS145]
Length = 361
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 197/346 (56%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L LQ ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 12 KNDRYLRALQKQPVDRTPIWMMRQAGRYLPEYKATRAEAGDFMSLCKNTELACEVTLQPL 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F + EGP+ P+ T+ L P++ L Y
Sbjct: 72 RRFDLDAAILFSDILTIPDAMGLGLYFEKGEGPKFSRPLRTEADVKGLTVPDMSDELRY- 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S++R++L + LIGF G+PWT+A+YM+ GG K+ + + + + +
Sbjct: 131 --VTDAVSLIRQELDGKVPLIGFSGSPWTLATYMVEGGSTKNFSKVKQMLFAEPELMHHV 188
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
L+ L+D +YL AQI+AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 189 LNVLADSVIDYLNAQINAGAQAVMIFDTWGGVLSPRDYKQFSLAYMEKIVAGLIREQDGN 248
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F K G L+ + ++ +G+DW+ LS A + + +QGN+DP L
Sbjct: 249 HVPVTLFTKNGGQWLEAMAQ-AGADGLGVDWTTDLSDARARVGDQVALQGNMDPSVLYAS 307
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
Q + + V IL+ G G +FNLGHGI P+V+P + ++ V
Sbjct: 308 PQRIEEEVQLILESYGEGSGHVFNLGHGIHPEVNPDHAGAFIEAVH 353
>gi|157960256|ref|YP_001500290.1| uroporphyrinogen decarboxylase [Shewanella pealeana ATCC 700345]
gi|189083022|sp|A8GZL8|DCUP_SHEPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157845256|gb|ABV85755.1| uroporphyrinogen decarboxylase [Shewanella pealeana ATCC 700345]
Length = 354
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDSIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYGT 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ IL G G +FNLGHGI VDP+ + +V
Sbjct: 301 PERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPERAGSFINSV 345
>gi|172044378|sp|A4JA40|DCUP_BURVG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 364
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 183/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLDRFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+ID L Y+ + I ++ +
Sbjct: 83 PDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDETLGYVTGAVREIRRALTDGQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R+++ ++R++ + I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGERVPVITFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 263 EEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P +V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTSPDHVAELVDEV 351
>gi|134294243|ref|YP_001117978.1| uroporphyrinogen decarboxylase [Burkholderia vietnamiensis G4]
gi|134137400|gb|ABO53143.1| uroporphyrinogen decarboxylase [Burkholderia vietnamiensis G4]
Length = 375
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 183/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 34 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLDRFPLDAAILFSDILTI 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+ID L Y+ + I ++ +
Sbjct: 94 PDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDETLGYVTGAVREIRRALTDGQGR 153
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 154 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 213
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R+++ ++R++ + I+F KG G L
Sbjct: 214 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGERVPVITFTKGGGLWL 273
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 274 EEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 332
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P +V +LV V
Sbjct: 333 GNHPGHVFNLGHGISQFTSPDHVAELVDEV 362
>gi|319953179|ref|YP_004164446.1| uroporphyrinogen decarboxylase [Cellulophaga algicola DSM 14237]
gi|319421839|gb|ADV48948.1| Uroporphyrinogen decarboxylase [Cellulophaga algicola DSM 14237]
Length = 341
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 197/341 (57%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE+ +I+K++ +F C TP+ E+T+QPIRR+
Sbjct: 8 LRALKGEIVERPPVWMMRQAGRYLPEFMEIKKEY-DFFTRCQTPDLASEITVQPIRRFGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V+ + GP + +PI TQ+ ++ P++D+ L+Y++ +
Sbjct: 67 DAAILFSDILVIPQAMNIEVQMKPDFGPYLPNPIRTQKDVDAVIVPDVDVALDYVM---K 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I ++KL N I LIGF G+PWT+ Y + G K+ + + F + A + LL ++
Sbjct: 124 AIKATKEKLNNEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFMQPLAAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL A++ AGV+ +QIFD+ G L ++ ++ + +II A++ + P I F
Sbjct: 184 DTTIAYLKAKVKAGVNAVQIFDSWGGMLSPTDYTEFSWNYIQQIIDALKEETP---VIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + + A+G+DW+ A L +QGN DP RL+ +
Sbjct: 241 GKGCWFALGDMAK-SGAAALGVDWTCSARNARYLTGGNITLQGNFDPSRLLSPPADIKRM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +++ G ++ NLGHGI P V N + V+ K
Sbjct: 300 VTQMINEFGKDKYVVNLGHGILPNVPVDNARAFIDAVKEYK 340
>gi|313668740|ref|YP_004049024.1| uroporphyrinogen decarboxylase [Neisseria lactamica ST-640]
gi|313006202|emb|CBN87664.1| putative uroporphyrinogen decarboxylase [Neisseria lactamica
020-06]
Length = 354
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 187/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 IIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEAARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|254669887|emb|CBA04381.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha153]
Length = 354
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|115350157|ref|YP_771996.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria AMMD]
gi|115280145|gb|ABI85662.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria AMMD]
Length = 392
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 185/337 (54%), Gaps = 16/337 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I+ L Y + ++ +R+ L +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGY---VTGAVREIRRALTDG 167
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 168 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYL 227
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++ ++R++ + I+F KG G
Sbjct: 228 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQLKREHDGERVPVITFTKGGG 287
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V L A E + +QGNLDP L + + A+L
Sbjct: 288 LWLEEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVL 346
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 347 DSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 383
>gi|172059176|ref|YP_001806828.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MC40-6]
gi|171991693|gb|ACB62612.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MC40-6]
Length = 375
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 183/334 (54%), Gaps = 10/334 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 34 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+I+ L Y+ + I ++ +
Sbjct: 94 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGYVTGAVREIRRALTDGQGR 153
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL AQ
Sbjct: 154 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYLNAQ 213
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + R++ ++R++ + I+F KG G L
Sbjct: 214 IEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQLKREHDGERVPVITFTKGGGLWL 273
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + +QGNLDP L + + A+LD
Sbjct: 274 EEI-AATGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTILFAPPAAVREQARAVLDSY 332
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 333 GNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|167587924|ref|ZP_02380312.1| uroporphyrinogen decarboxylase [Burkholderia ubonensis Bu]
Length = 364
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 186/337 (55%), Gaps = 16/337 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++S +RR++ + I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLRREHDGERVPVITFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V + A E + +QGNLDP L + + A+L
Sbjct: 260 LWLEEI-AATGVDAVGLDWTVNVGAARERVAGRVALQGNLDPTILFAPPAAIREQARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D G+ P +FNLGHGI+ P++V +LV V +
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHNHS 355
>gi|161869724|ref|YP_001598891.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 053442]
gi|189083012|sp|A9M3L2|DCUP_NEIM0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161595277|gb|ABX72937.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 053442]
Length = 354
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|288942780|ref|YP_003445020.1| uroporphyrinogen decarboxylase [Allochromatium vinosum DSM 180]
gi|288898152|gb|ADC63988.1| uroporphyrinogen decarboxylase [Allochromatium vinosum DSM 180]
Length = 354
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 180/328 (54%), Gaps = 11/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR R K +F+D+C PE E+TLQP+ RY DAAILFSDIL +
Sbjct: 22 PVWMMRQAGRYLPEYRATRAKAGSFMDLCKNPELACEVTLQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGP + PI T L P+ + L Y + ++S +R L
Sbjct: 82 PDAMGLGLYFSEGEGPHFERPIRTAADVDQLPIPDPEGELKY---VMDAVSTIRGALNGR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A+YM+ GG K+ + + + + LL+ ++D YL AQ+
Sbjct: 139 VPLIGFSGSPWTLATYMVEGGGSKNFSKIKAMMFDQPALLHRLLEKVADSVTTYLNAQVA 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
G IFDT G L + ++ + R++ + R+ K I F K G L +
Sbjct: 199 RGAQATMIFDTWGGSLAPANYREFSLAYMQRVVEGLTREAEGRKVPVILFTKNGGQWLGD 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ T +A+G+DW+ L+ A L + +QGN+DP L + + + V +L G
Sbjct: 259 MAK-TGCDALGVDWTTDLADARRLVEDRVALQGNMDPCTLYASPERIREEVARVLASYGH 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G +FNLGHGITP VDP+ ++ V
Sbjct: 318 GSGHVFNLGHGITPDVDPERPAAMISAV 345
>gi|148698629|gb|EDL30576.1| mCG14438 [Mus musculus]
Length = 367
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 186/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+DV YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGIELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPERVGAFVDAV 357
>gi|194207524|ref|XP_001496410.2| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 1 [Equus caballus]
Length = 367
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 180/331 (54%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+ R+ DAAI+FSDILV+
Sbjct: 32 PVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPLHRFPLDAAIIFSDILVV 90
Query: 81 ADALGRNVRFVENEGPRMDPITTQEI---YLLNP-NIDLFLNYLLPIFQSISILRKKLPN 136
ALG V V +GP +E L +P + L Y +FQ+I++ R++L
Sbjct: 91 PQALGMEVTMVPGKGPSFPEPLREECDLERLKHPATVASELGY---VFQAITLTRQRLAG 147
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+
Sbjct: 148 RVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHRLLRILTDALVPYLVGQV 207
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-----KFISFAKGAGY 251
AG +Q+F++HAG LG F +A + + V+ + A I FAK +
Sbjct: 208 AAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKQVKAQLQEAGLAPVPMIIFAKDGHF 267
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD 310
L+ + +GLDW+V A E + K +QGNLDP L + + V +LD
Sbjct: 268 ALEELAK-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYASEEEIGRLVKQMLD 326
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G +I NLGHG+ P +DPK+V V V
Sbjct: 327 DFGPQRYIANLGHGLYPDMDPKHVGAFVDAV 357
>gi|113461676|ref|YP_719745.1| uroporphyrinogen decarboxylase [Haemophilus somnus 129PT]
gi|123327460|sp|Q0I5E2|DCUP_HAES1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112823719|gb|ABI25808.1| uroporphyrinogen decarboxylase [Haemophilus somnus 129PT]
Length = 354
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 192/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ L+ L ++ P+W+MRQAGRYLPEY+ R K +F+ +C + E+TLQP+
Sbjct: 5 KNERYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAKAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ + + N P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPVENKSAVQNLPIPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI+AGV + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 182 LDKLADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGY 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAS-TGCDALGLDWTVNLAEAKARVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V IL G G +FNLGHGI P++ PK +D V
Sbjct: 301 PARIEQEVQQILADFGQGSGHVFNLGHGIHQDVPEISPKVFVDAV 345
>gi|62260530|gb|AAX77913.1| unknown protein [synthetic construct]
Length = 379
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 195/348 (56%), Gaps = 9/348 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L
Sbjct: 24 MLEMRKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVAL 83
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P++RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ +
Sbjct: 84 HPLQRYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGS 143
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + +
Sbjct: 144 LDYVYNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHS 201
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N
Sbjct: 202 LLQRLADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-N 260
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGN 298
+ F KG + + + + +G+DWSV L A G V QGN DP L
Sbjct: 261 IPIVFFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSK 319
Query: 299 QVMIDGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q + + V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 320 QSIRETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIRE 367
>gi|189351936|ref|YP_001947564.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
gi|189335958|dbj|BAG45028.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
Length = 364
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ Y+ + R+++ ++R++ + I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHDGQRVPVITFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V + A E + +QGNLDP L V+ + A+L
Sbjct: 260 LWLEEI-AATGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILFAPPAVVREQARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|78221244|ref|YP_382991.1| uroporphyrinogen decarboxylase [Geobacter metallireducens GS-15]
gi|123742953|sp|Q39ZQ8|DCUP_GEOMG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78192499|gb|ABB30266.1| Uroporphyrinogen decarboxylase HemE [Geobacter metallireducens
GS-15]
Length = 340
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 188/348 (54%), Gaps = 21/348 (6%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLPEY +R K FL++C TPE E+TL
Sbjct: 1 MNNR---FLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSKC-TFLELCKTPELAAEVTL 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVEN---EGPRMDPITTQEIYLLNPNIDLFL 117
QP+ DAAILFSDIL + +G + FV E P + + + NP D+
Sbjct: 57 QPVDILGVDAAILFSDILTPVEPMGLKLDFVPGPVFETPVRTMADVERLRIPNPEEDVPY 116
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ +I ILRK+L + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 117 -----VLDTIKILRKELAGRVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D ++ + EYL AQI AG IQIFDT G L ++E + ++I+ + R+
Sbjct: 172 AALMDKVTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKFVLPYTRKLINGLNRQ- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRL 294
N I F KGAG ML+ ++ + +GLDW V L A ++ GP VQGNLDP L
Sbjct: 231 -NTPVIHFVKGAGTMLETVQK-AGGDVMGLDWHVNLGKARDVL--GPNMAVQGNLDPTVL 286
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+V+ V +LD P IFNLGHGI P V P+N + +V+ V
Sbjct: 287 YAPKEVIEVEVKRVLDENAGRPGHIFNLGHGILPTVPPENAIHMVECV 334
>gi|161523292|ref|YP_001578304.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
gi|160340721|gb|ABX13807.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
Length = 392
Score = 219 bits (558), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 51 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 110
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 111 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 167
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 168 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 227
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ Y+ + R+++ ++R++ + I+F KG G
Sbjct: 228 NAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHDGQRVPVITFTKGGG 287
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V + A E + +QGNLDP L V+ + A+L
Sbjct: 288 LWLEEI-AATGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILFAPPAVVREQARAVL 346
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 347 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 379
>gi|261401614|ref|ZP_05987739.1| uroporphyrinogen decarboxylase [Neisseria lactamica ATCC 23970]
gi|269208319|gb|EEZ74774.1| uroporphyrinogen decarboxylase [Neisseria lactamica ATCC 23970]
Length = 354
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NVQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL G G +FNLGHGI DPK+ LV TV
Sbjct: 303 IRTEAARILADYGHGSGHVFNLGHGINQHADPKHAKILVDTVHE 346
>gi|40889568|pdb|1R3S|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
Complex With Coproporphyrinogen-I
gi|40889569|pdb|1R3T|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
Complex With Coproporphyrinogen-Iii
Length = 367
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSGILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|225075723|ref|ZP_03718922.1| hypothetical protein NEIFLAOT_00739 [Neisseria flavescens
NRL30031/H210]
gi|224952994|gb|EEG34203.1| hypothetical protein NEIFLAOT_00739 [Neisseria flavescens
NRL30031/H210]
Length = 353
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFCTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGKARRRVGEQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|256818948|ref|YP_003140227.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea DSM 7271]
gi|256580531|gb|ACU91666.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea DSM 7271]
Length = 341
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 189/342 (55%), Gaps = 12/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L VL G V PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 8 LRVLNGEVTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCQTPELAAEITVQPVDIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V + GP + PI T + + PNI+ L Y++ +
Sbjct: 67 DAAILFSDILVVPQAMNIEVEMKKGVGPWLPKPIRTAKDVEQAIVPNIEERLGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + ++ L N + LIGF G+PWT+ Y + G +D + + + LL ++
Sbjct: 124 AVKLTKQMLNNRVPLIGFAGSPWTIFCYAVEGSGSRDFSTAKELCFTQPSVAHSLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P K I F
Sbjct: 184 DTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEALA---PFTKVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
AKG Y L +++ A+G+DW+ A EL + V QGN DP RL+ +
Sbjct: 241 AKGCWYALPEMAT-SNAAALGVDWTCAPEIARELTRGKKVLQGNFDPSRLLAPPAEIKQK 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V ++D G +I NLGHGI P V +N + V+ V+S ++
Sbjct: 300 VKEMIDAFGKDHYIANLGHGILPNVPVENAIAFVEAVKSYRL 341
>gi|332291692|ref|YP_004430301.1| uroporphyrinogen decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169778|gb|AEE19033.1| uroporphyrinogen decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
Length = 342
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 201/349 (57%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+
Sbjct: 1 MSIKNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITV 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFL 117
QPIRRY DAAILFSDILVI A+ +V N GP + +PI + + ++ P+ID L
Sbjct: 60 QPIRRYGMDAAILFSDILVIPQAMNIDVEMKPNVGPWLPNPIRSAKDVEQVIVPDIDETL 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y++ +I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A
Sbjct: 120 GYVM---DAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPLAA 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 177 HALLQKITDTTIAYLKKKVEAGVNAVQVFDSWGGMLSPVDYQEFSWQYIKQIIDALKDEA 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
P I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 237 P---VIAFGKGCWFALDKMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFS 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 293 PPREIKRMVHEMINEFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|212637431|ref|YP_002313956.1| uroporphyrinogen decarboxylase [Shewanella piezotolerans WP3]
gi|226723877|sp|B8CTX5|DCUP_SHEPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|212558915|gb|ACJ31369.1| Uroporphyrinogen decarboxylase HemE [Shewanella piezotolerans WP3]
Length = 354
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 190/346 (54%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ + L
Sbjct: 124 --VMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 242 QVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGNKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V+P++ + +V
Sbjct: 301 PERIHQEVEQILSSYGEGTGHVFNLGHGIHQHVNPEHAGSFINSVH 346
>gi|195431882|ref|XP_002063957.1| GK15945 [Drosophila willistoni]
gi|194160042|gb|EDW74943.1| GK15945 [Drosophila willistoni]
Length = 356
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/346 (37%), Positives = 195/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RKK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKKH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L+
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIRTPEDLKRLTP--DGALSRLM 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 128 YVGEAITMMRHKLDGRVPLIGFTGAPWTLLGYMIEGGGSKTMSKAKAWLNEYPEDTKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++QIF++ A L + EF +A + RI + + ++
Sbjct: 188 NLLTDAIVDYLEMQVQAGAQMLQIFESSAEHLSKEEFLEWAVPYLRRIRNELVDRLTKKV 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V P+ E+ +QGNLDP +
Sbjct: 248 IPLVPLTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARKEVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPEELRTLTTEMVHKFGKSRYIANLGHGITPQTPINSMEVLVEAV 352
>gi|325919810|ref|ZP_08181803.1| uroporphyrinogen decarboxylase [Xanthomonas gardneri ATCC 19865]
gi|325549724|gb|EGD20585.1| uroporphyrinogen decarboxylase [Xanthomonas gardneri ATCC 19865]
Length = 354
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 194/354 (54%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M PE E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPEIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETDLRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LSTVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ F KG G + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVSEL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P++V LV+ V++
Sbjct: 297 GSPEAIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQT 350
>gi|18158960|pdb|1JPK|A Chain A, Gly156asp Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF APWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFADAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 274
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 378
>gi|317010827|gb|ADU84574.1| uroporphyrinogen decarboxylase [Helicobacter pylori SouthAfrica7]
Length = 339
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCQNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQARQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELMEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++YP+ I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|254672848|emb|CBA07056.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha275]
Length = 354
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEAARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|193214637|ref|YP_001995836.1| uroporphyrinogen decarboxylase [Chloroherpeton thalassium ATCC
35110]
gi|238058017|sp|B3QXB5|DCUP_CHLT3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193088114|gb|ACF13389.1| uroporphyrinogen decarboxylase [Chloroherpeton thalassium ATCC
35110]
Length = 353
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 196/332 (59%), Gaps = 13/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR++R K +F+ +C TPE E+T+QPI DAAI+FSDILVI
Sbjct: 20 PIWVMRQAGRYLPEYREVRSK-ADFVTLCKTPELAAEVTVQPIDIIGLDAAIIFSDILVI 78
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G + +E++GPR+ +PI + L+ P++ L Y + +I + +K+L +
Sbjct: 79 PEAMGMGLEIIESKGPRLYEPIRSAADIDRLVVPDVADKLGY---VADAIRLTKKQLDDR 135
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GA WT+ +Y + GG K++ + Y + + LL +S V ++L+ QI
Sbjct: 136 VPLIGFAGAAWTLFTYAVEGGGSKNYRFAKELIYNHPDQAHKLLGKISQVITDFLLLQIE 195
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
GV+ +QIFD+ A L E +++ +A + + + AV+ K+P+ I FAK A +L +
Sbjct: 196 VGVNAVQIFDSWASALSEDDYKTFALPYIKQSVEAVKSKHPDIPVIVFAKDANTILTDLA 255
Query: 258 RLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG--- 313
T +A+GL W++ ++ A EL +QGNLDP L + + + IL G
Sbjct: 256 D-TGCDALGLSWNIDIARARQELNDRVALQGNLDPTVLYASPERIREEAGKILAKFGQHT 314
Query: 314 -SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHGI P V+P+++ LV ++ E
Sbjct: 315 EKSGHVFNLGHGILPDVNPEHLKALVDFIKEE 346
>gi|256425454|ref|YP_003126107.1| uroporphyrinogen decarboxylase [Chitinophaga pinensis DSM 2588]
gi|256040362|gb|ACU63906.1| uroporphyrinogen decarboxylase [Chitinophaga pinensis DSM 2588]
Length = 341
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 189/340 (55%), Gaps = 12/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G P+W+MRQAGRYLP+Y ++R+K+ +F + C PE E+T+ P+ +
Sbjct: 9 LLRALRGETTERVPVWMMRQAGRYLPDYIKLREKY-SFFERCMNPELATEITVMPVHQVG 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLFLNYLLPIF 124
DAAI+FSDILV+ A+G V+ +E GP + DP+ L P++ LNY +F
Sbjct: 68 VDAAIIFSDILVVPQAMGMEVQLIEKIGPVLPDPVKGAADLQKLCVPDVKDTLNY---VF 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++++ +K L + LIGF GAPWT+ YM+ G K + F YQ + LL +
Sbjct: 125 EALALTKKTLDGAVPLIGFAGAPWTLLCYMVQGKGSKTFDAAKAFCYQQPEVAHQLLQMI 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + YL Q+ AG D +Q+FD+ G L +FEN++ + + +I++A++ P
Sbjct: 185 TDTTIAYLKEQVKAGADCLQLFDSWGGLLSPQDFENFSLQYMRQIVAALKDVCP---VTV 241
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
FAKGA + L+ T +N +G+DW++ + A + +QGN DP +L+ +
Sbjct: 242 FAKGAWFALEEMAA-TGANCLGVDWAIQPARARQFAGNNVTLQGNFDPAKLLAPIPEIKK 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L G +I NLGHGI P V + + TV+
Sbjct: 301 SVKEMLTGFGKHRYIANLGHGILPNVPVDHARAFIDTVKE 340
>gi|261365622|ref|ZP_05978505.1| uroporphyrinogen decarboxylase [Neisseria mucosa ATCC 25996]
gi|288565858|gb|EFC87418.1| uroporphyrinogen decarboxylase [Neisseria mucosa ATCC 25996]
Length = 353
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFEHALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L+N + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLENMAEI-GADALGLDWTCNIGEARHRVGNQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV V
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDAVHE 346
>gi|197116416|ref|YP_002136843.1| uroporphyrinogen decarboxylase [Geobacter bemidjiensis Bem]
gi|226696376|sp|B5E7R1|DCUP_GEOBB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197085776|gb|ACH37047.1| uroporphyrinogen decarboxylase [Geobacter bemidjiensis Bem]
Length = 339
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 191/345 (55%), Gaps = 16/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+
Sbjct: 1 MNTR---FLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELATEVTV 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ DAAILFSDIL + +G + F GP PI T ++ L P ++ +
Sbjct: 57 QPVDILGVDAAILFSDILTPIEPMGMELDF--TPGPVFAKPIRTMADVEALKIPKMETDV 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y + +
Sbjct: 115 PYVL---DAVKLLRKELATKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D ++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R
Sbjct: 172 AALMDKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F KGAG ML+ ++ + +GLDW V L A ++ + VQGNLDP L
Sbjct: 231 -NIPVIHFVKGAGTMLEIVKQ-AGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAP 288
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
N+++ V +LD P IFNLGHGI P V P+ + +V V
Sbjct: 289 NEIIEREVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCV 333
>gi|319940674|ref|ZP_08015016.1| uroporphyrinogen decarboxylase [Sutterella wadsworthensis 3_1_45B]
gi|319805825|gb|EFW02592.1| uroporphyrinogen decarboxylase [Sutterella wadsworthensis 3_1_45B]
Length = 355
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 190/350 (54%), Gaps = 13/350 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M L L + P+WLMRQAGRYLPEY R K +F+ + P+Y E+TL
Sbjct: 1 MTLHNDTFLRALMREHTDFTPVWLMRQAGRYLPEYCATRSKAGSFMGLAKNPDYATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFL 117
QPI RY DAAILFSDIL + DA+G + FV+ EGP P+ + L P+I+ L
Sbjct: 61 QPIDRYGIDAAILFSDILTVPDAMGLGLSFVQGEGPVFAHPVQDEAAVKALAVPDIEDKL 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+ +SI R+ L N + LIGF G+P+T+A YM+ G +D + ++ F
Sbjct: 121 GYVTAAVRSI---RRALDNRVPLIGFSGSPFTLACYMVEGRGSRDFRTAKTMMFRRPDLF 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+LD +D A+YL AQI AG +QIFDT G L + +F+ ++ + +++S + R+
Sbjct: 178 ERILDINADAVADYLNAQIAAGAQAVQIFDTWGGMLADGDFQRFSLAATKKVVSRLTREA 237
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
AK I F KG G ++ +A+GLDW+ L+ A + ++ +QGN+DP+ L
Sbjct: 238 DGAKVPVIVFTKGGGEWIEEI-AACGCDAVGLDWTTNLARARRVTEDRVALQGNMDPLAL 296
Query: 295 VVGNQVMIDGVNAILDV---LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V ++D +G G +FNLGHGI +NV LV V
Sbjct: 297 FGDEKTIRSEVRRVIDAFGPVGMGGHVFNLGHGINQFTPIENVQILVDEV 346
>gi|150261558|pdb|2Q71|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Enzyme
In Complex With Coproporphyrinogen-Iii
gi|151567946|pdb|2Q6Z|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Apo-
Enzyme
Length = 356
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 5 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 64 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ G Q + + YQ +A + LL
Sbjct: 124 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVERGGSSTMAQAKRWLYQRPQASHQLLR 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 184 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 243
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 244 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 302
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 303 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 347
>gi|78776833|ref|YP_393148.1| uroporphyrinogen decarboxylase [Sulfurimonas denitrificans DSM
1251]
gi|123550610|sp|Q30SW8|DCUP_SULDN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78497373|gb|ABB43913.1| Uroporphyrinogen decarboxylase HemE [Sulfurimonas denitrificans DSM
1251]
Length = 343
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 185/325 (56%), Gaps = 7/325 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R + NFL++C+ P+ E+TLQP+ DAAILFSDILV+
Sbjct: 18 PVWMMRQAGRYLPEYMRVRAEAGNFLNLCHDPKKACEVTLQPVDIVGVDAAILFSDILVV 77
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G +++FV EGP+ DPI + D + L ++ +I +++++L
Sbjct: 78 PLEMGMDLKFVTGEGPKFDDPIKNEADLDRLFGGDEAASKLTYVYDTIKLIKEQLAEDKA 137
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAPWT+A+YMI G K + + Y N + + +L +++V Y+ QI AG
Sbjct: 138 LIGFTGAPWTLATYMIEGEGTKTYNICKKMMYSNPKLLHKILSKVTEVVKFYMEKQIEAG 197
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRR 258
+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F KG ++ K Y
Sbjct: 198 IDVVQIFDSWAAAIEPSKYDEFSWKYMVEIADYLKAKYPHIPIIMFPKGIPAFLDKVYGN 257
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
G+DWS P+ A E L + +QGN++P RL + + V +I ++G
Sbjct: 258 F---EVFGVDWSTPMDLAKEKLGERYVLQGNMEPCRLYSKEET-TESVESIQKIMGGKRH 313
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N +K
Sbjct: 314 IFNLGHGILPDVPVENAKHFIKECH 338
>gi|86131005|ref|ZP_01049604.1| uroporphyrinogen decarboxylase [Dokdonia donghaensis MED134]
gi|85818416|gb|EAQ39576.1| uroporphyrinogen decarboxylase [Dokdonia donghaensis MED134]
Length = 342
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 200/349 (57%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+
Sbjct: 1 MSIKNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITV 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFL 117
QPIRRY DAAILFSDILVI A+ +V N GP + +PI + + ++ P+ID L
Sbjct: 60 QPIRRYGMDAAILFSDILVIPQAMNIDVEMKPNVGPWLPNPIRSAKDVEQVIVPDIDETL 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y++ +I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A
Sbjct: 120 GYVM---DAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPLAA 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 177 HALLQKITDTTIAYLKKKVEAGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKDEA 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
P I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 237 P---VIAFGKGCWFALDKMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFS 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 293 PPSEIKRMVHEMINEFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|325137816|gb|EGC60391.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ES14902]
Length = 354
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEAARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|296157530|ref|ZP_06840365.1| uroporphyrinogen decarboxylase [Burkholderia sp. Ch1-1]
gi|295892302|gb|EFG72085.1| uroporphyrinogen decarboxylase [Burkholderia sp. Ch1-1]
Length = 366
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 184/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + +P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNATRGRAGSFLGLAKSPAFATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + FV EGP+ P+ T++ L P+ID L Y+ + I ++ +
Sbjct: 83 PDAMGLGLEFVTGEGPKFARPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y + +LD + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILDVNARAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + +++S ++R + K ++F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGVYQRFSLHYIQQVVSQLKRDHDGEKVPVVTFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
T +A+GLDW+V LS A E + + +QGN+DP L + A+LD
Sbjct: 263 DEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSVLFAPPAAIRMEARAVLDSF 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|170718716|ref|YP_001783906.1| uroporphyrinogen decarboxylase [Haemophilus somnus 2336]
gi|189083009|sp|B0US07|DCUP_HAES2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|168826845|gb|ACA32216.1| uroporphyrinogen decarboxylase [Haemophilus somnus 2336]
Length = 354
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 192/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R K +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAKAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIDNKSAVQNLPIPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI+AGV + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 182 LDKLADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGY 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAS-TGCDALGLDWTVNLAEAKARVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V IL G G +FNLGHGI P++ PK +D V
Sbjct: 301 PARIEQEVQQILADFGQGSGHVFNLGHGIHQDVPEISPKVFVDAV 345
>gi|90407134|ref|ZP_01215322.1| uroporphyrinogen decarboxylase [Psychromonas sp. CNPT3]
gi|90311710|gb|EAS39807.1| uroporphyrinogen decarboxylase [Psychromonas sp. CNPT3]
Length = 355
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 194/347 (55%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEY+ +R + +F+ +C + E+T+QP+
Sbjct: 5 KNDRYIRALLKQEVDKTPVWMMRQAGRYLPEYKALRAQAGDFMSLCRNADLACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F EGP+ + PI+ ++ L+ P+ + L Y
Sbjct: 65 RRFDLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISCKKDVDNLIMPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ + + L
Sbjct: 124 --VMNAVRRIRQELDGSVPLIGFSGSPWTLATYMVEGGTSKAFTKIKKMAFADPAILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D +YL AQI AGV + IFDT G L ++E ++ + + +I+ + R Y
Sbjct: 182 LDKLADSVIQYLNAQIEAGVQSVMIFDTWGGVLSPRDYELFSLQYMHKIVDGLHRTYAGQ 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K G L+ T + IGLDW++ ++ A + + +QGN+DP L
Sbjct: 242 KIPVTLFTKNGGQWLEKIAA-TGCDCIGLDWTIDIATAKARVGDKVALQGNMDPSILYAS 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V+ IL G+G IFNLGHGI V P+N V V
Sbjct: 301 GSRIRQEVDTILKGYGNGVGHIFNLGHGIHQDVPPENAKIFVDAVHE 347
>gi|325525069|gb|EGD02968.1| uroporphyrinogen decarboxylase [Burkholderia sp. TJI49]
Length = 364
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 185/330 (56%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+ L P+I+ L Y+ + I ++ +
Sbjct: 83 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLGYVTGAVREIRRALTDGQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + AY + +L+ + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILEVNAQAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ Y+ + R+++ ++R++ + I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHDGERVPVITFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V + A E + +QGNLDP L V+ + A+LD
Sbjct: 263 EEIAS-TGVDAVGLDWTVNVGAARERVAGRVALQGNLDPTILFAPPAVVREQARAVLDSY 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|208434525|ref|YP_002266191.1| uroporphyrinogen decarboxylase [Helicobacter pylori G27]
gi|238058039|sp|B5Z6X6|DCUP_HELPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|208432454|gb|ACI27325.1| uroporphyrinogen decarboxylase [Helicobacter pylori G27]
Length = 339
Score = 218 bits (556), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 189/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEILKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++YP+ I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVETILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|30248462|ref|NP_840532.1| uroporphyrinogen decarboxylase [Nitrosomonas europaea ATCC 19718]
gi|38257434|sp|Q82X50|DCUP_NITEU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|30138348|emb|CAD84356.1| Uroporphyrinogen decarboxylase (URO-D) [Nitrosomonas europaea ATCC
19718]
Length = 355
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 188/333 (56%), Gaps = 11/333 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY Q R + +FL +C P++ E+TLQP+ R++ DAAILFSDIL I
Sbjct: 22 PVWMMRQAGRYLPEYNQTRARAGSFLSLCKNPDFATEVTLQPLARFSLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EI-YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F + EGPR + P+ + EI L+ P+ D L Y + ++ +R L N
Sbjct: 82 PDAMGLGLYFADGEGPRFERPLREEREIRSLIVPDPDTHLRY---VTDAVRQIRTALNNR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ G + Q + Y + +L + YL AQI
Sbjct: 139 VPLIGFSGSPFTLACYMVEGAGSSEFRQIKTMLYARPDLLHHILGVTAQAVTAYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + IFD+ G L ++ ++ R + +I+ ++R++ + I F KG G L++
Sbjct: 199 AGAQAVMIFDSWGGALSHAAYQEFSLRYMNQILDGLKREHNGDRIPNILFTKGGGLWLES 258
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ +AIGLDW++ + A Q + +QGNLDP L +V+ IL G
Sbjct: 259 I-MASGCDAIGLDWTIDIGEARRRTQDKVALQGNLDPAVLFSSPEVIAAEAGKILASYGH 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
G +FNLGHGI+ P+N L L++ V ++ +
Sbjct: 318 GHGHVFNLGHGISQFTPPENALALIEAVHAQSV 350
>gi|91785729|ref|YP_560935.1| uroporphyrinogen decarboxylase [Burkholderia xenovorans LB400]
gi|123167896|sp|Q13SQ6|DCUP_BURXL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91689683|gb|ABE32883.1| Uroporphyrinogen decarboxylase HemE [Burkholderia xenovorans LB400]
Length = 366
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 183/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + FV EGP+ P+ T++ L P+ID L Y+ + I ++ +
Sbjct: 83 PDAMGLGLEFVTGEGPKFARPVRTEDDVARLAVPDIDATLRYVTDAVREIRTALTDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y + +LD + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILDVNARAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + +++S ++R + K I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGVYQRFSLHYIQQVVSQLKRDHDGEKVPVITFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
T +A+GLDW+V LS A E + + +QGN+DP L + A+LD
Sbjct: 263 DEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSVLFAPPAAIRMEARAVLDSF 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|12804699|gb|AAH01778.1| Uroporphyrinogen decarboxylase [Homo sapiens]
gi|30582313|gb|AAP35383.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|60655569|gb|AAX32348.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|60655571|gb|AAX32349.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|123979570|gb|ABM81614.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|123994389|gb|ABM84796.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 367
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +Q NLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQVNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|291277044|ref|YP_003516816.1| uroporphyrinogen decarboxylase [Helicobacter mustelae 12198]
gi|290964238|emb|CBG40087.1| uroporphyrinogen decarboxylase [Helicobacter mustelae 12198]
Length = 340
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 181/328 (55%), Gaps = 10/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EYR R K +FLD+C E+TLQP+ N DAAILFSDIL+I
Sbjct: 16 PIWMMRQAGRYLEEYRATRAKAGSFLDLCQDVTLATEVTLQPVEILNVDAAILFSDILLI 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G + F+ EGPR + D F L+Y ++ +IS +R +LP
Sbjct: 76 PLEMGLPLEFIAGEGPRFQKSIESYSDVCALKKDAFERLDY---VYDTISSVRARLPQDK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+A+YMI G K + +++ Y N + ++LL ++D YL QI A
Sbjct: 133 ALIGFCGAPWTLATYMIEGEGSKTYTKSKKMLYANPQTMHYLLKQITDELKGYLTKQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + + IFD+ A L + + ++ + I V+ +P+ I F KG LK+
Sbjct: 193 GANAVMIFDSWANALAKDAYFEFSWGYMKDIAKHVKMHHPDIPVILFPKGVAGYLKHID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
D + G+DWS PL A L K+ +QGNL+P L M GV+ IL V+G P
Sbjct: 252 -GDFDVFGVDWSTPLELAKTLLGKKYVLQGNLEPCCL-YHEDAMEMGVDEILAVMGKKPG 309
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N + LV+ + +
Sbjct: 310 HIFNLGHGMLPDLPRENAIKLVELIHQK 337
>gi|30584783|gb|AAP36644.1| Homo sapiens uroporphyrinogen decarboxylase [synthetic construct]
gi|61372969|gb|AAX43947.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 368
Score = 218 bits (556), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +Q NLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQVNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|315635143|ref|ZP_07890421.1| uroporphyrinogen decarboxylase [Aggregatibacter segnis ATCC 33393]
gi|315476105|gb|EFU66859.1| uroporphyrinogen decarboxylase [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 189/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP+ + + + + N P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPIPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPHLLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L E+ ++ R + +I+ + R++
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHREYPEFSLRYMHKIVDGLIREHEGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAKARHRIGHKVALQGNMDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ D V +IL G G +FNLGHGI P+ PK ++D V
Sbjct: 301 AGRIEDEVRSILAAFGEGSGHVFNLGHGIHQDVPEESPKVLVDAV 345
>gi|225023206|ref|ZP_03712398.1| hypothetical protein EIKCOROL_00058 [Eikenella corrodens ATCC
23834]
gi|224944030|gb|EEG25239.1| hypothetical protein EIKCOROL_00058 [Eikenella corrodens ATCC
23834]
Length = 351
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 187/339 (55%), Gaps = 10/339 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L ++ P+WLMRQAGRYLPEYR +R + FLD+C E E+T+QPI R+
Sbjct: 10 LRTLAKQPVSHTPVWLMRQAGRYLPEYRAVRARAGGFLDLCKNTELATEVTVQPIDRFGL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL + DA+G + F E EGP+ P+ + +I L L Y +F +
Sbjct: 70 DAAILFSDILTVPDAMGLGLYFAEGEGPKFARPLQNEADIAALQVPDMAKLRY---VFDA 126
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S +R+ L + LIGF G+P+T+A YM+ GG K+ Q + Y+ + +L+ +
Sbjct: 127 VSSIRRALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRQIKALLYRRPELLHHILNITAQ 186
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FIS 244
YL QI AG +QIFDT G L + F ++ + +IIS + R++ + I
Sbjct: 187 SVTAYLNEQIAAGAQAVQIFDTWGGLLSDAAFPEFSLAYMRQIISDLTREHEGRRVPVIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KG G L+ + ++A+GLDW+V L A + + + +QGN DP L + +
Sbjct: 247 FTKGGGQWLELMAE-SGADALGLDWTVNLGQARQRVGGQVALQGNFDPAALFGTPESVRA 305
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
V IL G G +FNLGHGI+ DP+NV LV V
Sbjct: 306 EVRRILHSYGEGSGHVFNLGHGISQHTDPENVKALVDAV 344
>gi|307637293|gb|ADN79743.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 908]
gi|325995883|gb|ADZ51288.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 2018]
gi|325997478|gb|ADZ49686.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 2017]
Length = 339
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCQNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++YP+ I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|304387910|ref|ZP_07370083.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ATCC 13091]
gi|304338007|gb|EFM04144.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ATCC 13091]
Length = 354
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ G K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVESGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|254368525|ref|ZP_04984542.1| hypothetical protein FTAG_01374 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121419|gb|EDO65620.1| hypothetical protein FTAG_01374 [Francisella tularensis subsp.
holarctica FSC022]
Length = 344
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A G V QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKHARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|52424238|ref|YP_087375.1| HemE protein [Mannheimia succiniciproducens MBEL55E]
gi|81691508|sp|Q65W70|DCUP_MANSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|52306290|gb|AAU36790.1| HemE protein [Mannheimia succiniciproducens MBEL55E]
Length = 354
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 192/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP+ D PI T+ L P+ + L Y
Sbjct: 65 RRYELDAAILFSDILTIPDAMGLGLTFGAGEGPKFDRPIETKSAVENLPIPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + L
Sbjct: 124 --VMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSTKAFTKIKKMMYAEPKLLHKL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D YL AQI AG + IFDT G LG E+ +++ + + +I++ + R+
Sbjct: 182 LDKVADSVVLYLNAQIKAGAQAVMIFDTWGGVLGHREYLDFSLQYMHKIVNGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L T +AIGLDW+V L+ A ++ + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLDAIAD-TGCDAIGLDWTVNLAQAKAQVGHKVALQGNMDPSVLYAA 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ + V +IL G G +FNLGHGI P PK +D +
Sbjct: 301 PERIEQEVRSILADFGEGSGHVFNLGHGIHQDVPVESPKVFVDAI 345
>gi|114330618|ref|YP_746840.1| uroporphyrinogen decarboxylase [Nitrosomonas eutropha C91]
gi|122314388|sp|Q0AIF1|DCUP_NITEC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114307632|gb|ABI58875.1| uroporphyrinogen decarboxylase [Nitrosomonas eutropha C91]
Length = 356
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 188/333 (56%), Gaps = 11/333 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY Q R + +FL +C P E+TLQP+ R+ DAAILFSDIL I
Sbjct: 22 PVWMMRQAGRYLPEYNQTRARAGDFLALCKNPALATEVTLQPLDRFPLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIY-LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGPR + P+ + EI+ L+ P+ L Y + +++ +RK L N
Sbjct: 82 PDAMGLGLYFSTGEGPRFERPLREEREIHSLIVPDPGTHLRY---VMDAVTEIRKALNNR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ G D+ Q + Y + +L+ + YL AQI
Sbjct: 139 VPLIGFSGSPFTLACYMVEGASSNDYRQIKTMLYTRPDLLHHILEVTAQAVIVYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + IFD+ G L ++ ++ R + +I+ ++R++ + + I F KG G L++
Sbjct: 199 AGAQAVMIFDSWGGALSHAAYQEFSLRYMTQIMEGLKREHDSERIPNILFTKGGGLWLES 258
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ +AIGLDW++ + A Q + +QGNLDP L + + V IL G
Sbjct: 259 I-MASGCDAIGLDWTIDIGEARRRTQDKVALQGNLDPAVLFSSPEAIAAEVGKILASYGH 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
G +FNLGHGI+ P+N LV+TV + +
Sbjct: 318 GHGHVFNLGHGISQFTPPENAKTLVETVHMQSV 350
>gi|222823541|ref|YP_002575115.1| uroporphyrinogen decarboxylase [Campylobacter lari RM2100]
gi|254767689|sp|B9KFM9|DCUP_CAMLR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|222538763|gb|ACM63864.1| uroporphyrinogen decarboxylase [Campylobacter lari RM2100]
Length = 340
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 190/326 (58%), Gaps = 6/326 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R +FL +C + E+TLQP+ DAAI+FSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMEVRASAGDFLSLCKDYKKASEVTLQPVDILGVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G +++F + EGP +PI T+E L +++ + L ++ ++++ R+KL +
Sbjct: 76 PLEMGMDLKFEKGEGPVFSNPIKTKED-LERLDVEKSIKNLSYVYDALALTREKLAHDKA 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCG+PWT+A+YMI GG K++ + + YQN + +L L+ Y+ QI AG
Sbjct: 135 LIGFCGSPWTIATYMIEGGGSKNYAKCKKLVYQNPEFLHQILSKLTLALKHYIQEQIKAG 194
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+ +QIFD+ A L E F ++ + + I ++ KYP+ I F KG L N
Sbjct: 195 ANAVQIFDSWASALEEEMFFEFSFKYMLEIADFIKEKYPHIPVILFPKGVSGFLDNIN-- 252
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+ + G+DWS PL A E L + +QGN++P RL + + GV+ IL+++ I
Sbjct: 253 GNFDVFGVDWSTPLELAKEKLGAKYTLQGNMEPCRLYDKKAIEV-GVDKILNIMQDSAHI 311
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSE 344
FNLGHGI P + +N +K V+ +
Sbjct: 312 FNLGHGILPDIPVENAKYFIKLVQEK 337
>gi|197106995|ref|YP_002132372.1| uroporphyrinogen decarboxylase [Phenylobacterium zucineum HLK1]
gi|254767701|sp|B4RD11|DCUP_PHEZH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|196480415|gb|ACG79943.1| uroporphyrinogen decarboxylase [Phenylobacterium zucineum HLK1]
Length = 345
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ K+L L G + PPIW MRQAGR LPEYR++R + K+F+ C PE E TL
Sbjct: 1 MSTPPPKLLRALAGETLERPPIWFMRQAGRSLPEYRELRSRAKDFIAFCLDPEMAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RR+ D AI+F+DIL+I ALG++V F EGP++ + I L ++ L
Sbjct: 61 QPMRRFPMDGAIVFADILLIPLALGQDVWFEAGEGPKLGELPP--IEALRDQVEASTGRL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNW 179
+ ++++ +R +L LIGF GAPWTVA+YM+ G ++ + +A+ + +
Sbjct: 119 SAVGETLARVRAELEPDRALIGFAGAPWTVATYMLERKGSEREAARAYAYAHPDE--LDA 176
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L D +A YL+ Q AG +++F++ A L E FE R I+ VR
Sbjct: 177 LLDVLVDATARYLVMQAKAGAQALKLFESWAESLSEDVFERIVVRPHAAIVEKVRAAGVT 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F +GAG ++ Y I LD + LQ +G +QG LD + L G
Sbjct: 237 VPIIGFPRGAGAQVETYAEGVPVEGIALDVQATAALGRRLQAQGRCIQGALDNLLLREGG 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V+ +L G GP+IFNLGHG+ P +N+ +V V + +
Sbjct: 297 PALDARVDQLLAQWGDGPWIFNLGHGVLPDTPIENIARVVSRVTGKPV 344
>gi|57168141|ref|ZP_00367280.1| uroporphyrinogen decarboxylase [Campylobacter coli RM2228]
gi|57020515|gb|EAL57184.1| uroporphyrinogen decarboxylase [Campylobacter coli RM2228]
Length = 340
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R++ +FL +C + E++LQP+ DAAI+FSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMKVRQEAGDFLSLCKDYKRASEVSLQPVDILGVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+G N+RF + EGP I+T E L + N LNY ++ ++ + R+KLP
Sbjct: 76 PLEMGMNLRFEKGEGPVFQTSISTLEDLNKLDDQNAYKKLNY---VYDALKLTREKLPLD 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V YL QI
Sbjct: 133 KALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHEILNKLTQVLKSYLEEQIK 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
AG + +QIFD+ A L +F +++ + + I ++ KYP+ I F KG +GY+ K
Sbjct: 193 AGANAVQIFDSWASALECDKFFDFSFKYMLEISDFIKNKYPHIPVILFPKGISGYLDK-- 250
Query: 257 RRLTDSN--AIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
D N G+DWS PL A + L + +QGN++P RL + + GV IL+++
Sbjct: 251 ---IDGNFDVFGVDWSTPLDLARDKLSHQYTLQGNMEPCRL-YDKKAIKQGVENILEIMQ 306
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IFNLGHGI P + +N ++ V+
Sbjct: 307 NKAHIFNLGHGILPDIPVENAKYFIQLVQE 336
>gi|319638045|ref|ZP_07992809.1| uroporphyrinogen decarboxylase [Neisseria mucosa C102]
gi|317400690|gb|EFV81347.1| uroporphyrinogen decarboxylase [Neisseria mucosa C102]
Length = 353
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVKYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 DRFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|304311966|ref|YP_003811564.1| Uroporphyrinogen decarboxylase [gamma proteobacterium HdN1]
gi|301797699|emb|CBL45921.1| Uroporphyrinogen decarboxylase [gamma proteobacterium HdN1]
Length = 351
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/351 (36%), Positives = 194/351 (55%), Gaps = 16/351 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L LQ ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRFLRALQRQPVDMTPVWMMRQAGRYLPEYRATRARAGDFMALCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+ R+ DAAILFSDIL I DA+G + F EGP+ P+ TQ L PN+
Sbjct: 61 LQPLDRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFHKPVRTQAQVEALPIPNVAAD 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L+Y++ ++I R L + LIGF G+PWT+A+YM+ GG +D + +
Sbjct: 121 LDYVMAAVRTI---RSALGGRVPLIGFSGSPWTLATYMVEGGSSRDFATIKRMMFTQPEV 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL QI +G +QIFDT G L ++ ++ + +I++ + R+
Sbjct: 178 LHQLLDKLATTVIAYLNEQIRSGAQAVQIFDTWGGVLNTPCYQAFSLDYMQKIVAGLIRE 237
Query: 237 YPNAKF--ISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
+ + I F K G L+ R+ D+ +A+GLDW++ + A + +QGN+DP
Sbjct: 238 HEGREVPCILFTKNGGQWLE---RIADTGCSAVGLDWTLDIGVARSRVGNRVAIQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V ILD G +FNLGHGITP+VDP+N ++ V
Sbjct: 295 SILYGTHNAIRAEVKRILDDFGPHNGHVFNLGHGITPEVDPENARVFIEAV 345
>gi|1498643|gb|AAB18294.1| uroporphyrinogen decarboxylase [Mus musculus]
Length = 367
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 185/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGIEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+DV YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRSIANLGHGLYPDMDPERVGAFVDAV 357
>gi|317404548|gb|EFV84955.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans C54]
Length = 357
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 185/330 (56%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYR+ R + +F+ + P+Y E+TLQP+ R++ DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYRETRARAGSFMGLAQNPDYASEVTLQPLERFDLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F E EGPR P+ T++ L P++D L Y +F ++ +R+ L
Sbjct: 84 PHAMGLGLDFAEGEGPRFARPVRTEDDVARLAVPDMDK-LRY---VFDAVGTIRRDLDGK 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L+ ++ + +YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMVEGQGSDDYRLIKTMLYSRPDLLHRILEINAEATLQYLNAQIA 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ ++++ + R++ + I F KG G L++
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLTREHEGRRVPAIVFTKGGGQWLED 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+A+GLDW+V L+ A + QGNLDPM L G + +LD
Sbjct: 260 I-AACGCDAVGLDWTVDLAAARRRTGDCVAFQGNLDPMALFGGADAIRAEARRVLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+G G +FNLGHGI+ P V +LV V
Sbjct: 319 VGKGGHVFNLGHGISRFTPPDAVAELVDEV 348
>gi|221202172|ref|ZP_03575207.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2M]
gi|221208767|ref|ZP_03581766.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2]
gi|221171399|gb|EEE03847.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2]
gi|221177966|gb|EEE10378.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2M]
Length = 364
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P++ E+TLQP+ R+ DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDFATEVTLQPLERFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGATLGY---VTDAVREIRRALTDG 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY + +LD + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ Y+ + R+++ ++R++ + I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHEGQRVPVITFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T +A+GLDW+V + A E + +QGNLDP L V+ + A+L
Sbjct: 260 LWLEEI-AATGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILFAPPAVVREQARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|325917270|ref|ZP_08179491.1| uroporphyrinogen decarboxylase [Xanthomonas vesicatoria ATCC 35937]
gi|325536490|gb|EGD08265.1| uroporphyrinogen decarboxylase [Xanthomonas vesicatoria ATCC 35937]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 194/354 (54%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPDVLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LSTVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P +V LV+ V+S
Sbjct: 297 GSPEAIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPDHVGVLVEAVQS 350
>gi|261856520|ref|YP_003263803.1| uroporphyrinogen decarboxylase [Halothiobacillus neapolitanus c2]
gi|261836989|gb|ACX96756.1| uroporphyrinogen decarboxylase [Halothiobacillus neapolitanus c2]
Length = 365
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 188/348 (54%), Gaps = 17/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ PIW+MRQAGRYLPEY+ R K +F+D+C + E E+TLQP+
Sbjct: 15 KNDRFIRALLREPVDCTPIWIMRQAGRYLPEYKATRAKAGSFMDLCRSAELACEVTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLN 118
R++ DAAILFSDIL I DA+G + F EGP D + +++ L +P +L
Sbjct: 75 ERFDLDAAILFSDILTIPDAMGLGLTFSAGEGPVFANPLRDRRSIEQLPLPDPEGELRY- 133
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + + +
Sbjct: 134 ----VMDAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSTKEFAHIKGLMYSDPASAH 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD LS +YL AQ+ G + IFDT G L ++ ++ + +I+S + R++
Sbjct: 190 LLLDKLSTAVTDYLNAQVRRGAQALMIFDTWGGVLSPDKYREFSLAYMNKIVSGLIREHE 249
Query: 239 NAKF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRL 294
+ I F KG G + ++ +GLDW+V + A+ Q G V QGNLDP L
Sbjct: 250 GQRIPVILFTKGGGAWAPEI-AASGADGVGLDWTVDIG-AVRQQVGGKVALQGNLDPSVL 307
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
V+ V +L G G +FNLGHGI V+P NV LV V
Sbjct: 308 YAPEAVIEQEVARVLSSYGQGSGHVFNLGHGIHQHVNPDNVKVLVDAV 355
>gi|71274865|ref|ZP_00651153.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Dixon]
gi|71901226|ref|ZP_00683327.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|170729884|ref|YP_001775317.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M12]
gi|238058178|sp|B0U6C5|DCUP_XYLFM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71164597|gb|EAO14311.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Dixon]
gi|71729001|gb|EAO31131.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|167964677|gb|ACA11687.1| Uroporphyrinogen decarboxylase [Xylella fastidiosa M12]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 196/352 (55%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ PI L P+++ L Y
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + A+ + L
Sbjct: 122 --VMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGGSKEYAHIKAMAFNAPDVLHQL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L+ ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVV 296
+ + F KG G + ++ + A+G+DW++ L A + G V QGNLDP L
Sbjct: 240 HTPLVLFGKGNGPYIAEL-AMSGTEAVGVDWTIELEDAAR-RSNGQVALQGNLDPATLYG 297
Query: 297 GNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP +DP +V LV+ V+
Sbjct: 298 TPNNIAREVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMDPDHVSALVEAVQ 349
>gi|113968783|ref|YP_732576.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-4]
gi|114049077|ref|YP_739627.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-7]
gi|117918892|ref|YP_868084.1| uroporphyrinogen decarboxylase [Shewanella sp. ANA-3]
gi|122944166|sp|Q0HN48|DCUP_SHESM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123131013|sp|Q0HQN5|DCUP_SHESR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234289|sp|A0KSA9|DCUP_SHESA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|113883467|gb|ABI37519.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-4]
gi|113890519|gb|ABI44570.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-7]
gi|117611224|gb|ABK46678.1| uroporphyrinogen decarboxylase [Shewanella sp. ANA-3]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 17/351 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RRY DAAILFSDIL + DA+G + F EGPR + P T +++ + +P DL
Sbjct: 65 RRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDDLGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 124 ----VMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R +
Sbjct: 180 MLLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTR-FA 238
Query: 239 NAKFIS---FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
+ + + F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 239 DGRQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSML 297
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 298 YAPIPRIEEEVAQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|118498225|ref|YP_899275.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida U112]
gi|194324409|ref|ZP_03058182.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida FTE]
gi|208780252|ref|ZP_03247594.1| uroporphyrinogen decarboxylase [Francisella novicida FTG]
gi|171472966|sp|A0Q8F6|DCUP_FRATN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118424131|gb|ABK90521.1| uroporphyrinogen decarboxylase [Francisella novicida U112]
gi|194321474|gb|EDX18959.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida FTE]
gi|208743901|gb|EDZ90203.1| uroporphyrinogen decarboxylase [Francisella novicida FTG]
Length = 344
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSTI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASCVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A G V QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|294670477|ref|ZP_06735357.1| hypothetical protein NEIELOOT_02194 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307756|gb|EFE48999.1| hypothetical protein NEIELOOT_02194 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 353
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 186/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGI DP++ LV +V
Sbjct: 303 IRTEVARILADYGQGSGHVFNLGHGINQHADPEHAKILVDSV 344
>gi|121634575|ref|YP_974820.1| uroporphyrinogen decarboxylase [Neisseria meningitidis FAM18]
gi|166234262|sp|A1KT40|DCUP_NEIMF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120866281|emb|CAM10022.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
FAM18]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRAEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|255322123|ref|ZP_05363270.1| uroporphyrinogen decarboxylase [Campylobacter showae RM3277]
gi|255300821|gb|EET80091.1| uroporphyrinogen decarboxylase [Campylobacter showae RM3277]
Length = 340
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 186/327 (56%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R +FL +C + E+T+QP+ DAAILFSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMRVRAAAGDFLSLCKDYKKASEVTIQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G +++FV+ EGP DPI T++ L ++ + L ++ +I + R+ L
Sbjct: 76 PLEMGMDLKFVQGEGPVFSDPIKTKDD-LDRLDVQKSIKNLDYVYDTIKLTRENLVQDKA 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCGAPWT+A+YMI GG K + ++ Y N + +L ++ Y+ QI AG
Sbjct: 135 LIGFCGAPWTIATYMIEGGGTKTYAVSKKLLYSNPEFMHQILAKVTAALIGYMKEQIKAG 194
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRR 258
V+ +QIFD+ A L + + + + + I+ A++ ++P I F KG +GY+ K
Sbjct: 195 VNAVQIFDSWAAALEDEAYFEFGWKYIMDIVDALKAEFPQIPVIVFPKGISGYLDKISGN 254
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
G+DWS P+ A E L + +QGN++P RL + + GV IL + + P
Sbjct: 255 F---EVFGVDWSTPIELAKEKLSPKYVLQGNMEPTRL-YSKEAIDAGVERILQTMKNAPH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P V +N +K V+ +
Sbjct: 311 IFNLGHGILPDVPVENAKYFIKRVQEK 337
>gi|293390872|ref|ZP_06635206.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951406|gb|EFE01525.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 189/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPHLLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R++
Sbjct: 182 LDKLADSVTLYLNAQIKAGAQAVMVFDTWGGVLAHRDYPAFSLHYMHKIVDGLIREHEGH 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+V ++ A + + +QGNLDP L
Sbjct: 242 RVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAEARRRVGHKVALQGNLDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGI---TPQVDPKNVLDLV 338
+ D V +IL G+G +FNLGHGI P PK ++D V
Sbjct: 301 ANRIEDEVRSILAAFGAGNGHVFNLGHGIHQDVPVESPKRLVDAV 345
>gi|15837933|ref|NP_298621.1| uroporphyrinogen decarboxylase [Xylella fastidiosa 9a5c]
gi|23814029|sp|Q9PDP7|DCUP_XYLFA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|9106329|gb|AAF84141.1|AE003966_2 uroporphyrinogen decarboxylase [Xylella fastidiosa 9a5c]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 196/352 (55%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L LQ + ++ PIWLMRQAGRYLPEYR +R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALQRDTVDRTPIWLMRQAGRYLPEYRAVRQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL+I DA+G + F+E EGPR+ PI L P+++ L Y
Sbjct: 63 HRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + A+ + L
Sbjct: 122 --VMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYAHIKAMAFNAPDVLHQL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ +++ YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTNAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVV 296
+ + F KG G + ++ + A+G+DW++ L A + G V QGNLDP L
Sbjct: 240 RTPLVLFGKGNGPYIAEL-AMSGTEAVGVDWTIELEDAAR-RSNGQVALQGNLDPATLYG 297
Query: 297 GNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP +DP +V LV+ V+
Sbjct: 298 TPNNIAHEVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMDPDHVSALVEAVQ 349
>gi|325127889|gb|EGC50793.1| uroporphyrinogen decarboxylase [Neisseria meningitidis N1568]
Length = 354
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRAEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|217974995|ref|YP_002359746.1| uroporphyrinogen decarboxylase [Shewanella baltica OS223]
gi|254767706|sp|B8E642|DCUP_SHEB2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|217500130|gb|ACK48323.1| uroporphyrinogen decarboxylase [Shewanella baltica OS223]
Length = 354
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 191/348 (54%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ R + +II + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLRYMQKIIDGLTRFADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 301 IPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|126172665|ref|YP_001048814.1| uroporphyrinogen decarboxylase [Shewanella baltica OS155]
gi|160877146|ref|YP_001556462.1| uroporphyrinogen decarboxylase [Shewanella baltica OS195]
gi|304410774|ref|ZP_07392391.1| uroporphyrinogen decarboxylase [Shewanella baltica OS183]
gi|307305055|ref|ZP_07584805.1| uroporphyrinogen decarboxylase [Shewanella baltica BA175]
gi|166234285|sp|A3CZN2|DCUP_SHEB5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083020|sp|A9L5A8|DCUP_SHEB9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|125995870|gb|ABN59945.1| uroporphyrinogen decarboxylase [Shewanella baltica OS155]
gi|160862668|gb|ABX51202.1| uroporphyrinogen decarboxylase [Shewanella baltica OS195]
gi|304350671|gb|EFM15072.1| uroporphyrinogen decarboxylase [Shewanella baltica OS183]
gi|306912457|gb|EFN42881.1| uroporphyrinogen decarboxylase [Shewanella baltica BA175]
gi|315269351|gb|ADT96204.1| uroporphyrinogen decarboxylase [Shewanella baltica OS678]
Length = 354
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 191/348 (54%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ R + +II + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLRYMQKIIDGLTRFADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 301 IPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|21232275|ref|NP_638192.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767592|ref|YP_242354.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990708|ref|YP_001902718.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. B100]
gi|23813977|sp|Q8P6X1|DCUP_XANCP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81306428|sp|Q4UX89|DCUP_XANC8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229484077|sp|B0RQC7|DCUP_XANCB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21114039|gb|AAM42116.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572924|gb|AAY48334.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732468|emb|CAP50662.1| Uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris]
Length = 354
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 195/353 (55%), Gaps = 18/353 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLN-PNIDLFLNYL 120
R+ DAAILFSDIL I DA+G + FVE EGP+ P+ + I+ L P+++ L Y
Sbjct: 63 ERFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDADAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + + L
Sbjct: 122 --VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPQLLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LSTVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIAQELERGSGEE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVV 296
+ + F KG G + + + A+G+DW++ L+ A E + G V QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVSEL-AASGAEAVGVDWTISLADAAE-RAGGRVALQGNLDPATLYG 297
Query: 297 GNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V LD G +FNLGHG++P ++P +V LV+ V++
Sbjct: 298 SPDAIRSEVGKTLDSYAYGNGGSREGHVFNLGHGMSPDMNPDHVGVLVEAVQT 350
>gi|256078081|ref|XP_002575326.1| uroporphyrinogen decarboxylase [Schistosoma mansoni]
gi|238660562|emb|CAZ31559.1| uroporphyrinogen decarboxylase [Schistosoma mansoni]
Length = 364
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I+ +G ++ P+W+MRQAGRYLPE+R++R+K +F ++C TPE +TLQPI
Sbjct: 9 KNDNIIRAAKGEAVSRLPVWIMRQAGRYLPEFRELREK-HDFFEICRTPELACAVTLQPI 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLF--LNY 119
R++ DAAI+FSDILVI ALG V+ GP+ +P+ + ++ LN +D+ LNY
Sbjct: 68 NRFDLDAAIIFSDILVIPQALGMEVKMQPGVGPKFTEPLNSVNDLDRLNAQVDVRKELNY 127
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+++SI++ R +L + LIGF GAPWT+ SYMI GG + + + + Y ++
Sbjct: 128 ---VYESITLTRYRLNGRVPLIGFAGAPWTLMSYMIEGGSSNTYSKAKKWLYTEPQSSQR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+ E+LI Q+ +G ++Q+F++HAG L + F + + +I + VR + N
Sbjct: 185 LLSLLTQKVVEHLIQQVLSGAQLLQVFESHAGFLSPYLFNTFCLPYLKQISNEVRSRLLN 244
Query: 240 A---------KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNL 289
I FAK Y L + D + I LDW++ A + +QGNL
Sbjct: 245 EYRIPRDSIPPLIVFAKDGHYALTELSK-ADYDVISLDWTISPRLARNTVGSHITLQGNL 303
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV---LDLVKTVRS 343
DP L + V +++ G +I NLGHGI P VDP V +DLV + S
Sbjct: 304 DPCALYSNENQISSLVKEMINDFGIHRYIVNLGHGIYPDVDPDKVNKFVDLVHHLSS 360
>gi|188527546|ref|YP_001910233.1| uroporphyrinogen decarboxylase [Helicobacter pylori Shi470]
gi|238058040|sp|B2UTM1|DCUP_HELPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|188143786|gb|ACD48203.1| uroporphyrinogen decarboxylase [Helicobacter pylori Shi470]
Length = 339
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I+ + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIEAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|251793495|ref|YP_003008224.1| uroporphyrinogen decarboxylase [Aggregatibacter aphrophilus NJ8700]
gi|247534891|gb|ACS98137.1| uroporphyrinogen decarboxylase [Aggregatibacter aphrophilus NJ8700]
Length = 354
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 190/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ PIW+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELNCEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPHLLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L E+ ++ R + +I+ + R++
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHREYPEFSLRYMHKIVDGLIREHDGR 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDVAEARRRIGHKVALQGNMDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ D V +IL G G +FNLGHGI P PK ++D V
Sbjct: 301 AGRIEDEVRSILAAFGEGSGHVFNLGHGIHQDVPTESPKVLVDAV 345
>gi|86133876|ref|ZP_01052458.1| uroporphyrinogen decarboxylase [Polaribacter sp. MED152]
gi|85820739|gb|EAQ41886.1| uroporphyrinogen decarboxylase [Polaribacter sp. MED152]
Length = 342
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 194/341 (56%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V N GP + +PI +Q+ ++ P+I L Y++
Sbjct: 67 DAAILFSDILVIPQAMNIEVEMKPNFGPYLPNPIRSQKDLDSVIIPDIQDSLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I ++KL + I LIGF G+PWT+ Y + G K+ + + + N + LL ++
Sbjct: 124 AIKATKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKELCFTNPIVAHTLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ P I+F
Sbjct: 184 DTTIAYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYMQQIIDALKDDAP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + ++A+G+DW+ A L + +QGN DP RL +
Sbjct: 241 GKGCWFALSDMAK-SGASALGVDWTCSAKNARYLSGGQITLQGNFDPSRLFSSPSEIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +++ G +I NLGHGI P + +N V V+ K
Sbjct: 300 VTQMINEFGKDKYIVNLGHGILPNIPVENAKAFVDAVKEYK 340
>gi|270265435|ref|ZP_06193694.1| uroporphyrinogen decarboxylase [Serratia odorifera 4Rx13]
gi|270040628|gb|EFA13733.1| uroporphyrinogen decarboxylase [Serratia odorifera 4Rx13]
Length = 355
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 193/355 (54%), Gaps = 16/355 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 2 MNELKNDRYLRALQRMPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT++ ++ + +P ++
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFSSPITSRADVDKLPVFDPEVE 121
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 122 LGY-----VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEP 176
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ +
Sbjct: 177 ATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLL 236
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 237 RENDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDP 295
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V IL G G +FNLGHGI V P+N V+ V ++
Sbjct: 296 SMLYASPERIGQEVETILAGFGHGEGHVFNLGHGIHLDVPPENAGVFVEAVHAQS 350
>gi|24372030|ref|NP_716072.1| uroporphyrinogen decarboxylase [Shewanella oneidensis MR-1]
gi|29611763|sp|Q8EJM8|DCUP_SHEON RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|24345899|gb|AAN53517.1|AE015492_4 uroporphyrinogen decarboxylase [Shewanella oneidensis MR-1]
Length = 354
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 193/349 (55%), Gaps = 13/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R + +
Sbjct: 182 LDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTR-FADG 240
Query: 241 KFIS---FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ + F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVGQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|15611618|ref|NP_223269.1| uroporphyrinogen decarboxylase [Helicobacter pylori J99]
gi|8928083|sp|Q9ZLM8|DCUP_HELPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|4155089|gb|AAD06123.1| UROPORPHYRINOGEN DECARBOXYLASE [Helicobacter pylori J99]
Length = 339
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 189/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGVYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|315586711|gb|ADU41092.1| uroporphyrinogen decarboxylase [Helicobacter pylori 35A]
Length = 340
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 184/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 17 PIWMMRQAGRYLSEYQESRKKVGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 76
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ FV +GP T + + I + LNY ++ +IS R+KL
Sbjct: 77 PLEMGLNLEFVPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 134 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 194 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 252
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G
Sbjct: 253 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGHQGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 311 IFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|56707226|ref|YP_169122.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669696|ref|YP_666253.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301261|ref|YP_001121229.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224456287|ref|ZP_03664760.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254371441|ref|ZP_04987442.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC033]
gi|254373568|ref|ZP_04989054.1| hypothetical protein FTCG_01665 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254375033|ref|ZP_04990513.1| uroporphyrinogen decarboxylase [Francisella novicida GA99-3548]
gi|254874065|ref|ZP_05246775.1| hemE, uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|81677145|sp|Q5NIM0|DCUP_FRATT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123063631|sp|Q14K23|DCUP_FRAT1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172044161|sp|A4IW07|DCUP_FRATW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56603718|emb|CAG44680.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320029|emb|CAL08063.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049038|gb|ABO46109.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569680|gb|EDN35334.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC033]
gi|151571292|gb|EDN36946.1| hypothetical protein FTCG_01665 [Francisella novicida GA99-3549]
gi|151572751|gb|EDN38405.1| uroporphyrinogen decarboxylase [Francisella novicida GA99-3548]
gi|254840064|gb|EET18500.1| hemE, uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158334|gb|ADA77725.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis NE061598]
gi|332678961|gb|AEE88090.1| Uroporphyrinogen III decarboxylase [Francisella cf. novicida Fx1]
Length = 344
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A G V QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|118475174|ref|YP_892592.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp. fetus
82-40]
gi|166234240|sp|A0RQV9|DCUP_CAMFF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118414400|gb|ABK82820.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp. fetus
82-40]
Length = 343
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 190/327 (58%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY +R +FL +C + E+TLQP+ DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMAVRDAAGDFLSLCKDYKKASEVTLQPVDILGVDAAIMFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G ++F++ EGP + PI + + L +++ + L ++ +I + R+KL +
Sbjct: 76 PLEMGMELKFIKGEGPVFENPILSMD-SLDKLSVEKAVKNLSYVYDTIKLTREKLSSDKA 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCGAPWT+A+YMI GG K + ++ Y N + + +L +++ YL QI AG
Sbjct: 135 LIGFCGAPWTIATYMIEGGSTKTYNISKKMLYDNPQFLHAILRKVTNALKLYLEEQIKAG 194
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRR 258
V+ +QIFD+ A L ++ + + + ++ ++ +YP+ I F KG +G++ K +
Sbjct: 195 VNAVQIFDSWASALEQNAYLEFGFSYINELVDYIKSQYPDIPVIVFPKGISGFLNKIGGK 254
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ G+DWS PL A E L +QGN++P RL + DGV+ IL ++
Sbjct: 255 F---DVFGVDWSTPLKMAKETLGSRYVLQGNMEPTRL-YSKDAIDDGVDEILSIMRGHRH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P V +N +K+V+ +
Sbjct: 311 IFNLGHGILPDVPVENAKYFIKSVQEK 337
>gi|87120721|ref|ZP_01076614.1| uroporphyrinogen decarboxylase [Marinomonas sp. MED121]
gi|86163949|gb|EAQ65221.1| uroporphyrinogen decarboxylase [Marinomonas sp. MED121]
Length = 367
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 188/348 (54%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYR R +FL +C E+ E+TLQP+
Sbjct: 6 KNDRFIRALLKQPVDTTPVWMMRQAGRYLPEYRASRAHAGDFLSLCKNDEFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF----LNY 119
RY DAAILFSDIL I DA+G+ + F EGP+ + E ++D +N
Sbjct: 66 ERYELDAAILFSDILTIPDAMGQGLYFETGEGPKFKKVIRTE-----ADVDALPIAKVND 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++++ +R L + LIGF G+PWT+A+YM+ GG KD + Y++ +
Sbjct: 121 LDYVMKAVTTIRNALGGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKGMMYKSPEILHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+ +YL QI AG +QIFDT G L +++ ++ + +II + R +
Sbjct: 181 LLRKLAISVTDYLNGQIKAGAQAVQIFDTWGGVLSGPKYQEFSLMYMKQIIDGLIRVHDG 240
Query: 240 AKF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
K I F K G L+N + ++A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 KKIPVIMFTKNGGQWLENM-AASGTDALGLDWTTDMAEARARVGNKVALQGNIDPCVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ D V +L G+G +FNLGHGI VDP+ L+ V
Sbjct: 300 DKDVIRDQVGEVLAGFGNGSGHVFNLGHGIHQFVDPEQPKYLIDAVHE 347
>gi|54114059|gb|AAV29663.1| NT02FT1754 [synthetic construct]
Length = 344
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 191/339 (56%), Gaps = 9/339 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++RY+
Sbjct: 6 LDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQRYDL 65
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L ++ ++
Sbjct: 66 DAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAV 125
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ ++ LIGF G+PWT+A+YMI G K + R Y N + + LL L+D+
Sbjct: 126 KTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADI 183
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N + F K
Sbjct: 184 TIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIVFFTK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVN 306
G + + + + +G+DWSV L A G V QGN DP L Q + + V
Sbjct: 243 GGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETVR 301
Query: 307 AILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 302 ANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|332995416|gb|AEF05471.1| uroporphyrinogen decarboxylase [Alteromonas sp. SN2]
Length = 363
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 192/347 (55%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+TLQP+
Sbjct: 14 KNDRYLRALSKQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGPR PIT + +I L +P + L
Sbjct: 74 RRFPLDAAILFSDILTIPDAMGLELYFETGEGPRFKKPITCKADVDKIGLPDPEGE--LQ 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ +
Sbjct: 132 Y---VMNAVRTIRRELNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMAFAEPAILH 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+D EYL AQI AG + IFDT G L ++++++ + + RI+ + R+
Sbjct: 189 ALLEKLADSVTEYLNAQIAAGAQSVMIFDTWGGVLSPRDYKDFSLQYMARIVDGLTREAD 248
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 249 GRKVPVTLFTKNGGMWLESI-AATGCDAVGLDWTIDIAEARARIGDKVALQGNMDPSMLY 307
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V IL G G +FNLGHGI V P+N V +V
Sbjct: 308 ASPERIREEVGTILSGYGEGSGHVFNLGHGIHLDVPPENAGVFVNSV 354
>gi|315023922|gb|EFT36924.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer RA-YM]
Length = 341
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 191/337 (56%), Gaps = 12/337 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL PI+R+
Sbjct: 8 LKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITLMPIKRFPL 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G + + E+ GP ++ PI T+E + P+++ L+Y +F
Sbjct: 67 DAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVNERLSY---VFD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL ++
Sbjct: 124 SIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHLLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P + F
Sbjct: 184 DTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PLTHVVVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L+ L+ ++A+G+DW++ A +QGN DP RL + +
Sbjct: 241 GKGCWFALEEM-TLSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTPETIRKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 300 VDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 336
>gi|325335712|gb|ADZ11986.1| Uroporphyrinogen-III decarboxylase [Riemerella anatipestifer RA-GD]
Length = 346
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 191/337 (56%), Gaps = 12/337 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL PI+R+
Sbjct: 13 LKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITLMPIKRFPL 71
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G + + E+ GP ++ PI T+E + P+++ L+Y +F
Sbjct: 72 DAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVNERLSY---VFD 128
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL ++
Sbjct: 129 SIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHLLLQKIT 188
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P + F
Sbjct: 189 DTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PLTHVVVF 245
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L+ L+ ++A+G+DW++ A +QGN DP RL + +
Sbjct: 246 GKGCWFALEEM-TLSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTPETIRKM 304
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 305 VDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 341
>gi|108563010|ref|YP_627326.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPAG1]
gi|107836783|gb|ABF84652.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPAG1]
Length = 340
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 17 PIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 76
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + N + + LNY ++ +IS R+KL
Sbjct: 77 PLEMGLNLEFIPKKGPHFLETITDLKSVENLKVGAYKQLNY---VYDTISQTRQKLSKEK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 134 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 194 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 252
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 253 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEGILKVMGNQGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 311 IFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|158749613|ref|NP_062082.1| uroporphyrinogen decarboxylase [Rattus norvegicus]
gi|149035558|gb|EDL90239.1| uroporphyrinogen decarboxylase, isoform CRA_a [Rattus norvegicus]
gi|165970690|gb|AAI58691.1| Uroporphyrinogen decarboxylase [Rattus norvegicus]
Length = 367
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 185/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ A + LL
Sbjct: 134 VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQKPLASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 194 ILTDALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|296313856|ref|ZP_06863797.1| uroporphyrinogen decarboxylase [Neisseria polysaccharea ATCC 43768]
gi|296839586|gb|EFH23524.1| uroporphyrinogen decarboxylase [Neisseria polysaccharea ATCC 43768]
Length = 354
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 185/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NVQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ IL G G +FNLGHGI DPK+ LV TV
Sbjct: 303 IRTEAARILADYGHGSGHVFNLGHGINQHADPKHAKILVDTV 344
>gi|169861516|ref|XP_001837392.1| uroporphyrinogen decarboxylase [Coprinopsis cinerea okayama7#130]
gi|116501413|gb|EAU84308.1| uroporphyrinogen decarboxylase [Coprinopsis cinerea okayama7#130]
Length = 362
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 196/340 (57%), Gaps = 19/340 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGRYLPE+R++RK + F ++C TP+ +E+TLQPIRRY
Sbjct: 15 LLRAARGEKTERAPVWVMRQAGRYLPEFREVRKSHE-FFEVCRTPDLAMEVTLQPIRRYK 73
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDL--FLNYLL 121
DA+I+FSDILV+ A+G V + N GP +P+ ++ L +D+ L Y
Sbjct: 74 GLLDASIIFSDILVVPQAMGMEV--LMNPGPSFPEPLDVPADVEKLRKEVDVNKELGY-- 129
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++I+ RK L + LIGFCGAPWT+ SYMI GG K + + + ++ LL
Sbjct: 130 -VFEAITQTRKGLEGVVPLIGFCGAPWTLFSYMIEGGGSKTLQKAKTWLFKYPEESKALL 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK----- 236
++ V ++L+ Q+ AG ++Q+FD+ AG L H+F+ ++ ++ I VR++
Sbjct: 189 HRIAVVCVDFLVGQVKAGAQLLQVFDSWAGELSPHDFDRFSFPTLQYIAKTVRQRLAEAG 248
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLV 295
P+ FAKGA Y LK + + +GLDW + + A + + +QGN+DP L
Sbjct: 249 LPDVPLTLFAKGANYALKKLADESGYDVLGLDWCIDPAEARRIVGDKVALQGNMDPNVLY 308
Query: 296 VGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNV 334
G + + V + G G +I NLGHGITP VDP+++
Sbjct: 309 GGREAIEQTVKRMSAAFSGKGGWIANLGHGITPGVDPEDM 348
>gi|157368536|ref|YP_001476525.1| uroporphyrinogen decarboxylase [Serratia proteamaculans 568]
gi|167012318|sp|A8G8F7|DCUP_SERP5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157320300|gb|ABV39397.1| uroporphyrinogen decarboxylase [Serratia proteamaculans 568]
Length = 354
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 192/355 (54%), Gaps = 16/355 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PIT++ ++ +P ++
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY-----VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ +
Sbjct: 176 ATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLL 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 236 RENDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V IL G G +FNLGHGI P V P+N V+ V ++
Sbjct: 295 SMLYASPERIGQEVETILAGFGHGEGHVFNLGHGIHPDVPPENAGAFVEAVHAQS 349
>gi|172045869|sp|Q1CTS0|DCUP_HELPH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 339
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + N + + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVENLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEGILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|224826220|ref|ZP_03699322.1| uroporphyrinogen decarboxylase [Lutiella nitroferrum 2002]
gi|224601321|gb|EEG07502.1| uroporphyrinogen decarboxylase [Lutiella nitroferrum 2002]
Length = 355
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 188/343 (54%), Gaps = 6/343 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEYR R + +F+ +C +PE+ E+TLQP+
Sbjct: 5 KNDTFLRALLKEPVEYTPIWMMRQAGRYLPEYRATRARAGSFMGLCTSPEFATEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQHPLRDEAAIKALSVAP-MEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YMI GG D + Y + +LD
Sbjct: 124 FDAVASIRKALDGRVPLIGFSGSPFTLACYMIEGGGSDDFRNVKAMLYSRPELLHHILDI 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ +YL AQI AG +QIFDT G L ++ ++ + +II+ ++R+ +
Sbjct: 184 NARTVTDYLNAQIDAGAQAVQIFDTWGGALTHAAYKTFSLAYMQKIIAGLKREADGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L++ + ++AIGLDW+ ++ A + + +QGNLDP L +
Sbjct: 244 VIVFTKGGGQWLEDIATI-GADAIGLDWTTDIADARRRVGADVALQGNLDPNVLFASPEG 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ IL G G +FNLGHGI+ V+P + LV+ V
Sbjct: 303 IEKEVSRILSSYGQGSGHVFNLGHGISQFVNPDHAAVLVEAVH 345
>gi|91790102|ref|YP_551054.1| uroporphyrinogen decarboxylase [Polaromonas sp. JS666]
gi|122967321|sp|Q123Y6|DCUP_POLSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91699327|gb|ABE46156.1| uroporphyrinogen decarboxylase [Polaromonas sp. JS666]
Length = 369
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 18/341 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R + +F+ + +Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PVWLMRQAGRYLPEYRATRARAGSFMGLATNTDYATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F EGPR E + + + L +F +++ +RK L + L
Sbjct: 83 PDAMGLGLSFALGEGPRFATPVRDEAAVARLEVP-DMGKLRYVFDAVTSIRKALNGRVPL 141
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+PWT+A YM+ G D+ + YQ + +L +D A YL AQI AG
Sbjct: 142 IGFSGSPWTLACYMVEGAGSDDYRLVKTMLYQRPDLMHKMLAVNADAVAAYLNAQIEAGA 201
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ IFD+ G L + F+ ++ R++ ++R++ K + F KG G L+
Sbjct: 202 QAVMIFDSWGGVLADAAFQTFSLAYTARVLGQLKREHDGVKIPRLVFTKGGGQWLQAMAA 261
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGP----VQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
L D +GLDW+V L+ A + + GP +QGNLDP L + V A+LD G
Sbjct: 262 L-DCEVLGLDWTVNLAQARARVGENGPHAKALQGNLDPNVLFASPAQIETEVAAVLDSFG 320
Query: 314 S--------GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GP IFNLGHGI+ P++V LV V +
Sbjct: 321 RPHLDSSQPGPTHIFNLGHGISQHTPPESVEVLVNAVHTHS 361
>gi|238022103|ref|ZP_04602529.1| hypothetical protein GCWU000324_02009 [Kingella oralis ATCC 51147]
gi|237866717|gb|EEP67759.1| hypothetical protein GCWU000324_02009 [Kingella oralis ATCC 51147]
Length = 353
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/330 (38%), Positives = 187/330 (56%), Gaps = 12/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY+ R +F+ +C + E+TLQPI R+N DAAILFSDIL I
Sbjct: 22 PIWLMRQAGRYLPEYKTTRAFAGDFMSLCRNKDLATEVTLQPIDRFNLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PIT-TQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G +RF EGP+ + P+ Q+I LL P+++ LNY +F++++ +RK L
Sbjct: 82 PDAMGLGLRFETGEGPKFERPLQHEQDIELLAVPDMNK-LNY---VFEAVAGIRKALDGR 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YMI G +D + Y + +LD + +YL QI
Sbjct: 138 VPLIGFSGSPFTLACYMIEGSGSRDWRTVKTMLYTRPDLLHRVLDINTQAITQYLNHQIE 197
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
G +QIFDT G L F+ ++ + +II +++R + A I F KG G L+
Sbjct: 198 HGAQAVQIFDTWGGTLSHEAFQTFSLHYIKQIIGSLKRNHNGATIPVIVFTKGGGQWLEQ 257
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ ++AIGLDW+ ++ A + + +QGNLDP+ L + + IL G
Sbjct: 258 LAN-SGADAIGLDWTTDIAQARAHVNDQVALQGNLDPLALFGTPKTICTEAAHILAGYGH 316
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +FNLGHGI P++V LV+TV
Sbjct: 317 GHGHVFNLGHGINQHTPPEHVEILVETVHE 346
>gi|253698671|ref|YP_003019860.1| uroporphyrinogen decarboxylase [Geobacter sp. M21]
gi|259645149|sp|C6E7R9|DCUP_GEOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|251773521|gb|ACT16102.1| uroporphyrinogen decarboxylase [Geobacter sp. M21]
Length = 339
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 191/345 (55%), Gaps = 16/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+
Sbjct: 1 MNTR---FLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELATEVTV 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ DAAILFSDIL + +G + F GP PI T ++ L P ++ +
Sbjct: 57 QPVDILGVDAAILFSDILTPIEPMGMELDF--TPGPVFAKPIRTMADVEALKIPKMETDV 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y + +
Sbjct: 115 PYVL---DAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ ++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R
Sbjct: 172 AALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F KGAG ML+ ++ + +GLDW V L A ++ + VQGNLDP L
Sbjct: 231 -NIPVIHFVKGAGTMLEIVKQ-AGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAP 288
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
N+++ V +LD P IFNLGHGI P V P+ + +V V
Sbjct: 289 NEIIEREVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCV 333
>gi|317012419|gb|ADU83027.1| uroporphyrinogen decarboxylase [Helicobacter pylori Lithuania75]
Length = 339
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ FV +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFVPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y + LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPKVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|313683211|ref|YP_004060949.1| uroporphyrinogen decarboxylase [Sulfuricurvum kujiense DSM 16994]
gi|313156071|gb|ADR34749.1| uroporphyrinogen decarboxylase [Sulfuricurvum kujiense DSM 16994]
Length = 347
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 188/329 (57%), Gaps = 12/329 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++RK+ NFL++C+ P+ E+T+QP+ DAAILFSDILV+
Sbjct: 18 PVWMMRQAGRYLPEYMEVRKRAGNFLNLCHAPDMAAEVTIQPLDIVGVDAAILFSDILVV 77
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNI--DLFLNYLLPIFQSISILRKKLP-- 135
+ +G + F++ EGP D PI ++E LN I + + L ++ +I +LRK+L
Sbjct: 78 PNEMGMKLDFIKGEGPVFDKPIASEED--LNELIGGEEAASKLTYVYDTIKLLRKQLDER 135
Query: 136 -NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF GAPWT+A+YMI G K + + Y N + +L +++V Y+
Sbjct: 136 GDDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSNPDLLHKILHKVTEVVKLYMEK 195
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
QI AG+DV+QIFD+ A + + ++ + I ++ KYP+ I F KG L
Sbjct: 196 QIQAGIDVVQIFDSWAAAIEPSRYNEFSWSYMVEIADYLKAKYPHIPIIMFPKGIPAFLD 255
Query: 255 NYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ + + G+DWS P++ A E L +QGN++P RL Q V AI +++G
Sbjct: 256 --QVYGNFDVFGVDWSTPMALAKEKLGDRYVLQGNMEPCRLYSKEQTTA-CVEAIQNIMG 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P V +N V+ +
Sbjct: 313 GKRHIFNLGHGILPDVPVENAQHFVRECQ 341
>gi|295678129|ref|YP_003606653.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1002]
gi|295437972|gb|ADG17142.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1002]
Length = 366
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 183/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNATRGRAGSFLGLAKNPAFATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLP-- 135
DA+G + FV EGP+ P+ T++ L P+ID L Y+ + I + K
Sbjct: 83 PDAMGLGLEFVNGEGPKFARPVRTEDDVARLAVPDIDATLRYVTDAVREIRMALKDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y +L+ + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLLQRILEINARAVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ R + +++S ++R++ K I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGIYQRFSLRYIEQVVSQLKREHDGEKVPVIAFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + +A+GLDW+V L A E + + +QGN+DP L + A+LD
Sbjct: 263 DDI-AASGVDAVGLDWTVNLGKARERVGGKVALQGNIDPSVLFAPPAAIRMEARAVLDSF 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|332531633|ref|ZP_08407530.1| uroporphyrinogen decarboxylase [Hylemonella gracilis ATCC 19624]
gi|332038996|gb|EGI75425.1| uroporphyrinogen decarboxylase [Hylemonella gracilis ATCC 19624]
Length = 369
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 185/344 (53%), Gaps = 24/344 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R++ +F+ + +Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 25 PLWLMRQAGRYLPEYRATRERAGSFMGLATNVDYATEVTLQPLDRYALDAAILFSDILTV 84
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F + EGPR P+ + L P++D L Y +F +++ +RK L
Sbjct: 85 PDAMGLGLSFAQGEGPRFASPVRDEAAVAALAVPDLDK-LRY---VFDAVTSIRKALDGR 140
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 141 VPLIGFSGSPWTLACYMVEGAGSDDYRLVKSMLYARPDLMHRILQVNADAVAAYLNAQID 200
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF---ISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + + I F KG G L
Sbjct: 201 AGAQAVMVFDSWGGVLADGVFQQFSLAYTARVLAQLKRTGVDGQVVPRIVFTKGGGLWLH 260
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEGP----VQGNLDPMRLVVGNQVMIDGVNAILD 310
L D +GLDW+V L A L EGP +QGNLDP L + V +L
Sbjct: 261 EMGAL-DCEVLGLDWTVNLGTARALVGEGPRGKALQGNLDPNVLFAPPTAIEAEVAKVLA 319
Query: 311 VLGS--------GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+ GP IFNLGHGI+ P++V LV+ V ++
Sbjct: 320 SFGAPHTDPSRPGPTHIFNLGHGISQHTPPEHVTALVEAVHTQS 363
>gi|313206848|ref|YP_004046025.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer DSM 15868]
gi|312446164|gb|ADQ82519.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer DSM 15868]
Length = 342
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 191/337 (56%), Gaps = 12/337 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL PI+R+
Sbjct: 9 LKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITLMPIKRFPL 67
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G + + E+ GP ++ PI T+E + P+++ L+Y +F
Sbjct: 68 DAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVNERLSY---VFD 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL ++
Sbjct: 125 SIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHLLLQKIT 184
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P + F
Sbjct: 185 DTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PLTHVVVF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L+ L+ ++A+G+DW++ A +QGN DP RL + +
Sbjct: 242 GKGCWFALEEM-TLSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTPETIRKM 300
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 301 VDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 337
>gi|114778763|ref|ZP_01453573.1| uroporphyrinogen decarboxylase [Mariprofundus ferrooxydans PV-1]
gi|114551014|gb|EAU53577.1| uroporphyrinogen decarboxylase [Mariprofundus ferrooxydans PV-1]
Length = 355
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 182/331 (54%), Gaps = 6/331 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYL EYR R + FL++C +PE E+TLQPI DAAILFSDILV+
Sbjct: 22 PVWMMRQAGRYLAEYRATRARAGGFLNLCRSPELCSEVTLQPIDILGADAAILFSDILVV 81
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+A+G + F EGP+ DPIT + P +D L + ++S +R+ L +
Sbjct: 82 PEAMGMELTFGVGEGPKFPDPITCRADVEKLPVLDDPSKELGYVMDAVSTIRRDLNGRVP 141
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A+YM+ GG K+ + + + + LL+ L+D A YL QI G
Sbjct: 142 LIGFAGSPWTLATYMVEGGGSKNFSKVKAMMFNEPETMHLLLEKLADSVAAYLNGQIANG 201
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYR 257
+QIFDT G L ++ ++ + RI+ + R+ + I ++KG L+
Sbjct: 202 AQAVQIFDTWGGILNTSNYKEFSLAYMQRIVQQLTRENDGRRVPVILYSKGGMGWLEAMA 261
Query: 258 RLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG- 315
T + +GLDWS+ + A + +QGN+DP L + + V IL G G
Sbjct: 262 D-TGCDVLGLDWSIDIDVAKARVGDRVALQGNMDPTMLYAKPERIRAEVKDILARFGHGN 320
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+FNLGHGITP V P++ ++ K VR E +
Sbjct: 321 GHVFNLGHGITPDVPPEHAIEFFKAVREESV 351
>gi|239993391|ref|ZP_04713915.1| uroporphyrinogen decarboxylase [Alteromonas macleodii ATCC 27126]
Length = 363
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 191/347 (55%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+TLQP+
Sbjct: 14 KNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGPR +PIT + +I L +P + L
Sbjct: 74 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKNPITCKADVDKIGLPDPEGE--LQ 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +R++L + LIGF G+PWT+A+YMI GG K + + A+ +
Sbjct: 132 Y---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFAEPATLH 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L+D EYL AQI AG + +FDT G L +++ ++ + + RI+S + R+
Sbjct: 189 ALLAKLADSVTEYLNAQIAAGAQSVMVFDTWGGVLSPRDYKEFSLQYMERIVSGLTRENE 248
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
K F K G L++ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 249 GRKVPVTLFTKNGGMWLESI-AATGCDAVGLDWTIDIKEARARIGDKVALQGNMDPSMLY 307
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
Q + V +IL+ G G +FNLGHGI V P+N V V
Sbjct: 308 AQPQRIEQEVASILEGYGEGSGHVFNLGHGIHLDVPPENAGVFVNAV 354
>gi|332304543|ref|YP_004432394.1| uroporphyrinogen decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171872|gb|AEE21126.1| uroporphyrinogen decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 355
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F + EGP+ P+T L P+ + L Y
Sbjct: 65 RRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFARPLTCMADIQNLPAPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YMI GG K + + A+ + +A + L
Sbjct: 124 --VMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPKALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++++++ + + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIAAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K AG L++ T + +GLDW++ + A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKNAGMWLESIAA-TGCDGVGLDWTIDIDNAKARIGDKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P+N V V
Sbjct: 301 PERIEQEVQTILAGFGEGSGHVFNLGHGIHLDVPPENAKVFVDAVH 346
>gi|329663263|ref|NP_001192487.1| uroporphyrinogen decarboxylase [Bos taurus]
gi|297473251|ref|XP_002686475.1| PREDICTED: uroporphyrinogen decarboxylase [Bos taurus]
gi|296488965|gb|DAA31078.1| uroporphyrinogen decarboxylase [Bos taurus]
Length = 367
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLQDPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMSQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ A
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVSKRVKAGLQEAGL 253
Query: 241 ---KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGKLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|261380377|ref|ZP_05984950.1| uroporphyrinogen decarboxylase [Neisseria subflava NJ9703]
gi|284796902|gb|EFC52249.1| uroporphyrinogen decarboxylase [Neisseria subflava NJ9703]
Length = 353
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 188/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALGGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI +P++ LV TV
Sbjct: 303 IRTEVARILADYGNGSGHVFNLGHGINQHANPEHAKILVDTV 344
>gi|332673597|gb|AEE70414.1| uroporphyrinogen decarboxylase [Helicobacter pylori 83]
Length = 340
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 184/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 17 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 76
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 77 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y S LL+ LS EYL QI A
Sbjct: 134 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSESEVLKALLEKLSLELIEYLSLQIQA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 194 GANAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 252
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G
Sbjct: 253 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGHQGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 311 IFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|237750733|ref|ZP_04581213.1| uroporphyrinogen decarboxylase [Helicobacter bilis ATCC 43879]
gi|229373823|gb|EEO24214.1| uroporphyrinogen decarboxylase [Helicobacter bilis ATCC 43879]
Length = 341
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 191/328 (58%), Gaps = 13/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY+ RK+ KNF+D+C + E+TLQPI + DAAILFSDILVI
Sbjct: 16 PIWMMRQAGRYLDEYKATRKRAKNFIDLCQRVDLATEVTLQPIDILDVDAAILFSDILVI 75
Query: 81 ADALGRNVRFVENEGPR-MDPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F E GP+ + IT +E + +L PN L+Y +++ + +RK+L
Sbjct: 76 PYEMGLPLEFKEGFGPQFLQTITDEESLGMLKPNAHARLSY---VYECVDSVRKRLAKDK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAPWT+A+YMI G K + +++ YQN + + LL L+D +YL QI A
Sbjct: 133 ALIGFSGAPWTLATYMIEGHGSKSYEKSKKMLYQNPKLLHALLQKLTDEIKQYLSMQIKA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + + +FD+ A L + ++ + + I + ++ +P I+F +G G L++
Sbjct: 193 GANAVMLFDSWANALEKSKYLEFGWFYLQDIANYLKATFPQIPLIAFPRGVGAFLESLHG 252
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
D +G+DW + + A E K G +QGNL+P RL M +GV +IL+V+ +
Sbjct: 253 KFD--VLGIDWQIDMKEAKE--KVGDRFVLQGNLEPARL-YDYSSMKEGVVSILEVMRNS 307
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ + +N + LVK VR
Sbjct: 308 GHIFNLGHGMIKDLPRENAIALVKLVRE 335
>gi|28198490|ref|NP_778804.1| uroporphyrinogen decarboxylase [Xylella fastidiosa Temecula1]
gi|182681167|ref|YP_001829327.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M23]
gi|32129491|sp|Q87DV0|DCUP_XYLFT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058177|sp|B2I9F9|DCUP_XYLF2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28056574|gb|AAO28453.1| uroporphyrinogen decarboxylase [Xylella fastidiosa Temecula1]
gi|182631277|gb|ACB92053.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M23]
gi|307579614|gb|ADN63583.1| uroporphyrinogen decarboxylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 354
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 197/352 (55%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ PI L P+++ L Y
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDVLHQL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L+ ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVV 296
+ + F KG G + ++ + A+G+DW++ L A + G V QGNLDP L
Sbjct: 240 HTPLVLFGKGNGPYIAEL-AMSGTEAVGVDWTIELEDAAR-RSNGQVALQGNLDPATLYG 297
Query: 297 GNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP ++P +V LV+ V+
Sbjct: 298 TPNNIAREVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMNPDHVSALVEAVQ 349
>gi|120597368|ref|YP_961942.1| uroporphyrinogen decarboxylase [Shewanella sp. W3-18-1]
gi|146294492|ref|YP_001184916.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens CN-32]
gi|166234288|sp|A4YAY4|DCUP_SHEPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234290|sp|A1RFE3|DCUP_SHESW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120557461|gb|ABM23388.1| uroporphyrinogen decarboxylase [Shewanella sp. W3-18-1]
gi|145566182|gb|ABP77117.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens CN-32]
gi|319427856|gb|ADV55930.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens 200]
Length = 354
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 194/349 (55%), Gaps = 13/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI--YLLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R + +
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTR-FADG 240
Query: 241 KFIS---FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ + F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V+ IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVSQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|255065155|ref|ZP_05317010.1| uroporphyrinogen decarboxylase [Neisseria sicca ATCC 29256]
gi|255050576|gb|EET46040.1| uroporphyrinogen decarboxylase [Neisseria sicca ATCC 29256]
Length = 353
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 185/344 (53%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L +
Sbjct: 65 DRFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVGSIRKALDGCVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L+ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLEGMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHE 346
>gi|317181919|dbj|BAJ59703.1| uroporphyrinogen decarboxylase [Helicobacter pylori F57]
Length = 339
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 184/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSKPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|330815051|ref|YP_004358756.1| Uroporphyrinogen decarboxylase [Burkholderia gladioli BSR3]
gi|327367444|gb|AEA58800.1| Uroporphyrinogen decarboxylase [Burkholderia gladioli BSR3]
Length = 375
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 186/345 (53%), Gaps = 16/345 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ RY
Sbjct: 22 LRALRREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLERYPL 81
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F EGP+ P+ T+ L P+I L Y +
Sbjct: 82 DAAILFSDILTIPDAMGLGLEFQAGEGPKFASPVRTEADVARLAVPDIGATLGY---VTD 138
Query: 126 SISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 139 AVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMQRI 198
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD D A YL AQI AG + IFDT G L + ++ + + R+++ ++R++
Sbjct: 199 LDVNVDAVAAYLNAQIEAGAQAVMIFDTWGGTLADGAYQRLSLDPIRRVVAKLKRQHDGE 258
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I+F KG G L+ + +A+GLDW+V L A E + +QGNLDP L
Sbjct: 259 QVPVITFTKGGGLWLEEI-AASGVDAVGLDWTVNLGRARERVNGAVALQGNLDPNILFAP 317
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 318 PATIRMEARAVLDSYGNHPGHVFNLGHGISQFTPPESVAELVDEV 362
>gi|88802330|ref|ZP_01117857.1| uroporphyrinogen decarboxylase [Polaribacter irgensii 23-P]
gi|88781188|gb|EAR12366.1| uroporphyrinogen decarboxylase [Polaribacter irgensii 23-P]
Length = 341
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 200/342 (58%), Gaps = 12/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE++ I+KK+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPEFQVIKKKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ V+ + GP + +PI TQ+ ++ P++ L Y++ +
Sbjct: 67 DAAILFSDILVIPQAMNIEVQMKPDFGPYLPNPIRTQKDLDRVIVPDVHHSLGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I ++KL + I LIGF G+PWT+ Y + G K+ + + + N + LL ++
Sbjct: 124 AIKATKEKLNDDIPLIGFAGSPWTIMCYCVQGQGSKNFDKAKELCFTNPVMAHSLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL A++ AGV+ +QIFD+ G L +++ ++ + + +II A++ + + I+F
Sbjct: 184 DTTIAYLKAKVAAGVNAVQIFDSWGGMLSPVDYKEFSWQYIQQIIDALKDE---TQVIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + + A+G+DW+ A L + +QGN DP RL+ +
Sbjct: 241 GKGCWFALGDMSK-SGAAALGVDWTCSARNARYLSGGKITLQGNFDPSRLLSPPAEIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +++ G +I NLGHGI P + +N V V+ K+
Sbjct: 300 VHQMINEFGKDRYIVNLGHGILPNIPVENAKAFVDAVKEYKV 341
>gi|89257075|ref|YP_514437.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica LVS]
gi|115315431|ref|YP_764154.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica OSU18]
gi|156503285|ref|YP_001429350.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009462|ref|ZP_02274393.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FSC200]
gi|167011117|ref|ZP_02276048.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FSC200]
gi|254368311|ref|ZP_04984329.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica 257]
gi|290954349|ref|ZP_06558970.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312213|ref|ZP_06803013.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica URFT1]
gi|122324583|sp|Q0BK67|DCUP_FRATO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122500219|sp|Q2A1G5|DCUP_FRATH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171769936|sp|A7NEJ1|DCUP_FRATF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89144906|emb|CAJ80251.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica LVS]
gi|115130330|gb|ABI83517.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica OSU18]
gi|134254119|gb|EBA53213.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica 257]
gi|156253888|gb|ABU62394.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 344
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 193/343 (56%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRVKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGAGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A G V QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|187931003|ref|YP_001890987.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238058037|sp|B2SEW4|DCUP_FRATM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187711912|gb|ACD30209.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 344
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 190/339 (56%), Gaps = 9/339 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++RY+
Sbjct: 6 LDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQRYDL 65
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L ++ ++
Sbjct: 66 DAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNAV 125
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ ++ LIGF G+PWT+A+YMI G K + R Y N + + LL L+D+
Sbjct: 126 KTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADI 183
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ YL+ Q+ AG + IFDT G L ++N++ + I V++K N + F K
Sbjct: 184 TIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYKEYIAKNVKQKI-NIPIVFFTK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVN 306
G + + + + +G+DWSV L A G V QGN DP L Q + + V
Sbjct: 243 GGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETVR 301
Query: 307 AILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 302 ANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIR 340
>gi|260770584|ref|ZP_05879516.1| uroporphyrinogen III decarboxylase [Vibrio furnissii CIP 102972]
gi|260614414|gb|EEX39601.1| uroporphyrinogen III decarboxylase [Vibrio furnissii CIP 102972]
gi|315178360|gb|ADT85274.1| uroporphyrinogen decarboxylase [Vibrio furnissii NCTC 11218]
Length = 355
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 191/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 123 Y---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R++
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREHD 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + ++ +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGEKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +ILD G G +FNLGHGI V P+N V V
Sbjct: 299 APEARIREEVASILDGFGHGGTGHVFNLGHGIHLDVPPENAGVFVNAVHE 348
>gi|308182767|ref|YP_003926894.1| uroporphyrinogen decarboxylase [Helicobacter pylori PeCan4]
gi|308064952|gb|ADO06844.1| uroporphyrinogen decarboxylase [Helicobacter pylori PeCan4]
Length = 339
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 187/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|15645229|ref|NP_207399.1| uroporphyrinogen decarboxylase [Helicobacter pylori 26695]
gi|2313724|gb|AAD07669.1| uroporphyrinogen decarboxylase (hemE) [Helicobacter pylori 26695]
Length = 340
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 17 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 76
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 77 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSREK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 134 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 194 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 252
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 253 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVETILKVMGNQGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 311 IFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|254779402|ref|YP_003057507.1| uroporphyrinogen decarboxylase [Helicobacter pylori B38]
gi|254001313|emb|CAX29298.1| Uroporphyrinogen decarboxylase [Helicobacter pylori B38]
Length = 339
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 187/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + ++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYANSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVETILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|114773236|ref|ZP_01450471.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
gi|114546355|gb|EAU49264.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
Length = 355
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 192/346 (55%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 6 KNDRYLRALAKESVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLL-NPNIDLFLNYL 120
RR++ DAAILFSDIL I DA+G + F EGPR + PIT Q++ L NP+ + L Y
Sbjct: 66 RRFDLDAAILFSDILTIPDAMGLGLYFETGEGPRFERPITCAQDVKQLPNPDPEGELQY- 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + A+ + + L
Sbjct: 125 --VMNAVRTIRKGLDGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMAFAEPQTLHLL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D YL AQI AG + IFDT G L +++ ++ + + +I+ + R+
Sbjct: 183 LDKVADSVITYLNAQIKAGAQSVMIFDTWGGVLSPRDYQLFSLQYMHKIVDGLIRENEGR 242
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F K G L+ T +A+GLDW++ ++ A + +QGN+DP L
Sbjct: 243 KVPVTLFTKNGGMWLEAIAD-TGCDAVGLDWTIDIADAKARVGDRVALQGNMDPSMLYAP 301
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 302 APRIEEEVQSILAGFGEGSGHVFNLGHGIHLDVPPENAGVFVEAVH 347
>gi|59891403|ref|NP_001012341.1| uroporphyrinogen decarboxylase [Ovis aries]
gi|75064956|sp|Q8HY31|DCUP_SHEEP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27527067|emb|CAC82649.1| uroporphyrinogen decarboxylase [Ovis aries]
Length = 367
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 186/348 (53%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + L +P + L Y
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A +
Sbjct: 134 ---VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMSQAKRWLYQRPQASHQ 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 191 LLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVSKRVKAGLQE 250
Query: 240 A-----KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
A I FAK + L+ + +GLDW+V A E + K +QGNLDP
Sbjct: 251 AGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCA 309
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 310 LYASEEEIGKLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|8928548|sp|O25325|DCUP_HELPY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 339
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSREK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVETILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|217032026|ref|ZP_03437527.1| hypothetical protein HPB128_187g53 [Helicobacter pylori B128]
gi|298736298|ref|YP_003728824.1| uroporphyrinogen decarboxylase HemE [Helicobacter pylori B8]
gi|216946336|gb|EEC24942.1| hypothetical protein HPB128_187g53 [Helicobacter pylori B128]
gi|298355488|emb|CBI66360.1| uroporphyrinogen decarboxylase (HemE) [Helicobacter pylori B8]
Length = 339
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 187/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|317009381|gb|ADU79961.1| uroporphyrinogen decarboxylase [Helicobacter pylori India7]
Length = 339
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL+ A + L + +QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|293394033|ref|ZP_06638337.1| uroporphyrinogen decarboxylase [Serratia odorifera DSM 4582]
gi|291423473|gb|EFE96698.1| uroporphyrinogen decarboxylase [Serratia odorifera DSM 4582]
Length = 354
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT +++ L +P +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITCRAEVEKLPLFDPEDE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY-----VMNAVRTIRRELKGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ +
Sbjct: 176 QTLHLLLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R++ + F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 236 REHDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTCDIADARRRVGNKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L Q + V IL G G +FNLGHGI V P+N V V +
Sbjct: 295 SMLYAAPQRIEQEVETILAGFGHGEGHVFNLGHGIHQDVPPENAGVFVDAVHA 347
>gi|268678958|ref|YP_003303389.1| uroporphyrinogen decarboxylase [Sulfurospirillum deleyianum DSM
6946]
gi|268616989|gb|ACZ11354.1| uroporphyrinogen decarboxylase [Sulfurospirillum deleyianum DSM
6946]
Length = 340
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 186/325 (57%), Gaps = 6/325 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY ++R + +FL +C P+ E+TLQP+ DAAILFSDILV+
Sbjct: 16 PVWMMRQAGRYLPEYMEVRAQAGDFLSLCKDPQKACEVTLQPVDILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
+G ++F++ EGP + L ++ +N L ++++I ++R KL L
Sbjct: 76 PLEMGMELQFLKGEGPVFSHPIKNQADLDALDVQKAINGLEYVYETIRLIRGKLAADKAL 135
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCGAPWT+A+YMI G K + + Y N + LL +++V Y+ QI +G
Sbjct: 136 IGFCGAPWTLATYMIEGQGTKTYALVKKLIYTNPSFMHALLSKVTEVLKGYMERQIQSGA 195
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRRL 259
DV+ IFD+ A L E + ++ + I + ++ KYP+ I F KG +GY+ K
Sbjct: 196 DVVMIFDSWAAALEESAYFEFSWAYMKEISAYLKGKYPHVPVILFPKGISGYLDKIDGEF 255
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+ G+DWS P+ A E L + +QGN++P RL + + G++ I+ V+ + +
Sbjct: 256 ---DVFGVDWSTPMELAKEKLGHKYVLQGNMEPTRL-YSKEAIDAGISHIVSVMKNERHV 311
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHGI P + +N ++ V+S
Sbjct: 312 FNLGHGILPDIPVENAKYFIQQVQS 336
>gi|163854651|ref|YP_001628949.1| uroporphyrinogen decarboxylase [Bordetella petrii DSM 12804]
gi|229889830|sp|A9HY51|DCUP_BORPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163258379|emb|CAP40678.1| uroporphyrinogen decarboxylase [Bordetella petrii]
Length = 358
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 188/332 (56%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYAAEVTLQPLARYDLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F EGPR P+ T++ L P+++ L Y +F +++++R++L
Sbjct: 84 PHAMGLGLDFAPGEGPRFARPLRTEDDVARLAVPDME-SLRY---VFDAVAVIRRELDGK 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L+ + + +YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMVEGRGSDDYRLIKTMLYARPDLLHRILEVNAQATLQYLNAQIQ 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ ++++ + R++ + I F KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLIREHQGRRVPAIVFTKGGGQWLEA 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+AIGLDW+V L A + + +QGNLDPM L G++ + LD
Sbjct: 260 I-AACGCDAIGLDWTVNLGQARQRTGDAVALQGNLDPMTLFGGSEAIRAEARRTLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G+G +FNLGHGI+ P+ V +LV V +
Sbjct: 319 VGTGGHVFNLGHGISQYTPPEAVAELVDEVHT 350
>gi|213408919|ref|XP_002175230.1| uroporphyrinogen decarboxylase [Schizosaccharomyces japonicus
yFS275]
gi|212003277|gb|EEB08937.1| uroporphyrinogen decarboxylase [Schizosaccharomyces japonicus
yFS275]
Length = 353
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 190/342 (55%), Gaps = 22/342 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGRYLPEY ++R + F MC PE ELT+QP+ R+
Sbjct: 6 LLRAARGEPVERLPVWIMRQAGRYLPEYHKLRAE-STFFQMCQCPETASELTMQPVDRFA 64
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE---IYLLNPNIDLFLNYLL 121
DAAI+FSDILVI ALG +V +E +GP P+ T + NPNI L Y
Sbjct: 65 GLLDAAIIFSDILVIPQALGMHVEMLEGKGPHFPTPLNTPDDLKTLQKNPNISSILGY-- 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +IS+ R +L N + L+GF GAPWT+ +YMI GG K + + + ++ A + LL
Sbjct: 123 -VMDAISLARTRLENRVPLLGFSGAPWTLMAYMIEGGGSKSFAKAKTWLFRYQEASHELL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+ + YL+ Q+ AG ++QIFD+ AG L +F +A + I + V++ +
Sbjct: 182 KLLTKTISVYLVEQVKAGAQMLQIFDSWAGELSPRDFFEFAYPYLVEICNTVKKSLRECR 241
Query: 242 -----FISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV--QGNLDPM 292
I +AKGA Y L +L DS + +GLDW + A+ ++ V QGNLDP
Sbjct: 242 IEPVPMIVYAKGAWYALD---KLCDSGYDVVGLDWLQDPAEAVRIRGNRRVTFQGNLDPS 298
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L ++ + V +++ G +I NLGHGITP V ++V
Sbjct: 299 ILYGSHETIEQRVKEMIEAFGKKDYIINLGHGITPAVKVEDV 340
>gi|322417560|ref|YP_004196783.1| uroporphyrinogen decarboxylase [Geobacter sp. M18]
gi|320123947|gb|ADW11507.1| uroporphyrinogen decarboxylase [Geobacter sp. M18]
Length = 339
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 134/345 (38%), Positives = 189/345 (54%), Gaps = 16/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+
Sbjct: 1 MNTR---FLDACWGKPVDRVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVTI 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ DAAILFSDIL + +G + F GP PI T ++ L P ++ +
Sbjct: 57 QPVDILGVDAAILFSDILTPIEPMGMELDF--TPGPVFTKPIRTMADVEALKIPKMETDV 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 115 PYVL---DAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYAEPEIY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ ++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R
Sbjct: 172 AALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLNRT- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F KGAG ML+ + + +GLDW V L A ++ + VQGNLDP L
Sbjct: 231 -NVPVIHFVKGAGTMLEIVKE-AGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAP 288
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+++ V +LD P IFNLGHGI P V P+N + +V V
Sbjct: 289 KEIIEREVKRVLDENAGRPGLIFNLGHGILPTVPPENAIFMVDCV 333
>gi|254468357|ref|ZP_05081763.1| uroporphyrinogen decarboxylase [beta proteobacterium KB13]
gi|207087167|gb|EDZ64450.1| uroporphyrinogen decarboxylase [beta proteobacterium KB13]
Length = 351
Score = 215 bits (548), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 192/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN L+ L+ + P W+MRQAGRYLPEYR RK +F+D+C + E+T+
Sbjct: 1 MNLLNDSFLKTLRLGKTSYTPAWIMRQAGRYLPEYRDTRKNAGSFMDLCRNTSFATEVTM 60
Query: 61 QPIRRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLN-PNIDLF 116
QP+ RY DAAILFSDIL I DA+G + F+ EGP I ++ L+ P+++
Sbjct: 61 QPLERYPQLDAAILFSDILTIPDAMGLGLNFLPGEGPTFSNPLIDESSVHKLDIPSMEK- 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L+Y +F +I ++ L N + LIGF G+PWT+A+YM+ G D + AY+
Sbjct: 120 LSY---VFDAIRSIKDALQNRVPLIGFAGSPWTLATYMVEGKGGSDFLNVKKMAYERDDL 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-R 235
+ +L ++ ++YL QI AG D + IFD+ G L E+E + + II +
Sbjct: 177 MHHILKINAETVSQYLAEQIKAGADAVMIFDSWGGALSHLEYEKLSLNYMKVIIDNLNIL 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
+ + I F KG G + N + SNAIGLDW L A EL K+ +QGN+DP L
Sbjct: 237 GFGDVPKIIFTKGGGQWI-NQQLKAGSNAIGLDWQTSLKTARELTKDKVALQGNMDPAIL 295
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV---LDLVK 339
+ ++ + V +++D G G IFNLGHGIT DP V LD++K
Sbjct: 296 LGSDKKIEGTVKSVIDDYGHGEGHIFNLGHGITQFTDPAKVTLMLDVLK 344
>gi|282891112|ref|ZP_06299617.1| hypothetical protein pah_c045o148 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499105|gb|EFB41419.1| hypothetical protein pah_c045o148 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 339
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 197/331 (59%), Gaps = 14/331 (4%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+WLMRQAGRY+P+YR +R+K+ +FLDMC+ PE E+TL PI+ + DAAILFSDILV
Sbjct: 18 PPVWLMRQAGRYMPQYRAMREKY-SFLDMCHQPELATEVTLMPIQTFGMDAAILFSDILV 76
Query: 80 IADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL--FLNYLLPIFQSISILRKKLPN 136
I +AL +RF E +GP ++ P+ T E PN+ + L+Y + ++I + L
Sbjct: 77 IPEALRVGLRFEETKGPIIERPLNTLEDIQNLPNVHIPEALSY---VSEAIKTMLPHL-- 131
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGFCGAP+T+ASY+I GG K + + + + +F+ LL+ L+D++ +YL QI
Sbjct: 132 KVPLIGFCGAPFTLASYLIEGGSSKTLKKTKQWMLREPASFHQLLNRLADLTVDYLKLQI 191
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+GV +QIFD+ A LG +F+ ++ + +I+ A+ N I F +G+ +
Sbjct: 192 ESGVKALQIFDSWAHVLGHFQFQEFSLGYLKKIVDALAST--NIPIILFCRGSSVFAPSL 249
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L + AI LDW+ L + L + +QGNLDP L N + V+ +L +
Sbjct: 250 ASLRPA-AISLDWNSDLKAVRQMLPSKIALQGNLDPDILYAPNPTIRQHVSQMLKDMHQD 308
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P +IFNLGHGI P + V LV V++++
Sbjct: 309 PGYIFNLGHGIHPDTPMEAVHTLVDCVQNDR 339
>gi|238025758|ref|YP_002909989.1| uroporphyrinogen decarboxylase [Burkholderia glumae BGR1]
gi|237874952|gb|ACR27285.1| Uroporphyrinogen decarboxylase [Burkholderia glumae BGR1]
Length = 364
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 181/333 (54%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + PEY E+TLQP+ RY DAAILFSDIL I
Sbjct: 23 PIWLMRQAGRYLPEYNATRSRAGSFLGLAKHPEYAAEVTLQPLERYPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + F+ EGP+ P+ T+ L P+I L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLEFLAGEGPKFAHPVRTEADVARLAVPDIGATLGY---VTDAVREIRRALTDA 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + AY +LD D A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMQRILDVNVDAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ + + R+++ + R++ + I F KG G
Sbjct: 200 DAQIQAGAQAVMIFDTWGGALADGAYQRLSLDPIRRVVAQLAREHDGERVPVIIFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ + +A+GLDW+V L A E + +QGNLDP L + A+L
Sbjct: 260 LWLEEIAG-SGVDAVGLDWTVNLGRARERVGGSVALQGNLDPSILFAPPATIRMEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P++V +LV V
Sbjct: 319 DSYGNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|153002426|ref|YP_001368107.1| uroporphyrinogen decarboxylase [Shewanella baltica OS185]
gi|166234286|sp|A6WTA5|DCUP_SHEB8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151367044|gb|ABS10044.1| uroporphyrinogen decarboxylase [Shewanella baltica OS185]
Length = 354
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 190/348 (54%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR + P T + L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A + L
Sbjct: 124 --VMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHML 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ G + IFD+ G L + ++ + +II + R
Sbjct: 182 LDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLHYMQKIIDGLTRFADGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 301 IPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQ 348
>gi|297278556|ref|XP_002808261.1| PREDICTED: LOW QUALITY PROTEIN: uroporphyrinogen decarboxylase-like
[Macaca mulatta]
Length = 367
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 187/345 (54%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPAVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQGQRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D L Q +G++ +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALXXXLXGQAVSGIEALQLFESHAGHLGPQLFNKFALPYIRDVAKRVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELSQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|300313641|ref|YP_003777733.1| uroporphyrinogen decarboxylase [Herbaspirillum seropedicae SmR1]
gi|300076426|gb|ADJ65825.1| uroporphyrinogen decarboxylase protein [Herbaspirillum seropedicae
SmR1]
Length = 364
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 187/331 (56%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R + +F+ + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 30 PMWLMRQAGRYLPEYRATRARAGSFMGLATNPDYATEVTLQPLERYPLDAAILFSDILTV 89
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGP+ P+ + L P++ L+Y +F++++ +R++L
Sbjct: 90 PDAMGLGLYFAEGEGPKFQRPLRDEAAVKALRAPDLGK-LDY---VFKAVTQIRRELDGR 145
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D + Y + +L +D A YL AQI
Sbjct: 146 VPLIGFSGSPWTLACYMVEGGGSDDFRLVKSMLYSRPDLMHHILRTNADAVAAYLNAQID 205
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + IFDT G L + ++ ++ + +++S ++R+ + I F KG G L+
Sbjct: 206 AGAQAVMIFDTWGGALADGVYQQFSLSYMQQVVSQLKREQGGQQVPVIVFTKGGGLWLEQ 265
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG- 313
+ ++A+GLDW+V L A + + + +QGNLDP L G+ + V +L+ G
Sbjct: 266 IAAI-GADAVGLDWTVNLGQARQRVGDKVALQGNLDPNVLFAGDDAIRAEVRKLLESFGR 324
Query: 314 ---SGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHGI+ P+ V LV+ V
Sbjct: 325 PGAGSGHVFNLGHGISQHTPPEAVTTLVQAV 355
>gi|260774611|ref|ZP_05883523.1| uroporphyrinogen III decarboxylase [Vibrio metschnikovii CIP 69.14]
gi|260610405|gb|EEX35612.1| uroporphyrinogen III decarboxylase [Vibrio metschnikovii CIP 69.14]
Length = 354
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR++ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P + L
Sbjct: 65 RRFSLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 123 Y---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPALLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ EYL AQI AG + +FDT G L ++++++ + +I+ + R++
Sbjct: 180 RLLDKLANSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYQSFSLHYMHKIVDGLIREHE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L++ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLESI-AATGCDAIGLDWTINIADAKARVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q + V +IL+ G+G +FNLGHGI V P+N V V
Sbjct: 299 ASPQRIRQEVASILEGFGTGSGHVFNLGHGIHLDVPPENAGVFVDAVHE 347
>gi|317180375|dbj|BAJ58161.1| uroporphyrinogen decarboxylase [Helicobacter pylori F32]
Length = 339
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 183/327 (55%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGVGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRL-YDKSALEEGVERILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|118594239|ref|ZP_01551586.1| Uroporphyrinogen decarboxylase (URO-D) [Methylophilales bacterium
HTCC2181]
gi|118440017|gb|EAV46644.1| Uroporphyrinogen decarboxylase (URO-D) [Methylophilales bacterium
HTCC2181]
Length = 355
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 193/346 (55%), Gaps = 19/346 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN- 67
L+ L+ P+W+MRQAGRYLPEYR+ RK +FLD+C ++ E+TLQP+ RY
Sbjct: 10 LKTLKKESTPYTPVWMMRQAGRYLPEYRKTRKHAGSFLDLCKNADFATEVTLQPLDRYPL 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLN-PNIDLFLNYLLPIF 124
DAAILFSDIL + DA+G + FV+ EGP+ I Q I L+ PN++ L Y +F
Sbjct: 70 LDAAILFSDILTVPDAMGLGLHFVDGEGPKFHYPLIDEQAIQKLDVPNVEEDLGY---VF 126
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISG----GFIKDHGQNRVFAYQNSRAFNWL 180
++ ++ L + LIGF G+PWT+A+YM+ G GF+ + Y +
Sbjct: 127 NAVRSIKTALNGRVPLIGFAGSPWTLATYMVEGQGGTGFL----NIKKMLYSRPDLIQHI 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-RKYPN 239
L ++ + YL QI AG D + IFD+ G L HE+E+++ + IIS + + +
Sbjct: 183 LKVTTESVSIYLAKQIEAGADAVMIFDSWGGALSHHEYESHSLNYMKVIISNLNLMGFED 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F KG G L + + + ++A+G+DW L A ++ + +QGNLDP L+
Sbjct: 243 TPKIIFTKGGGQWL-DLQSQSGADALGIDWQTDLGNARKVVNDKIALQGNLDPAILLSEP 301
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +LD G G IFNLGHGIT P+NV ++ VRS
Sbjct: 302 KAIRSAVRNVLDSYGHGESHIFNLGHGITQFTPPENVECMLDEVRS 347
>gi|329118122|ref|ZP_08246834.1| uroporphyrinogen decarboxylase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465782|gb|EGF12055.1| uroporphyrinogen decarboxylase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 353
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 190/346 (54%), Gaps = 14/346 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAQAGSFLDLCKNTELATEVTVQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLL 121
R++ DAAILFSDIL + DA+G + F E EGP+ + P+ + +I L L Y
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLQNEADIAKLQVPDMARLQY-- 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F ++S +R+ L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 123 -VFDAVSSIRRTLNGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D + YL AQI AG +QIFDT G L + FE ++ R + +I+S ++R+ +
Sbjct: 182 DVNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFEEFSLRYMKQIVSGLKRESEGRR 241
Query: 242 --FISFAKGAGYMLKNYRRLTD--SNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L+ ++ D ++A+GLDW+ + A + + +QGN DP L
Sbjct: 242 VPVILFAKGGGLWLE---KMADAGADALGLDWTCNIGEARRRVGGKMALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + IL GSG +FNLGHGI+ DP++ LV V
Sbjct: 299 TPEAIRAEAGRILADYGSGSGHVFNLGHGISQFADPEHAKILVDAV 344
>gi|254000506|ref|YP_003052569.1| uroporphyrinogen decarboxylase [Methylovorus sp. SIP3-4]
gi|253987185|gb|ACT52042.1| uroporphyrinogen decarboxylase [Methylovorus sp. SIP3-4]
Length = 354
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 187/330 (56%), Gaps = 11/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR RK +FL +C ++ E+T+QP+ RY DAAILFSDIL +
Sbjct: 22 PVWMMRQAGRYLPEYRATRKNAGSFLSLCKNTDFATEVTMQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + FVE EGP+ + P+ I+ L+ P+I L Y + ++S +RK L
Sbjct: 82 PDAMGLGLYFVEGEGPKFERPVRDAAAIHKLHVPDIAADLGY---VTDAVSQIRKTLDGR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A+YM+ G D + AY + LLD ++ YL AQI
Sbjct: 139 VPLIGFSGSPWTLATYMVEGQGGTDFLTIKKMAYAEPALLHHLLDIIAQTVTLYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV--RRKYPNAKFISFAKGAGYMLKN 255
AG + IFD+ G L + + ++ + +I++ + +R I F KG L+
Sbjct: 199 AGAQAVMIFDSWGGALSHNAYREFSLAYMEKIVAGLIKQRDGSPVPSIVFTKGGALWLEA 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ ++A+GLDW+V + A + + + +QGN+DP L+ + + V +IL G
Sbjct: 259 QAAI-GADALGLDWTVDIGEARKRVGGQVALQGNMDPAILLSTPEAIEKEVASILASYGH 317
Query: 315 G-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +FNLGHGIT P+N ++K V++
Sbjct: 318 GHGHVFNLGHGITQHTPPENAEAMIKAVKA 347
>gi|170694324|ref|ZP_02885478.1| uroporphyrinogen decarboxylase [Burkholderia graminis C4D1M]
gi|170140747|gb|EDT08921.1| uroporphyrinogen decarboxylase [Burkholderia graminis C4D1M]
Length = 366
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 125/333 (37%), Positives = 184/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PVWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + FV EGP P+ T++ L P+ID L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIDATLRY---VTDAVREIRRALTDA 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILEINASSVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + ++++ ++R++ K I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQQVVNQLKREHDGEKVPVITFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L T +A+GLDW+V L A E + + +QGN+DP L + A+L
Sbjct: 260 LWLDEIAE-TGVDAVGLDWTVNLRNARERVGGKVALQGNIDPSVLFAPPAAIRMEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 319 DSFGNHPGHVFNLGHGISQFTPPENVAELVDEV 351
>gi|291278740|ref|YP_003495575.1| uroporphyrinogen decarboxylase [Deferribacter desulfuricans SSM1]
gi|290753442|dbj|BAI79819.1| uroporphyrinogen decarboxylase [Deferribacter desulfuricans SSM1]
Length = 336
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 200/347 (57%), Gaps = 28/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+VL G + PPIWLMRQAGRY+ EYR +R K FL++C TPE E+TLQPIR +
Sbjct: 6 LLKVLDGEKVERPPIWLMRQAGRYMKEYRDVRSKV-TFLELCKTPELACEVTLQPIRAFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
DAAI+FSDIL+ + +G + F N P + +PI + +++ L++P DL N+
Sbjct: 65 LDAAIVFSDILIPIEPMGVELDF--NPAPVIANPIRSKTDAEKLTLVDPYKDL--NF--- 117
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +L KL + LIGF GAP+T+A YM+ G K+ + F + + L++
Sbjct: 118 VIETVKLLVSKL--DVPLIGFSGAPFTLACYMVEGKGSKNFDVIKTFMRNDEDGYRILME 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
LSD + +YL AQI G V+QIFDT AG L +++E Y V II+ ++ NAK
Sbjct: 176 KLSDSTIKYLQAQIDNGCPVVQIFDTWAGVLSPYDYEKYVFPYVDYIINNLK----NAKV 231
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVM 301
I FAK + ++L +A+G+DWSV L +A E +QGN+DP L +
Sbjct: 232 IYFAKNGATFFNSLKKLK-CDALGVDWSVNLEDYAKLTDDEFVLQGNMDPTLLFASQDKI 290
Query: 302 IDGVNAIL----DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I+ ++ G IFNLGHGI PQ +NV LVK V+ E
Sbjct: 291 REMTKTIINEGKNIKGH---IFNLGHGILPQTPVENVEFLVKFVKGE 334
>gi|217033551|ref|ZP_03438980.1| hypothetical protein HP9810_905g70 [Helicobacter pylori 98-10]
gi|216944076|gb|EEC23507.1| hypothetical protein HP9810_905g70 [Helicobacter pylori 98-10]
Length = 339
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 185/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPIT-TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ FV +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFVPKKGPHFLETITGLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSFELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASTLEKEAYLEFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRL-YDKSALEEGVEKILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|311259434|ref|XP_003128097.1| PREDICTED: uroporphyrinogen decarboxylase-like [Sus scrofa]
Length = 367
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 185/348 (53%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEVCCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNY 119
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + L +P + L+Y
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELDY 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A +
Sbjct: 134 ---VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSNTMAQAKRWLYQRPQASHQ 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 191 LLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKRVKAGLQE 250
Query: 240 A-----KFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
A I FAK + L+ + +GLDW+V P + K +QGNLDP
Sbjct: 251 AGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARDRVGKTVTLQGNLDPCA 309
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +L G +I NLGHG+ P +DP++V V V
Sbjct: 310 LYASEEEIGQLVQQMLSDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 357
>gi|317179031|dbj|BAJ56819.1| uroporphyrinogen decarboxylase [Helicobacter pylori F30]
Length = 339
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 183/327 (55%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHVPVILFPKGIGTYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRL-YDKSALEEGVERILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|303249816|ref|ZP_07336020.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307251639|ref|ZP_07533544.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651383|gb|EFL81535.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860836|gb|EFM92844.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 354
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI TQ L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKTQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|308063605|gb|ADO05492.1| uroporphyrinogen decarboxylase [Helicobacter pylori Sat464]
Length = 339
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 185/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ R+K +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRQKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|89899631|ref|YP_522102.1| uroporphyrinogen decarboxylase [Rhodoferax ferrireducens T118]
gi|122479905|sp|Q220I2|DCUP_RHOFD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89344368|gb|ABD68571.1| uroporphyrinogen decarboxylase [Rhodoferax ferrireducens T118]
Length = 369
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 19/339 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGR+LPEYR R K +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 31 PIWMMRQAGRFLPEYRATRAKAGSFMGLATNTDYATEVTLQPVERFPIDAAILFSDILTV 90
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGP+ P+ + L P++D L Y +F +++ +RK L
Sbjct: 91 PDAMGLGLSFALGEGPKFAHPVQDEAAVAKLAVPDMDK-LRY---VFDAVTSIRKALNGK 146
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+ YM+ G D+ + Y + +L +D A+YL AQI
Sbjct: 147 VPLIGFSGSPWTLGCYMVEGAGSDDYRLVKTMLYSRPDLMHRILQINADSVAQYLNAQIE 206
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + IFD+ G L + F+ ++ R+++ ++R++ A+ I F KG G LK
Sbjct: 207 AGAQAVMIFDSWGGVLADGAFQEFSLAYTARVLAQLKREHNGARIPRIVFTKGGGMWLKE 266
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVL-- 312
L D + +GLDW+V L+ A + + +QGN+DP L + +LD
Sbjct: 267 M-GLLDCDVLGLDWTVNLAKARAIVGDSKALQGNMDPNVLFASPAQIAAEATRVLDSFGT 325
Query: 313 -----GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G+GP IFNLGHGI+ P++V LV+ V
Sbjct: 326 PYAGEGTGPTHIFNLGHGISQHTPPEHVAALVQAVHEHS 364
>gi|261819579|ref|YP_003257685.1| uroporphyrinogen decarboxylase [Pectobacterium wasabiae WPP163]
gi|261603592|gb|ACX86078.1| uroporphyrinogen decarboxylase [Pectobacterium wasabiae WPP163]
Length = 354
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT+ + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + + L
Sbjct: 124 --VMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L +++ ++ R + +I+ ++R+
Sbjct: 182 LDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLRYMHKIVDGLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYAD 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAEFGQGDGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|58699451|ref|ZP_00374193.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534031|gb|EAL58288.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 301
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT 103
NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ +
Sbjct: 8 NFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVES 67
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+ I+ LPI +I +R +LP +LIGF G PWTVASY+I GG K
Sbjct: 68 PKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTF 124
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
++V + S +++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y
Sbjct: 125 --SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVI 181
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A +
Sbjct: 182 EPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWA-KANLNI 240
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+QGNLDP L I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 241 PLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKS 300
>gi|32267372|ref|NP_861404.1| uroporphyrinogen decarboxylase [Helicobacter hepaticus ATCC 51449]
gi|45476865|sp|Q7VF06|DCUP_HELHP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|32263425|gb|AAP78470.1| uroporphyrinogen decarboxylase [Helicobacter hepaticus ATCC 51449]
Length = 340
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 186/331 (56%), Gaps = 16/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYL EY+Q R K +FL +C E E+TLQP+ + DAAILFSDILV+
Sbjct: 16 PIWLMRQAGRYLSEYKQTRTKAGSFLSLCKNVELATEVTLQPVEILDVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F+ EGP+ + + ++ L L Y ++ ++S +R KLP
Sbjct: 76 PLEMGLPLEFLAGEGPKFNRTISNVSDVVNLQEGAHKRLTY---VYDTLSSIRSKLPKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y+ LL+ LS+ YL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKEPYILKTLLETLSEELKLYLEGQIRA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYR 257
G + +QIFD+ A L + ++ + + I ++ KYP+ + F KG AGY+ K
Sbjct: 193 GANAVQIFDSWASALECEVYFEFSWKYMKDIAQYIKGKYPHIPVMLFPKGIAGYLDK--- 249
Query: 258 RLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
D + G+DW P++ A L + +QGNL+P RL + M G++ IL ++G
Sbjct: 250 --IDGCFDVFGVDWGTPMALAKSYLGTKYVLQGNLEPSRL-YDKESMERGIDEILKIMGK 306
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N + LV+ VR +
Sbjct: 307 EKGHIFNLGHGMLPDLPRENAIALVQMVREK 337
>gi|292397866|gb|ADE27973.1| uroporphyrinogen decarboxylase [Nylanderia nr. pubens LZ-2010]
Length = 356
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 194/352 (55%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G ++ PIW+MRQAGRYLPE++++R + +F +C TPE ++TLQPI
Sbjct: 10 KNDRVLRATRGEPVDRVPIWVMRQAGRYLPEFQEVRAQ-NDFFAVCQTPELACQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLN 118
R++ DA+I+FSDILVI A+G V V GP + DP T + L PN++ L
Sbjct: 69 ERFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLVDP--TDLVRLARPNVEEALK 126
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ +
Sbjct: 127 Y---VRKAITLTRHKLDGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY- 237
LL ++DV +YL+ Q+ AG ++Q+F+++ L + F Y+ + + +I VR++
Sbjct: 184 KLLQMITDVIVDYLVMQVKAGAQLLQVFESNGDYLDDALFTIYSFKYLKQISERVRKQLK 243
Query: 238 ----PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
P I+F KGA LK + IGLDW+V P+ +L + +QGN+DP
Sbjct: 244 EENIPEVPMIAFPKGATMNSLKILAKDKSYEVIGLDWTVDPVEARNQLGPDVTLQGNMDP 303
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +ID + ++ G +I NLGHGI P ++ +K V S
Sbjct: 304 CAMYSSQDEIIDRAHKMVSNFGKTRYIANLGHGILPDTPISSMEAFIKGVHS 355
>gi|209515772|ref|ZP_03264635.1| uroporphyrinogen decarboxylase [Burkholderia sp. H160]
gi|209503799|gb|EEA03792.1| uroporphyrinogen decarboxylase [Burkholderia sp. H160]
Length = 366
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 181/330 (54%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNAARGRAGSFLGLAKNPAFATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLP-- 135
DA+G + FV EGP+ P+ T++ L P+ID L Y+ + I K
Sbjct: 83 PDAMGLGLEFVNGEGPKFARPVRTEDDVARLAVPDIDATLRYVTDAVREIRSALKDAQGR 142
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y +L+ + A YL AQ
Sbjct: 143 QRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLLQRILEINARSVAAYLNAQ 202
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ R + ++S ++R++ K I+F KG G L
Sbjct: 203 IEAGAQAVMIFDTWGGALADGIYQRFSLRYIEEVVSQLKREHDGEKVPVIAFTKGGGLWL 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + +A+GLDW+V L A E + + +QGN+DP L + A+LD
Sbjct: 263 DDI-AASGVDAVGLDWTVNLGRARERVGGKVALQGNIDPSVLFAPPATIRMEARAVLDSF 321
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 322 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 351
>gi|91095059|ref|XP_972457.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Tribolium
castaneum]
Length = 354
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 195/348 (56%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G V + P+W+MRQAGRYLPE+ + RK +F ++C TP+ E+TL PI
Sbjct: 8 KNDRLLRAARGEVPDKLPVWVMRQAGRYLPEFMEFRKD-HSFFEICQTPQLACEVTLMPI 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+RY+ DAAI+FSDILVI ALG V GP + +P+T + + LN + + L
Sbjct: 67 KRYDLDAAIIFSDILVIPQALGMVVEMKAGIGPVLPEPLTLENFHELNKTGAV--DRLKY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I++ R KL + L GF GAPWT+ YMI GG K + + + Y + + LL+
Sbjct: 125 VGEAITLTRHKLDGKVPLFGFSGAPWTLMGYMIEGGGSKTLSKAKKWLYAYPKIAHKLLE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKY 237
L++V +Y++ Q+ AG ++QIFD++A L + + + + +I +VR +K
Sbjct: 185 LLTEVIIDYVVMQVEAGAQILQIFDSNADLLNKELYTKFGLPYLKKIRDSVRLKLNQKKL 244
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLV 295
+ FAKGA Y L L +G+DW++ L K VQGNLDP L
Sbjct: 245 EQVPMVLFAKGAHYCLAEQADL-GYEVLGVDWTLEPQVVRTLLKGKNVTVQGNLDPCALY 303
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +I V+ +++ GS +I NLGHGI P +++ LV+TV +
Sbjct: 304 APKEELIALVHKMVEEFGSQRYIVNLGHGIYPDAPTESLQTLVETVHN 351
>gi|210134806|ref|YP_002301245.1| uroporphyrinogen decarboxylase [Helicobacter pylori P12]
gi|226696377|sp|B6JLI7|DCUP_HELP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|210132774|gb|ACJ07765.1| uroporphyrinogen decarboxylase [Helicobacter pylori P12]
Length = 339
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V GNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLHGNLEPTRLYDKN-ALEEGVEKILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|163754809|ref|ZP_02161931.1| uroporphyrinogen decarboxylase [Kordia algicida OT-1]
gi|161325750|gb|EDP97077.1| uroporphyrinogen decarboxylase [Kordia algicida OT-1]
Length = 340
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 194/343 (56%), Gaps = 17/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLPE+ +I++K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVERPPVWMMRQAGRYLPEFMEIKRKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLPI 123
DAAILFSDILVI A+ V+ N GP + +P+ TQ+ + + +P L+Y +
Sbjct: 67 DAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPVRTQKDVDNVIVADPEA---LDY---V 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++I ++ L + I LIGF G+PWT+ Y + G K+ + + F + N A + LL
Sbjct: 121 YKAIKATKELLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKKFCFTNPVAAHQLLQK 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ P I
Sbjct: 181 ITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSWQYINQIIEALKDDAP---VI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
++ KG + + R +++ A+G+DW+ A L +QGN DP RL +
Sbjct: 238 AYGKGCWFAFQEMAR-SNAAALGVDWTCTARNARYLSGGNITLQGNFDPTRLYSPPAEIK 296
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G +I NLGHGI P + N + V+ K
Sbjct: 297 KMVHQMINEFGKDKYIVNLGHGILPDIPLDNAKAFIDAVKEYK 339
>gi|89093495|ref|ZP_01166443.1| Uroporphyrinogen decarboxylase HemE [Oceanospirillum sp. MED92]
gi|89082185|gb|EAR61409.1| Uroporphyrinogen decarboxylase HemE [Oceanospirillum sp. MED92]
Length = 354
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 180/335 (53%), Gaps = 11/335 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C E E+T+QP+
Sbjct: 5 KNDRFLRALLREPVDATPVWMMRQAGRYLPEYRETRAQAGDFLSLCKNKELACEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
RY+ DAAILFSDIL I DA+G + F EGP+ + E L P+ L+Y
Sbjct: 65 ERYDLDAAILFSDILTIPDAMGLGLYFETGEGPKFKKVIRTERDVAELPVPDAAADLDY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD + Y + L
Sbjct: 124 --VMNAVKEIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKQMMYATPEIMHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL QI +G +QIFDT G L ++ ++ + + +I+ + R+Y
Sbjct: 182 LDKLAQSVTTYLNEQIRSGAQAVQIFDTWGGALSGPCYQEFSLKYMKQIVDGLIREYDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ S+A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 KVPVILFTKNGGQWLESMAE-AGSDALGLDWTTDIGNARARVGDKVALQGNMDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDP 331
+ V IL G GP +FNLGHGI VDP
Sbjct: 301 ASRIEQEVEFILGQFGQGPGHVFNLGHGIHQFVDP 335
>gi|254804659|ref|YP_003082880.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha14]
gi|254668201|emb|CBA04943.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha14]
gi|325203867|gb|ADY99320.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240355]
Length = 354
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 185/344 (53%), Gaps = 6/344 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRLVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHTKILVDTVHE 346
>gi|195381067|ref|XP_002049277.1| uroporphyrinogen decarboxylase [Drosophila virilis]
gi|194144074|gb|EDW60470.1| uroporphyrinogen decarboxylase [Drosophila virilis]
Length = 388
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 193/348 (55%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 43 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 101
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L
Sbjct: 102 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPEDLKRLTP--DGALSRLT 159
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L
Sbjct: 160 YVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPEDTKLFL 219
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+DV +YL Q+ AG ++Q+F++ A L + EF ++A + RI + ++
Sbjct: 220 NLLTDVIVDYLEMQVTAGAQMLQVFESSAEHLSKEEFLLWSAPYLRRIRDDLVDRLTKKV 279
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P I FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP +
Sbjct: 280 IPAVPLIIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAVVGPNITLQGNLDPQSMY 338
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G +I NLGHGITPQ ++ LV+ V +
Sbjct: 339 CEPNELRSLATEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVHN 386
>gi|58696989|ref|ZP_00372469.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58536762|gb|EAL60012.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila simulans]
Length = 296
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT 103
NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ +
Sbjct: 3 NFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVES 62
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+ I+ LPI +I +R +LP +LIGF G PWTVASY+I GG K
Sbjct: 63 PKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTF 119
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
++V + S +++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y
Sbjct: 120 --SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVI 176
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A +
Sbjct: 177 EPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWA-KANLNI 235
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+QGNLDP L I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 236 PLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKS 295
>gi|313202465|ref|YP_004041123.1| uroporphyrinogen decarboxylase [Methylovorus sp. MP688]
gi|312441781|gb|ADQ85887.1| uroporphyrinogen decarboxylase [Methylovorus sp. MP688]
Length = 354
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 186/330 (56%), Gaps = 11/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR RK +FL +C ++ E+T+QP+ RY DAAILFSDIL +
Sbjct: 22 PVWMMRQAGRYLPEYRATRKNAGSFLSLCKNTDFATEVTMQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + FVE EGP+ + P+ I+ L+ P+I L Y + ++S +RK L
Sbjct: 82 PDAMGLGLYFVEGEGPKFERPVRDAAAIHKLHVPDIAADLGY---VTDAVSQIRKTLDGR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A+YM+ G D + AY + LLD + YL AQI
Sbjct: 139 VPLIGFSGSPWTLATYMVEGQGGTDFLTIKKMAYAEPALLHHLLDITAQTVTLYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV--RRKYPNAKFISFAKGAGYMLKN 255
AG + IFD+ G L + + ++ + +I++ + +R I F KG L+
Sbjct: 199 AGAQAVMIFDSWGGALSHNAYREFSLAYMEKIVAGLIKQRDGSPVPSIVFTKGGALWLEA 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ ++A+GLDW+V + A + + + +QGN+DP L+ + + V +IL G
Sbjct: 259 QAAI-GADALGLDWTVDIGEARKRVGGQVALQGNMDPAILLSTPEAIEKEVASILASYGH 317
Query: 315 G-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +FNLGHGIT P+N ++K V++
Sbjct: 318 GHGHVFNLGHGITQHTPPENAEAMIKAVKA 347
>gi|24461655|gb|AAN62224.1|AF440524_11 putative uroporphyrinogen decarboxylase [Pseudomonas aeruginosa]
Length = 353
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 179/342 (52%), Gaps = 5/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+W+MRQAGRYLPEYR R + +FL +C E E+TLQP+
Sbjct: 5 KNDRLLRALLREPVDVTPVWMMRQAGRYLPEYRHTRARAGDFLSLCKNRELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAILFSDIL I DA+G + F E EGPR E + + + + L +
Sbjct: 65 ERYDLDAAILFSDILTIPDAMGLGLYFEEGEGPRFKKTIRTETEVADLTVPDAASDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R L + LIGF G+PWT+A+YM+ GG KD + Y + LLD
Sbjct: 125 LAAVKEIRSALAGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKQMMYATPEVLHALLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
L+ YL QI +GV +QIFDT G L + ++ R + +I+ + R+ +
Sbjct: 185 LAQTVTGYLNEQIRSGVQAVQIFDTWGGVLSGPLYLEFSLRYMKQIVDGLIRESEGRRVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L+ ++A+GLDW+ + A + +QGNLDP L +
Sbjct: 245 VILFTKNGGQWLEAMAE-AGADALGLDWTTNIDDARRRIGDRVALQGNLDPGALYAPTKR 303
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL GSG +FNLGHGI VDP+ V V V
Sbjct: 304 IRAEVADILARFGSGSGHVFNLGHGIHQYVDPEVVKVFVDAV 345
>gi|71899203|ref|ZP_00681366.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|71731061|gb|EAO33129.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
Length = 354
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/352 (37%), Positives = 196/352 (55%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ PI L P+++ L Y
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDLLHQL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L+ ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTDAVISYLAAQRAAGAQALQVFDTWGGILSPRMYRTFSLPYLTRIARELERGTGTE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVV 296
+ + F KG G + ++ + A+G+DW++ L A + G V QGNLDP L
Sbjct: 240 HTPLVLFGKGNGPYIAEL-AMSGTEAVGVDWTIELEDAAR-RSNGQVALQGNLDPATLYG 297
Query: 297 GNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+ P ++P +V LV+ V+
Sbjct: 298 TPNNIAHEVQRTLDSYAAGNGGSREGHVFNLGHGMRPGMNPDHVSALVEAVQ 349
>gi|319944944|ref|ZP_08019206.1| uroporphyrinogen decarboxylase [Lautropia mirabilis ATCC 51599]
gi|319741514|gb|EFV93939.1| uroporphyrinogen decarboxylase [Lautropia mirabilis ATCC 51599]
Length = 369
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 193/362 (53%), Gaps = 27/362 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G V + P+WLMRQAGRYLPEY R + +F+ +C TPE E+TL
Sbjct: 1 MSTKNDTFLRALRGQVTDYTPVWLMRQAGRYLPEYNATRARAGSFMALCKTPELACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFL 117
QP+ R+ DAAILFSDIL I DA+ + F + EGPR + E L P+ L
Sbjct: 61 QPLARFPLDAAILFSDILTIPDAMNLGLSFQQGEGPRFERTIRHEDDVKALFAPDPTQEL 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L ++ +R+ L + LIGF G+PWT+A YM+ G D + YQ
Sbjct: 121 RYVL---DAVRTIRQALDGRVPLIGFAGSPWTLACYMVEGRGGTDFHTIKTMMYQRPDLL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR--R 235
+ +L+ + YL AQI AG + IFDT G L + ++ ++ + RI+S + R
Sbjct: 178 HRVLEINARAVTNYLNAQIEAGAQAVMIFDTWGGILADGPYQRFSLAYMRRILSELTPYR 237
Query: 236 KYPNAK---------FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-- 284
K N K I F KG L+ + ++AIG+DW++ L+ A ++ GP
Sbjct: 238 KERNEKGETVLESVPTILFTKGGAPWLEAL-AASGADAIGIDWTMNLATA--RKRVGPTC 294
Query: 285 -VQGNLDPMRLVVGNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVK 339
+QGNLDPM L+ + + + V LD G+ +FNLGHGI+ P++V LV+
Sbjct: 295 VLQGNLDPMALLTSPEQVREQVVRTLDSYGAANTGRGHVFNLGHGISQFTPPEHVSVLVE 354
Query: 340 TV 341
TV
Sbjct: 355 TV 356
>gi|308184388|ref|YP_003928521.1| uroporphyrinogen decarboxylase [Helicobacter pylori SJM180]
gi|308060308|gb|ADO02204.1| uroporphyrinogen decarboxylase [Helicobacter pylori SJM180]
Length = 339
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 187/327 (57%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ R+K +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRQKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + +L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVEILKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL +G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKVLGDKYVLQGNLEPTRLYDKN-ALEEGVERILKAMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|261867384|ref|YP_003255306.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412716|gb|ACX82087.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 354
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 189/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+Y++ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYIVEGGSSKAFTKIKKMLYAEPHLLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R++
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVIVFDTWGGVLAHRDYPAFSLHYMHKIVDGLIREHEER 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+V ++ A + + +QGNLDP L
Sbjct: 242 RVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAEARRRVGHKVALQGNLDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGI---TPQVDPKNVLDLV 338
+ D V +IL G+G +FNLGHGI P PK ++D V
Sbjct: 301 ANRIEDEVRSILAAFGAGNGHVFNLGHGIHQDVPVESPKRLVDAV 345
>gi|195953573|ref|YP_002121863.1| uroporphyrinogen decarboxylase [Hydrogenobaculum sp. Y04AAS1]
gi|226723875|sp|B4U9S4|DCUP_HYDS0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|195933185|gb|ACG57885.1| uroporphyrinogen decarboxylase [Hydrogenobaculum sp. Y04AAS1]
Length = 347
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 195/336 (58%), Gaps = 8/336 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+ I P+WLMRQAGRYLPEYR IR+K+K+FLD C E ++LQP+
Sbjct: 7 LKSLKKEPIARYPVWLMRQAGRYLPEYRAIRQKYKSFLDFCKNVEDAAIVSLQPVDILGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DA I+FSDILV+ + +G V F EGP +D L + I L+Y +F+ +
Sbjct: 67 DAVIMFSDILVLLEPMGIKVSFEAGEGPVLDH-NFDFKNLKSQGISGDLSY---VFELLK 122
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+L++K P + +IGFCGAP+T+ASY+I +D + +VF Y+N + F+ L++ LS+
Sbjct: 123 VLKEKSP--VPVIGFCGAPFTLASYVIEKESSRDFTKTKVFMYENQKDFHILMEKLSEAL 180
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
EY+ QI +G DVIQIFD+ + L ++ Y II ++++K+PN I F +G
Sbjct: 181 VEYIDHQIKSGADVIQIFDSWSMSLSRFAYKEYVYDYNAFIIKSIKQKHPNTPIIYFFRG 240
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA- 307
+ +++ L ++A+ +DWSV ++ + + QGNL+P L++ + + V
Sbjct: 241 SSSHIEDAVDLG-ADALSVDWSVCINDVCKRYPDLVFQGNLEPQILLLDKENIRKHVEEF 299
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ + F+ NLGHGITP V NV V+ V+
Sbjct: 300 VMCIPRDTAFVVNLGHGITPDVSKDNVKYFVECVKE 335
>gi|71905674|ref|YP_283261.1| uroporphyrinogen decarboxylase HemE [Dechloromonas aromatica RCB]
gi|123747050|sp|Q47K40|DCUP_DECAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71845295|gb|AAZ44791.1| Uroporphyrinogen decarboxylase HemE [Dechloromonas aromatica RCB]
Length = 355
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 182/328 (55%), Gaps = 6/328 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY + RK+ NFL++C +P E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 22 PLWLMRQAGRYLPEYCETRKRAGNFLNLCKSPTMACEVTLQPLARYDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F E EGP+ + +E + N + +L + ++S +R+ L N + L
Sbjct: 82 PDAMGLGLYFAEGEGPKFERPLREEWAINNLTVTDPYEHLGYVMDAVSEIRRALDNSVPL 141
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+P+T+A YM+ G D + Y + +L +D YL AQI +G
Sbjct: 142 IGFSGSPYTLACYMVEGEGSSDFRNIKAMLYNRPDLLHRILSVTADSVIAYLNAQIDSGA 201
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ IFDT G L +E ++ + + RI++ ++++ + I F K G L+
Sbjct: 202 QAVMIFDTWGGSLSNAAYEEFSLQYMRRIVAGLKKEKDGQRIPSIVFTKNGGLWLEKIAD 261
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-- 315
+ +A+GLDW++ + A + + +QGNLDP L +++ +LD G
Sbjct: 262 I-GCDAVGLDWTIDIGEARRRVGDKVALQGNLDPNVLFAQPEIVAAEAKKVLDSFGPANT 320
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI+ P++V LV+ V S
Sbjct: 321 GHVFNLGHGISQFTPPESVTALVEAVHS 348
>gi|301155514|emb|CBW14981.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae T3T1]
Length = 354
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNSDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGP+ PI + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFAHPIENKSAVENLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFNKIKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD ++D YL AQI AG + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 178 LHLLLDKVADSVILYLNAQIKAGAQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ K F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP
Sbjct: 238 HDGRKVPVTLFTKGGGLWLEAMAN-TGCDALGLDWTVNLADAKARVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V +IL G G +FNLGHGI P+ PK +D +
Sbjct: 297 LYAPAERIEQEVRSILADFGQGSGHVFNLGHGIHQDVPESAPKIFVDAI 345
>gi|78043006|ref|YP_359341.1| uroporphyrinogen decarboxylase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576901|sp|Q3AEU3|DCUP_CARHZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77995121|gb|ABB14020.1| uroporphyrinogen decarboxylase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 350
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 191/330 (57%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRY+ EY +IR K+ +FL+MC TPE VE+TLQP+R+ DAAILF+DIL+
Sbjct: 18 PVWLMRQAGRYMAEYMEIRNKY-SFLEMCKTPELAVEVTLQPVRKLGVDAAILFADILLP 76
Query: 81 ADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+ +G RF +EGP ++ P+ T +++ ++ P D+ Y+L ++I ILR++L
Sbjct: 77 LEGMGIGFRFARDEGPVIENPVRTIVDVKKVRVITPEEDV--PYVL---EAIKILRRELA 131
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASY+I GG K++ Q + ++ A++ LL +++ + YL AQ
Sbjct: 132 GKVPLIGFSGAPFTLASYIIEGGGSKNYIQCKRLMWEAPEAWHELLGKIAESTVRYLKAQ 191
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG +Q+FD+ G L ++E Y + ++ I FA AG ML+
Sbjct: 192 IAAGAQAVQVFDSWVGTLSPEDYEKYVLPHSKYVFDNLKET--GVPVIHFANNAGSMLE- 248
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ IGLDW V L A + + + VQGNLDP+ L +V+ V IL G
Sbjct: 249 LVAAAGGDVIGLDWRVSLDRAWQTVGFDRGVQGNLDPVALFAPKEVIRQKVKEILIKAGK 308
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P IFNLGHGI + +N LV+ V
Sbjct: 309 RPGHIFNLGHGIHKETPVENAQYLVEVVHE 338
>gi|261839567|gb|ACX99332.1| uroporphyrinogen decarboxylase [Helicobacter pylori 52]
Length = 339
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 185/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWIMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRL-YDKSALEEGVERILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|261838153|gb|ACX97919.1| uroporphyrinogen decarboxylase [Helicobacter pylori 51]
Length = 340
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 184/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 17 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 76
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 77 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 134 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 194 GANAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPIILFPKGIGAYLDSID- 252
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 253 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRL-YDKSTLEEGVEKILKVMGHQGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 311 IFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|307731455|ref|YP_003908679.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1003]
gi|307585990|gb|ADN59388.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1003]
Length = 366
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 182/333 (54%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PVWLMRQAGRYLPEYNATRSRAGSFLGLAKNPAFATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + FV EGP P+ T++ L P+ID L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIDATLRY---VTDAVREIRRALTDA 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + Y + +L+ ++ A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSADFRIVKSMLYARPDLMHRILEINANAVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + R++ + R+ K I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQRVVDQLTRERDGEKVPVIAFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L T +A+GLDW+V L A EL + +QGN+DP L + A+L
Sbjct: 260 LWLDEIAD-TGVDAVGLDWTVNLRKARELVGGKVALQGNIDPSVLFAPPASIRMEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 319 DSFGNHPGHVFNLGHGISQFTPPENVAELVDEV 351
>gi|317177563|dbj|BAJ55352.1| uroporphyrinogen decarboxylase [Helicobacter pylori F16]
Length = 339
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 185/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKVLLEKLSLELVEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL + +GV IL V+G
Sbjct: 252 -GEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRL-YDKSALEEGVERILKVMGHQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|207092174|ref|ZP_03239961.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPKX_438_AG0C1]
Length = 339
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKTGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A + L + +QGNL+P RL + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLDAAKKILGGKYVLQGNLEPTRL-YDKSALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|332184780|gb|AEE27034.1| Uroporphyrinogen III decarboxylase [Francisella cf. novicida 3523]
Length = 344
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 185/331 (55%), Gaps = 9/331 (2%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
+ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++RY+ DAAI+FSD
Sbjct: 14 LEKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQRYDLDAAIVFSD 73
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
IL I +A+G +++F++ GP PI +Q+ +++ ++ L ++ ++ +
Sbjct: 74 ILTIPEAMGMDLKFIKGTGPVFSAPIQSQKDLDKLKSVEDSIDSLEYVYNAVKTTSSAI- 132
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A+YMI G K + R Y N + + LL L+D++ YL+ Q
Sbjct: 133 -RVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLADITVIYLLEQ 191
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AG + IFDT G L +++++ + + I V++K N + F KG +
Sbjct: 192 VKAGASSLMIFDTWGGILPLQHYKDFSLKYMEYIAKNVKQKI-NVPIVFFTKGGSNFFEE 250
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ + A G+DWSV L A G V QGN DP L + + V A ++ + S
Sbjct: 251 LKDKSCDGA-GVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGTKESIRKTVKANIEFIQS 309
Query: 315 GP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
+I NLGHGI P +DP NV +V +R
Sbjct: 310 DKLNNYIVNLGHGIYPDIDPDNVKVMVDAIR 340
>gi|126305804|ref|XP_001375996.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Monodelphis
domestica]
Length = 388
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 185/343 (53%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L G + P+W MRQAGRYL E+++ R ++F C +PE ELTLQP+RR+
Sbjct: 41 LRAAWGEATDYTPVWCMRQAGRYLKEFQETRAG-QDFFITCRSPETCCELTLQPLRRFPL 99
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNP-NIDLFLNYLLPIF 124
DAAI+FSDILV+ A+G V V +GP P+ ++ L P ++D L Y +F
Sbjct: 100 DAAIIFSDILVVPQAMGMQVAMVPGKGPSFPSPLREEQDLDRLQAPVDVDKELGY---VF 156
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+I++ R +L + LIGF GAPWT+ SYM+ GG Q + + YQ A + LL L
Sbjct: 157 QAITLTRHQLAGRVPLIGFAGAPWTLMSYMVEGGGSNTMAQAKRWLYQWPEASHRLLGLL 216
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRK--YPN 239
+DV YL+ Q+ AG +Q+F++HAG LG F YA R V + + R+
Sbjct: 217 TDVLVPYLVGQVAAGAQALQLFESHAGHLGPELFSEYALPYIRDVAKRVKVGLREAGLEP 276
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I FAK A Y L+ + + +G+DW V + A E + K +QGNLDP L
Sbjct: 277 VPLIIFAKDAHYALEALAQ-SGYEVVGIDWKVNPALARERVGKTVTLQGNLDPCALYASK 335
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +L G I NLGHG+ P +DP +V V+ V
Sbjct: 336 EKIGRVVEQMLAAFGPQRHIANLGHGLYPDMDPAHVEAFVEAV 378
>gi|59800806|ref|YP_207518.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA
1090]
gi|293399490|ref|ZP_06643643.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae F62]
gi|75507415|sp|Q5F9N1|DCUP_NEIG1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|59717701|gb|AAW89106.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA
1090]
gi|291610059|gb|EFF39181.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae F62]
Length = 354
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 185/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRTKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|323527837|ref|YP_004229990.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1001]
gi|323384839|gb|ADX56930.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1001]
Length = 366
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 184/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PVWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN- 136
DA+G + FV EGP P+ T++ L P+I+ L Y + ++ +R+ L +
Sbjct: 83 PDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIEATLGY---VTDAVREIRRALTDA 139
Query: 137 ----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + A YL
Sbjct: 140 QGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDLMHRILEVNASSVAAYL 199
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAG 250
AQI AG + IFDT G L + ++ ++ + ++++ ++R++ K I+F KG G
Sbjct: 200 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQQVVNQLKREHDGEKVPVITFTKGGG 259
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L T +A+GLDW+V L A E + + +QGN+DP L + A+L
Sbjct: 260 LWLDEIAE-TGVDAVGLDWTVNLRKARERVGGKVTLQGNIDPAVLFAPPASIRMEARAVL 318
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 319 DAFGNHPGHVFNLGHGISQFTPPENVAELVDEV 351
>gi|271498810|ref|YP_003331835.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech586]
gi|270342365|gb|ACZ75130.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech586]
Length = 357
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRYN DAAILFSDIL + DA+G + F EGPR P+T L P+ +L L Y
Sbjct: 65 RRYNLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPIPDPELELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + + L
Sbjct: 124 --VMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPHTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L + ++ + +I+ ++R++
Sbjct: 182 LDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGPAYREFSLHYMHKIVDGLQREHDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V AIL G+G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVAAILAGFGTGNGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|303251936|ref|ZP_07338107.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247095|ref|ZP_07529147.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649366|gb|EFL79551.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306856344|gb|EFM88495.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 354
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|297569895|ref|YP_003691239.1| uroporphyrinogen decarboxylase [Desulfurivibrio alkaliphilus AHT2]
gi|296925810|gb|ADH86620.1| uroporphyrinogen decarboxylase [Desulfurivibrio alkaliphilus AHT2]
Length = 345
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 195/338 (57%), Gaps = 10/338 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G ++ P+W+MRQAGRYLPEY +R K+ FLDMC TPE E+T+QP+
Sbjct: 6 LQACRGEPVDYTPVWMMRQAGRYLPEYHTVRSKY-TFLDMCKTPEAAAEVTIQPVDLIGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI +A+G + F EN GP +P+ Q L+ P+ + L Y +
Sbjct: 65 DAAILFSDILVIPEAMGAPLEFHENRGPVFPEPVRDQAAVDRLIVPDPEDKLGY---VMA 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LRK+L N + LIGF GAP+T A+YMI GG K+ + Y + LLD ++
Sbjct: 122 AIRLLRKELANKVPLIGFAGAPFTNATYMIEGGSSKNFFLTKKMMYTAPELYGRLLDKIT 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + YL AQ AG +QIFD+ AG L +F +A V RIISA++ + I F
Sbjct: 182 ESTILYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYVKRIISALKESGVDVPLIYF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
A +L+ + + ++ +GLDW + L A ++ G +QGNLDP L++ + + +
Sbjct: 242 ANNGATLLEQSKTV-GADVLGLDWRINLDEAAKIVGPGIALQGNLDPCALLLPHDKLEER 300
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V IL+ + IFNLGHGI P++ P+ +V V
Sbjct: 301 VARILEQGKAADGHIFNLGHGILPEIPPEQAKFMVDAV 338
>gi|332030423|gb|EGI70111.1| Uroporphyrinogen decarboxylase [Acromyrmex echinatior]
Length = 377
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 191/350 (54%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL+ +G ++ P+W+MRQAGRYLPE++++R + +F +C TPE ++TLQPI
Sbjct: 31 KNDRILKATRGEPVDRIPVWVMRQAGRYLPEFQEVRAQ-HDFFTVCQTPELACQVTLQPI 89
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V GP + P+T L+ PN++ L Y
Sbjct: 90 ERFDLDASIIFSDILVIPQAMGLKVEMAPGVGPVLPQPLTGPNDLSRLIRPNVNETLKY- 148
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 149 --VGDAITLTRHKLNGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDTHTL 206
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YL+ Q+ AG ++Q+F+++ L + F NY+ + + +I VR++
Sbjct: 207 LQMITDVIVDYLVMQVKAGAQLLQVFESNGNYLDDALFTNYSFKYLKQISERVRKQLKEA 266
Query: 238 --PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
P I+F KGA LK IGLDW+V P+ +L +QGN+DP
Sbjct: 267 NIPEVPMIAFPKGATMNSLKILAMDQSYEVIGLDWTVDPIEARKQLGANVTLQGNMDPCA 326
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +ID ++ G +I NLGHGI P ++ +K V S
Sbjct: 327 MYFSQDEIIDRAQKMVSNFGKTRYIANLGHGILPDTPISSMEAFIKGVHS 376
>gi|239998553|ref|ZP_04718477.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|240112471|ref|ZP_04726961.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|240125304|ref|ZP_04738190.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|240127757|ref|ZP_04740418.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|254493274|ref|ZP_05106445.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 1291]
gi|268594411|ref|ZP_06128578.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|268598539|ref|ZP_06132706.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|268683905|ref|ZP_06150767.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|268686148|ref|ZP_06153010.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|226512314|gb|EEH61659.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 1291]
gi|268547800|gb|EEZ43218.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|268582670|gb|EEZ47346.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|268624189|gb|EEZ56589.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|268626432|gb|EEZ58832.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|317163828|gb|ADV07369.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 354
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 185/342 (54%), Gaps = 6/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTV 344
>gi|86141060|ref|ZP_01059619.1| uroporphyrinogen decarboxylase [Leeuwenhoekiella blandensis MED217]
gi|85833002|gb|EAQ51451.1| uroporphyrinogen decarboxylase [Leeuwenhoekiella blandensis MED217]
Length = 343
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 194/341 (56%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLPE+++I+ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVERPPVWMMRQAGRYLPEFQEIKAKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ +V GP + DPI + + ++ P+I+ L Y++
Sbjct: 67 DAAILFSDILVIPQAMNIHVEMKPGIGPWLPDPIRSHKDLERVIVPDINDTLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL + I LIGF G+PWT+ Y + G K+ + F + A + LL ++
Sbjct: 124 AIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDIAKEFCFTQPEAAHALLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + P I+F
Sbjct: 184 DTTILYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKEEIP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + ++A+G+DW+ A L +QGN DP RL +
Sbjct: 241 GKGCWFALGEMAK-SGASALGVDWTCSPRNARYLTGGNITLQGNFDPTRLFSPPAEIKRM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 300 VTEMINAFGKDKYIVNLGHGILPNIPLENAGAFIEAVKEYK 340
>gi|171060194|ref|YP_001792543.1| uroporphyrinogen decarboxylase [Leptothrix cholodnii SP-6]
gi|170777639|gb|ACB35778.1| uroporphyrinogen decarboxylase [Leptothrix cholodnii SP-6]
Length = 356
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 182/343 (53%), Gaps = 10/343 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + PIWLMRQAGRYLPEY R K +F+ + ++ E+TLQP+ RY
Sbjct: 11 LRALRRQPTDHTPIWLMRQAGRYLPEYCATRAKAGSFMGLATNVDFATEVTLQPLERYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNYLLPIFQS 126
DAAILFSDIL + DA+G + F EGPR P+ + D+ L Y +F +
Sbjct: 71 DAAILFSDILTVPDAMGLGLSFAAGEGPRFATPVRDEAAVAALEAPDMAKLQY---VFDA 127
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R+ L + LIGF G+PWT+A YM+ G D+ + YQ + +L +D
Sbjct: 128 VTSIRRALDGRVPLIGFSGSPWTLACYMVEGRGSDDYRLVKTMLYQRPDLMHRMLAVTAD 187
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--IS 244
A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R++ + I
Sbjct: 188 SVAAYLNAQIEAGAQAVMIFDSWGGVLADGAFQTFSLAYTRRVLAQLKREHDGQQIPRIV 247
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F KG G L D++A+GLDW+V L A + + +QGNLDP L + +
Sbjct: 248 FTKGGGLWLDEI-AACDTDAVGLDWTVNLDQARRRVGHKVALQGNLDPNVLFASPEQITR 306
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
A+LD G P IFNLGHGI+ P+ V LV V +
Sbjct: 307 EAQAVLDSFGPHPGHIFNLGHGISQFTPPEAVSVLVDAVHAHS 349
>gi|71281343|ref|YP_267206.1| uroporphyrinogen decarboxylase [Colwellia psychrerythraea 34H]
gi|123634019|sp|Q489Q8|DCUP_COLP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71147083|gb|AAZ27556.1| uroporphyrinogen decarboxylase [Colwellia psychrerythraea 34H]
Length = 355
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 192/353 (54%), Gaps = 17/353 (4%)
Query: 1 MNERKQKI-LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K L L ++ P+W+MRQAGRYLPEYR++RK +F+ +C E E+T
Sbjct: 1 MTELKNDTYLRALLKQPVDYTPVWMMRQAGRYLPEYREVRKNAGDFMSVCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
+QP+RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I + +P +
Sbjct: 61 IQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIAVPDPEDE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ +RK+L + LIGF G+PWT+A+YMI GG K + + +
Sbjct: 121 LGY-----VMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D YL AQI AG + +FDT G L ++ ++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYNEFSLQYMAKIVDGLT 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R + F K G L++ T +A+GLDW++ + A + + +QGN+DP
Sbjct: 236 RHNEGRQVPVTLFTKNGGMWLESI-AATGCDAVGLDWTIDIENAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V+ IL G G +FNLGHGI P V+P + +++V
Sbjct: 295 SMLYAPLPRIEQEVSKILSGFGEGGTGHVFNLGHGIHPDVNPDHAGHFIESVH 347
>gi|186477769|ref|YP_001859239.1| uroporphyrinogen decarboxylase [Burkholderia phymatum STM815]
gi|184194228|gb|ACC72193.1| uroporphyrinogen decarboxylase [Burkholderia phymatum STM815]
Length = 378
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 183/330 (55%), Gaps = 10/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 34 PIWLMRQAGRYLPEYNATRSRAGSFLGLAKNPDYATEVTLQPLERYPLDAAILFSDILTV 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSI--SILRKKLP 135
DA+G + F EGP+ P+ T+E L P+ID L Y+ + I ++ +
Sbjct: 94 PDAMGLGLDFQVGEGPKFAHPVRTEEDVARLTVPDIDATLRYVTDAVRQIRTALTDAQGR 153
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + A YL AQ
Sbjct: 154 QRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYGRPDLMHRILEVNAKAVAAYLNAQ 213
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + IFDT G L + ++ ++ + +++ ++R++ + I+F KG G L
Sbjct: 214 IEAGAQAVMIFDTWGGALADGIYQRFSLHYIQQVVRQLKREHDGNRVPVITFTKGGGLWL 273
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW+V L A E + + +QGN+DP L + A+LD
Sbjct: 274 EEI-AATGVDAVGLDWTVNLGKARERVGGQVALQGNIDPSVLFAPPSTIRIEARAVLDSF 332
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
G+ P +FNLGHGI+ P++V +LV V
Sbjct: 333 GNHPGHVFNLGHGISQFTPPEHVAELVDEV 362
>gi|253686625|ref|YP_003015815.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259645153|sp|C6DHS9|DCUP_PECCP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|251753203|gb|ACT11279.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 354
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT+ + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVNLPIPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + + L
Sbjct: 124 --VMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L +++ ++ R + +I+ ++R+
Sbjct: 182 LDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLRYMHKIVDGLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYAD 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|297379805|gb|ADI34692.1| uroporphyrinogen decarboxylase [Helicobacter pylori v225d]
Length = 339
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+ N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMDLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|313676029|ref|YP_004054025.1| uroporphyrinogen decarboxylase [Marivirga tractuosa DSM 4126]
gi|312942727|gb|ADR21917.1| uroporphyrinogen decarboxylase [Marivirga tractuosa DSM 4126]
Length = 348
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 186/346 (53%), Gaps = 12/346 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + P+WLMRQAGR LPEYR++R F+++ TPE E+T+
Sbjct: 6 MELKNDLLLRAAKGEKVERTPVWLMRQAGRILPEYRKVRASVSGFIELAQTPELAAEVTI 65
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFL 117
QP+ + DAAI+FSDILVI +A+G +E GPR + L N++ L
Sbjct: 66 QPVDILDVDAAIIFSDILVIPEAMGLPYEMIEKRGPRFPETIKSKADVEKLSVANVEESL 125
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+Y + ++I I +K+L + LIGF GAPWT+ +YM+ G K + + Y +
Sbjct: 126 SY---VTKAIQITKKELNGRVPLIGFAGAPWTIFAYMVEGSGSKTFSKAKAMLYTDPELS 182
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++D + YL AQI AG D++Q+FD+ AG L +++ ++ + +I A++
Sbjct: 183 HQLLQKITDSTIAYLKAQIAAGADLVQVFDSWAGILSHQQYKEFSIPYLKKIADAIQ--- 239
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVV 296
N FAK A + +L D IGLDW++ P+ + +QGNLDP L
Sbjct: 240 -NVPKTVFAKDAHAAFSDLSKL-DYQTIGLDWTMNPVEVRDIVGANKTLQGNLDPCVLYA 297
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +L+ G+G I NLGHG+ P ++P +V ++ V+
Sbjct: 298 DKASIRKHTKKMLEEFGAGRHIANLGHGVYPDINPDHVKYFIEAVK 343
>gi|332527649|ref|ZP_08403695.1| uroporphyrinogen decarboxylase [Rubrivivax benzoatilyticus JA2]
gi|332112052|gb|EGJ12028.1| uroporphyrinogen decarboxylase [Rubrivivax benzoatilyticus JA2]
Length = 365
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 183/339 (53%), Gaps = 20/339 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKN-FLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
P+WLMRQAGRYLPEYR R+K N F+ + P+Y E+TLQP+ RY DAAILFSDILV
Sbjct: 23 PLWLMRQAGRYLPEYRATREKAGNSFMGLATNPQYATEVTLQPLDRYALDAAILFSDILV 82
Query: 80 IADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPN 136
+ DA+G + F EGPR P+ + L P++D L Y +F ++++LRK L
Sbjct: 83 VPDAMGLGLSFGAGEGPRFAHPLRDEASVAALQVPDLDK-LRY---VFDTVTMLRKALNG 138
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF G+PWT+ASYM+ G D+ + Y + +LD + YL QI
Sbjct: 139 RVPLIGFSGSPWTLASYMVEGAGSDDYRVVKQMLYARPDLLHRILDVNAQAVTAYLNQQI 198
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLK 254
G + IFD+ G L + F+ ++ R+++ ++R++ + I F KG G L+
Sbjct: 199 ECGAQAVMIFDSWGGVLADGVFQEFSLEYTRRVVAGLKRQHDGQQIPVIVFTKGGGIWLE 258
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ ++ +GLDW+ L A + +QGNLDP L +V+ +LD G
Sbjct: 259 QIAAI-GADVVGLDWTANLGDARRRTGDRVALQGNLDPAVLFSNPEVIAKEAAKVLDSFG 317
Query: 314 S--------GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ G +FNLGHGI+ P NV LV+ V +
Sbjct: 318 APQRADGGWGGHVFNLGHGISQHTPPDNVTALVEAVHNH 356
>gi|322834811|ref|YP_004214838.1| uroporphyrinogen decarboxylase [Rahnella sp. Y9602]
gi|321170012|gb|ADW75711.1| uroporphyrinogen decarboxylase [Rahnella sp. Y9602]
Length = 354
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/351 (36%), Positives = 188/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ ++
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFSSPLTNRADVEKLPVPDPEME 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD ++D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 MHLLLDKVADSVILYLNAQIKAGAQSVMIFDTWGGVLTPRDYREFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVAIQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V IL G G +FNLGHGI V P+N V+ V S
Sbjct: 297 LYASPVRIEQEVETILAGFGKGNGHVFNLGHGIHQDVPPENAGAFVEAVHS 347
>gi|332877606|ref|ZP_08445350.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684455|gb|EGJ57308.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 340
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 188/339 (55%), Gaps = 12/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L VL G PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 8 LRVLNGESTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCKTPELAAEITVQPVDIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V + GP + +PI T + ++ P+I+ L Y+L +
Sbjct: 67 DAAILFSDILVVPQAMNIEVEMKKGVGPWLPNPIRTAKDVAQVIVPDIEETLGYVL---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +++L N + LIGF G+P+T+ Y + G +D + + ++ + LL ++
Sbjct: 124 AVKLTKQRLNNRVPLIGFAGSPFTIFCYAVQGSSSRDFATAKELCFTDAATAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +QIFD+ G L ++ ++ + + +I+ A+ P K I F
Sbjct: 184 DTTILYLKEKVKAGVDAVQIFDSWGGVLSPEDYRTFSWQYINQIVEALA---PLTKVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
KG + L + ++A+G+DW+ A EL V QGN DP RL+ +
Sbjct: 241 GKGCWFALPEMAA-SKASALGIDWTCSPEKARELTGGKIVLQGNFDPSRLLSSPAEIKKK 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++D G +I NLGHGI P V +N + V+ V+
Sbjct: 300 VKEMIDTFGKDKYIANLGHGILPNVPVENAIAFVEAVKE 338
>gi|156935800|ref|YP_001439716.1| uroporphyrinogen decarboxylase [Cronobacter sakazakii ATCC BAA-894]
gi|166234248|sp|A7MJ78|DCUP_ENTS8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|156534054|gb|ABU78880.1| hypothetical protein ESA_03676 [Cronobacter sakazakii ATCC BAA-894]
Length = 354
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 190/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALQRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITGKADVEKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y S+
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAESQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAIAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G+G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIEEEVASILAGFGNGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|293603083|ref|ZP_06685517.1| uroporphyrinogen decarboxylase [Achromobacter piechaudii ATCC
43553]
gi|292818477|gb|EFF77524.1| uroporphyrinogen decarboxylase [Achromobacter piechaudii ATCC
43553]
Length = 357
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 185/330 (56%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEYR R + +F+ + P+Y +E+TLQP+ R++ DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYRATRARAGSFMGLAQNPDYAMEVTLQPLARFDLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F E EGPR P+ ++ L P++D L Y +F ++S++R++L
Sbjct: 84 PHAMGLGLDFAEGEGPRFAHPVRDEQDVARLAVPDMDK-LRY---VFDAVSVIRRELDGK 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ G D+ + Y + +L+ ++ + +YL AQI
Sbjct: 140 VPLIGFAGSPFTIACYMVEGKGSDDYRLIKTMLYSRPDLLHRILEINAEATLQYLNAQIA 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ +++ + R+ + I F KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTKKVVDGLTRENEGRRVPVIVFTKGGGQWLEQ 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+A+GLDW+V L+ A + QGNLDPM L G + +LD
Sbjct: 260 I-AACGCDAVGLDWTVDLAAARRRTGDSVAFQGNLDPMALFGGGPAVRAEARRVLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+G G +FNLGHGI+ P V +LV+ V
Sbjct: 319 VGKGGHVFNLGHGISRFTPPDAVAELVEEV 348
>gi|307256137|ref|ZP_07537924.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865318|gb|EFM97214.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 354
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|297620484|ref|YP_003708621.1| uroporphyrinogen decarboxylase [Waddlia chondrophila WSU 86-1044]
gi|297375785|gb|ADI37615.1| uroporphyrinogen decarboxylase [Waddlia chondrophila WSU 86-1044]
Length = 345
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 195/341 (57%), Gaps = 14/341 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+LE L + PP+W+MRQAGRY+P YR+IR+++ F++MC PE E+T+ PI +
Sbjct: 5 LLEALACENQSRPPVWMMRQAGRYMPSYRKIREQYA-FVEMCRNPEIAAEVTMLPIHEFG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL+I DALG +RF E +GP ++ P+ + E L P ++ L + +
Sbjct: 64 MDAAILFSDILMIPDALGVGLRFEEGKGPIIEKPVKSCEDVAALKKPVVEEALGF---VA 120
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I +L +L + LIGFCGAP+TVASYMI GG +D Q + + Y++ +F+ LL +
Sbjct: 121 DAIRLLCNEL--SVPLIGFCGAPFTVASYMIEGGTSRDFKQTKQWMYRDPESFHALLALI 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + +Y+ Q+ AG IQIFD+ A LG +F+ ++ + I+ + + PN I
Sbjct: 179 AEATIDYVDMQVAAGAQAIQIFDSWAHVLGFRQFKEFSLFYMNAILEGICK--PNPPVII 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ +GA + + AI LDW+ L S + +QGN DP L + +
Sbjct: 237 YCRGASVFAQELANIY-PQAISLDWNAHLPSLRNLIPSRIALQGNFDPDLLYAPFSTIEE 295
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L + P +I NLGHGI P + P+ V V TV++
Sbjct: 296 EVKRMLCEMDGDPGYIVNLGHGIKPDMSPEAVKAFVDTVKA 336
>gi|325579265|ref|ZP_08149221.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae ATCC
33392]
gi|325159500|gb|EGC71634.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae ATCC
33392]
Length = 371
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 18 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNVDLACEVT 77
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGP+ PI + L P+ +
Sbjct: 78 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENKSTVENLPIPDPEGE 137
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 138 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFNKIKKMMYAEPQT 194
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD ++D YL AQI AG + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 195 LHLLLDKVADSVILYLNAQIKAGAQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRE 254
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ K F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP
Sbjct: 255 HDGRKVPVTLFTKGGGLWLEAMAN-TGCDALGLDWTVNLADAKARVGNKVALQGNMDPSV 313
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V +IL G G +FNLGHGI P+ PK +D +
Sbjct: 314 LYAPAERIEQEVRSILADFGQGSGHVFNLGHGIHQDVPESAPKIFVDAI 362
>gi|262273294|ref|ZP_06051109.1| uroporphyrinogen III decarboxylase [Grimontia hollisae CIP 101886]
gi|262222667|gb|EEY73977.1| uroporphyrinogen III decarboxylase [Grimontia hollisae CIP 101886]
Length = 354
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 190/349 (54%), Gaps = 15/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RRY+ DAAILFSDIL + DA+G + F EGP+ + PIT ++I L +P + L
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPKFERPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 123 Y---VMNAVRTIRKGLEGKVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ +++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNDFSLQYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G L+ T + +GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRCVPVTLFTKNGGMWLEKIAA-TGCDGVGLDWTVDMADAKRRIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V IL+ G+G +FNLGHGI V P+N V V
Sbjct: 299 ASPARIRQEVATILEGFGNGSGHVFNLGHGIHLDVPPENAGVFVDAVHE 347
>gi|304399311|ref|ZP_07381176.1| uroporphyrinogen decarboxylase [Pantoea sp. aB]
gi|304353167|gb|EFM17549.1| uroporphyrinogen decarboxylase [Pantoea sp. aB]
Length = 355
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 190/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR +P+T + L P+ ++
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSNPVTCRADVERLPVPDPEME 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGDLPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHAMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIDDARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL+ GSG +FNLGHGI V P+N V+ V
Sbjct: 297 LYAAPERIEQEVAGILERFGSGTGHVFNLGHGIHQDVPPENAGVFVEAV 345
>gi|57242034|ref|ZP_00369974.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis RM3195]
gi|57017226|gb|EAL54007.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis RM3195]
Length = 340
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 184/326 (56%), Gaps = 8/326 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYL EY +RK +FL +C + E++LQP+ DAAI+FSDILV+
Sbjct: 16 PVWMMRQAGRYLSEYMAVRKSAGDFLSLCKDYQKASEVSLQPVDILGVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHI 138
+G +RF + EGP + P+ +E LN DL + L ++ ++S+ R+KL
Sbjct: 76 PLEMGLELRFEKGEGPVFENPLQNKED--LNKLDDLSAIKKLHYVYDALSLTREKLAKDK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+ WT+A+YMI G K++ + + YQN + +L L++V YL QI A
Sbjct: 134 ALIGFCGSAWTIATYMIEGRGSKNYAKCKKMLYQNPELLHQILRKLNEVLKLYLEEQIRA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + +QIFD+ AG L + F ++ + + S +++KYP+ I F KG L
Sbjct: 194 GANAVQIFDSWAGALEKEAFFEFSFSYMCELSSYLKQKYPHIPVIVFPKGVSGFLDKIE- 252
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DWS PL A + L + +QGN++P RL N + GV IL ++
Sbjct: 253 -GEFDVFGVDWSTPLDLARDKLSHKFTLQGNMEPCRLYDKNAIK-KGVEQILQIMQGKAH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P + +N +K V+
Sbjct: 311 IFNLGHGILPDIPVENAKYFIKLVQE 336
>gi|301122853|ref|XP_002909153.1| uroporphyrinogen decarboxylase, putative [Phytophthora infestans
T30-4]
gi|262099915|gb|EEY57967.1| uroporphyrinogen decarboxylase, putative [Phytophthora infestans
T30-4]
Length = 409
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 188/344 (54%), Gaps = 14/344 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ L+G+ P+W MRQAGR+LPE+R++R +F MC PE VE++LQP+RRY+
Sbjct: 64 LIRALRGDRTERVPVWCMRQAGRHLPEFRELRDMGYDFFTMCGVPELAVEVSLQPLRRYH 123
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE---IYLLNPNIDLFLNYLLPI 123
DA I+FSDILVI A+G V V GP + DPI E LNPNI+ L Y+L
Sbjct: 124 MDAVIIFSDILVIPQAMGMEVTMVPKVGPVLPDPIRKPEDIDKLDLNPNIEEKLGYML-- 181
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ R+K+ + LIGF GAP T+ YM+ G + + F YQ+ A + LL
Sbjct: 182 -DALNLARQKINGEVPLIGFVGAPLTLMCYMVEGSGSRTKALLKTFLYQHPEASHKLLQG 240
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDT-HAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++DV +++AQ AG +Q+F+T A L + F + + +I V+ + P+
Sbjct: 241 ITDVCVNFMLAQQRAGAQALQVFETVGAEVLTQDHFYEFVFPYLVQIADRVKAEIPDTPI 300
Query: 243 ISFAKGAGYMLKNYRRL--TDSNAIGLDW-SVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
+ F KG Y Y +L T + IGLDW S P+ + +QGN+D +
Sbjct: 301 VCFCKGTQY---AYEKLVATKYDCIGLDWQSDPVEVRQIARGRVSLQGNMDSSVIYASTD 357
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ D V +L G+ ++ NLGHG P ++P +V +K V+
Sbjct: 358 IIYDEVKKMLKRFGTQKYVANLGHGCFPDMEPAHVDAFIKAVQQ 401
>gi|307171917|gb|EFN63554.1| Uroporphyrinogen decarboxylase [Camponotus floridanus]
Length = 356
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 193/352 (54%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G ++ P+W+MRQAGRYLPE++++R ++ +F +C TPE ++TLQPI
Sbjct: 10 KNDRVLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRARY-DFFAICQTPELACQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLN 118
R++ DA+I+FSDILVI A+G V V GP + DP + L+ PN+ L
Sbjct: 69 ERFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLADP--SDLARLVRPNVQEALG 126
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ +
Sbjct: 127 Y---VGDAITLTRHKLDGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY- 237
LL ++DV +YL+ Q+ AG ++Q+F+++ L + F Y+ + + +I VR++
Sbjct: 184 KLLQMITDVIVDYLVMQVKAGAQLLQVFESNGDYLDDALFTTYSFKYLKQISERVRKQLK 243
Query: 238 ----PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
P I+F KGA LK + IGLDW+V P+ +L + +QGN+DP
Sbjct: 244 EANIPEVPMIAFPKGATVNSLKILAKDKSYEVIGLDWTVDPVEARKQLGPDVTLQGNMDP 303
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L ++D + ++ G +I NLGHGI P ++ +K V S
Sbjct: 304 CALYSPQDKIVDRAHKMISNFGKTRYIANLGHGILPDTPILSMEAFIKGVHS 355
>gi|298368861|ref|ZP_06980179.1| uroporphyrinogen decarboxylase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282864|gb|EFI24351.1| uroporphyrinogen decarboxylase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 353
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPVWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTVQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL + DA+G + F E EGP+ E L P++D L Y
Sbjct: 65 ERFELDAAILFSDILTVPDAMGLGLYFAEGEGPKFTRPLQHERDIAALQVPDMDR-LQY- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +
Sbjct: 123 --VFDAVASIRKALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRTVKTMMYSRPDLLHKI 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD + YL AQI AG +QIFDT G L + F+ ++ R + +I+ ++R+
Sbjct: 181 LDVNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFQEFSLRYMRQIVGGLKRENEGR 240
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I FAKG G L+ + ++A+GLDW+ + A + + +QGN DP L
Sbjct: 241 RVPVIIFAKGGGLWLEQMADI-GADALGLDWTCNIGEARRRVGDKVALQGNFDPFALFGT 299
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL G+G +FNLGHGI+ +P++ LV +V
Sbjct: 300 PESIKTEVARILAGFGNGSGHVFNLGHGISQHTNPEHAGILVDSVHE 346
>gi|241767312|ref|ZP_04765038.1| uroporphyrinogen decarboxylase [Acidovorax delafieldii 2AN]
gi|241361989|gb|EER58160.1| uroporphyrinogen decarboxylase [Acidovorax delafieldii 2AN]
Length = 371
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 186/346 (53%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 26 PLWLMRQAGRYLPEYKATRAQAGSFMGLAMNVDYATEVTLQPLERFPLDAAILFSDILTV 85
Query: 81 ADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR E L P++D L Y +F +++ +RK L
Sbjct: 86 PDAMGLGLSFAEGEGPRFAQSVRTEADVAQLAAPDLDK-LRY---VFDAVTSIRKALNGR 141
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 142 VPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAVNADAVASYLNAQID 201
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + IFD+ G L + F+ ++ R+++ ++R + + I F KG G L
Sbjct: 202 AGAQAVMIFDSWGGVLADGAFQQFSLEYTRRVLAQLKRTGVDGQDVPRIVFTKGGGIWLD 261
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + Q GP +QGN+DP L ++ V+A+
Sbjct: 262 DMKDI-DCEVLGLDWTANLGKARAIVGGQVGGPGKALQGNIDPNVLFAPPAQIVTQVHAV 320
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V S
Sbjct: 321 LDSFGKPHTDRTTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSHS 366
>gi|308061937|gb|ADO03825.1| uroporphyrinogen decarboxylase [Helicobacter pylori Cuz20]
Length = 339
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 184/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ R+K +FL +C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRQKAGSFLGLCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP T + + I + LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKIGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYVHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL V+G+
Sbjct: 252 -GEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKVMGNQGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|222112303|ref|YP_002554567.1| uroporphyrinogen decarboxylase [Acidovorax ebreus TPSY]
gi|254767692|sp|B9MGH2|DCUP_ACIET RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221731747|gb|ACM34567.1| uroporphyrinogen decarboxylase [Acidovorax ebreus TPSY]
Length = 370
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 186/342 (54%), Gaps = 26/342 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + EY E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRAKAGSFMGLATNVEYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR E L P++D L Y +F +++ +R+ L
Sbjct: 84 PDAMGLGLSFAEGEGPRFAKAVRDEADVAALAVPDLDK-LRY---VFDAVTSIRRALNGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAVNADAVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F++++ R+++ ++R + + I F KG G L
Sbjct: 200 AGAQAVMVFDSWGGVLADGCFQDFSLEYTRRVLAQLKRTGVDGQDVPRIVFTKGGGIWLD 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + Q GP +QGN+DP L + ++ V A+
Sbjct: 260 DMKDI-DCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNVLFAPSAQIVTQVRAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 319 LDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVEAV 360
>gi|290476987|ref|YP_003469898.1| uroporphyrinogen decarboxylase [Xenorhabdus bovienii SS-2004]
gi|289176331|emb|CBJ83136.1| uroporphyrinogen decarboxylase [Xenorhabdus bovienii SS-2004]
Length = 354
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 194/355 (54%), Gaps = 14/355 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R++ +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRQEAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI T L P+ ++
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHSPILNHTDVEKLPVPDPEME 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY---VMDAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKSMMYAQPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L++ YL AQI AG + IFDT G L ++ ++ + + +I+ + R+
Sbjct: 178 LHLLLDKLANSVILYLNAQIKAGAQSVMIFDTWGGVLSHRDYREFSLQYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ + F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 HDGRRVPVTLFTKGGGQWLEAM-VATGCDALGLDWTTNIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR--SEK 345
L + + V+ IL G+G +FNLGHGI V P++ V+ V SEK
Sbjct: 297 LYAAPARIEEEVSTILQDFGTGNGHVFNLGHGIHQDVPPEHAGAFVEAVHRLSEK 351
>gi|15603599|ref|NP_246673.1| UroD [Pasteurella multocida subsp. multocida str. Pm70]
gi|13431433|sp|P57964|DCUP_PASMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|12722148|gb|AAK03818.1| UroD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 354
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 184/333 (55%), Gaps = 11/333 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYRATRAVAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP+ PI TQ L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLSFGVGEGPKFAHPIETQRAVQNLPIPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYADPQLLHQL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G LG E+ +++ + +I++ + R+
Sbjct: 182 LDKLADAVILYLNAQIKAGAQSVMIFDTWGGVLGHREYLDFSLHYMHKIVAGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+G+DW+V L+ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGMWLEAMAE-TGCDALGVDWTVNLAQAKARVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQV 329
+ V +IL G G +FNLGHGI V
Sbjct: 301 PARIEQEVRSILADFGEGSGHVFNLGHGIHQDV 333
>gi|194098096|ref|YP_002001144.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae NCCP11945]
gi|240013678|ref|ZP_04720591.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI18]
gi|240016117|ref|ZP_04722657.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA6140]
gi|240080258|ref|ZP_04724801.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|240115211|ref|ZP_04729273.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|240117497|ref|ZP_04731559.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|240120747|ref|ZP_04733709.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID24-1]
gi|240123051|ref|ZP_04736007.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|260440971|ref|ZP_05794787.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
gi|268596408|ref|ZP_06130575.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|268600891|ref|ZP_06135058.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|268603197|ref|ZP_06137364.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|268681678|ref|ZP_06148540.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|291044299|ref|ZP_06570008.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
gi|238056489|sp|B4RK59|DCUP_NEIG2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193933386|gb|ACF29210.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae
NCCP11945]
gi|268550196|gb|EEZ45215.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|268585022|gb|EEZ49698.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|268587328|gb|EEZ52004.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|268621962|gb|EEZ54362.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|291011193|gb|EFE03189.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
Length = 354
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 185/343 (53%), Gaps = 6/343 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFAHALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+ +
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMVQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTVH 345
>gi|294053799|ref|YP_003547457.1| uroporphyrinogen decarboxylase [Coraliomargarita akajimensis DSM
45221]
gi|293613132|gb|ADE53287.1| uroporphyrinogen decarboxylase [Coraliomargarita akajimensis DSM
45221]
Length = 344
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 197/351 (56%), Gaps = 15/351 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +Q+ L ++ PPIWLMRQAGRYLPEYR+++ + +F+ M TPE E+TL
Sbjct: 1 MMTSRQRFLAAAACQPVDRPPIWLMRQAGRYLPEYRELKAQ-HDFVTMVRTPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLN 118
QP++R+ DAAI+FSDILVI +ALG+ F + G MD + T ++I L+ +
Sbjct: 60 QPLKRFPLDAAIIFSDILVIPEALGQGYHFRDQGGIGMDYLLDTAEKIEALDA--EKVTE 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ + + K+ L+GFCG+PWT+A YM+ GG KD + A+ F
Sbjct: 118 RLAYVASALELTKFKMDGDKALLGFCGSPWTLACYMVEGGSAKDFIAIKRMAWDQPELFE 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L+ +YL QI AG D +QIFD+ +E ++ R + II+A++ + P
Sbjct: 178 KLMQKLTHAIIDYLHMQIDAGADALQIFDSWGSICPAIHYEAWSLRWIHDIINALKGRVP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLV 295
I +AKG G+ + R T ++ + LDW++ + ++ GP VQGNLDP+ L
Sbjct: 238 ---VILYAKGMGHKSPDLLR-TGASILSLDWTLNMRRMRKVL--GPHVTVQGNLDPVTLT 291
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+++ ++D +G P FIFNLGHG+ P + V L++ V +K
Sbjct: 292 TTPEIVRKEAMRLIDDIGRQPGFIFNLGHGMLPSAKIECVEALMEVVTGQK 342
>gi|242309284|ref|ZP_04808439.1| uroporphyrinogen decarboxylase [Helicobacter pullorum MIT 98-5489]
gi|239524325|gb|EEQ64191.1| uroporphyrinogen decarboxylase [Helicobacter pullorum MIT 98-5489]
Length = 339
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 185/326 (56%), Gaps = 11/326 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYL EYR++R + +FL +C P+ E+TLQP+ + DAAILFSDILV+
Sbjct: 16 PVWFMRQAGRYLQEYREVRAQAGDFLSLCKNPKLASEVTLQPVDILDVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMDP-ITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F EGP+ I TQ ++ L + L Y ++ +IS+ R+KL
Sbjct: 76 PMEMGMELGFFAGEGPKFAKRIETQNDLKGLREDSHKSLQY---VYDTISLTREKLHKDK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+A+YM+ G K + Q + Y N + LL+ ++ YL QI A
Sbjct: 133 ALIGFCGAPWTLATYMVEGEGSKTYQQTKKILYSNPAFLHSLLELIAHNLENYLEEQIKA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYR 257
GV+ + IFD+ A L E + + +I S ++ KYP+ I F KG +GY+ R
Sbjct: 193 GVNAVMIFDSWAAALEEEAYLEFGFAYCKKIASKIKAKYPHIPVILFPKGISGYL---DR 249
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ + G+DWS PL A E L K+ +QGNL+P R + MI G ILD++
Sbjct: 250 IDGEFDVFGVDWSTPLRIAKEKLGKKYVLQGNLEPCR-IYDEDSMIKGAKEILDLMQGER 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHG+ P + +N + LVK +
Sbjct: 309 HIFNLGHGMLPDLPRENAIKLVKFIH 334
>gi|302877421|ref|YP_003845985.1| uroporphyrinogen decarboxylase [Gallionella capsiferriformans ES-2]
gi|302580210|gb|ADL54221.1| uroporphyrinogen decarboxylase [Gallionella capsiferriformans ES-2]
Length = 354
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 181/331 (54%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGR+LPEYR R + +FL +C P++ E+T+QP+ RY DAAILFSDIL +
Sbjct: 23 PLWMMRQAGRFLPEYRATRARAGSFLGLCKNPDFATEVTMQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F + EGP+ + E ++ P+ID L Y + ++S +RK L
Sbjct: 83 PDAMGLGLYFADGEGPKFERPLRDEAAIMALQVPDIDKTLRY---VTDAVSQIRKTLDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T++ YM+ GG D+ + + Y + + +L+ + YL AQI
Sbjct: 140 VPLIGFSGSPFTLSCYMVEGGGSDDYARVKTLMYNEPKLMHHILEVTTQAVIAYLNAQIE 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + IFD+ G L + ++ RI+ + ++ + + F KG G + +
Sbjct: 200 AGAQAVMIFDSWGGVLSHSAYHEFSLPYTQRIVEGLIKEKDGVRIPNVVFTKGGGLWIDS 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
T +AIGLDW++ + A QK G +QGNLDP L + + V +L
Sbjct: 260 I-AATGCDAIGLDWTMDIGVA--RQKVGNKVALQGNLDPAVLFANPNAIRNEVEKVLSSY 316
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G G +FNLGHGI+ +P++V +V V
Sbjct: 317 GYGSGHVFNLGHGISQHTNPEHVAAMVAAVH 347
>gi|308188917|ref|YP_003933048.1| uroporphyrinogen decarboxylase [Pantoea vagans C9-1]
gi|308059427|gb|ADO11599.1| uroporphyrinogen decarboxylase [Pantoea vagans C9-1]
Length = 355
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 189/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR +P+T + L P+ ++
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSNPVTCRADVERLPVPDPEME 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGDLPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHAMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIDDARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL+ GSG +FNLGHGI V P+N V V
Sbjct: 297 LYAAPERIEQEVAGILERFGSGTGHVFNLGHGIHQDVPPENAGVFVDAV 345
>gi|149369454|ref|ZP_01889306.1| Uroporphyrinogen-III decarboxylase [unidentified eubacterium SCB49]
gi|149356881|gb|EDM45436.1| Uroporphyrinogen-III decarboxylase [unidentified eubacterium SCB49]
Length = 343
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 193/341 (56%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPIRRY
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPIRRYGM 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ +V GP + +PI T + ++ P+I L Y++ +
Sbjct: 67 DAAILFSDILVIPQAMNIHVEMKPGIGPWLPNPIRTHKDLDSVIVPDIHDTLGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A + LL ++
Sbjct: 124 AIKMTKEKLNDDIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPVAAHELLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ P I+F
Sbjct: 184 DTTILYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYMQQIIDALKDDAP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + A+G+DW+ A L +QGN DP RL +
Sbjct: 241 GKGCWFALDTMAK-SGAAALGVDWTCSARNARYLTGGNITLQGNFDPTRLFSPPSEIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 300 VKQMIDDFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 340
>gi|189426294|ref|YP_001953471.1| uroporphyrinogen decarboxylase [Geobacter lovleyi SZ]
gi|238058038|sp|B3EAR8|DCUP_GEOLS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189422553|gb|ACD96951.1| uroporphyrinogen decarboxylase [Geobacter lovleyi SZ]
Length = 340
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 188/347 (54%), Gaps = 17/347 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R L+ G ++ P+WLMRQAGRYLPEY +R + +FL++C TPE E+T+
Sbjct: 1 MNNR---FLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSRC-SFLELCKTPELAAEVTI 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVEN---EGPRMDPITTQEIYLLNPNIDLFL 117
QP+ DAAILFSDIL + +G + FV E P +++ + +P D+
Sbjct: 57 QPVDILGVDAAILFSDILTPVEPMGLKLDFVPGPVFENPVRTMADVEKLRIPDPEADV-- 114
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+L Q+I ILRK+L + LIGF GAP+T+A YM+ G KD + Y +
Sbjct: 115 PYVL---QAIRILRKELAGKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPDVY 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ ++ + EYL AQI AG IQIFDT G L ++E Y ++I+ + RK
Sbjct: 172 AALMEKVTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLINGLNRK- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG+G ML ++ + +GLDW + L A + L E VQGNLDP L
Sbjct: 231 -ETPVIHFVKGSGTMLPVVQK-AGGDVMGLDWHINLGSARDILGPEMAVQGNLDPTTLYA 288
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ V +L+ P IFNLGHGI P V P+N +V V
Sbjct: 289 PHAVIEQEVKRVLNENAGRPGHIFNLGHGILPTVPPENAKFMVDCVH 335
>gi|312794898|ref|YP_004027820.1| Uroporphyrinogen decarboxylase [Burkholderia rhizoxinica HKI 454]
gi|312166673|emb|CBW73676.1| Uroporphyrinogen decarboxylase (EC 4.1.1.37) [Burkholderia
rhizoxinica HKI 454]
Length = 384
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 185/333 (55%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+ RY DAAILFSDIL I
Sbjct: 45 PIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLDRYVLDAAILFSDILTI 104
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F EGPR P+ T+ L P ID L Y + +++ +R+ L
Sbjct: 105 PDAMGLGLEFTPGEGPRFAHPVRTEADVARLAVPGIDATLRY---VTDAVAQIRRALVGA 161
Query: 135 --PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + A+YL
Sbjct: 162 DGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEVNARAVADYL 221
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAG 250
AQI AG + IFDT G L E +++++ + + ++++A++R++ I+F KG G
Sbjct: 222 NAQIDAGAQAVMIFDTWGGVLAERIYQSFSLQYMSQVVAALKREHDGEPVPVIAFTKGGG 281
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ + +A+GLDW+V L+ A + +QGNLDP L +V+ +L
Sbjct: 282 QWLEAI-AASGVDAVGLDWTVDLARARARVGGRVALQGNLDPNVLFAPPEVIRAQARQVL 340
Query: 310 DVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
D G+ P IFNLGHGI+ + V +LV V
Sbjct: 341 DAYGNHPGHIFNLGHGISQFTPVQAVTELVDEV 373
>gi|320539741|ref|ZP_08039404.1| uroporphyrinogen decarboxylase [Serratia symbiotica str. Tucson]
gi|320030206|gb|EFW12222.1| uroporphyrinogen decarboxylase [Serratia symbiotica str. Tucson]
Length = 354
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 188/355 (52%), Gaps = 16/355 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLCQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-----EIYLLNPNID 114
LQP+RRY DAAILFSDIL I DA+G + F EGPR ++ L +P ++
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSTIASRADVDKLPLFDPEVE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y++ ++IS ++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LGYVMNAVRTIS---RELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ +
Sbjct: 176 ATLHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLL 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 236 RENDGRRVPVTLFTKGGGQWLEAMAS-TGCDALGLDWATDIADARRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V IL G G +FNLGHGI V P N V+ V ++
Sbjct: 295 SMLYATPERIGQEVETILAGFGHGEGHVFNLGHGIHQDVPPANAGAFVEAVHAQS 349
>gi|699194|gb|AAA62959.1| hemE [Mycobacterium leprae]
Length = 382
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 194/339 (57%), Gaps = 23/339 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ PE E+TLQP+RRY+ DAAILFSDI+V
Sbjct: 50 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPEVACEITLQPLRRYDVDAAILFSDIVVP 108
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T +I+ + P L + PIFQ+IS+L L +
Sbjct: 109 LCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKP---LEPQAIQPIFQAISLLVAAL-GDV 164
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + +++ L+D L+D++ +L+ QI A
Sbjct: 165 PLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDLTLGFLLGQIDA 224
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y RI + V P F + A G M +
Sbjct: 225 GVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVAEHGVPMTHFGVGTADLLGAMSAAV 284
Query: 254 KNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVG--------NQVMIDG 304
++ + +G+DW L+ A ++ +QGNLDP+ L+ G V+ DG
Sbjct: 285 RSGEKPGHQAVVGVDWRTSLTDAAARVEPCTALQGNLDPVVLLAGWPAVERVARTVVDDG 344
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A+ V G+ +FNLGHG+ P+ DP + +LV + S
Sbjct: 345 RRAV--VAGAAGHVFNLGHGVLPETDPGVLSELVSFIHS 381
>gi|73977150|ref|XP_532602.2| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 1 [Canis familiaris]
Length = 364
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 183/345 (53%), Gaps = 12/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
L+D YL+ Q+ AG Q+F++HAG LG F +A V + V+ + A
Sbjct: 194 ILTDALVPYLVGQVAAGA---QLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGL 250
Query: 241 ---KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 251 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 309
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 310 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 354
>gi|315638245|ref|ZP_07893427.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis JV21]
gi|315481781|gb|EFU72403.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis JV21]
Length = 340
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 185/329 (56%), Gaps = 8/329 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYL EY +RK +FL +C + E++LQP+ DAAI+FSDILV+
Sbjct: 16 PVWMMRQAGRYLSEYMAVRKSAGDFLSLCKDYQKASEVSLQPVDILGVDAAIIFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHI 138
+G +RF + EGP + P+ +E L+ DL + L ++ ++S+ R+KL
Sbjct: 76 PLEMGLELRFEKGEGPVFENPLQNKED--LDKLDDLSAVKKLHYVYDALSLTREKLAKDK 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+ WT+A+YMI G K++ + + YQN + +L L++V YL QI A
Sbjct: 134 ALIGFCGSAWTIATYMIEGRGSKNYAKCKKMLYQNPELLHQILRKLNEVLKLYLEEQIRA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G + +QIFD+ AG L + F ++ + + S +++KYP+ I F KG L
Sbjct: 194 GANAVQIFDSWAGALEKEAFFEFSFSYMCELSSYLKQKYPHIPVIVFPKGVSGFLDKIE- 252
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DWS PL A + L + +QGN++P RL N + GV IL ++
Sbjct: 253 -GEFDVFGVDWSTPLDLARDKLSHKFTLQGNMEPCRLYDKNAIK-KGVEQILQIMQDKSH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IFNLGHGI P + +N +K V+ +
Sbjct: 311 IFNLGHGILPDIPVENAKYFIKLVQESSV 339
>gi|15827506|ref|NP_301769.1| uroporphyrinogen decarboxylase [Mycobacterium leprae TN]
gi|221229983|ref|YP_002503399.1| uroporphyrinogen decarboxylase [Mycobacterium leprae Br4923]
gi|8928559|sp|P46809|DCUP_MYCLE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767699|sp|B8ZQX2|DCUP_MYCLB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13093056|emb|CAC31424.1| uroporphyrinogen decarboxylase [Mycobacterium leprae]
gi|219933090|emb|CAR71138.1| uroporphyrinogen decarboxylase [Mycobacterium leprae Br4923]
Length = 357
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 194/339 (57%), Gaps = 23/339 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ PE E+TLQP+RRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPEVACEITLQPLRRYDVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T +I+ + P L + PIFQ+IS+L L +
Sbjct: 84 LCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKP---LEPQAIQPIFQAISLLVAAL-GDV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + +++ L+D L+D++ +L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEPASWHTLMDKLTDLTLGFLLGQIDA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y RI + V P F + A G M +
Sbjct: 200 GVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVAEHGVPMTHFGVGTADLLGAMSAAV 259
Query: 254 KNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVG--------NQVMIDG 304
++ + +G+DW L+ A ++ +QGNLDP+ L+ G V+ DG
Sbjct: 260 RSGEKPGHQAVVGVDWRTSLTDAAARVEPCTALQGNLDPVVLLAGWPAVERVARTVVDDG 319
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A+ V G+ +FNLGHG+ P+ DP + +LV + S
Sbjct: 320 RRAV--VAGAAGHVFNLGHGVLPETDPGVLSELVSFIHS 356
>gi|50119196|ref|YP_048363.1| uroporphyrinogen decarboxylase [Pectobacterium atrosepticum
SCRI1043]
gi|81693466|sp|Q6DAL7|DCUP_ERWCT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49609722|emb|CAG73155.1| uroporphyrinogen decarboxylase [Pectobacterium atrosepticum
SCRI1043]
Length = 354
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT+ + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + + L
Sbjct: 124 --VMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L +++ ++ + +I+ +++R+
Sbjct: 182 LDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDSLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYAD 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|114321912|ref|YP_743595.1| uroporphyrinogen decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310686|sp|Q0A4Y2|DCUP_ALHEH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114228306|gb|ABI58105.1| uroporphyrinogen decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
Length = 365
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 195/345 (56%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L LQ ++ P+W+MRQAGRYLPEYR++R + +F+ + TPE E+TLQP+
Sbjct: 5 KNDRLLRALQRQPVDRTPVWMMRQAGRYLPEYRELRAQAGSFMKLAGTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G +RF+ EGP D P+ + +L P+ + L Y
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFLPGEGPVFDHPVRSAADIEHLPVPDPEDELRY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A+YMI GG KD+ + + Y + L
Sbjct: 124 --VTDAVRLIRRELDGEVPLIGFAGSPWTLATYMIEGGSSKDYRRCKAMLYDEPELLHRL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
LD ++ + YL AQI AG I IFD+ G L + ++ + RI+ + R+
Sbjct: 182 LDKVAQATTAYLNAQIAAGAQAIMIFDSWGGALAHDAYRLFSLAYMERIVRNLTREADGR 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ + F KG G L+ T + +GLDW+ L A + + +QGNLDP L
Sbjct: 242 HVPVVLFTKGGGQWLEAM-AATGCDGLGLDWTTNLGQARDRVGDRVALQGNLDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V +L G GP +FNLGHGI P + P++ ++ V
Sbjct: 301 PETIRNEVARVLADYGPGPGHVFNLGHGIHPAIPPEHAGAMIDAV 345
>gi|109947902|ref|YP_665130.1| uroporphyrinogen decarboxylase [Helicobacter acinonychis str.
Sheeba]
gi|123362546|sp|Q17W45|DCUP_HELAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109715123|emb|CAK00131.1| uroporphyrinogen decarboxylase [Helicobacter acinonychis str.
Sheeba]
Length = 339
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G ++ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLDLEFIPKKGPHFLETITDLKSVDSLKVGAYKRLNY---VYDTISQTRQKLSKDK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI K + +++ Y + LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIESEGSKSYAKSKKMLYSEPEVLHTLLEKLSAELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + IFD+ A L + + ++ + +I ++++Y I F KG G L +
Sbjct: 193 GVNAVMIFDSWANALEKEAYLKFSWDYLKKISKELKKRYARIPVILFPKGVGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL ++G+
Sbjct: 252 -GEFDVFGVDWGTPLEMAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVEKILKIMGNKGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHNK 336
>gi|225691|prf||1310344A decarboxylase,uroporphyrinogen
Length = 367
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 180/338 (53%), Gaps = 9/338 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAATGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPV 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ AL V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG K Q + + YQ A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA---RSVGRIISAVRRK--Y 237
L+ YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 194 ILTHALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QG LDP L
Sbjct: 254 TRMPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKAREPVGKTVTLQGELDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + V +L+ G +I NLGHG+ P +DP++V
Sbjct: 313 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHV 350
>gi|253987882|ref|YP_003039238.1| uroporphyrinogen decarboxylase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779332|emb|CAQ82493.1| uroporphyrinogen decarboxylase [Photorhabdus asymbiotica]
Length = 358
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 191/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 5 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAEAGDFISLCKNTELACEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ L P+ ++
Sbjct: 65 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKSPILSRADVEKLPIPDPEME 124
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L+Y+L ++ ++RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 LSYVL---DAVRVIRKTLAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAV 181
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ R + +I+ + R+
Sbjct: 182 MHQLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLIRE 241
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 242 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSM 300
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 LYASPERIEQEVLTILQGFGVGSGHVFNLGHGIHQDVLPEHAGVFVEAV 349
>gi|319764569|ref|YP_004128506.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|330826785|ref|YP_004390088.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans K601]
gi|317119130|gb|ADV01619.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|329312157|gb|AEB86572.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans K601]
Length = 372
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 186/363 (51%), Gaps = 26/363 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 9 RNDTFLRACLRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL + DA+G + F E EGPR E L P++D L Y
Sbjct: 69 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRSEADVAQLAVPDMDR-LRY- 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +
Sbjct: 127 --VFDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGKGSDDYRMVKSLMYARPDLMHRI 184
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 185 LAVNADAVARYLNAQIDAGAQAVMIFDSWGGVLADGMFQQFSLAYTARVLAQLQRTGADG 244
Query: 241 K---FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDP 291
+ I F KG G L++ + L D +GLDW+ L A + GP +QGN+DP
Sbjct: 245 QPVPRIVFTKGGGIWLQDMKAL-DCEVLGLDWTANLGQARAIVGGSAGGPGKALQGNIDP 303
Query: 292 MRLVVGNQVMIDGVNAILDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + A+LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 304 NVLFAPPEAIAAQARAVLDSFGTPHTDKDTTGPTHIFNLGHGISQHTPPEHVAALVEAVH 363
Query: 343 SEK 345
Sbjct: 364 GHS 366
>gi|187479681|ref|YP_787706.1| uroporphyrinogen decarboxylase [Bordetella avium 197N]
gi|115424268|emb|CAJ50821.1| uroporphyrinogen decarboxylase [Bordetella avium 197N]
Length = 356
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 181/330 (54%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +F+ + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PIWLMRQAGRYLPEYNATRARAGSFMGLAQNPAYATEVTLQPLERYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGPR P+ + L P+++ L Y +F ++S +R+ L
Sbjct: 83 PDAMGLGLDFAPGEGPRFAHPLRDEADVARLAVPDMEK-LRY---VFDAVSSIRRALDGR 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + + Y + +L+ ++ + YL AQI
Sbjct: 139 VPLIGFAGSPWTIACYMVEGRGSDDYRKIKTLLYSRPELLHRVLEINAEATTRYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + IFD+ G L + ++ ++ R+I+ + R+ + I+F KG G L++
Sbjct: 199 AGAQAVMIFDSWGGVLADGLYQAFSLAYTRRVIAGLHREREGRRVPVIAFTKGGGLWLED 258
Query: 256 YRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+ +A+GLDW+V L + +QGNLDPM L Q + LD
Sbjct: 259 I-AASGCDAVGLDWTVNLGQARARVADAVALQGNLDPMTLFGSAQAIRAEARRTLDSFGP 317
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+G G +FNLGHGI+ P+ V++LV V
Sbjct: 318 VGKGGHVFNLGHGISQFTPPEAVIELVDEV 347
>gi|160896015|ref|YP_001561597.1| uroporphyrinogen decarboxylase [Delftia acidovorans SPH-1]
gi|238058035|sp|A9BPZ7|DCUP_DELAS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160361599|gb|ABX33212.1| uroporphyrinogen decarboxylase [Delftia acidovorans SPH-1]
Length = 370
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 187/346 (54%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P++D L Y +F +++ +R+ L
Sbjct: 84 PDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVPDMDK-LRY---VFDAVTSIRRALDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGKGSDDYRLVKSLMYARPDLMHRILAINADSVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ + R + + I F KG G L
Sbjct: 200 AGAQAVMVFDSWGGVLADGAFQEFSLAYTKRVLAGLNRTGADGQDVPRIVFTKGGGIWLP 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + L D +GLDW+ L+ A + + GP +QGN+DP L + + + A+
Sbjct: 260 DMKDL-DCEVLGLDWTANLARARAIVGGEVGGPGKALQGNIDPNVLFAPPERVAEQARAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+TV S
Sbjct: 319 LDSFGAPHTDRTTTGPTHIFNLGHGISQFTPPEHVAALVETVHSHS 364
>gi|317014025|gb|ADU81461.1| uroporphyrinogen decarboxylase [Helicobacter pylori Gambia94/24]
Length = 339
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 122/327 (37%), Positives = 186/327 (56%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+ DAAILFSDILV+
Sbjct: 16 PIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVV 75
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G N+ F+ +GP ++ IT + + L LNY ++ +IS R+KL
Sbjct: 76 PLEMGLNLEFIPKKGPHFLETITDLKSVESLKVGAYKQLNY---VYDTISQTRQKLSKEK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCG+PWT+A+YMI K + +++ Y LL+ LS EYL QI A
Sbjct: 133 ALIGFCGSPWTLATYMIESEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQA 192
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ + +FD+ A L + + ++ + +I ++++Y + I F KG G L +
Sbjct: 193 GVNAVMVFDSWASALEKEAYVKFSWDYLKKISKELKKRYAHIPVILFPKGIGAYLDSID- 251
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + G+DW PL A ++ + V QGNL+P RL N + +GV IL ++G+
Sbjct: 252 -GEFDVFGVDWGTPLESAKKILGDKYVLQGNLEPTRLYDKN-ALEEGVERILKIMGNRGH 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P + +N LV+ V ++
Sbjct: 310 IFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|46447147|ref|YP_008512.1| uroporphyrinogen decarboxylase [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697618|sp|Q6MB12|DCUP_PARUW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|46400788|emb|CAF24237.1| probable uroporphyrinogen decarboxylase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 364
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 198/351 (56%), Gaps = 29/351 (8%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L+ LQ + PP+WLMRQAGR+L YR +R+K+ +FLDMC+ PE E+TL PI Y
Sbjct: 30 RLLQALQCRNNSRPPVWLMRQAGRHLASYRALREKY-SFLDMCHNPELIAEVTLLPIEAY 88
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDILVI +AL VRF + GP ++ PIT +I L DL L +
Sbjct: 89 QVDAAILFSDILVIPEALKVGVRFEDKVGPIIEKPITNLHDIEKLAMPEDL--TSLEFVK 146
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ I L+ +L ++ LIGFCGAP+TVASYMI G +D + + + Y + F+ LL +
Sbjct: 147 EGIRCLQPRL--NVPLIGFCGAPFTVASYMIEGKTSRDFKKIKHWMYHEPQGFHTLLRKI 204
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D S YL QI AGV +QIFD+ A L +F+ ++ + I+ +++ P I
Sbjct: 205 ADWSIAYLNMQIDAGVHALQIFDSWANTLSYRQFQEFSLNYLKYILKGLKKDIP---LIL 261
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWS---------VPLSFALELQKEGPVQGNLDPMRLV 295
F +G+ + + + A+GLDW+ +P AL QGNLDP L
Sbjct: 262 FCRGSSVFGPDLASIKPA-AVGLDWNCRVKRMRDVIPYPIAL--------QGNLDPDLLY 312
Query: 296 VGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + VNA+LD + G FI NLGHGI P V + V LV+TVR +
Sbjct: 313 APLPKIREEVNALLDEMEGDRGFILNLGHGIFPDVSEEAVRTLVETVRERR 363
>gi|323491910|ref|ZP_08097082.1| uroporphyrinogen decarboxylase [Vibrio brasiliensis LMG 20546]
gi|323313853|gb|EGA66945.1| uroporphyrinogen decarboxylase [Vibrio brasiliensis LMG 20546]
Length = 355
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 193/350 (55%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A++ + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAVKRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V+ IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVSTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|227328378|ref|ZP_03832402.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 354
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT+ + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVNLPVPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + + L
Sbjct: 124 --VMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L +++ ++ + +I+ ++R+
Sbjct: 182 LDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDGLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYAD 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAGFGEGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|126207600|ref|YP_001052825.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
L20]
gi|190149381|ref|YP_001967906.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307262699|ref|ZP_07544327.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166234229|sp|A3MYI4|DCUP_ACTP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058008|sp|B3GZV2|DCUP_ACTP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126096392|gb|ABN73220.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914512|gb|ACE60764.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871954|gb|EFN03670.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 354
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|260061128|ref|YP_003194208.1| Uroporphyrinogen-III decarboxylase [Robiginitalea biformata
HTCC2501]
gi|88785260|gb|EAR16429.1| Uroporphyrinogen-III decarboxylase [Robiginitalea biformata
HTCC2501]
Length = 349
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 194/343 (56%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE E+T+QPIRRY
Sbjct: 14 LKALRGETVERPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELASEITVQPIRRYGM 72
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V GP + +P+ + + P+ + L Y++
Sbjct: 73 DAAILFSDILVVPQAMDIEVEMKPGIGPWLPNPVRSVADVEKAVVPDAEDALGYVM---D 129
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +KL + LIGF G+PWT+ Y + G K + + F + A + LL+ ++
Sbjct: 130 AIRLTNEKLGGQVPLIGFAGSPWTIFCYCVQGQGSKSFDKAKAFCFSQPEAAHALLEKIT 189
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ +YL A++ AGV +Q+FD+ G L +++ ++ + + RI+ A++ P I F
Sbjct: 190 QTTIDYLKAKVAAGVHAVQLFDSWGGMLSPADYQEFSWQYLQRIVDALKDLAP---VIVF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L+ + + ++A+G+DW++ A EL +QGN DP RL+ +
Sbjct: 247 GKGCWFALETMAQ-SGASALGVDWTLTPQKARELSGGNITLQGNFDPARLLSPPDTIRRM 305
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNV---LDLVKTVRSE 344
V ++ G +I NLGHGI P+V ++ +D VKT R E
Sbjct: 306 VREMIRGFGKDKYIVNLGHGILPEVPVEHAGAFIDAVKTYREE 348
>gi|165975568|ref|YP_001651161.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|238058009|sp|B0BS17|DCUP_ACTPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|165875669|gb|ABY68717.1| uroporphyrinogen-III decarboxylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 354
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKAFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTIDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|149907610|ref|ZP_01896357.1| uroporphyrinogen decarboxylase [Moritella sp. PE36]
gi|149809280|gb|EDM69209.1| uroporphyrinogen decarboxylase [Moritella sp. PE36]
Length = 354
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 195/351 (55%), Gaps = 16/351 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKESVDQTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F E EGP+ + PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFSEGEGPKFERPITCKADVDKIGMPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ G K + + A+
Sbjct: 121 --LQY---VMNAVRTIRKNLNGSVPLIGFSGSPWTLATYMVEGSGTKTFTKIKKMAFSEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D YL AQI AG + +FDT G L ++++++ + + +I+ +
Sbjct: 176 QTLHLLLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMHKIVDGLT 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R K F K G ++ T +AIGLDW++ ++ A + + +QGN+DP
Sbjct: 236 RFNDGRKVPVTLFTKNGGQWIEQI-AATGCDAIGLDWTIDIAEAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + + V+ IL G+G + NLGHGI V+P+ ++ V
Sbjct: 295 SMLYASPERIREEVSTILAGFGTGNGHVMNLGHGIHLDVEPEKAGVFIEAV 345
>gi|269965864|ref|ZP_06179958.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 40B]
gi|269829528|gb|EEZ83768.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 40B]
Length = 355
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|150024155|ref|YP_001294981.1| uroporphyrinogen decarboxylase [Flavobacterium psychrophilum
JIP02/86]
gi|166234249|sp|A6GVN8|DCUP_FLAPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|149770696|emb|CAL42160.1| Uroporphyrinogen decarboxylase [Flavobacterium psychrophilum
JIP02/86]
Length = 341
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 191/339 (56%), Gaps = 12/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLPE+ +R K+ +F C TPE E+T+QPIRR
Sbjct: 8 LKALKGETVQRPPVWMMRQAGRYLPEFIALRDKY-DFFTRCQTPELAAEITVQPIRRIAP 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIY-LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G V EN GP + +PI T Q++ ++ P++ L Y +F
Sbjct: 67 DAAILFSDILVVPQAMGIEVLMKENVGPFLPNPIRTIQDVERVIVPDVHQTLGY---VFD 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++ L + + LIGF G+PWT+ Y + G K + + F + + A + LL ++
Sbjct: 124 AIKLTKQMLNDEVPLIGFAGSPWTIMCYAVEGQGSKSFDKAKGFCFSHPEAAHVLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AG + IQIFD+ G L +++ ++ + + +II A+ P I F
Sbjct: 184 DTTIAYLTEKVKAGCNAIQIFDSWGGMLSPVDYQEFSWKYINQIIEALADITP---VIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + ++A+G+DW+ A L +QGN DP RL+ V+
Sbjct: 241 GKGCWFALGEMGK-SKASALGVDWTCSPRHARYLSGGNITLQGNFDPSRLLSPIPVIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ ++D G +I NLGHGI P + + V V+
Sbjct: 300 VHEMIDEFGKDKYIVNLGHGILPNIPVDHAKAFVDAVKE 338
>gi|213962221|ref|ZP_03390485.1| uroporphyrinogen decarboxylase [Capnocytophaga sputigena Capno]
gi|213955227|gb|EEB66545.1| uroporphyrinogen decarboxylase [Capnocytophaga sputigena Capno]
Length = 340
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 183/339 (53%), Gaps = 12/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L VL G PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 8 LRVLNGETTQRPPVWMMRQAGRYLPEFRALRDKY-DFFTRCQTPELAAEITIQPVDIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ + GP + +PI T + + PNI L Y + +
Sbjct: 67 DAAILFSDILVVPQAMNIPFEMKKGVGPWLPNPIRTAKDVAQVTIPNIQERLGY---VIE 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + ++ L N + LIGF G+PWT+ Y + G +D+ + F + + LL ++
Sbjct: 124 AVKLTKQMLNNRVPLIGFAGSPWTILCYAVEGAGSRDYATAKEFCFTQPELAHQLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P K I F
Sbjct: 184 DTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEALA---PLTKVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
AKG Y L + + A+G+DW+ A +L V QGN DP +L+ +
Sbjct: 241 AKGCWYALPEMAT-SKAAALGVDWTCAPKTARQLTGGNKVLQGNFDPSQLLAPPAQIKKK 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++D G +I NLGHGI P V +N + V+ V+
Sbjct: 300 VKEMIDAFGKDHYIANLGHGILPNVPIENAIAFVEAVKE 338
>gi|257091720|ref|YP_003165361.1| uroporphyrinogen decarboxylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044244|gb|ACV33432.1| uroporphyrinogen decarboxylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 359
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 182/332 (54%), Gaps = 7/332 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY + RK+ +FL +C P E+TLQP+ RY+ DAAILFSDIL I
Sbjct: 22 PVWLMRQAGRYLPEYCETRKRAGSFLQLCKNPALACEVTLQPLARYDLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F + EGPR + +E + + ++L + +++ +R+ L N + L
Sbjct: 82 PDAMGLGLYFTDGEGPRFERPLREEWAIRDLTAPDPWDHLRYVMDAVAEIRRALHNSVPL 141
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+P+T+A YM+ G D+ + Y+ + +L +D YL AQI +G
Sbjct: 142 IGFAGSPYTLACYMVEGASSSDYRCIKGMLYERPDLLHRILSVTADAVTAYLNAQIESGA 201
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ IFD+ G L +E ++ + + RI+ + R+ + I F KG G L+
Sbjct: 202 QAVMIFDSWGGSLSAAAYEEFSLQYMQRIVGNLLRERGGERVPSIVFTKGGGLWLEAIAD 261
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
+ +A+GLDW++ + A + +QGN+DP L + + +L+ G+G
Sbjct: 262 I-GCDAVGLDWTIDIGEARRRVGDRVALQGNIDPAVLFASPEKVAAEARRVLESYGAGQN 320
Query: 317 --FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+FNLGHGI+ P+NV LV+ V + +
Sbjct: 321 TGHVFNLGHGISQFTPPENVTALVEEVHAHSV 352
>gi|330828457|ref|YP_004391409.1| Uroporphyrinogen decarboxylase [Aeromonas veronii B565]
gi|328803593|gb|AEB48792.1| Uroporphyrinogen decarboxylase [Aeromonas veronii B565]
Length = 355
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 191/349 (54%), Gaps = 15/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQDVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RRY DAAILFSDIL + DA+G + F + EGPR + PIT+ Q + + +P +L
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPITSMADVQALPIPDPEDELGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 124 ----VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R++
Sbjct: 180 LLLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIREHD 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGQWLEQI-AATGCDALGLDWTTDIADAKRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +IL G G +FNLGHGI V+P++ V V
Sbjct: 299 ATPARIREEVASILAGFGHGNGHVFNLGHGIHQDVNPEHAGVFVNAVHE 347
>gi|195124551|ref|XP_002006755.1| GI18416 [Drosophila mojavensis]
gi|193911823|gb|EDW10690.1| GI18416 [Drosophila mojavensis]
Length = 356
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 189/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRK-LHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIRTPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + Y LL
Sbjct: 128 YVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLYDYPEDSKLLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+DV +YL Q+ AG ++QIF++ A L + EF ++ + RI + ++
Sbjct: 188 NLLTDVIVDYLEMQVEAGAQMLQIFESSAEHLTKDEFLVWSVPFLRRIRDDLVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP +
Sbjct: 248 VSTVPLTIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAAVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ ++ G +I NLGHGITPQ ++ LV V
Sbjct: 307 RDPSELHTLTTDMVHKFGKSRYIANLGHGITPQTPIASMEVLVDAV 352
>gi|121596148|ref|YP_988044.1| uroporphyrinogen decarboxylase [Acidovorax sp. JS42]
gi|166234228|sp|A1WCJ3|DCUP_ACISJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120608228|gb|ABM43968.1| uroporphyrinogen decarboxylase [Acidovorax sp. JS42]
Length = 370
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 184/342 (53%), Gaps = 26/342 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + EY E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRAKAGSFMGLATNVEYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR E L P++D L Y +F +++ +R+ L
Sbjct: 84 PDAMGLGLSFAEGEGPRFAKAVRDEADVAALAVPDLDK-LRY---VFDAVTSIRRALNGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAVNADAVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + + I F KG G L
Sbjct: 200 AGAQAVMVFDSWGGVLADGCFQQFSLEYTRRVLAQLKRTGVDGQDVPRIVFTKGGGIWLD 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + Q GP +QGN+DP L + + V A+
Sbjct: 260 DMKDI-DCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNVLFAPPEAVAAQVRAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 319 LDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVEAV 360
>gi|117619073|ref|YP_855320.1| uroporphyrinogen decarboxylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560480|gb|ABK37428.1| uroporphyrinogen decarboxylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 396
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 191/349 (54%), Gaps = 15/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 46 KNDRYLRALLRQEVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RRY DAAILFSDIL + DA+G + F + EGPR + PIT+ Q + + +P +L
Sbjct: 106 RRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPITSMADVQALPVPDPEDELGY- 164
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 165 ----VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 220
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R++
Sbjct: 221 LLLDKLADSVIAYLNAQIKAGAQAVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIREHD 280
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 281 GRRVPVTLFTKNGGQWLEQI-AATGCDALGLDWTTDIADAKRRVGDKVALQGNMDPSMLY 339
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +IL G G +FNLGHGI V+P++ V V
Sbjct: 340 ANPARIREEVASILAGFGHGNGHVFNLGHGIHQDVNPEHAGVFVNAVHE 388
>gi|91228705|ref|ZP_01262618.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 12G01]
gi|91187731|gb|EAS74050.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 12G01]
Length = 355
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 189/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 299 ASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|27364622|ref|NP_760150.1| uroporphyrinogen decarboxylase [Vibrio vulnificus CMCP6]
gi|37681334|ref|NP_935943.1| uroporphyrinogen decarboxylase [Vibrio vulnificus YJ016]
gi|320155016|ref|YP_004187395.1| uroporphyrinogen III decarboxylase [Vibrio vulnificus MO6-24/O]
gi|29611744|sp|Q8DD14|DCUP_VIBVU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|45476824|sp|Q7MGS7|DCUP_VIBVY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27360741|gb|AAO09677.1| uroporphyrinogen decarboxylase [Vibrio vulnificus CMCP6]
gi|37200085|dbj|BAC95914.1| uroporphyrinogen-III decarboxylase [Vibrio vulnificus YJ016]
gi|319930328|gb|ADV85192.1| uroporphyrinogen III decarboxylase [Vibrio vulnificus MO6-24/O]
Length = 355
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 192/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDCTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I + +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V +IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 299 ASHDRIREEVASILEGFGHGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|206889921|ref|YP_002248647.1| uroporphyrinogen decarboxylase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|226696382|sp|B5YK82|DCUP_THEYD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|206741859|gb|ACI20916.1| uroporphyrinogen decarboxylase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 338
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 201/344 (58%), Gaps = 17/344 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+ L+ +G + P+W MRQAGRY+PEY+++R+K+ +FL MC TPE E+TLQP++
Sbjct: 2 KEAFLKACRGIRTDYTPVWFMRQAGRYMPEYQKLRQKY-DFLTMCKTPEIAAEVTLQPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDIL+ +A+G + F++++GP++ P T ++ +L +L L +
Sbjct: 61 VLGVDAAILFSDILIPLEAMGLKIEFIDDKGPQVLPNIRTVADLEILG---ELNLEKIGF 117
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +I IL +L ++ LIGF +P+T+A+Y+I GG K+ + F + F+ L+
Sbjct: 118 VFDAIRILINEL--NVPLIGFAASPFTLATYVIEGGSTKEFVNTKRFMFLEPEGFHKLMS 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ + +YL QI AGV +QIFDT AG L ++E++ V R+I ++ + P F
Sbjct: 176 LFTKATQKYLNEQIRAGVHAVQIFDTWAGILSPFDYESFVKPYVKRLIESL-KTVPVIYF 234
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
S G L N+ + +++ + +DW + + A +L K P+QGNLDP+ L+ ++ +
Sbjct: 235 SSNTAG----LINHLKELNADVLSIDWRIDIKDATDLLKNKPLQGNLDPLTLLGSDEELF 290
Query: 303 DGVNAIL-DVLGSGPFIFNLGHG--ITPQVDP-KNVLDLVKTVR 342
V +L G+ IFNLGHG I VD K ++D V +
Sbjct: 291 KRVEKVLIGARGAKSHIFNLGHGVNINTSVDKLKKLVDFVHEFK 334
>gi|332288959|ref|YP_004419811.1| uroporphyrinogen decarboxylase [Gallibacterium anatis UMN179]
gi|330431855|gb|AEC16914.1| uroporphyrinogen decarboxylase [Gallibacterium anatis UMN179]
Length = 355
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 186/351 (52%), Gaps = 14/351 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKETRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI Q L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFAKPIQCQADIAQLPIPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPALLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
LD L+D YL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHQQYREFSLRYMEKIVKGLIRESEGR 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
F KG G L+ T +AIGLDW+V ++ A + + +QGN+DP L
Sbjct: 242 TVPVTLFTKGGGLWLEAIAD-TGCDAIGLDWTVDIAQAKARVGDKVALQGNMDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGI---TPQVDPKNVLDLVKTVRSE 344
+ + V IL G G +FNLGHGI P PK +D + E
Sbjct: 301 AERIEQEVETILAGYGKGYGHVFNLGHGIHQDVPVESPKVFVDAIHRYSKE 351
>gi|242241109|ref|YP_002989290.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech703]
gi|242133166|gb|ACS87468.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech703]
Length = 360
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 185/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR P+T+ + L P+ +L L Y
Sbjct: 65 RRYHLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTSHADVVKLPIPDPELELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + + L
Sbjct: 124 --VMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFTAPETLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVTLYLNAQIRAGAQSVMIFDTWGGALSGADYREFSLHYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSLLYAQ 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +IL G+G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAGYGAGAGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|307128999|ref|YP_003881015.1| uroporphyrinogen decarboxylase [Dickeya dadantii 3937]
gi|306526528|gb|ADM96458.1| uroporphyrinogen decarboxylase [Dickeya dadantii 3937]
Length = 357
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 182/345 (52%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRYN DAAILFSDIL + DA+G + F EGPR P+T L P+ + L Y
Sbjct: 65 RRYNLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPVPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + R + L
Sbjct: 124 --VMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPRTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGADYREFSLHYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVATILAGFGAGNGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|167627169|ref|YP_001677669.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189083007|sp|B0TWR0|DCUP_FRAP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167597170|gb|ABZ87168.1| Uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 344
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 192/344 (55%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ + + PPIW+MRQAGRYLPEYR +R KF+NF+DMC + E+ L P+
Sbjct: 2 RKLFLDAFKHEKLEKPPIWIMRQAGRYLPEYRAVRSKFENFMDMCRNADACCEVALHPLE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP DPI +++ + + + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGVGPVFSDPIESEKDLNRLKSAEDSVGDLEYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + + ++ LIGF G+PWT+A+YM+ G K + R Y N + + LL
Sbjct: 122 YNAVRTTKAAI--NVPLIGFTGSPWTLAAYMVEGSGSKQFSKLRKMMYANPQLMHALLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L +++ ++ + + I V++K N +
Sbjct: 180 LADITVIYLLEQVKAGASSLMIFDTWGGILPLEQYKEFSLKYMEYIAKNVKQK-SNVPVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DW+V L A G V QGN DP L + +
Sbjct: 239 FFTKGGSNFFEELKDKS-CDGVGVDWNVTLDQARHRIGVGKVLQGNFDPAFLYGTSDSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V ++ + S +I NLGHGI P ++P NV +V +R
Sbjct: 298 NTVKKNMEFIQSDKLNNYIVNLGHGIYPDINPDNVKIMVDAIRE 341
>gi|317494903|ref|ZP_07953313.1| uroporphyrinogen decarboxylase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917091|gb|EFV38440.1| uroporphyrinogen decarboxylase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 354
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITCKADVEKLPVPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRKNLAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 182 LDKIADSVILYLNAQIKAGAQSVMIFDTWGGVLTPRDYREFSLNYMHKIVDGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDWS ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWSTDIADARRRVGDKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V+ IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 301 AARIEQEVSTILEGFGHGTGHVFNLGHGIHQDVPPEHAGTFVEAV 345
>gi|73977140|ref|XP_861812.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 2 [Canis familiaris]
Length = 332
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 177/324 (54%), Gaps = 9/324 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+++ R ++F C +PE ELTLQP+RR+ DAAI+FSDILV+ AL
Sbjct: 1 MRQAGRYLPEFKETRAA-QDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQAL 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V +GP +P+ + + + L +FQ+I++ R++L + LIGF
Sbjct: 60 GMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGYVFQAITLTRQRLAGRVPLIGF 119
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ +YMI GG Q + + YQ +A + LL L+D YL+ Q+ AG +
Sbjct: 120 AGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLRILTDALVPYLVGQVAAGAQAL 179
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-----KFISFAKGAGYMLKNYRR 258
Q+F++HAG LG F +A V + V+ + A I FAK + L+ +
Sbjct: 180 QLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGLAPVPMIIFAKDGHFALEELAQ 239
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+GLDW+V A E + K +QGNLDP L + + V +LD G +
Sbjct: 240 -AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEIGRLVQKMLDDFGPQRY 298
Query: 318 IFNLGHGITPQVDPKNVLDLVKTV 341
I NLGHG+ P +DP++V V V
Sbjct: 299 IANLGHGLYPDMDPEHVGAFVDAV 322
>gi|91777014|ref|YP_546770.1| uroporphyrinogen decarboxylase [Methylobacillus flagellatus KT]
gi|123253838|sp|Q1GXV8|DCUP_METFK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91711001|gb|ABE50929.1| uroporphyrinogen decarboxylase [Methylobacillus flagellatus KT]
Length = 354
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 187/342 (54%), Gaps = 11/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L LQ P+W+MRQAGRYLPEYR+ RKK +F+D+C + E+TLQP+ R+
Sbjct: 10 LRALQRQRTPYTPVWMMRQAGRYLPEYRETRKKAGSFMDLCKNTDLATEVTLQPLDRFPL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G + F E EGP+ + +E L P+I L Y +
Sbjct: 70 DAAILFSDILTIPDAMGLGLYFEEGEGPKFERTLREESDIRKLAVPDIGSELRY---VTD 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++S +R+ L + LIGF G+PWT+A+YM+ G D + AY + +L +
Sbjct: 127 AVSQIRRALDGRVPLIGFSGSPWTLATYMVEGRGGTDFLTIKQMAYARPDLLHHILSVTA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFI 243
YL AQI AG + IFD+ G L + ++ ++ + + +I+S + ++ I
Sbjct: 187 QAVTAYLNAQIAAGAQAVMIFDSWGGALSHYAYQEFSLQYMQQIVSGLTKESEGRVVPSI 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG G L++ T ++A+GLDW++ L A + + + +QGN+DP L+ + +
Sbjct: 247 VFTKGGGLWLESQAE-TGADALGLDWTISLGEARKRVGSKVALQGNMDPAILLSTPEAVE 305
Query: 303 DGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL G G +FNLGHGIT +N ++K V +
Sbjct: 306 KEVARILADYGIGNGHVFNLGHGITQFTPHENAEAMIKAVHA 347
>gi|260596100|ref|YP_003208671.1| uroporphyrinogen decarboxylase [Cronobacter turicensis z3032]
gi|260215277|emb|CBA27199.1| Uroporphyrinogen decarboxylase [Cronobacter turicensis z3032]
Length = 354
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALQRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITGKADVEKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAIAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|221128019|ref|XP_002154761.1| PREDICTED: similar to Uroporphyrinogen decarboxylase [Hydra
magnipapillata]
Length = 391
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 183/348 (52%), Gaps = 27/348 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R K +F+ + EY E+TLQP+ RY DAAILFSDIL +
Sbjct: 43 PLWLMRQAGRYLPEYVATRAKAGSFMGLATNTEYATEVTLQPLERYPLDAAILFSDILTV 102
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLP--- 135
DA+G + F + EGPR PI T+ ++ L L Y +F ++S +RK L
Sbjct: 103 PDAMGLGLSFAQGEGPRFASPIKTEADVAKLEVPDMAKLQY---VFDAVSSIRKALTVDG 159
Query: 136 -NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL A
Sbjct: 160 KGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTMMYSRPDLMHRMLAINADSVAAYLNA 219
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF---ISFAKGAGY 251
QI AG + +FD+ G L + F+ ++ R++ ++R + K I F KG G
Sbjct: 220 QIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLKQLKRFGTDGKVVPRIVFTKGGGL 279
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQ---KEGP---VQGNLDPMRLVVGNQVMIDGV 305
L++ + L D +GLDW+V L+ A L + GP +QGN+DP L + V
Sbjct: 280 WLQDMQAL-DCEVLGLDWTVNLAKARALVGGIENGPGKALQGNIDPNVLFAPPAAIETEV 338
Query: 306 NAILDVL-------GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+LD G+GP IFNLGHGI+ P +V LV V S
Sbjct: 339 AKVLDSFGKPFQGSGTGPTHIFNLGHGISQYTPPDHVAALVAAVHSHS 386
>gi|116878447|ref|YP_356198.3| uroporphyrinogen decarboxylase [Pelobacter carbinolicus DSM 2380]
gi|123743071|sp|Q3A6H9|DCUP_PELCD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114843083|gb|ABA88028.4| uroporphyrinogen decarboxylase [Pelobacter carbinolicus DSM 2380]
Length = 343
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 185/335 (55%), Gaps = 18/335 (5%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G + P+WLMRQAGRYLP+YR+IR++ K FL++C TPE E+TLQP+ DAAIL
Sbjct: 14 GRPVTRTPVWLMRQAGRYLPQYRKIRERVK-FLELCKTPELAAEVTLQPVDALGVDAAIL 72
Query: 74 FSDILVIADALGRNVRFVENEGPRMDP-----ITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
FSDIL+ +A+G+N+ + P ++P + + +L P D+ + ++I
Sbjct: 73 FSDILIPIEAMGQNLFY--RPAPVLEPPVRTAADVEALRVLQPEQDVPF-----VLETIR 125
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+LR++L + LIGF GAP+T+A YM+ G + + YQ + L+D ++D S
Sbjct: 126 LLRRELDGRVPLIGFGGAPFTLACYMVEGAGSRHFLALKRLMYQAPETYARLMDKITDTS 185
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL AQ AG +Q+FD+ G L +++ Y R++SA+ I F KG
Sbjct: 186 IVYLRAQAEAGAQALQVFDSWGGILSPADYQRYVLPYSRRLLSALGDF--GIPLIHFVKG 243
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNA 307
AG ML + + +GLDW L+ A ++ G VQGNLDP L+ ++ V
Sbjct: 244 AGAML-DLVAMAGGQVVGLDWCTSLNRARDILGNGMAVQGNLDPSVLLGAQDIIEREVRR 302
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
ILD P IFNLGHGI P+V P+N LV V
Sbjct: 303 ILDENAGRPGHIFNLGHGILPEVPPENAAFLVDCV 337
>gi|307249316|ref|ZP_07531310.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858610|gb|EFM90672.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 354
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 192/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+ + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMSLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|253997672|ref|YP_003049736.1| uroporphyrinogen decarboxylase [Methylotenera mobilis JLW8]
gi|253984351|gb|ACT49209.1| uroporphyrinogen decarboxylase [Methylotenera mobilis JLW8]
Length = 354
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 196/358 (54%), Gaps = 20/358 (5%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K L+ L + P+W+MRQAGRYLPEYR+ RK +FL +C ++ ++T
Sbjct: 1 MNQLKNDTFLKALMRQPTDYTPVWMMRQAGRYLPEYRESRKTAGSFLQLCKNAQFATDVT 60
Query: 60 LQPIRRYNF-DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDL 115
LQP+ RY DAAILFSDIL + DA+G + F E EGP+ + QE L+ P+
Sbjct: 61 LQPLDRYPLLDAAILFSDILTVPDAMGLGLYFEEGEGPKFERTLQQEADIQKLVVPD--- 117
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ L +F ++ +RK L + LIGF G+PWT+A+YM+ G D + AY
Sbjct: 118 -MAKLQYVFDAVRSIRKALDGRVPLIGFSGSPWTLATYMVEGKGGTDFLNTKKMAYARPE 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-- 233
+ +L+ + +YL AQI AG + IFD+ G L + ++ ++ + +I++ +
Sbjct: 177 LLHHILETTAQTVIQYLNAQIMAGAQAVMIFDSWGGALAHNAYKEFSLNYMQKIVNGLIK 236
Query: 234 ---RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNL 289
R P+ I F KG G L+ + S+A+GLDW+V + A + + + +QGNL
Sbjct: 237 TNDGRTVPS---IVFTKGGGLWLEAQAEI-GSDALGLDWTVDIGSARQRVGDKVALQGNL 292
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
DP L+ + + V A+L G+G +FNLGHGIT P+N ++ +R+ +
Sbjct: 293 DPAILLSTPEAIEREVAAVLASYGNGHGHVFNLGHGITQWTPPENAAAMLSAIRAHSL 350
>gi|312375040|gb|EFR22487.1| hypothetical protein AND_15199 [Anopheles darlingi]
Length = 570
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 194/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 225 KNDNLLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRAKH-DFFTVCRTPELACEVTMQPL 283
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + LL N + L +
Sbjct: 284 RRFDLDASIIFSDILVIPQALGIVVEMKPGVGPVLPEPLVGPADLLRLNQTGSIERLKYV 343
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I+++R+ L + L GF GAPWT+ YMI GG K + + + +++ A LLD
Sbjct: 344 GEAITMMRRMLDGKVPLFGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTEHAEASQKLLDI 403
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----P 238
L+D +YL+ Q+ AG ++Q+F++ A L + +F + + + RI + V RK P
Sbjct: 404 LTDQVVDYLVMQVKAGAQMLQVFESSADHLSKEQFLSVSLPCLQRIRTDVLRKLADEQVP 463
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLV 295
+ FAKGA + L + T IGLDW++ A ++ GP +QGNLDP +
Sbjct: 464 AVPMVLFAKGAMHSLAEQAQ-TGYEVIGLDWTIDPEEA--RKRVGPNVTLQGNLDPQDMY 520
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
++ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 521 KSSEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMNVLVQAV 566
>gi|153835073|ref|ZP_01987740.1| uroporphyrinogen decarboxylase [Vibrio harveyi HY01]
gi|156972579|ref|YP_001443486.1| uroporphyrinogen decarboxylase [Vibrio harveyi ATCC BAA-1116]
gi|269959593|ref|ZP_06173974.1| uroporphyrinogen decarboxylase [Vibrio harveyi 1DA3]
gi|166234295|sp|A7N075|DCUP_VIBHB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148868469|gb|EDL67575.1| uroporphyrinogen decarboxylase [Vibrio harveyi HY01]
gi|156524173|gb|ABU69259.1| hypothetical protein VIBHAR_00219 [Vibrio harveyi ATCC BAA-1116]
gi|269835651|gb|EEZ89729.1| uroporphyrinogen decarboxylase [Vibrio harveyi 1DA3]
Length = 355
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|45476838|sp|Q7NZ00|DCUP_CHRVO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 182/344 (52%), Gaps = 10/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEYR R + +F+ +C +P+Y E+TLQP+
Sbjct: 5 KNDTFLRALLKEPVEYTPIWMMRQAGRYLPEYRATRARAGSFMGLCTSPDYATEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLL 121
R+ DAAILFSDIL + DA+G + F E EGP+ P+ + I L P L Y
Sbjct: 65 DRFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQRPLRDEAAIRALAPADMGKLQY-- 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG D + Y + +L
Sbjct: 123 -VFDAVASIRKALDGRVPLIGFSGSPFTLACYMVEGGGSDDFRHVKAMLYSRPELLHHIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + YL AQI AG +QIFDT G L + ++ + RI++ ++R+ +
Sbjct: 182 EANTQSVIAYLNAQIDAGAQAVQIFDTWGGALSHAAYREFSLAYMQRIVAGLKREADGRR 241
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F KG G L++ + ++ +GLDW+ + A + + +QGN DP L
Sbjct: 242 VPVIVFTKGGGQWLEDIAAI-GADCVGLDWTTDIGQARARVGAKVALQGNFDPNALFAEP 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGI+ DP + LV+ V
Sbjct: 301 AAIEREVERILQSYGQGSGHVFNLGHGISQFADPAHAGALVEAV 344
>gi|325108961|ref|YP_004270029.1| uroporphyrinogen decarboxylase [Planctomyces brasiliensis DSM 5305]
gi|324969229|gb|ADY60007.1| Uroporphyrinogen decarboxylase [Planctomyces brasiliensis DSM 5305]
Length = 345
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 195/346 (56%), Gaps = 19/346 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++++ L+ ++ PIW+MRQAGRYLPEY +R + FL++C TPE E+T+ +
Sbjct: 7 SRMMKALRREPVDTTPIWIMRQAGRYLPEYMAVRNRV-TFLELCQTPELAAEVTVTAQQV 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-----LNY 119
DAAILF+D+L + +G ++ + + EGP++ +P+ T N +ID F L
Sbjct: 66 LGVDAAILFADLLPMLMPMGIDLTYEKGEGPKIHNPLRT------NADIDNFRELESLGE 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F ++ ++R++LP I L+GF GAP+T+ASY I GG K + + Y + A++
Sbjct: 120 LQFVFDAVKLIREQLPADIPLLGFAGAPFTLASYCIEGGGSKSYVATKSLMYGDPTAWDA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ L++ YL AQI AG +Q+FD+ AGCLG ++ Y RII AV P
Sbjct: 180 VMSRLTNSLIRYLKAQIEAGCQAVQLFDSWAGCLGPDDYRKYVLPYTKRIIDAV---LPE 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
A I+F G +L ++ AIGLDW V L+ A E + + VQGNLDP+ L
Sbjct: 237 APVINFLTGNPALLP-VQKEAGGAAIGLDWRVDLAEAWETVGYDFAVQGNLDPVTLFADI 295
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + +L P IFNLGHG+ P + P+NV LV+ V
Sbjct: 296 PVIRERALEVLKKAAGRPGHIFNLGHGVMPGMKPENVKALVEIVHE 341
>gi|227487183|ref|ZP_03917499.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541649|ref|ZP_03971698.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092841|gb|EEI28153.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182617|gb|EEI63589.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 350
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 189/358 (52%), Gaps = 25/358 (6%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
MN R+ +L+ +G + P+W MRQAGR LPEYR+IR LD C+ PE E
Sbjct: 1 MNRRQLTHAPLLQAARGETPDHTPVWFMRQAGRSLPEYREIRANI-GMLDSCFNPELLAE 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+TLQP+RR+ D AILFSDI+V A G + + GP +D P+ T+ P ++
Sbjct: 60 ITLQPVRRHGVDGAILFSDIVVPLKAAGVKLDIIPGRGPVLDHPLRTRADIEALPVLE-- 117
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + + Q I I+ +L + TLIGF GAP+T+ASY++ GG K+H + +
Sbjct: 118 -HEITEVAQGIEIILDELTDTQTLIGFVGAPFTLASYLVEGGPSKNHIHTKALMHNEPET 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L++ ++ +L Q+HAG+D +Q+FD+ AG L EH++ +Y +I+ A +
Sbjct: 177 WKLLMEKITATVTAFLQTQMHAGIDAMQLFDSWAGFLSEHDYRSYVQPYSAQILEAAQ-- 234
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-----LQKEGPVQGNLDP 291
I F G G +L + ++ +G+DW VPL A E + +QGNLDP
Sbjct: 235 --GIPRIHFGVGTGELLPDM-AAAGADVVGVDWRVPLDRAAERIHRVSGRATGLQGNLDP 291
Query: 292 MRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + D + NA + + IFNLGHG+ P+ DP + V+ +
Sbjct: 292 AILFAGEKTIADEIARITSEANAAISSGDAVGHIFNLGHGVLPETDPDVITRAVELIH 349
>gi|212213216|ref|YP_002304152.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuG_Q212]
gi|226696372|sp|B6J229|DCUP_COXB2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|212011626|gb|ACJ19007.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuG_Q212]
Length = 361
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 193/350 (55%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + Q++ L P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+TV++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVETVQNFSI 350
>gi|323498399|ref|ZP_08103396.1| uroporphyrinogen decarboxylase [Vibrio sinaloensis DSM 21326]
gi|323316541|gb|EGA69555.1| uroporphyrinogen decarboxylase [Vibrio sinaloensis DSM 21326]
Length = 355
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 192/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I + +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGIPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I++ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVNGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ + A++ + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|251791425|ref|YP_003006146.1| uroporphyrinogen decarboxylase [Dickeya zeae Ech1591]
gi|247540046|gb|ACT08667.1| uroporphyrinogen decarboxylase [Dickeya zeae Ech1591]
Length = 357
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGPR P+T L P+ +L L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPIPDPELELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + R + L
Sbjct: 124 --VMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPRTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGADYREFSLHYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G+G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVATILAGFGTGNGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|238785560|ref|ZP_04629541.1| Uroporphyrinogen decarboxylase [Yersinia bercovieri ATCC 43970]
gi|238713545|gb|EEQ05576.1| Uroporphyrinogen decarboxylase [Yersinia bercovieri ATCC 43970]
Length = 354
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I++ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVNGLTRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ L+ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDLADARRRVGDKVALQGNMDPSI 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHA 347
>gi|195475074|ref|XP_002089810.1| updo [Drosophila yakuba]
gi|194175911|gb|EDW89522.1| updo [Drosophila yakuba]
Length = 356
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 189/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRK-LHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWGVPYLKRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 248 IPVVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARTLVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAV 352
>gi|260774675|ref|ZP_05883580.1| uroporphyrinogen III decarboxylase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609394|gb|EEX35543.1| uroporphyrinogen III decarboxylase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 355
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G +RF EGP D PIT + + P+ + L Y
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGTPDPEGELKY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + + L
Sbjct: 124 --VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 182 LDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ F K G L+ T +A+GLDW++ + A++ + + +QGN+DP L
Sbjct: 242 RVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 301 PERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|152979635|ref|YP_001345264.1| uroporphyrinogen decarboxylase [Actinobacillus succinogenes 130Z]
gi|171704382|sp|A6VQT2|DCUP_ACTSZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150841358|gb|ABR75329.1| uroporphyrinogen decarboxylase [Actinobacillus succinogenes 130Z]
Length = 354
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 190/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLREPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY+ DAAILFSDIL + DA+G + F EGP+ + N P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVENAAMVENLPIPDPETELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + + L
Sbjct: 124 --VMNAVRTIRRELQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQTLHKL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD +SD YL AQI AG + IFDT G L ++ +++ + + +I++ + R+
Sbjct: 182 LDKVSDAVILYLNAQIKAGAQAVMIFDTWGGVLAHRDYPDFSLQYMQKIVAGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ + +A+G+DW+V L+ A ++ + +QGN+DP L
Sbjct: 242 KVPITLFTKGGGLWLEQIAN-SGCDAVGVDWTVNLAEAKAKIGHKVALQGNMDPSVLYAR 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V +IL G+G +FNLGHGI P +PK +D V
Sbjct: 301 PARIRQEVRSILADFGNGSGHVFNLGHGIHQDVPVENPKIFVDAV 345
>gi|328471089|gb|EGF41995.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 10329]
Length = 355
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|254230354|ref|ZP_04923739.1| uroporphyrinogen decarboxylase [Vibrio sp. Ex25]
gi|262392951|ref|YP_003284805.1| uroporphyrinogen III decarboxylase [Vibrio sp. Ex25]
gi|151937121|gb|EDN55994.1| uroporphyrinogen decarboxylase [Vibrio sp. Ex25]
gi|262336545|gb|ACY50340.1| uroporphyrinogen III decarboxylase [Vibrio sp. Ex25]
Length = 355
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVADILEGFGDTGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|326796613|ref|YP_004314433.1| uroporphyrinogen decarboxylase [Marinomonas mediterranea MMB-1]
gi|326547377|gb|ADZ92597.1| Uroporphyrinogen decarboxylase [Marinomonas mediterranea MMB-1]
Length = 366
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 10/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +FL +C ++ E+TLQP+
Sbjct: 6 KNDRFLRALLKEPVDTTPVWMMRQAGRYLPEYRTSRATAGDFLSLCKNQDFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLL 121
RY DAAILFSDIL I DA+G + F EGP+ + ++ L L+Y
Sbjct: 66 ERYELDAAILFSDILTIPDAMGLGLYFETGEGPKFKHTVRSKADVDALPIATTTDLDY-- 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++++ +RK L + LIGF G+PWT+A+YM+ GG KD + YQ + LL
Sbjct: 124 -VMRAVTTIRKALNGKVPLIGFSGSPWTLATYMVEGGSSKDFRHIKAMMYQTPDVLHALL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+ +YL QI AG +QIFDT G L ++ ++ + +I+ + R++ K
Sbjct: 183 NKLALSVIDYLNGQIKAGAQAVQIFDTWGGALSGPMYQRFSLMYMKQIMDGLIREHEGKK 242
Query: 242 F--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F K G L+N +A+GLDW+ ++ A E +QGN+DP L
Sbjct: 243 IPVIMFTKNGGQWLENMAA-AGPDALGLDWTTDIAEARARVGESVALQGNIDPCVLYADK 301
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V +L+ G G +FNLGHGI V+P + L+ V
Sbjct: 302 DVIEREVALVLEGFGHGSGHVFNLGHGIHQYVNPDHPKFLIDAVHE 347
>gi|212709046|ref|ZP_03317174.1| hypothetical protein PROVALCAL_00078 [Providencia alcalifaciens DSM
30120]
gi|212688335|gb|EEB47863.1| hypothetical protein PROVALCAL_00078 [Providencia alcalifaciens DSM
30120]
Length = 354
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + F EGPR + N P+ ++ L Y
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKKPVASAADVKNIPVPDPEMELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ + L
Sbjct: 124 --VMDAVRAIRKALKGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQ+ AG + IFDT G L + ++ ++ R + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQVRAGAQSLMIFDTWGGVLTKRDYLEFSLRYMHKIVDGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEEM-AATGCDALGLDWTTEIADARRRVGDQVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G G +FNLGHGI V+P++ V V
Sbjct: 301 PARIEQEVQHILAGFGQGEGHVFNLGHGIHQDVEPEHAGAFVDAV 345
>gi|260222502|emb|CBA32129.1| Uroporphyrinogen decarboxylase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 367
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 183/348 (52%), Gaps = 27/348 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R K +F+ + EY E+TLQP+ RY DAAILFSDIL +
Sbjct: 19 PLWLMRQAGRYLPEYVATRAKAGSFMGLATNTEYATEVTLQPLERYPLDAAILFSDILTV 78
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLP--- 135
DA+G + F + EGPR PI T+ ++ L L Y +F ++S +RK L
Sbjct: 79 PDAMGLGLSFAQGEGPRFASPIKTEADVAKLEVPDMAKLQY---VFDAVSSIRKALTVDG 135
Query: 136 -NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL A
Sbjct: 136 KGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTMMYSRPDLMHRMLAINADSVAAYLNA 195
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF---ISFAKGAGY 251
QI AG + +FD+ G L + F+ ++ R++ ++R + K I F KG G
Sbjct: 196 QIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLKQLKRFGTDGKVVPRIVFTKGGGL 255
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQ---KEGP---VQGNLDPMRLVVGNQVMIDGV 305
L++ + L D +GLDW+V L+ A L + GP +QGN+DP L + V
Sbjct: 256 WLQDMQAL-DCEVLGLDWTVNLAKARALVGGIENGPGKALQGNIDPNVLFAPPAAIETEV 314
Query: 306 NAILDVL-------GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+LD G+GP IFNLGHGI+ P +V LV V S
Sbjct: 315 AKVLDSFGKPFQGSGTGPTHIFNLGHGISQYTPPDHVAALVAAVHSHS 362
>gi|307244920|ref|ZP_07527017.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253874|ref|ZP_07535726.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258328|ref|ZP_07540069.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854085|gb|EFM86293.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863078|gb|EFM95020.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867512|gb|EFM99359.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 354
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 192/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+ WT+A+YM+ GG K + + Y + +
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSSWTLATYMVEGGSSKAFTKIKKMMYADPKI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 297 LYAQPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|330797190|ref|XP_003286645.1| uroporphyrinogen decarboxylase [Dictyostelium purpureum]
gi|325083393|gb|EGC36847.1| uroporphyrinogen decarboxylase [Dictyostelium purpureum]
Length = 360
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 190/341 (55%), Gaps = 11/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + PIW+MRQAGRYLPE++ +R +F +C TPE ++TLQP+ R+
Sbjct: 16 LKACKGEDVPYVPIWIMRQAGRYLPEFKSVRADV-DFFSVCRTPELACKVTLQPLDRFPL 74
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP-----NIDLFLNYLLPI 123
DAAI+FSDILV+ A+G V+ + +GP P +EI L+ N++ L Y +
Sbjct: 75 DAAIIFSDILVVPQAMGLEVQMIPGKGPHF-PNPVKEISDLSRVKYPVNVNEELGY---V 130
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++++ RK L + LIGF GAPWT+ +Y I GG + ++ + Y++ + + L
Sbjct: 131 FDALTLTRKNLQGRVPLIGFSGAPWTLMTYCIEGGGGSNMATSKGWLYKHPKEAHEFLSK 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ V +YL+ QI AG +QIFD+ + L F+ + + +I ++ +P I
Sbjct: 191 ITRVCIDYLLGQIKAGAQALQIFDSWSNELSPALFKEFCLPYLVQIGKELKAAHPEIPLI 250
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
FAKG+ + L++ + + +GLDW++ S A ++ + +QGNLDP L G+QV+
Sbjct: 251 CFAKGSNFALEDLSKSGAYDVLGLDWTIEPSVARQMVGDRVSLQGNLDPCVLYCGDQVIR 310
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L G+ +I NLGHG+ P + VK V
Sbjct: 311 EETEKMLKSFGTKRYIANLGHGMHPTHPIEGPESFVKAVHE 351
>gi|238798675|ref|ZP_04642149.1| Uroporphyrinogen decarboxylase [Yersinia mollaretii ATCC 43969]
gi|238717493|gb|EEQ09335.1| Uroporphyrinogen decarboxylase [Yersinia mollaretii ATCC 43969]
Length = 354
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 190/351 (54%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ +++ + +I++ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLDFSLNYMHKIVNGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ L+ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDLADARRRVGDKVALQGNMDPSI 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHT 347
>gi|32034577|ref|ZP_00134733.1| COG0407: Uroporphyrinogen-III decarboxylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 354
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 190/345 (55%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLAWEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGP+ PI Q L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAQ 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 301 PERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAV 345
>gi|194858452|ref|XP_001969181.1| GG24087 [Drosophila erecta]
gi|190661048|gb|EDV58240.1| GG24087 [Drosophila erecta]
Length = 356
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRK-LHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLEWGVPYLKRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 248 IPVVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPEELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAV 352
>gi|416892|sp|P32362|DCUP_RAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|5524747|emb|CAB50784.1| uroporphyrinogen decarboxylase [Rattus norvegicus]
Length = 364
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 180/338 (53%), Gaps = 9/338 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTL+P+
Sbjct: 12 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLEPV 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ AL V V +GP +P+ + + + L
Sbjct: 71 RRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG K Q + + YQ A + LL
Sbjct: 131 VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLLG 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA---RSVGRIISAVRRK--Y 237
L+ YLI Q+ AG +Q+F++HAG LG F +A R V + + A +K
Sbjct: 191 ILTHALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 250
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QG LDP L
Sbjct: 251 TRMPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKAREPVGKTVTLQGELDPCALYA 309
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + V +L+ G +I NLGHG+ P +DP++V
Sbjct: 310 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHV 347
>gi|254509117|ref|ZP_05121218.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 16]
gi|219547955|gb|EED24979.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 16]
Length = 355
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I + +P +L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGIPDPEGELKY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 124 ----VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ + A++ + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|296137546|ref|YP_003644788.1| uroporphyrinogen decarboxylase [Thiomonas intermedia K12]
gi|295797668|gb|ADG32458.1| uroporphyrinogen decarboxylase [Thiomonas intermedia K12]
Length = 364
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 190/351 (54%), Gaps = 19/351 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY
Sbjct: 11 LRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAQNPHFATEVTLQPLDRYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL + DA+G +RF EGP+ D P+ T+ L P++D L Y +F
Sbjct: 71 DAAILFSDILTVPDAMGLGLRFEAGEGPKFDRPLRTEADVAALAVPDMDK-LRY---VFD 126
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++S +R+ L + LIGF G+PWT+A YM+ GG D+ + Y + +L
Sbjct: 127 AVSEIRRALVQNGTQRVPLIGFSGSPWTLACYMVEGGGSDDYRTVKTMLYSRPDLMHRIL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP--N 239
++ A+YL AQI AG + IFD+ G L + F+ ++ ++I+A++++ P +
Sbjct: 187 AVNAEAVAQYLAAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYSRQVIAALKQRAPQTD 246
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F KG G L+ T ++A+GLDW+ L+ A + + +QGNLDP L
Sbjct: 247 VPVILFTKGGGQWLEAMAD-TGADALGLDWTTSLAQARARVGQLVALQGNLDPNVLFAPP 305
Query: 299 QVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHGI+ P++V LV+ V +
Sbjct: 306 AAIEKEVQRLLHSFGPVGVGAGHVFNLGHGISQFTPPEHVSALVEAVHTHS 356
>gi|145297830|ref|YP_001140671.1| uroporphyrinogen decarboxylase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166234230|sp|A4SJ51|DCUP_AERS4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|142850602|gb|ABO88923.1| uroporphyrinogen decarboxylase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 355
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 189/347 (54%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQDVDMTPVWMMRQAGRYLPEYKATRAVAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RRY DAAILFSDIL + DA+G + F + EGPR + PI + Q + + +P +L
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPIKSMADVQALPIPDPEDELGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 124 ----VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIGYLNAQIKAGAQSVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIRENE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGQWLEQI-AATGCDALGLDWTIDIADAKRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG +FNLGHGI VDP++ V V
Sbjct: 299 AAPARIREEVATILAGFGSGNGHVFNLGHGIHQDVDPEHAGVFVNAV 345
>gi|163803947|ref|ZP_02197777.1| uroporphyrinogen decarboxylase [Vibrio sp. AND4]
gi|159172248|gb|EDP57148.1| uroporphyrinogen decarboxylase [Vibrio sp. AND4]
Length = 355
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVAGILEGFGDTGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|229519871|ref|ZP_04409304.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TM 11079-80]
gi|229343112|gb|EEO08097.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TM 11079-80]
Length = 359
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 192/354 (54%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AGV + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGVQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLM 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGLRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|300714859|ref|YP_003739662.1| uroporphyrinogen decarboxylase [Erwinia billingiae Eb661]
gi|299060695|emb|CAX57802.1| Uroporphyrinogen decarboxylase [Erwinia billingiae Eb661]
Length = 355
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 187/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRYN DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYNLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFTGSPWTLATYMVEGGSSKAFTKLKKMMYAEPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +II ++R+
Sbjct: 178 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIIDGLQRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NDGRRVPVTMFTKGGGQWLEAM-AATGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V IL G+G +FNLGHGI V P++ V+ V +
Sbjct: 297 LYAAPARIEQEVATILAGYGNGSGHVFNLGHGIHQDVPPEHAGVFVEAVHT 347
>gi|238752799|ref|ZP_04614267.1| Uroporphyrinogen decarboxylase [Yersinia rohdei ATCC 43380]
gi|238708997|gb|EEQ01247.1| Uroporphyrinogen decarboxylase [Yersinia rohdei ATCC 43380]
Length = 354
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHSPITCRADVEKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYAEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V+ IL G G +FNLGHGI V P+N V V
Sbjct: 297 LYAAPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPENAGAFVDAV 345
>gi|227115021|ref|ZP_03828677.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 354
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR PIT+ + L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITSHADVVNLPVPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + + L
Sbjct: 124 --VMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++ YL AQI AG + +FDT G L +++ ++ + +I+ ++R+
Sbjct: 182 LDKLANSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDGLQRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLYAD 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|198283012|ref|YP_002219333.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667464|ref|YP_002425216.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247533|gb|ACH83126.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519677|gb|ACK80263.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 354
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 189/330 (57%), Gaps = 11/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R + +FL +C TPE E+TLQPI R+ DAAILFSDIL I
Sbjct: 23 PVWLMRQAGRYLPEYRATRARAGDFLSLCTTPELACEVTLQPIDRFPLDAAILFSDILTI 82
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
+G + F E EGP P+ + +I L+ P+ + L + + ++ ++R+++
Sbjct: 83 PYVMGLGLEFQEGEGPVFARPLRSAADISALSQPDPETELRF---VMDAVRLIRREIDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YMI G +D + Y + + LL L+ YL AQI
Sbjct: 140 VPLIGFAGSPWTLACYMIEGRGSRDFIHIKGLLYSDPALLHRLLRHLAQSVTSYLNAQIA 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + IFDT G L + ++ + I++A++R+ + + I F KG G L+
Sbjct: 200 AGAQAVMIFDTWGGSLSTPAYAEFSLAYMSEIVAALQREAEDRRVPVILFTKGGGNWLEA 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ ++A+GLDW+ L A + L +QGN+DP+ L + ++ IL+ GS
Sbjct: 260 M-AASGADALGLDWTTELGHARQRLGNSVALQGNMDPIALYGSPEGIVREATRILESHGS 318
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G IFNLGHGITPQ ++V LV++V+S
Sbjct: 319 GTGHIFNLGHGITPQTPVEHVAILVESVQS 348
>gi|221069350|ref|ZP_03545455.1| uroporphyrinogen decarboxylase [Comamonas testosteroni KF-1]
gi|220714373|gb|EED69741.1| uroporphyrinogen decarboxylase [Comamonas testosteroni KF-1]
Length = 371
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 183/342 (53%), Gaps = 26/342 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P++D L Y +F +++ +RK L
Sbjct: 84 PDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVPDMDK-LRY---VFDAVTNIRKALNGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM G D+ + Y + +L+ +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEVNADSVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR---KYPNAKFISFAKGAGYMLK 254
AG + IFD+ G L + F+ ++ R+++ ++R + I F KG G L
Sbjct: 200 AGAQAVMIFDSWGGVLADGAFQEFSLTYTKRVLAGLKRIGVDGSDVPRIVFTKGGGIWLP 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + + GP +QGN+DP L + + A+
Sbjct: 260 DMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVLFAAPEQVAAQARAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 319 LDSFGKPHTDKRTTGPTHIFNLGHGISQFTPPEHVAALVEAV 360
>gi|74318797|ref|YP_316537.1| uroporphyrinogen decarboxylase HemE [Thiobacillus denitrificans
ATCC 25259]
gi|74058292|gb|AAZ98732.1| uroporphyrinogen decarboxylase HemE [Thiobacillus denitrificans
ATCC 25259]
Length = 356
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/332 (37%), Positives = 184/332 (55%), Gaps = 11/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL +C TP+ E+TLQP+ RY DAAILFSDIL +
Sbjct: 22 PLWLMRQAGRYLPEYNATRARAGDFLTLCKTPDLATEVTLQPLARYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F + EGPR + P+ + EI L+ P+ L Y++ +SI R+ L
Sbjct: 82 PDAMGLGLYFSQGEGPRFERPLRDEWEIRDLSAPDPTDHLGYVMDAVRSI---RRALDGA 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YMI GG D+ + Y+ + +L+ + +YL AQI
Sbjct: 139 VPLIGFSGSPYTLACYMIEGGSSDDYRHIKTMLYRRPDLLHRVLEVNTRAVTDYLNAQIE 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS--FAKGAGYMLKN 255
AG + IFD+ G L H + ++ + RI+S + ++ + S F KG G L+
Sbjct: 199 AGAQAVMIFDSWGGSLTPHGYREFSLDYMERIVSGLIKEREGRRIPSIIFTKGGGNWLEA 258
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++A+GLDW++ + A + +QGNLDP L + + I+D G+
Sbjct: 259 MAG-AGADAVGLDWTLDIGEARRRVGDRVALQGNLDPCALHGTPESIRAEAERIVDAYGN 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P +FNLGHGI+ DP NV LV V S
Sbjct: 318 HPGHVFNLGHGISQFTDPANVAVLVDAVHSRS 349
>gi|260913276|ref|ZP_05919758.1| uroporphyrinogen decarboxylase [Pasteurella dagmatis ATCC 43325]
gi|260632863|gb|EEX51032.1| uroporphyrinogen decarboxylase [Pasteurella dagmatis ATCC 43325]
Length = 354
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 187/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLREPVDMTPVWMMRQAGRYLPEYRATRTVAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI ++ L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFAHPIDSKSAVQNLPIPDPESELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R +L + LIGF G+PWT+A+YM+ G K + + Y + + + L
Sbjct: 124 --VMNAVRTIRLELKGDVPLIGFSGSPWTLATYMVEGCSSKAFTKIKRMLYADPQLLHQL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G LG EF +++ + + +I+ A+ R+
Sbjct: 182 LDKLADSVTLYLNAQIKAGAQSVMIFDTWGGVLGHREFVDFSLQYMHKIVDALIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+G+DW+V L A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAMAE-TGCDALGIDWTVNLGEAKARVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQV---DPKNVLDLV 338
+ V +IL G G +FNLGHGI V PK +D +
Sbjct: 301 PDRIEQEVRSILADFGQGSGHVFNLGHGIHQDVLASSPKIFVDAI 345
>gi|94312422|ref|YP_585632.1| uroporphyrinogen decarboxylase [Cupriavidus metallidurans CH34]
gi|166234277|sp|Q1LHL3|DCUP_RALME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|93356274|gb|ABF10363.1| uroporphyrinogen decarboxylase [Cupriavidus metallidurans CH34]
Length = 367
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 184/340 (54%), Gaps = 21/340 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 22 PLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ T+ L P++ L Y +F ++S +RK L
Sbjct: 82 PDAMGLGLSFAQGEGPRFAHPLRTEADVAKLAVPDM-ASLQY---VFDAVSEIRKALVQD 137
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +LD + + YL
Sbjct: 138 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYARPDLMHRILDINATAVSAYLN 197
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGY 251
AQI AG + +FDT G L + ++ ++ + +++ ++R++ + I F KG G
Sbjct: 198 AQIEAGAQAVMVFDTWGGALADGMYQAFSLAYMRKVLQGLKREHDGQQIPVIVFTKGGGI 257
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAIL 309
L+ + +AIGLDW+V L+ A + EG V QGN+DP L + + V +L
Sbjct: 258 WLEEIAGI-GPDAIGLDWTVNLAKA-RRRTEGRVALQGNIDPTVLFASESAIREQVRGVL 315
Query: 310 DVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D GS +FNLGHGI+ P+NV LV V +
Sbjct: 316 DSYASAGGSDGHVFNLGHGISQFTPPENVSVLVDEVHNHS 355
>gi|32491257|ref|NP_871511.1| hypothetical protein WGLp508 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340035|sp|Q8CWI5|DCUP_WIGBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|25166464|dbj|BAC24654.1| hemE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 360
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 194/330 (58%), Gaps = 11/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQ+GRYL EY+ I+K+ K+FL +C TP+ + + L PI++++ DAAI+FSDIL++
Sbjct: 22 PIWIMRQSGRYLKEYQSIKKQAKDFLSLCKTPDLSSKAALIPIKKFSLDAAIIFSDILIL 81
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G +V F EN GP ++PI++ ++ LN P+ + L Y+L SI I+ K+L
Sbjct: 82 PYAMGMDVNFYENLGPSFLNPISSISDMKNLNVPDPEKNLKYVL---DSIKIICKELDKK 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF G+PWT+A YMI G K + + YQNS+ ++LL +++ YL +QI
Sbjct: 139 IPLIGFSGSPWTLACYMIEGKCNKIFSKIKKMIYQNSKELHFLLKKITNSIILYLNSQII 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
GV+ I IFDT G L E ++ Y+ + II + KY K F K G +K
Sbjct: 199 YGVNAIIIFDTWGGILTEEKYCEYSLHYMSLIIKNLFCKYKGNKIPVTIFTKNGGQWIKK 258
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG- 313
+ + + I LDWSV + +A ++ + +QGN+DP L + + N IL G
Sbjct: 259 IAK-SGCDVIALDWSVDIEYARKQVNGKIAIQGNMDPFELYGSFSSIEEETNKILSKFGY 317
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IF+LGHGI P+NV L+++V +
Sbjct: 318 NSGHIFSLGHGIYKDTPPENVNFLIESVHN 347
>gi|198459979|ref|XP_001361569.2| GA14829 [Drosophila pseudoobscura pseudoobscura]
gi|198136866|gb|EAL26148.2| GA14829 [Drosophila pseudoobscura pseudoobscura]
Length = 356
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKRLTP--DGALSRLT 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEDFLLWAVPYLRRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP +
Sbjct: 248 VPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDADELRALTTEMVHKFGKSRYIANLGHGITPQTPITSMDVLVEAV 352
>gi|240948536|ref|ZP_04752909.1| uroporphyrinogen decarboxylase [Actinobacillus minor NM305]
gi|240297044|gb|EER47615.1| uroporphyrinogen decarboxylase [Actinobacillus minor NM305]
Length = 354
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 187/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT--TQEIYLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI TQ L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENLTQVQNLPIPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPHILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKAGAQAVMIFDTWGGVLAHQDYKTFSLHYMHKIVDGLMRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAI-AATGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V+ IL G+G +FNLGHGI P PK +D +
Sbjct: 301 ADRIEQEVSQILAGFGNGSGHVFNLGHGIHQDVPVESPKIFVDAI 345
>gi|312888378|ref|ZP_07747954.1| uroporphyrinogen decarboxylase [Mucilaginibacter paludis DSM 18603]
gi|311299212|gb|EFQ76305.1| uroporphyrinogen decarboxylase [Mucilaginibacter paludis DSM 18603]
Length = 340
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 195/331 (58%), Gaps = 17/331 (5%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR++ EY I+ K+ +FL+MC TPE ++T+ P+ + DAAILFSDILV
Sbjct: 18 PPVWMMRQAGRFMKEYWDIKNKY-SFLEMCKTPELAADVTMLPVNLLDIDAAILFSDILV 76
Query: 80 IADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G ++ F +N GPR +P+ TQ +I L + L Y + +I +++++L
Sbjct: 77 TGEAMGGDLSFTQNVGPRFANPVRTQADIDNLQVEVGDKLQY---VADAIKVIQQRLNGK 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF GAP+TV SY++ GG KD ++ + + LL ++ V+A+YL QI
Sbjct: 134 IPLIGFAGAPFTVMSYLVEGGSSKDFKLTKLMLHNEPAMAHQLLSKIAQVTADYLNLQIA 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AGV+ +QIFD+ A L +++ ++ R + IIS + RK + ISF KG+ +
Sbjct: 194 AGVNAVQIFDSWAQALAWDDYKEFSHRYIVEIISKLNRK--DIPVISFCKGSS-VFAPLM 250
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGP----VQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ + +DW+V L L+++K P VQGNLDP L +V+ D ++ + + +
Sbjct: 251 AEAKPDVVSIDWNVDL---LDMKKRLPQGVAVQGNLDPHILYADKKVIKDRIHKLFERMR 307
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P ++FNLGHGI P + NV V+ ++
Sbjct: 308 DEPGYVFNLGHGIMPDIPFDNVKYAVEVIKE 338
>gi|264676544|ref|YP_003276450.1| uroporphyrinogen decarboxylase [Comamonas testosteroni CNB-2]
gi|262207056|gb|ACY31154.1| uroporphyrinogen decarboxylase [Comamonas testosteroni CNB-2]
Length = 400
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 184/346 (53%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 53 PLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPLDRFPLDAAILFSDILTV 112
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P++D L Y +F +++ +RK L
Sbjct: 113 PDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVPDMDK-LRY---VFDAVTNIRKVLNGR 168
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM G D+ + Y + +L+ +D A YL AQI
Sbjct: 169 VPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEVNADSVAAYLNAQID 228
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + IFD+ G L + F+ ++ R+++ ++R + I F KG G L
Sbjct: 229 AGAQAVMIFDSWGGVLADGAFQEFSLAYTKRVLAQLKRTGVDGSDVPRIVFTKGGGIWLP 288
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + + GP +QGN+DP L + + A+
Sbjct: 289 DMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVLFAAPEQVAAQARAV 347
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V S
Sbjct: 348 LDSFGKPHTDKSTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSHS 393
>gi|238765541|ref|ZP_04626455.1| Uroporphyrinogen decarboxylase [Yersinia kristensenii ATCC 33638]
gi|238696236|gb|EEP89039.1| Uroporphyrinogen decarboxylase [Yersinia kristensenii ATCC 33638]
Length = 365
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 11 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 70
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 71 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 130
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 131 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 187
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 188 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIRE 247
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 248 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSV 306
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 307 LYAPPARIEEEVSTILASFGQGDGHVFNLGHGIHQDVPPEHAGAFVKAVHA 357
>gi|152972859|ref|YP_001338005.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262043763|ref|ZP_06016866.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|166234252|sp|A6TGQ4|DCUP_KLEP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150957708|gb|ABR79738.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259038887|gb|EEW40055.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 354
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR P+ ++ L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 301 APRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPEHAGVFVEAV 345
>gi|148655883|ref|YP_001276088.1| uroporphyrinogen decarboxylase [Roseiflexus sp. RS-1]
gi|172048084|sp|A5UU35|DCUP_ROSS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148567993|gb|ABQ90138.1| uroporphyrinogen decarboxylase [Roseiflexus sp. RS-1]
Length = 348
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 188/344 (54%), Gaps = 13/344 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W MRQAGRY+PEYR IR+++ FL+M TPE E+T+QPIR
Sbjct: 4 SRFLAACRRQPVDATPVWFMRQAGRYMPEYRAIRERY-GFLEMVKTPELAAEITMQPIRA 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
++ DAAI+F+DIL + + +G ++ + + EGP + +P+ + L P+ + Y +
Sbjct: 63 FSVDAAIIFADILPLLEGMGLHLTYEQGEGPVIHNPVRSPADVAALRTPDPRETVAYTI- 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
Q+I ++++ L LIGF GAP+T+A+Y I GG +DH + Y +A+ L++
Sbjct: 122 --QAIRLVKRDLEGRAPLIGFSGAPFTLAAYAIEGGSSRDHRLTKALMYAEPQAWRELME 179
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPN 239
L+ + YLIAQI AG D +QIFD+ AG L ++ +Y V + I AVR P
Sbjct: 180 RLTAQVSAYLIAQIEAGADAVQIFDSWAGALAPGDYADYVLPFVQKCIIAVRAGCGIVPP 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F G ML R+ TD++ IGLDW + L G VQGNLDP L+
Sbjct: 240 PPIIYFGVGLSGMLGLLRQ-TDADVIGLDWRIHLDDGWAQVGPGVAVQGNLDPHTLLAPW 298
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ ILD P IFNLGHGI P+ V L + V
Sbjct: 299 TEVRRRTADILDRAAGRPGHIFNLGHGIVPETPVDTVRRLAEFV 342
>gi|123440686|ref|YP_001004678.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166234296|sp|A1JIJ1|DCUP_YERE8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122087647|emb|CAL10429.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 355
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSI 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 297 LYAPAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHA 347
>gi|152995149|ref|YP_001339984.1| uroporphyrinogen decarboxylase [Marinomonas sp. MWYL1]
gi|150836073|gb|ABR70049.1| uroporphyrinogen decarboxylase [Marinomonas sp. MWYL1]
Length = 366
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 184/348 (52%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +FL +C + E+TLQP+
Sbjct: 6 KNDRFLRALLKQPVDTTPVWMMRQAGRYLPEYRASRATAGDFLSLCKNDAFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF----LNY 119
+RY+ DAAILFSDIL I DA+G + F EGP+ + ++D N
Sbjct: 66 KRYDLDAAILFSDILTIPDAMGLGLYFETGEGPKF-----RHTIRSKADVDAIPVTTAND 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++++ +R L + LIGF G+PWT+A+YM+ GG KD + Y++ +
Sbjct: 121 LGYVMKAVTTIRHALNGDVPLIGFSGSPWTLATYMVEGGSSKDFRHIKAMMYRSPETLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFDT G L ++ ++ + +I+ + R +
Sbjct: 181 LLDKLAKSVTAYLNGQILAGAQALQIFDTWGGVLSGPMYQQFSLLYMKQILDGLIRVHEG 240
Query: 240 AKF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ I F K G L+N T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 KRIPVILFTKNGGQWLENMAA-TGPDALGLDWTTDIAEARARVGDKVALQGNIDPCVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G V+ V +L G+G +FNLGHGI V+P + L+ V
Sbjct: 300 GKDVIEHEVENVLSGFGTGSGHVFNLGHGIHQFVNPDHPKYLIDAVHE 347
>gi|119189677|ref|XP_001245445.1| hypothetical protein CIMG_04886 [Coccidioides immitis RS]
Length = 365
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 186/344 (54%), Gaps = 22/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ +G + PPIW+MRQAGRYLPEY + K ++F + C PE LTLQPI RY
Sbjct: 13 LLKAARGERVQRPPIWIMRQAGRYLPEYHEA-KGTRDFFECCRDPEVASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V VE +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVKAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYKYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + I + + +K
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIAANLPKKVV 248
Query: 237 ---YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPVQGNLDPM 292
Y FAKGA Y L + + + N +GLDW P +QGN DP
Sbjct: 249 ELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADPG 307
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G G +I NLGHGITP V+P+++
Sbjct: 308 CLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDL 351
>gi|195332855|ref|XP_002033108.1| GM21135 [Drosophila sechellia]
gi|195581918|ref|XP_002080776.1| GD10665 [Drosophila simulans]
gi|194125078|gb|EDW47121.1| GM21135 [Drosophila sechellia]
gi|194192785|gb|EDX06361.1| GD10665 [Drosophila simulans]
Length = 356
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 248 IPVVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAV 352
>gi|126662830|ref|ZP_01733829.1| Uroporphyrinogen decarboxylase HemE [Flavobacteria bacterium BAL38]
gi|126626209|gb|EAZ96898.1| Uroporphyrinogen decarboxylase HemE [Flavobacteria bacterium BAL38]
Length = 341
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 191/341 (56%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QPIR
Sbjct: 8 LRALKGETVERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCETPELAAEITVQPIRIVKP 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G +V +N GP + +PI T E + PNI L Y++
Sbjct: 67 DAAILFSDILVVPRAMGIHVELKDNLGPIIPNPIRTAEQVNQVFVPNIHETLGYVM---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + ++ L + + LIGF G+PWT+ Y + G K + F + N A + LL ++
Sbjct: 124 AVKLTKEMLNDEVPLIGFAGSPWTIFCYAVEGKGSKSFDTAKGFCFSNPVAAHLLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AG + IQIFD+ G L +++ ++ + + +I+ A+ + + I F
Sbjct: 184 DTTILYLKEKVKAGCNAIQIFDSWGGMLSPVDYQEFSWQYINQIVEALAEE---TEVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + ++A+G+DW+ A L + +QGN DP RL+ +
Sbjct: 241 GKGCWFALNDMAK-SKASALGVDWTCSPRNARYLTGGDITLQGNFDPSRLLSPIPTIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++D G +I NLGHGI P + + V+ V+ K
Sbjct: 300 VHEMIDEFGKDKYIVNLGHGILPNIPVDHAKAFVEAVKEYK 340
>gi|95928216|ref|ZP_01310964.1| uroporphyrinogen decarboxylase [Desulfuromonas acetoxidans DSM 684]
gi|95135487|gb|EAT17138.1| uroporphyrinogen decarboxylase [Desulfuromonas acetoxidans DSM 684]
Length = 345
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 189/341 (55%), Gaps = 15/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRYN 67
L+ G ++ P+WLMRQAGRYLP+YR++R + + FLD+C PE E+T+QPI +
Sbjct: 8 LKACWGQPVDRIPVWLMRQAGRYLPQYREVRSRGEGTFLDLCKDPERAAEVTIQPIDILD 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ---EIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + +G ++ F N GP +PI TQ + ++ N+ ++Y+ I
Sbjct: 68 ADAAILFSDILTPIEPMGMDLDF--NPGPVFANPIRTQADVDKLIVPENMAEAVSYVPAI 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
I LR + LIGF GAP+T+A YM+ G KD + Y + ++ L++
Sbjct: 126 ---IKRLRTAFEGRVPLIGFGGAPFTLACYMVEGKGSKDFAALKQMMYGDPSLYHALMEK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++++ YL QI AG IQIFDT G + H+FE + ++I+ + RK + I
Sbjct: 183 ITEMDRRYLNMQIEAGAQAIQIFDTWGGLVAPHDFEKFVLPYTKKLIAGLNRK--DIPVI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F K +G ML+ + S+ IGLDW V L A ++ E VQGNLDP L +
Sbjct: 241 YFVKNSGTMLELVKE-AGSDVIGLDWHVNLGKARDILGEDVAVQGNLDPTVLFAPKPYIE 299
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
V ILD P FIFNLGHGI P V P+N + +V V
Sbjct: 300 KEVQRILDENAGRPGFIFNLGHGIMPTVPPENAIFMVDAVH 340
>gi|299531310|ref|ZP_07044720.1| uroporphyrinogen decarboxylase [Comamonas testosteroni S44]
gi|298720717|gb|EFI61664.1| uroporphyrinogen decarboxylase [Comamonas testosteroni S44]
Length = 371
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 184/346 (53%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPLDRFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P++D L Y +F +++ +RK L
Sbjct: 84 PDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVPDMDK-LRY---VFDAVTNIRKVLNGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM G D+ + Y + +L+ +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEVNADSVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + IFD+ G L + F+ ++ R+++ ++R + I F KG G L
Sbjct: 200 AGAQAVMIFDSWGGVLADGAFQEFSLAYTKRVLAQLKRTGVDGSDVPRIVFTKGGGIWLP 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + + D +GLDW+ L A + + GP +QGN+DP L + + A+
Sbjct: 260 DMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVLFAAPEQVAAQARAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V S
Sbjct: 319 LDSFGKPHTDKSTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSHS 364
>gi|257464752|ref|ZP_05629123.1| uroporphyrinogen decarboxylase [Actinobacillus minor 202]
gi|257450412|gb|EEV24455.1| uroporphyrinogen decarboxylase [Actinobacillus minor 202]
Length = 354
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 187/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT--TQEIYLLNPNIDLFLNYL 120
RRY+ DAAILFSDIL I DA+G + F EGP+ PI TQ L P+ + L Y
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENLTQVQNLPIPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPHILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVIFYLNAQIKAGAQAVMIFDTWGGVLAHQDYKTFSLHYMHKIVDGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V+ IL G+G +FNLGHGI P PK +D +
Sbjct: 301 ADRIEQEVSQILAGFGNGSGHVFNLGHGIHQDVPVESPKIFVDAI 345
>gi|189083002|sp|A9KCZ5|DCUP_COXBN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 361
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 192/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + Q++ L P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|153208663|ref|ZP_01946915.1| uroporphyrinogen decarboxylase [Coxiella burnetii 'MSU Goat Q177']
gi|165919774|ref|ZP_02219517.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 334]
gi|212218110|ref|YP_002304897.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuK_Q154]
gi|226696371|sp|B6J5G8|DCUP_COXB1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120575849|gb|EAX32473.1| uroporphyrinogen decarboxylase [Coxiella burnetii 'MSU Goat Q177']
gi|165916857|gb|EDR35461.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 334]
gi|212012372|gb|ACJ19752.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuK_Q154]
Length = 361
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 192/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + Q++ L P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLAVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|317046452|ref|YP_004114100.1| uroporphyrinogen decarboxylase [Pantoea sp. At-9b]
gi|316948069|gb|ADU67544.1| uroporphyrinogen decarboxylase [Pantoea sp. At-9b]
Length = 355
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 187/350 (53%), Gaps = 12/350 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSHPITCRADVDKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRHNLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG I +FDT G L ++ ++ + +I+ +V +
Sbjct: 178 LHALLDKLADSVILYLNAQIKAGAQSIMVFDTWGGVLTGRDYREFSLYYMHKIVDSVLHE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDWS ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPITLFTKGGGQWLEAIAE-TGCDALGLDWSTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V +IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEQEVASILEGFGKGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|241667731|ref|ZP_04755309.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876275|ref|ZP_05248985.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842296|gb|EET20710.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 344
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 190/344 (55%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ + + PPIW+MRQAGRYLPEYR +R KF+NF+DMC + E+ L P+
Sbjct: 2 RKLFLDAFKHEKLEKPPIWIMRQAGRYLPEYRAVRSKFENFMDMCRNADACCEVALHPLE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP DPI +++ + + + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGVGPVFSDPIESEKDLNRLKSAEDSVGDLEYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + + ++ LIGF G+PWT+A+YM+ G K + R Y N + + LL
Sbjct: 122 YNAVRTTKAAI--NVPLIGFTGSPWTLAAYMVEGSGSKQFSKLRKMMYANPQLMHALLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL+ Q+ AG + IFDT G L ++ ++ + + I V++K N +
Sbjct: 180 LADIIVIYLLEQVKAGASSLMIFDTWGGILPLEQYREFSLKYMEYIAKNVKQK-SNVPVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DW+V L A G V QGN DP L + +
Sbjct: 239 FFTKGGSNFFEELKDKS-CDGVGVDWNVTLDQARHRIGVGKVLQGNFDPAFLYGTSDSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V ++ + S +I NLGHGI P ++P NV +V +R
Sbjct: 298 NTVKKNMEFIQSDKLNNYIVNLGHGIYPDINPDNVKIMVDAIRE 341
>gi|29653627|ref|NP_819319.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 493]
gi|161831037|ref|YP_001596224.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 331]
gi|38257443|sp|Q83EP0|DCUP_COXBU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083003|sp|A9NB09|DCUP_COXBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29540889|gb|AAO89833.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 493]
gi|161762904|gb|ABX78546.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 331]
Length = 361
Score = 208 bits (530), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 192/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + Q++ L P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|28899690|ref|NP_799295.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus RIMD
2210633]
gi|153838926|ref|ZP_01991593.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ3810]
gi|260878158|ref|ZP_05890513.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AN-5034]
gi|260897879|ref|ZP_05906375.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus Peru-466]
gi|260902144|ref|ZP_05910539.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ4037]
gi|31340033|sp|Q87KR0|DCUP_VIBPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28807942|dbj|BAC61179.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747634|gb|EDM58558.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ3810]
gi|308085522|gb|EFO35217.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus Peru-466]
gi|308090229|gb|EFO39924.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AN-5034]
gi|308110167|gb|EFO47707.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ4037]
Length = 355
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIDYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 299 ASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|149189249|ref|ZP_01867536.1| uroporphyrinogen decarboxylase [Vibrio shilonii AK1]
gi|148837003|gb|EDL53953.1| uroporphyrinogen decarboxylase [Vibrio shilonii AK1]
Length = 355
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 191/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRETRAVAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLHFEAGEGPKFERPITCKADVDKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQILH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 ALLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 299 AQPERIREEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|325983379|ref|YP_004295781.1| uroporphyrinogen decarboxylase [Nitrosomonas sp. AL212]
gi|325532898|gb|ADZ27619.1| uroporphyrinogen decarboxylase [Nitrosomonas sp. AL212]
Length = 357
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 11/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L L ++ P+WLMRQAGRYL EY R + +FL +C P + E+T+QP+
Sbjct: 5 KNDTLLRALLKQPVDYTPVWLMRQAGRYLAEYNATRARAGDFLALCKNPGFATEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLN-PNIDLFLNYL 120
R++ DAAILFSDIL I DA+G + F EGP + P+ + EI L P+ L Y
Sbjct: 65 ARFSLDAAILFSDILTIPDAMGLGLYFAHGEGPMFERPLREEKEIRALKVPDPGKELRY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +RK L N + LIGF G+P+T+A YM+ G + + + YQ + +
Sbjct: 124 --VMDAVSEIRKALDNRVPLIGFSGSPFTLACYMVEGRGGTEFREIKTMLYQRPELLHHI 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD + YL AQI +G ++ IFDT G L ++ ++ R + +I++ ++R +
Sbjct: 182 LDVNAKAVTAYLNAQIESGAQIVMIFDTWGGALSHGAYQEFSLRYMQQIVAGLKRDHEGM 241
Query: 241 KF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ + +A+GLDW++ + A + + +QGNLDP L
Sbjct: 242 RIPKIVFTKGGGLWLELIADI-GCDAVGLDWTIDIGEARRRVGDKVALQGNLDPSVLFAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+V+ V IL G+G +FNLGHGI+ P+N L++ V +
Sbjct: 301 PEVIAAEVEKILLSYGAGSGHVFNLGHGISQFTPPENAAALIEAVHT 347
>gi|62182618|ref|YP_219035.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161617306|ref|YP_001591271.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553829|ref|ZP_02347573.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994968|ref|ZP_02576058.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168467901|ref|ZP_02701738.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|224585707|ref|YP_002639506.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|75505417|sp|Q57H58|DCUP_SALCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083018|sp|A9N0K9|DCUP_SALPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767705|sp|C0Q2S9|DCUP_SALPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|62130251|gb|AAX67954.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161366670|gb|ABX70438.1| hypothetical protein SPAB_05157 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195629023|gb|EDX48415.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205321826|gb|EDZ09665.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327252|gb|EDZ14016.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|224470235|gb|ACN48065.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|267996468|gb|ACY91353.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160663|emb|CBW20194.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915273|dbj|BAJ39247.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223367|gb|EFX48434.1| Uroporphyrinogen III decarboxylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322717115|gb|EFZ08686.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132503|gb|ADX19933.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990986|gb|AEF09969.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 354
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|229512391|ref|ZP_04401866.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TMA 21]
gi|229350606|gb|EEO15551.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TMA 21]
Length = 359
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 192/354 (54%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A ++ + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVRDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|283836736|ref|ZP_06356477.1| uroporphyrinogen decarboxylase [Citrobacter youngae ATCC 29220]
gi|291067287|gb|EFE05396.1| uroporphyrinogen decarboxylase [Citrobacter youngae ATCC 29220]
Length = 354
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRYKLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIASKADVDKLPIPDPEDG 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPKA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAQSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|197247401|ref|YP_002149075.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|226696378|sp|B5F1I0|DCUP_SALA4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197211104|gb|ACH48501.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 354
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 186/346 (53%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|56415993|ref|YP_153068.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364920|ref|YP_002144557.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|204931282|ref|ZP_03222042.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|238913745|ref|ZP_04657582.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|81678034|sp|Q5PKA3|DCUP_SALPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058109|sp|B5BJR6|DCUP_SALPK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56130250|gb|AAV79756.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096397|emb|CAR62002.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|204319897|gb|EDZ05104.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|322616276|gb|EFY13186.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617281|gb|EFY14183.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625947|gb|EFY22762.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626655|gb|EFY23457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631490|gb|EFY28247.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635203|gb|EFY31921.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642592|gb|EFY39188.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646803|gb|EFY43307.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650801|gb|EFY47194.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655899|gb|EFY52200.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657298|gb|EFY53577.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665560|gb|EFY61745.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669743|gb|EFY65888.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670978|gb|EFY67110.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679198|gb|EFY75251.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679356|gb|EFY75403.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322688123|gb|EFY84087.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193391|gb|EFZ78601.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200689|gb|EFZ85762.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202178|gb|EFZ87234.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209289|gb|EFZ94224.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211614|gb|EFZ96451.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323218048|gb|EGA02761.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221337|gb|EGA05759.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225736|gb|EGA09957.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230976|gb|EGA15093.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235758|gb|EGA19840.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240072|gb|EGA24118.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242595|gb|EGA26617.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249697|gb|EGA33604.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252580|gb|EGA36421.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256926|gb|EGA40638.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262051|gb|EGA45615.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323263943|gb|EGA47457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268444|gb|EGA51914.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 354
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|238899280|ref|YP_002924963.1| uroporphyrinogen decarboxylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259645151|sp|C4K8F9|DCUP_HAMD5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229467041|gb|ACQ68815.1| uroporphyrinogen decarboxylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 356
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 181/329 (55%), Gaps = 11/329 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY++IR + +F+ +C + E+TLQP+RRY DAAILFSDIL I
Sbjct: 22 PVWMMRQAGRYLPEYKKIRAQAGDFMSLCKNTQLACEVTLQPLRRYPLDAAILFSDILTI 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGP+ PI + +I L P+ + L Y++ + +++ RK+L
Sbjct: 82 PDAMGLGLYFTTGEGPKFHFPIRMKADIEKLPIPDPEKELRYVMDLARTV---RKELAGT 138
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A+YM+ GG K + + Y + LL+ L+ YL AQI
Sbjct: 139 VPLIGFAGSPWTIATYMVEGGSSKIFSRLKAMLYTEPATLHLLLNKLTQTVILYLNAQIQ 198
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AGV I IFDT G L + ++ + +II + R+ K F KG G L+
Sbjct: 199 AGVQSIMIFDTWGGVLSGENYRIFSLNYMHQIIEGLTRENEGCKIPVTLFTKGGGQWLEA 258
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
T +AIGLDW+ + A + + +QGN+DP L ++ V +IL G
Sbjct: 259 IAE-TGCDAIGLDWTTDIGEARHRVGDKVALQGNMDPAVLYAPAPIIEKEVASILGAFGK 317
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G IFNLGHG+ P++V V V
Sbjct: 318 GTGHIFNLGHGVHQDTPPEHVRIFVDAVH 346
>gi|294341891|emb|CAZ90320.1| Uroporphyrinogen decarboxylase (URO-D) (UPD) [Thiomonas sp. 3As]
Length = 364
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 189/351 (53%), Gaps = 19/351 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+ RY
Sbjct: 11 LRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAQNPHFATEVTLQPLDRYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL + DA+G +RF EGP+ D P+ ++ L P++D L Y +F
Sbjct: 71 DAAILFSDILTVPDAMGLGLRFEAGEGPKFDRPLRSEADVAALAVPDMDK-LRY---VFD 126
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++S +R+ L + LIGF G+PWT+A YM+ GG D+ + Y + +L
Sbjct: 127 AVSEIRRALVQNGTQRVPLIGFSGSPWTLACYMVEGGGSDDYRTVKTMLYSRPDLMHRIL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--YPN 239
++ A+YL AQI AG + IFD+ G L + F+ ++ ++I+A+++K +
Sbjct: 187 AVNAEAVAQYLAAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYSQQVIAALKQKASLAD 246
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
I F KG G L+ T ++A+GLDW+ L+ A L + +QGNLDP L
Sbjct: 247 VPVILFTKGGGQWLEAMAD-TGADALGLDWTTSLAKARALVGQRVALQGNLDPNVLFAPP 305
Query: 299 QVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHGI+ P++V LV+ V +
Sbjct: 306 AAIEKEVQRLLHSFGPVGAGAGHVFNLGHGISQFTPPEHVSALVEAVHTHS 356
>gi|16762290|ref|NP_457907.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143778|ref|NP_807120.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|168264577|ref|ZP_02686550.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205354431|ref|YP_002228232.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859345|ref|YP_002245996.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213051529|ref|ZP_03344407.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213428482|ref|ZP_03361232.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213647195|ref|ZP_03377248.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213854790|ref|ZP_03383030.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289826724|ref|ZP_06545689.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|23813998|sp|Q8Z329|DCUP_SALTI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696380|sp|B5QYF2|DCUP_SALEP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696381|sp|B5RFI7|DCUP_SALG2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|25291021|pir||AC0932 uroporphyrinogen decarboxylase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504594|emb|CAD09477.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139413|gb|AAO70980.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|205274212|emb|CAR39230.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205346991|gb|EDZ33622.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711148|emb|CAR35522.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326629563|gb|EGE35906.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 354
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|303322913|ref|XP_003071448.1| uroporphyrinogen decarboxylase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240111150|gb|EER29303.1| uroporphyrinogen decarboxylase, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 365
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 186/345 (53%), Gaps = 24/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ +G + PPIW+MRQAGRYLPEY + K ++F + C PE LTLQPI RY
Sbjct: 13 LLKAARGEKVQRPPIWIMRQAGRYLPEYHEA-KGTRDFFECCRDPEVASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V VE +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVKAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYKYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA------ 232
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + R I+A
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYL-RYIAANLPKRV 247
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPVQGNLDP 291
V Y FAKGA Y L + + + N +GLDW P +QGN DP
Sbjct: 248 VELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G G +I NLGHGITP V+P+++
Sbjct: 307 GCLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDL 351
>gi|19921920|ref|NP_610501.1| updo, isoform A [Drosophila melanogaster]
gi|8928075|sp|Q9V595|DCUP_DROME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7303877|gb|AAF58922.1| updo, isoform A [Drosophila melanogaster]
gi|201066011|gb|ACH92415.1| FI07665p [Drosophila melanogaster]
Length = 356
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 248 IPVVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVHK 354
>gi|37524498|ref|NP_927842.1| uroporphyrinogen decarboxylase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|45476834|sp|Q7N960|DCUP_PHOLL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|36783922|emb|CAE12784.1| uroporphyrinogen decarboxylase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 354
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 188/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R K +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQSVDVTPVWMMRQAGRYLPEYQATRAKAGDFIALCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
+RY DAAILFSDIL I DA+G + F EGPR P+ ++ L P+ ++ L+Y
Sbjct: 65 QRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKSPVFSRADVEKLPVPDPEMELSY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VTDAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPTVMHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLIRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FAKG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFAKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ IL G+G +FNLGHGI + P++ V+ V
Sbjct: 301 PERIEQEVSTILQGFGTGSGHVFNLGHGIHQDILPEHAGVFVEAV 345
>gi|221330099|ref|NP_001137627.1| updo, isoform B [Drosophila melanogaster]
gi|220902150|gb|ACL83081.1| updo, isoform B [Drosophila melanogaster]
Length = 379
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 34 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKH-HDFFTVCRTPELACEVTMQPL 92
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 93 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 150
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 151 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 210
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 211 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKA 270
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 271 IPVVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMY 329
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 330 RDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVHK 377
>gi|209364185|ref|YP_001425146.2| uroporphyrinogen decarboxylase [Coxiella burnetii Dugway 5J108-111]
gi|207082118|gb|ABS77403.2| uroporphyrinogen decarboxylase [Coxiella burnetii Dugway 5J108-111]
Length = 402
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 192/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 46 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + Q++ L P ++ L+YL
Sbjct: 106 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 165
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 166 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 222
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 223 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 282
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 283 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 341
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 342 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 391
>gi|168234411|ref|ZP_02659469.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194469767|ref|ZP_03075751.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194456131|gb|EDX44970.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205331648|gb|EDZ18412.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 354
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 SDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|89075372|ref|ZP_01161794.1| uroporphyrinogen decarboxylase [Photobacterium sp. SKA34]
gi|89048921|gb|EAR54490.1| uroporphyrinogen decarboxylase [Photobacterium sp. SKA34]
Length = 355
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 189/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLSALLKQPVDYTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP++R+ DAAILFSDIL I DA+G + F EGP+ PIT + +I L +P +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPITCKADVDKIGLPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRHDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 176 QTLRLLLDKLADSVTEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T + +GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 295 SMLYAQPERIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|90581308|ref|ZP_01237105.1| uroporphyrinogen decarboxylase [Vibrio angustum S14]
gi|90437547|gb|EAS62741.1| uroporphyrinogen decarboxylase [Vibrio angustum S14]
Length = 355
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 190/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP++R+ DAAILFSDIL I DA+G + F EGP+ PIT + +I L +P +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPITCKADVDKIGLPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRHDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 176 QTLHLLLDKLADSVTEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T + +GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 295 SMLYAQPERIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|21430840|gb|AAM51098.1| SD19419p [Drosophila melanogaster]
Length = 356
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V PL + +QGNLDP +
Sbjct: 248 IPVVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 307 RDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVHK 354
>gi|145588217|ref|YP_001154814.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046623|gb|ABP33250.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 369
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 187/357 (52%), Gaps = 25/357 (7%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L+ G ++ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY
Sbjct: 6 RFLKACLGEAVDQTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRY 65
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL I DA+G ++F EGP + P+ T++ D ++ L +F+
Sbjct: 66 PLDAAILFSDILTIPDAMGLGLKFTAGEGPSFEHPLRTEDDVKKLRVAD--MDQLKYVFE 123
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++S +RK L + LIGF G+PWT+A YMI G D + + +L
Sbjct: 124 AVSEIRKALIQYGKQRVPLIGFSGSPWTLACYMIDGSSADDFRHAKTMMFSRPDLMQQIL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D A YLI Q+ AG + IFDT G L + ++ + ++ ++I+ + R+Y K
Sbjct: 184 DINIQSVANYLIEQVKAGAQALMIFDTWGGMLPDGWYQRVSLAAMQKVIALLPREYEGQK 243
Query: 242 F--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA----LELQKEGPVQGNLDPMRLV 295
I F KG L + ++ ++ I +DW++ LS A L L K +QGNLDP+ L
Sbjct: 244 IPVIMFTKGGAIWLNDMAQI-GADVIAMDWTMSLSRARKQLLALNKPLALQGNLDPLILF 302
Query: 296 VGNQVMIDGVNAILDVLGSGP-----------FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + +LD L S P IFNLGHGI+ P++V L + V
Sbjct: 303 SEPEQIARQASLLLDDLASAPPLKAGLHSLDGHIFNLGHGISQFTPPESVTALSQAV 359
>gi|238892472|ref|YP_002917206.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae NTUH-K2044]
gi|330005092|ref|ZP_08305102.1| uroporphyrinogen decarboxylase [Klebsiella sp. MS 92-3]
gi|238544788|dbj|BAH61139.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328536425|gb|EGF62778.1| uroporphyrinogen decarboxylase [Klebsiella sp. MS 92-3]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR P+ ++ L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPEQELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENEGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 301 APRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPEHAGVFVEAV 345
>gi|33598623|ref|NP_886266.1| uroporphyrinogen decarboxylase [Bordetella parapertussis 12822]
gi|45476877|sp|Q7W3B3|DCUP_BORPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33574752|emb|CAE39411.1| uroporphyrinogen decarboxylase [Bordetella parapertussis]
Length = 358
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 179/332 (53%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPLARYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F EGPR P+ + L P++D L Y +F ++ +R++L
Sbjct: 84 PHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPDMD-SLRY---VFDAVRTIRRELDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L+ ++ + YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMVEGRGSDDYRLIKSMLYGRPDLLHRILEINAEATRHYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ R++ + R+ + I F+KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRVPVIVFSKGGGQWLEE 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+A+GLDW+V L A + +QGNLDPM L G Q + LD
Sbjct: 260 I-AACGCDAVGLDWTVNLGTARRRVADAVALQGNLDPMTLFGGAQAVRAEARRTLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G G +FNLGHGI+ P+ V +LV V +
Sbjct: 319 VGKGGHVFNLGHGISQYSPPEVVSELVDEVHT 350
>gi|90413404|ref|ZP_01221397.1| uroporphyrinogen decarboxylase [Photobacterium profundum 3TCK]
gi|90325646|gb|EAS42115.1| uroporphyrinogen decarboxylase [Photobacterium profundum 3TCK]
Length = 355
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 189/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 176 TTLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +AIGLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENDGRRVPVTLFTKNGGMWLEQI-AATGCDAIGLDWTINIADANRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V ILD G +FNLGHGI V P+N V V
Sbjct: 295 SILYAQPERIRQEVATILDGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|156537506|ref|XP_001607401.1| PREDICTED: similar to ENSANGP00000021292 [Nasonia vitripennis]
Length = 874
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 190/354 (53%), Gaps = 22/354 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE+R++R K +F +C TP E+TLQPI
Sbjct: 528 QNDRILRAARGEPVDKVPVWIMRQAGRYLPEFRELRTKH-DFFSICQTPALACEITLQPI 586
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLN 118
+R+ DA+I+FSDILVI A+G V GP + DP + + P++D L
Sbjct: 587 KRFPLDASIIFSDILVIPQAMGLVVEMRPGVGPVLPEPLADPTHISRLKM--PDVDKDLG 644
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++I++ R L + LIGF GAPWT+ YMI GG Q R++ Y+ +
Sbjct: 645 Y---VGEAITLTRHSLEGKVPLIGFTGAPWTLMGYMIQGGGSSTMAQARIWLYKYPEESH 701
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY- 237
LL ++DV +YL+ Q+ AG ++Q+F++H L F+ Y+ + +I V+ K
Sbjct: 702 KLLQMITDVIVDYLVMQVKAGAQLLQVFESHGDFLNTELFKEYSLKYFKQISQKVKAKLD 761
Query: 238 ----PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNL 289
P I+F KGA ++ + + + IGLDW+V A Q+ GP +QGN+
Sbjct: 762 SLNIPKVPMIAFPKGATLDSIEIFAKEAGYDVIGLDWTVDPVEA--RQRVGPNITLQGNM 819
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
DP L + + ++ + G +I NLGHGI P +V ++ + S
Sbjct: 820 DPTALYSTTEKVRQRAENMVRLFGKDRYIANLGHGILPDAPIPSVEAFIEGIHS 873
>gi|284009056|emb|CBA76020.1| uroporphyrinogen decarboxylase [Arsenophonus nasoniae]
Length = 368
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 15/345 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L L ++ P+W+MRQAGRYLPEYR+IR++ +FL +C E E+TLQP+ R+
Sbjct: 22 RYLRALLRQPVDTTPVWMMRQAGRYLPEYRKIREQAGDFLSLCKNTELACEVTLQPLHRF 81
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLL 121
DAAILFSDIL I DA+G + F EGPR PI +++ + +P +L
Sbjct: 82 PLDAAILFSDILTIPDAMGLGLYFSVGEGPRFQRPIGCLADIEKLPIPDPEQELVY---- 137
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +RK L + LIGF G+PWT+A+YM+ GG K + + Y + + LL
Sbjct: 138 -VMNAIRAIRKALQGKVPLIGFSGSPWTLATYMVEGGSSKAFTRIKKLMYTEPKTLHLLL 196
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+ YL AQI AG + IFDT G L ++ ++ + +II ++ R++ K
Sbjct: 197 DKLTQSVILYLNAQIRAGAQSVMIFDTWGGVLTGRDYHQFSLHYMHQIIDSLLREHEGRK 256
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
F KG G L+ T +A+G+DW + A + + +QGN++P L
Sbjct: 257 VPVTLFTKGGGQWLEAMAA-TGCDALGIDWMTDIKEARSRVGDKVALQGNMEPSILYASK 315
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI + P++V + + +V
Sbjct: 316 ERIELEVKTILKQFGQGSGHVFNLGHGIHQDIPPEHVKNFINSVH 360
>gi|332159922|ref|YP_004296499.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664152|gb|ADZ40796.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 355
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VINAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-ATTGCDALGLDWTTDIADARRRVGDKVALQGNMDPSI 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V+ IL G G +FNLGHGI V P++ V+ V +
Sbjct: 297 LYAPAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVRAVHA 347
>gi|120613104|ref|YP_972782.1| uroporphyrinogen decarboxylase [Acidovorax citrulli AAC00-1]
gi|120591568|gb|ABM35008.1| uroporphyrinogen decarboxylase [Acidovorax citrulli AAC00-1]
Length = 379
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 27 PLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPLERFPLDAAILFSDILTV 86
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P+++ L Y +F +++ +R+ L
Sbjct: 87 PDAMGLGLSFAEGEGPRFARVVRDEAAVAELAVPDMEK-LRY---VFDAVTSIRRALDGR 142
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 143 VPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRILAINADAVAAYLNAQID 202
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + I F KG L+
Sbjct: 203 AGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDVPRIVFTKGGALWLE 262
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + L D +GLDW+ L+ A L GP +QGN+DP L + + A+
Sbjct: 263 DMKGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVLFAPPEAIAAQARAV 321
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 322 LDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 367
>gi|168245123|ref|ZP_02670055.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450980|ref|YP_002048152.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|238058107|sp|B4TCT6|DCUP_SALHS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194409284|gb|ACF69503.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336123|gb|EDZ22887.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKGDVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|194445303|ref|YP_002043415.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197263727|ref|ZP_03163801.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200388307|ref|ZP_03214919.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|238058108|sp|B4T0Z9|DCUP_SALNS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194403966|gb|ACF64188.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197241982|gb|EDY24602.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|199605405|gb|EDZ03950.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|183597474|ref|ZP_02958967.1| hypothetical protein PROSTU_00749 [Providencia stuartii ATCC 25827]
gi|188023224|gb|EDU61264.1| hypothetical protein PROSTU_00749 [Providencia stuartii ATCC 25827]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 186/347 (53%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDTTPVWMMRQAGRYLPEYKATRAQAGDFISLCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGPR PIT + I + +P ++L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKPITCLNDIKNIPVPDPEMELGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ A +
Sbjct: 124 ----VMDAVRAIRKALKGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG I IFDT G L + ++ ++ + +II + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSIMIFDTWGGVLTKRDYLQFSLHYMHKIIDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRCVPVTLFTKGGGQWLEEM-AATGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APIPRIEEEVQNILAGFGQGNGHVFNLGHGIHQDVPPEHAGAFVDAV 345
>gi|33603574|ref|NP_891134.1| uroporphyrinogen decarboxylase [Bordetella bronchiseptica RB50]
gi|45476881|sp|Q7WEN2|DCUP_BORBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33577699|emb|CAE34964.1| uroporphyrinogen decarboxylase [Bordetella bronchiseptica RB50]
Length = 358
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 178/332 (53%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPLARYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F EGPR P+ + L P++D L Y +F ++ +R++L
Sbjct: 84 PHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPDMD-SLRY---VFDAVRTIRRELDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L+ ++ + YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMVEGRGSDDYRLIKSMLYGRPDLLHRILEINAEATRHYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ R++ + R+ + I F KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRVPVIVFTKGGGQWLEE 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+A+GLDW+V L A + +QGNLDPM L G Q + LD
Sbjct: 260 I-AACGCDAVGLDWTVNLGTARRRVADAVALQGNLDPMTLFGGAQAVRAEARRTLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G G +FNLGHGI+ P+ V +LV V +
Sbjct: 319 VGKGGHVFNLGHGISQYSPPEVVSELVDEVHT 350
>gi|261209795|ref|ZP_05924098.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC341]
gi|260841151|gb|EEX67668.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC341]
Length = 356
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 192/354 (54%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSDP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 176 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENDGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 295 SILYAPAPRIREEVASILAGFGQGDTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|168823119|ref|ZP_02835119.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205340574|gb|EDZ27338.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088597|emb|CBY98356.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|261249271|emb|CBG27133.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 354
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGYKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|182414510|ref|YP_001819576.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
gi|177841724|gb|ACB75976.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
Length = 342
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 197/349 (56%), Gaps = 11/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R ++ L ++ PP+W+MRQAGRYLPEYR ++ + +FL+M TP E+TL
Sbjct: 1 MNSR-ERFLAACACQPLDRPPLWIMRQAGRYLPEYRALKAR-SSFLEMVRTPSLAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLN 118
QP+ R+ DAAILFSDILVI +ALG+ RF + G M+ T +I L P +
Sbjct: 59 QPLHRFALDAAILFSDILVIPEALGQGYRFRDEGGIAMEFRLENTAQIDALAPA-NAVPE 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++++L+K+L + L+GF G+PWT+A+YM+ GG ++ + + Y + F+
Sbjct: 118 RLRYVADTLALLKKELAGNKALLGFGGSPWTLATYMVEGGSSEEFERIKQLFYTDRPTFD 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ Y QI AGVD IQIFD+ G + ++E + + + RI++A+ R +P
Sbjct: 178 QLLEKLTAALIAYFRMQIAAGVDAIQIFDSWGGIIAGPDYEAASLQWIRRIVTALPRDFP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
I +AKG L + + + + +DW+ L+ L VQGNLDP+ L
Sbjct: 238 ---IILYAKGTAPQLMD-QAFCGARVLSVDWTNDLAIVRRTLPGNVAVQGNLDPVLLNTT 293
Query: 298 NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ +L+ + G+ IFNLGHGI PQ + V LV TV + K
Sbjct: 294 PAIVQRETARLLESMRGTAGHIFNLGHGILPQARLECVEALVTTVTTWK 342
>gi|300721649|ref|YP_003710924.1| uroporphyrinogen decarboxylase [Xenorhabdus nematophila ATCC 19061]
gi|297628141|emb|CBJ88692.1| uroporphyrinogen decarboxylase [Xenorhabdus nematophila ATCC 19061]
Length = 354
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 191/352 (54%), Gaps = 16/352 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R++ +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRQEAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-----MDPITTQEIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F EGPR M+ +++ + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFHAPVMNHADVEKLPVPDPEQE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y++ ++I RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LGYVMAAVRAI---RKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKAMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L++ YL AQI AG + IFDT G L ++ ++ + +I+ +
Sbjct: 176 ATLHLLLDKLANSVILYLNAQIKAGAQSVMIFDTWGGVLSHRDYLEFSLHYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R++ + F KG G L+ T +A+GLDW ++ A + + +QGN+DP
Sbjct: 236 REHEGRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWITNIADARRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V+ IL G+G +FNLGHGI V P++ V+ V
Sbjct: 295 SMLYAAPARIEEEVSTILHDFGAGAGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|325265966|ref|ZP_08132652.1| uroporphyrinogen decarboxylase [Kingella denitrificans ATCC 33394]
gi|324982604|gb|EGC18230.1| uroporphyrinogen decarboxylase [Kingella denitrificans ATCC 33394]
Length = 354
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 177/330 (53%), Gaps = 12/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR+ R + F+D+C E E+TLQPI RY+ DAAILFSDIL +
Sbjct: 22 PIWMMRQAGRYLPEYRETRARAGGFMDLCKNTELATEVTLQPIDRYDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGP+ P+ T+ L P+ +N L +F ++S +RK L
Sbjct: 82 PDAMGLGLYFEAGEGPKFQKPVQTEADVAALRVPD----MNDLRYVFDAVSSIRKALDGR 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ GG K+ + Y + +L + +YL QI
Sbjct: 138 VPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILHVNAQAVTQYLNTQIE 197
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
G +QIFDT G L F+ ++ + +II + R++ + I FAKG G L+
Sbjct: 198 QGAQAVQIFDTWGGVLSHAAFQEFSLAYIKQIIGGLIREHDGRRVPVIVFAKGGGQWLEL 257
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++A+GLDW+ ++ A + + +QGN DP L + + IL G
Sbjct: 258 MAE-CGADALGLDWTTDIAQARARVGGKVALQGNFDPFALFGTPGRIREEAAQILAGFGK 316
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +FNLGHGI DP++ L+ V
Sbjct: 317 GSGHVFNLGHGINQHTDPEHAKVLIDAVHE 346
>gi|254292048|ref|ZP_04962825.1| uroporphyrinogen decarboxylase [Vibrio cholerae AM-19226]
gi|150422034|gb|EDN14004.1| uroporphyrinogen decarboxylase [Vibrio cholerae AM-19226]
Length = 359
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRTQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 TVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|727241|gb|AAA64267.1| uroporphyrinogen decarboxylase-like protein [Caulobacter crescentus
CB15]
Length = 294
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 156/285 (54%), Gaps = 3/285 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP+RR+
Sbjct: 13 KFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQPMRRF 72
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FDA+I+F+DIL+I ALG+ V F EGP++ + + E + L + ++
Sbjct: 73 PFDASIVFADILLIPGALGQKVWFEAGEGPKLGDMPSVES--MAEKAGEAGKALSLVGET 130
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+ L D
Sbjct: 131 LTRVRSALDPDKALIGFAGAPWTVATYMIEKGS-SDRSGARTFAYQNPETLDALIQVLVD 189
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +YL Q+ AG +++F++ A L E FE + RII +R + I F
Sbjct: 190 ATIDYLAMQVDAGAQALKLFESWAEGLSEPLFEPLVTQPHIRIIEGLRARGVTVPIIGFP 249
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDP 291
+GAG ++++Y T + LD S +QK +QG LDP
Sbjct: 250 RGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDP 294
>gi|198242852|ref|YP_002218083.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226696379|sp|B5FQL2|DCUP_SALDC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197937368|gb|ACH74701.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326625876|gb|EGE32221.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 354
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 187/350 (53%), Gaps = 12/350 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRCVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|59713009|ref|YP_205785.1| uroporphyrinogen decarboxylase [Vibrio fischeri ES114]
gi|197335479|ref|YP_002157194.1| uroporphyrinogen decarboxylase [Vibrio fischeri MJ11]
gi|75506900|sp|Q5E249|DCUP_VIBF1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696383|sp|B5FC78|DCUP_VIBFM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|59481110|gb|AAW86897.1| uroporphyrinogen decarboxylase [Vibrio fischeri ES114]
gi|197316969|gb|ACH66416.1| uroporphyrinogen decarboxylase [Vibrio fischeri MJ11]
Length = 355
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 188/349 (53%), Gaps = 16/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLESI-AATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL+ G +FNLGHGI V P+N V V
Sbjct: 299 AQPERIRQEVGTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVH 347
>gi|171769243|sp|A1TVM0|DCUP_ACIAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 376
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P+++ L Y +F +++ +R+ L
Sbjct: 84 PDAMGLGLSFAEGEGPRFARVVRDEAAVAELAVPDMEK-LRY---VFDAVTSIRRALDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRILAINADAVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + I F KG L+
Sbjct: 200 AGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDVPRIVFTKGGALWLE 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + L D +GLDW+ L+ A L GP +QGN+DP L + + A+
Sbjct: 260 DMKGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVLFAPPEAIAAQARAV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 319 LDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 364
>gi|15834174|ref|NP_312947.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
Sakai]
gi|168752038|ref|ZP_02777060.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4113]
gi|168758607|ref|ZP_02783614.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4401]
gi|168764577|ref|ZP_02789584.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4501]
gi|168771469|ref|ZP_02796476.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4486]
gi|168777390|ref|ZP_02802397.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4196]
gi|168780382|ref|ZP_02805389.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4076]
gi|168790357|ref|ZP_02815364.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC869]
gi|168798369|ref|ZP_02823376.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC508]
gi|195939623|ref|ZP_03085005.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4024]
gi|208808730|ref|ZP_03251067.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4206]
gi|208813578|ref|ZP_03254907.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4045]
gi|208818935|ref|ZP_03259255.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4042]
gi|209398331|ref|YP_002273513.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4115]
gi|217326346|ref|ZP_03442430.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14588]
gi|254795995|ref|YP_003080832.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14359]
gi|261227291|ref|ZP_05941572.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257038|ref|ZP_05949571.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
FRIK966]
gi|23813992|sp|Q8X6X5|DCUP_ECO57 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696374|sp|B5Z093|DCUP_ECO5E RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13364396|dbj|BAB38343.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
Sakai]
gi|187767364|gb|EDU31208.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4196]
gi|188014036|gb|EDU52158.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4113]
gi|189001799|gb|EDU70785.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4076]
gi|189354597|gb|EDU73016.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4401]
gi|189359758|gb|EDU78177.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4486]
gi|189365451|gb|EDU83867.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4501]
gi|189370169|gb|EDU88585.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC869]
gi|189379217|gb|EDU97633.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC508]
gi|208728531|gb|EDZ78132.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4206]
gi|208734855|gb|EDZ83542.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4045]
gi|208739058|gb|EDZ86740.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4042]
gi|209159731|gb|ACI37164.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4115]
gi|209751708|gb|ACI74161.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751710|gb|ACI74162.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751712|gb|ACI74163.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751716|gb|ACI74165.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|217322567|gb|EEC30991.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14588]
gi|254595395|gb|ACT74756.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14359]
gi|320190906|gb|EFW65556.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
EC1212]
gi|320639088|gb|EFX08728.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
G5101]
gi|320644482|gb|EFX13545.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H- str.
493-89]
gi|320649801|gb|EFX18322.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H- str. H
2687]
gi|320665896|gb|EFX32927.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
LSU-61]
gi|326347152|gb|EGD70882.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
1125]
gi|326347597|gb|EGD71319.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
1044]
Length = 354
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ A YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|113869569|ref|YP_728058.1| uroporphyrinogen decarboxylase [Ralstonia eutropha H16]
gi|113528345|emb|CAJ94690.1| uroporphyrinogen decarboxylase [Ralstonia eutropha H16]
Length = 365
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 184/337 (54%), Gaps = 23/337 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ T+ L P++ L Y +F ++S +R+ L
Sbjct: 84 PDAMGLGLSFAQGEGPRFAHPLRTEADVQKLAVPDM-ASLQY---VFDAVSEIRRALVQD 139
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + EYL
Sbjct: 140 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILEINAQAVTEYLN 199
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGY 251
AQI AG + IFDT G L + ++ ++ + R+++ ++R++ + I F KG G
Sbjct: 200 AQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHDGQQVPAIVFTKGGGL 259
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAI 308
L+ T ++AIGLDW+V L+ A ++ G +QGN+DP L + + V +
Sbjct: 260 WLEALAD-TGADAIGLDWTVNLAEA--RRRTGGRVALQGNIDPTVLFAPEAAIREQVRGV 316
Query: 309 LDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
LD GS +FNLGHGI+ P NV LV V
Sbjct: 317 LDSYAAAGGSDGHVFNLGHGISQFTPPDNVSVLVDEV 353
>gi|318607527|emb|CBY29025.1| uroporphyrinogen III decarboxylase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|330863071|emb|CBX73202.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica W22703]
Length = 365
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 189/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 11 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 70
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 71 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 130
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 131 LGY---VINAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 187
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 188 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIRE 247
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 248 NDGRRVPVTLFTKGGGQWLEAM-ATTGCDALGLDWTTDIADARRRVGDKVALQGNMDPSI 306
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V+ IL G G +FNLGHGI V P++ V+ V +
Sbjct: 307 LYAPAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVRAVHA 357
>gi|153827143|ref|ZP_01979810.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-2]
gi|149738971|gb|EDM53287.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-2]
Length = 359
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|15640359|ref|NP_229986.1| uroporphyrinogen decarboxylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591006|ref|ZP_01678324.1| uroporphyrinogen decarboxylase [Vibrio cholerae 2740-80]
gi|147675642|ref|YP_001218600.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|153819680|ref|ZP_01972347.1| uroporphyrinogen decarboxylase [Vibrio cholerae NCTC 8457]
gi|153823152|ref|ZP_01975819.1| uroporphyrinogen decarboxylase [Vibrio cholerae B33]
gi|227080544|ref|YP_002809095.1| uroporphyrinogen decarboxylase [Vibrio cholerae M66-2]
gi|229506873|ref|ZP_04396381.1| uroporphyrinogen III decarboxylase [Vibrio cholerae BX 330286]
gi|229508678|ref|ZP_04398172.1| uroporphyrinogen III decarboxylase [Vibrio cholerae B33]
gi|229516060|ref|ZP_04405511.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC9]
gi|229606387|ref|YP_002877035.1| uroporphyrinogen decarboxylase [Vibrio cholerae MJ-1236]
gi|254851641|ref|ZP_05240991.1| uroporphyrinogen decarboxylase [Vibrio cholerae MO10]
gi|298501294|ref|ZP_07011091.1| uroporphyrinogen decarboxylase [Vibrio cholerae MAK 757]
gi|9654747|gb|AAF93505.1| uroporphyrinogen decarboxylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547147|gb|EAX57277.1| uroporphyrinogen decarboxylase [Vibrio cholerae 2740-80]
gi|126509768|gb|EAZ72362.1| uroporphyrinogen decarboxylase [Vibrio cholerae NCTC 8457]
gi|126519339|gb|EAZ76562.1| uroporphyrinogen decarboxylase [Vibrio cholerae B33]
gi|146317525|gb|ABQ22064.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|227008432|gb|ACP04644.1| uroporphyrinogen decarboxylase [Vibrio cholerae M66-2]
gi|227012188|gb|ACP08398.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|229346963|gb|EEO11930.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC9]
gi|229354313|gb|EEO19242.1| uroporphyrinogen III decarboxylase [Vibrio cholerae B33]
gi|229355978|gb|EEO20897.1| uroporphyrinogen III decarboxylase [Vibrio cholerae BX 330286]
gi|229369042|gb|ACQ59465.1| uroporphyrinogen III decarboxylase [Vibrio cholerae MJ-1236]
gi|254847346|gb|EET25760.1| uroporphyrinogen decarboxylase [Vibrio cholerae MO10]
gi|297539985|gb|EFH76049.1| uroporphyrinogen decarboxylase [Vibrio cholerae MAK 757]
Length = 359
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 TVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|118363416|ref|XP_001014753.1| uroporphyrinogen decarboxylase family protein [Tetrahymena
thermophila]
gi|89296700|gb|EAR94688.1| uroporphyrinogen decarboxylase family protein [Tetrahymena
thermophila SB210]
Length = 398
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 177/328 (53%), Gaps = 12/328 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V++ I+ PIW+MRQAGRYLPE+R++RK + +F ++C P E+TLQP+ R+
Sbjct: 58 LLRVIKREKIDHLPIWVMRQAGRYLPEFREVRKIW-SFFELCDNPLLAAEVTLQPLERFP 116
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGP-----RMDPITTQEIYLLNPNIDLFLNYLLP 122
DA I+FSDILV+ +G V E GP ++P Q++ + +P L
Sbjct: 117 MDAGIIFSDILVVPKVMGMEVIMEEKRGPVFPQPLVEPSDLQKLSIPDPE------SLGD 170
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ ++ + R+ + +T IGF GAPWT+ SYMI GG K + + + ++ LL
Sbjct: 171 VYDALYLFRQAVEGKVTTIGFAGAPWTLMSYMIEGGGSKMFSKVKKWIFKWKEESKKLLS 230
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+SDV EY+ QI G +IQ+FD+ AG LG ++ + R+ + V++++P
Sbjct: 231 MISDVLIEYISKQIEGGAQIIQLFDSWAGELGHEDYWEFGLSYCVRVATEVKKRHPETPI 290
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I FAKG + D I W + L+ Q +QGNLDP L+ +
Sbjct: 291 IMFAKGNHSDMVFKHDCFDCVGIDYAWDLSLAAKYSQQYNKVIQGNLDPGVLLAEKDTIR 350
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVD 330
+ ++D++G +I NLGHG+ P+ D
Sbjct: 351 EKTRKMIDIVGVDRYIVNLGHGMWPEHD 378
>gi|296139601|ref|YP_003646844.1| uroporphyrinogen decarboxylase [Tsukamurella paurometabola DSM
20162]
gi|296027735|gb|ADG78505.1| uroporphyrinogen decarboxylase [Tsukamurella paurometabola DSM
20162]
Length = 357
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 19/346 (5%)
Query: 11 VLQGNVINPP---PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L PP P+W MRQAGR LPEYR++R+ L C+ PE E+TLQP+RR+
Sbjct: 17 LLAAAAGQPPARRPVWFMRQAGRSLPEYRKVREGV-GMLQSCFMPELVSEITLQPVRRHR 75
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP ++ P+ P++D + P+ ++
Sbjct: 76 TDAAILFSDIVVPLKAAGIDLDIVSGIGPVIEQPVRDAAAVAAMPSLDA--EQVEPVAEA 133
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +LR +LP+ + LIGF GAP+T+ASY++ GG ++H + + Y + ++ LLD L+D
Sbjct: 134 VRMLRTELPDGVALIGFAGAPFTLASYLVEGGPSRNHERTKALMYTDPTTWHALLDQLAD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ +L Q +AGV Q+FD+ AG L ++ Y R+ +A+R F
Sbjct: 194 IAITFLSVQANAGVQAFQLFDSWAGALSLADYREYVLPHSARVFAALRETGTALPGFHFG 253
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMID 303
G G +L ++ +G+DW VPL A ++ GP +QGNLDP L +++
Sbjct: 254 VGTGELLGAMGE-AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAALASSWEMVEA 310
Query: 304 GVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + + +FNLGHG+ P DP+ + +V+ V S
Sbjct: 311 QVRRVCADADAAVAAGATGHVFNLGHGVLPSTDPEVLTRVVELVHS 356
>gi|153802853|ref|ZP_01957439.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-3]
gi|153830716|ref|ZP_01983383.1| uroporphyrinogen decarboxylase [Vibrio cholerae 623-39]
gi|254227008|ref|ZP_04920569.1| uroporphyrinogen decarboxylase [Vibrio cholerae V51]
gi|124121608|gb|EAY40351.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-3]
gi|125620470|gb|EAZ48843.1| uroporphyrinogen decarboxylase [Vibrio cholerae V51]
gi|148873796|gb|EDL71931.1| uroporphyrinogen decarboxylase [Vibrio cholerae 623-39]
Length = 359
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|332345987|gb|AEE59321.1| uroporphyrinogen decarboxylase HemE [Escherichia coli UMNK88]
Length = 354
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ VK V
Sbjct: 297 LYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVKAV 345
>gi|219848203|ref|YP_002462636.1| uroporphyrinogen decarboxylase [Chloroflexus aggregans DSM 9485]
gi|254767690|sp|B8G821|DCUP_CHLAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|219542462|gb|ACL24200.1| uroporphyrinogen decarboxylase [Chloroflexus aggregans DSM 9485]
Length = 356
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 197/346 (56%), Gaps = 13/346 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ PIWLMRQAGRY+PEYR +R+++ FL M TPE E+TLQPI
Sbjct: 2 RDRFLRACRRQPVDRTPIWLMRQAGRYMPEYRAVRERY-GFLQMVKTPEIAAEVTLQPIA 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNP-NIDLFLNYLL 121
+ DAAI+F+DIL + LG + + + EGP + +PI ++ L+P + + Y L
Sbjct: 61 AFGVDAAIIFADILPPLEGLGLRLTYEKGEGPVIHNPIRHPHDVATLHPCDPRETVAYTL 120
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ +++++L N + LIGF GAP+T+ASY I GG K++ + F Y+ A++ L+
Sbjct: 121 ---DAVRLVKREL-NGLPLIGFSGAPFTLASYAIEGGGSKEYRLTKRFMYEQPTAWHDLM 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L + AEYLIAQ+ AG D +QIFD+ AG L ++ Y R +++ VR + A
Sbjct: 177 ERLGTLVAEYLIAQVEAGADAVQIFDSWAGTLAPADYRAYVLRHTQNVVATVRARLGAAA 236
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F + R+L ++ +G+DW + L A + E VQGNLDPM L
Sbjct: 237 PPIIYFGTDMAGLAGELRQL-GTDVLGVDWRIDLDVAWAQYGYEHAVQGNLDPMTLFAPP 295
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ IL G P IFNLGHGI + ++V LV+ V+S
Sbjct: 296 ELIASRAREILQRAGGRPGHIFNLGHGILTETPVEHVRYLVEFVQS 341
>gi|226226543|ref|YP_002760649.1| uroporphyrinogen decarboxylase [Gemmatimonas aurantiaca T-27]
gi|226089734|dbj|BAH38179.1| uroporphyrinogen decarboxylase [Gemmatimonas aurantiaca T-27]
Length = 351
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 182/343 (53%), Gaps = 15/343 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+ ++ PP+W+MRQAGRYLP+YR +R +FL MC TPE VE+TLQP+
Sbjct: 5 LLRALRREPVSRPPVWMMRQAGRYLPQYRAVRAG-SDFLTMCRTPELAVEVTLQPVDLIG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI +A+G ++ E GP+ P + ++P L Y+L
Sbjct: 64 VDAAIIFSDILVIPEAMGMHLTLDEGVGPQFPSPLRTPADVARLRTVDPEDQL--RYML- 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ + R+ L N + LIGF GAPWT+A+YM+ G K + ++ + LLD
Sbjct: 121 --DALRLARRALNNRVPLIGFAGAPWTLAAYMVEGKGTKQFAVAKRMLFEQPAMAHALLD 178
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ ++L+AQ+ AG V+Q+F++ AG L EF + + + +A R +
Sbjct: 179 RLATAVGDFLVAQVAAGAQVVQLFESWAGALSPQEFRTFVLPYLTK--AARRAREAGVPV 236
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQK-EGPVQGNLDPMRLVVGNQV 300
I FA GA + L T ++A+G+DW + P +L +QGNLDP L
Sbjct: 237 IVFAPGASWALGEIAAATGADAVGVDWHTTPAQARRQLAPFNVAMQGNLDPCALYATPAE 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +A++ G + NLGHGI P V P + V V+
Sbjct: 297 IRARAHAMIAEFGPIGHVANLGHGILPDVPPAHAKAFVDAVKE 339
>gi|206578510|ref|YP_002241062.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae 342]
gi|288937707|ref|YP_003441766.1| uroporphyrinogen decarboxylase [Klebsiella variicola At-22]
gi|290513215|ref|ZP_06552576.1| uroporphyrinogen decarboxylase [Klebsiella sp. 1_1_55]
gi|226697476|sp|B5XYE1|DCUP_KLEP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|206567568|gb|ACI09344.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae 342]
gi|288892416|gb|ADC60734.1| uroporphyrinogen decarboxylase [Klebsiella variicola At-22]
gi|289774312|gb|EFD82319.1| uroporphyrinogen decarboxylase [Klebsiella sp. 1_1_55]
Length = 354
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIKSKADVDKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LL+ L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLEKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 297 LYAPAPRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPQHAGVFVEAV 345
>gi|168239593|ref|ZP_02664651.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737614|ref|YP_002117068.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|238058110|sp|B4TQK7|DCUP_SALSV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194713116|gb|ACF92337.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197287730|gb|EDY27121.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 354
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 187/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPAPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|261254074|ref|ZP_05946647.1| uroporphyrinogen III decarboxylase [Vibrio orientalis CIP 102891]
gi|260937465|gb|EEX93454.1| uroporphyrinogen III decarboxylase [Vibrio orientalis CIP 102891]
Length = 355
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ + A++ + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 299 ASPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|262172570|ref|ZP_06040248.1| uroporphyrinogen III decarboxylase [Vibrio mimicus MB-451]
gi|261893646|gb|EEY39632.1| uroporphyrinogen III decarboxylase [Vibrio mimicus MB-451]
Length = 360
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|238760266|ref|ZP_04621410.1| Uroporphyrinogen decarboxylase [Yersinia aldovae ATCC 35236]
gi|238701530|gb|EEP94103.1| Uroporphyrinogen decarboxylase [Yersinia aldovae ATCC 35236]
Length = 355
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 188/351 (53%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I++ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVNGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHA 347
>gi|172044616|sp|Q0K5N1|DCUP_RALEH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 363
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 184/337 (54%), Gaps = 23/337 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 22 PLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ T+ L P++ L Y +F ++S +R+ L
Sbjct: 82 PDAMGLGLSFAQGEGPRFAHPLRTEADVQKLAVPDM-ASLQY---VFDAVSEIRRALVQD 137
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + EYL
Sbjct: 138 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILEINAQAVTEYLN 197
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGY 251
AQI AG + IFDT G L + ++ ++ + R+++ ++R++ + I F KG G
Sbjct: 198 AQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHDGQQVPAIVFTKGGGL 257
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAI 308
L+ T ++AIGLDW+V L+ A ++ G +QGN+DP L + + V +
Sbjct: 258 WLEALAD-TGADAIGLDWTVNLAEA--RRRTGGRVALQGNIDPTVLFAPEAAIREQVRGV 314
Query: 309 LDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
LD GS +FNLGHGI+ P NV LV V
Sbjct: 315 LDSYAAAGGSDGHVFNLGHGISQFTPPDNVSVLVDEV 351
>gi|121728881|ref|ZP_01681890.1| uroporphyrinogen decarboxylase [Vibrio cholerae V52]
gi|121628849|gb|EAX61309.1| uroporphyrinogen decarboxylase [Vibrio cholerae V52]
Length = 359
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPIFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 TVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|255747133|ref|ZP_05421076.1| uroporphyrinogen III decarboxylase [Vibrio cholera CIRS 101]
gi|262149009|ref|ZP_06028154.1| uroporphyrinogen III decarboxylase [Vibrio cholerae INDRE 91/1]
gi|262166941|ref|ZP_06034661.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC27]
gi|23814028|sp|Q9KV26|DCUP_VIBCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172047749|sp|A5F3N0|DCUP_VIBC3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|255735182|gb|EET90584.1| uroporphyrinogen III decarboxylase [Vibrio cholera CIRS 101]
gi|262024646|gb|EEY43327.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC27]
gi|262031199|gb|EEY49818.1| uroporphyrinogen III decarboxylase [Vibrio cholerae INDRE 91/1]
Length = 355
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 176 TVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 295 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|94266922|ref|ZP_01290576.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
gi|93452398|gb|EAT03015.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
Length = 345
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 194/340 (57%), Gaps = 14/340 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W+MRQAGRYLPEY +R+++ FL+MC TPE E+TLQP+
Sbjct: 6 LQACRGEPTDYTPVWMMRQAGRYLPEYHTVRRRY-TFLEMCRTPEAAAEVTLQPVDLIGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ +A+G + F+E +GP +P+ + L+ P+ + L Y +
Sbjct: 65 DAAILFSDILVLPEAMGAPLDFLEGKGPVFGEPVRDEAAVDRLIVPDPEEKLGY---VMA 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LR++L N + LIGF GAP+TVA+Y+I GG K+ + Y + LLD ++
Sbjct: 122 AIRLLRQELVNKVPLIGFAGAPFTVATYLIEGGSSKNFFLTKKMMYTAPELYGRLLDKIT 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + YL AQ AG +QIFD+ AG L +F +A RII+A+R I F
Sbjct: 182 EGTIAYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYAKRIIAALREAGVEVPLIYF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
A +L + ++ +GLDW + L A L GP +QGNLDP L++ M
Sbjct: 242 ANNGATLLPQCKD-CGADVLGLDWRINLDDAARLV--GPDISLQGNLDPCALLLPAAKME 298
Query: 303 DGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL+ + IFNLGHGI P++ P+ +V+TV
Sbjct: 299 ERVARILEQGKAARSHIFNLGHGILPEIPPEQAKMMVETV 338
>gi|330919208|ref|XP_003298518.1| hypothetical protein PTT_09266 [Pyrenophora teres f. teres 0-1]
gi|311328244|gb|EFQ93395.1| hypothetical protein PTT_09266 [Pyrenophora teres f. teres 0-1]
Length = 365
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/345 (37%), Positives = 186/345 (53%), Gaps = 23/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY + + K +F + C +PE LTLQPI RY
Sbjct: 13 ILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-HDFFECCRSPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ T +E+ ++ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPEPLQTPDDKQYKEVLEREVDVAESLD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 132 Y---VYKAITMTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPEETK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+ +A + I + +
Sbjct: 189 ALLKKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTCFKTFALPYLNHIADNLPARIK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPV-QGNLDP 291
+ FAKGA Y L + T+ N IGLDW P Q +G V QGN DP
Sbjct: 249 SKGLEPVPMTVFAKGAWYALSDLCD-TNYNTIGLDWLHAPAEAYKVAQAKGKVLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G G +I NLGHGITP V P ++
Sbjct: 308 GVLYGTRESITKVVEEMVAGFGGGKQGWIANLGHGITPFVKPDDL 352
>gi|260870708|ref|YP_003237110.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O111:H- str.
11128]
gi|257767064|dbj|BAI38559.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O111:H- str.
11128]
gi|323177552|gb|EFZ63137.1| uroporphyrinogen decarboxylase [Escherichia coli 1180]
Length = 354
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L ++LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVSLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|94264026|ref|ZP_01287826.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
gi|93455537|gb|EAT05724.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
Length = 398
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 194/340 (57%), Gaps = 14/340 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W+MRQAGRYLPEY +R+++ FL+MC TPE E+TLQP+
Sbjct: 59 LQACRGEPTDYTPVWMMRQAGRYLPEYHTVRRRY-TFLEMCRTPEAAAEVTLQPVDLIGV 117
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ +A+G + F+E +GP +P+ + L+ P+ + L Y +
Sbjct: 118 DAAILFSDILVLPEAMGAPLDFLEGKGPVFGEPVRDEAAVDRLIVPDPEEKLGY---VMA 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LR++L N + LIGF GAP+TVA+Y+I GG K+ + Y + LLD ++
Sbjct: 175 AIRLLRQELVNKVPLIGFAGAPFTVATYLIEGGSSKNFFLTKKMMYTAPELYARLLDKIT 234
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + YL AQ AG +QIFD+ AG L +F +A RII+A+R I F
Sbjct: 235 EGTIAYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYAKRIITALREAGVEVPLIYF 294
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
A +L + ++ +GLDW + L A L GP +QGNLDP L++ M
Sbjct: 295 ANNGATLLPQCKD-CGADVLGLDWRINLDDAARLV--GPDISLQGNLDPCALLLPAAKME 351
Query: 303 DGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL+ + IFNLGHGI P++ P+ +V+TV
Sbjct: 352 ERVARILEQGKAARSHIFNLGHGILPEIPPEQAKMMVETV 391
>gi|146298708|ref|YP_001193299.1| uroporphyrinogen decarboxylase [Flavobacterium johnsoniae UW101]
gi|189083006|sp|A5FLE7|DCUP_FLAJ1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146153126|gb|ABQ03980.1| uroporphyrinogen decarboxylase [Flavobacterium johnsoniae UW101]
Length = 341
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 191/340 (56%), Gaps = 19/340 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLPE+ ++R K+ +F C TPE E+T+QPIRR
Sbjct: 8 LKALKGETVQRPPVWMMRQAGRYLPEFIELRDKY-DFFTRCQTPELAAEITVQPIRRIAP 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV+ A+G V EN GP + +PI + Q +Y+ P+I L Y++
Sbjct: 67 DAAILFSDILVVPQAMGIEVLMKENIGPFIPNPIRSMADVQRVYV--PDIQESLGYVM-- 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + ++ L + + LIGF G+PWT+ Y + G K + F + N A + LL
Sbjct: 123 -DAIKLTKEMLNDEVPLIGFAGSPWTIFCYAVEGRGSKSFDMAKGFCFSNPVAAHTLLQK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL ++ AGVD +QIFD+ G L +++ ++ + + +I+ A+ P I
Sbjct: 182 ITDTTILYLKEKVKAGVDAVQIFDSWGGMLSPVDYQEFSWKYINQIVEALADLTP---VI 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F KG + L + + ++A+G+DW+ A L +QGN DP RL+ +
Sbjct: 239 VFGKGCWFALGEMGK-SRASALGVDWTCSARNARYLSGGNITLQGNFDPSRLLSPIPTIK 297
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQV---DPKNVLDLVK 339
V+ ++D G ++ NLGHGI P + K +D VK
Sbjct: 298 KMVHEMIDEFGKDKYVVNLGHGILPNIPVDHAKAFIDAVK 337
>gi|258620698|ref|ZP_05715733.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM573]
gi|258586896|gb|EEW11610.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM573]
Length = 356
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 176 AVLHALLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 295 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|218710875|ref|YP_002418496.1| uroporphyrinogen decarboxylase [Vibrio splendidus LGP32]
gi|218323894|emb|CAV20255.1| Uroporphyrinogen decarboxylase [Vibrio splendidus LGP32]
Length = 373
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 190/349 (54%), Gaps = 16/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 23 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 82
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PIT ++I L +P + L
Sbjct: 83 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVEKIGLPDPEGE--LQ 140
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 141 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLH 197
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 198 LLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENE 257
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 258 GRRVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSVLY 316
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V IL+ G G +FNLGHGI V P+N V V
Sbjct: 317 AQPERIREEVGTILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVDAVH 365
>gi|304415428|ref|ZP_07396079.1| uroporphyrinogen decarboxylase [Candidatus Regiella insecticola
LSR1]
gi|304282727|gb|EFL91239.1| uroporphyrinogen decarboxylase [Candidatus Regiella insecticola
LSR1]
Length = 383
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 198/354 (55%), Gaps = 15/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K + L L ++ P+W+MRQAGRYLPEY+ IRK+ NF+ +C PE E+T
Sbjct: 12 MNKLKNDRYLRALLRQPVDATPVWMMRQAGRYLPEYQDIRKQAGNFMSLCKNPELACEVT 71
Query: 60 LQPIRRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDL 115
+QP+RRY DAAI+FSDIL I DA+G + FVE EGPR D PIT + L +P+ +
Sbjct: 72 MQPLRRYPLLDAAIVFSDILTIPDAMGLGLYFVEGEGPRFDKPITCRADVEKLPDPDPEQ 131
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV--FAYQN 173
L Y + ++ +R +L LIGF G+PWT+A+YM+ GG K++ ++ +
Sbjct: 132 ELGY---VIDAVRKVRHELAGSRPLIGFSGSPWTLAAYMVEGGSSKNNNFTKIKKMMCDD 188
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ LL+ L+ +YL AQI AG + IFDT G L ++ +++ + +I+ +
Sbjct: 189 PESLKLLLEKLTKTVTQYLNAQIKAGAQSVMIFDTWGGLLTTKGYQTFSSHYMKKILKVL 248
Query: 234 --RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLD 290
+ F KG G+ L+ T +AIGLDW+ ++ A ++ + +QGN+D
Sbjct: 249 IGENEGRPVPVTLFTKGGGHWLEEIAS-TGCDAIGLDWTTDIASARRQVGDKVALQGNMD 307
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P L + + V++IL G G +FNLGHGI P+NV V TV S
Sbjct: 308 PHILCAQPERIRQEVSSILAGYGEGSGHVFNLGHGILQDTPPENVDVFVNTVHS 361
>gi|296414999|ref|XP_002837181.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633038|emb|CAZ81372.1| unnamed protein product [Tuber melanosporum]
Length = 363
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 188/341 (55%), Gaps = 19/341 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP+W+MRQAGRYLPEY Q+ K ++F +C PE +TLQPI RY
Sbjct: 13 ILRAARGEPVERPPMWVMRQAGRYLPEYNQV-KGGRDFFSVCRDPELASTITLQPILRYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI A+G V +E +GP +P+ E + L P +D+ L +
Sbjct: 72 NLIDAAIIFSDILVIPQAMGMTVEMLEAKGPHFPNPLRKPEDLSQLKPEVDVRAE-LAYV 130
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I + R+KL + LIGF GAPWT+ SYM+ GG K + + +++ A + LL
Sbjct: 131 FDAIRLTRRKLAGRVPLIGFVGAPWTLMSYMVEGGGSKTFMFVKTWIFKHPSATHSLLAR 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN- 239
++DV ++L Q+ AG ++Q+FD+ AG L H+F ++ R + + A R+
Sbjct: 191 ITDVCVDFLAYQVLAGAQMLQVFDSWAGELSPHDFRTFSLPYIRQISVRVPARVRELGGE 250
Query: 240 -AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
FAKGA Y L L +S +GLDW+ P S +QGN+DP L
Sbjct: 251 PVPMTIFAKGAWYALDE---LCESGYQVVGLDWTHDPESAVAIANGRVTLQGNMDPNVLY 307
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNV 334
G + + V I G G +I NLGHGITP VDP+++
Sbjct: 308 GGREAITRTVERIAKGFGGGRRGWIVNLGHGITPLVDPEDL 348
>gi|118618642|ref|YP_906974.1| uroporphyrinogen decarboxylase [Mycobacterium ulcerans Agy99]
gi|166234260|sp|A0PT34|DCUP_MYCUA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118570752|gb|ABL05503.1| uroporphyrinogen decarboxylase HemE [Mycobacterium ulcerans Agy99]
Length = 353
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 188/334 (56%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R++ + L C+ PE E+T+QPIRRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRRQ-HSMLAACFEPEVACEVTMQPIRRYHVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + P+ T ++ + P ID + P+ ++ +L +L
Sbjct: 84 LRAAGVDLDIVADVGPVIAAPVRTVADVDAIKP-IDS--QSIAPVLDAVELLVAEL-GDT 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + + ++ L+ L+D++ E+L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRHHARTKAMMLAEPATWHALMTKLTDLTIEFLLGQIRA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYMLKNY 256
GVD IQ+FD+ AG L ++ YA R+ + + P F + A+ G M +
Sbjct: 200 GVDAIQVFDSWAGMLSLADYRQYALPHSARVFATLAEHGVPMTHFGVGTAELLGAMSEAV 259
Query: 257 RRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ T + +G+DW L+ A +Q +QGNLDP+ L+ G + A++D
Sbjct: 260 KPGT-AKVVGVDWRTALADAAARVQPGTALQGNLDPVVLLAGWPAVERAARAVVDDGRRA 318
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ ++FNLGHG+ PQ DP + DLV V S
Sbjct: 319 VDAGAAGYVFNLGHGVLPQTDPGVLTDLVSLVHS 352
>gi|268593002|ref|ZP_06127223.1| uroporphyrinogen decarboxylase [Providencia rettgeri DSM 1131]
gi|291311475|gb|EFE51928.1| uroporphyrinogen decarboxylase [Providencia rettgeri DSM 1131]
Length = 354
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 185/347 (53%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFIALCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPR-----MDPITTQEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGPR M + I + +P ++L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHKPIMSAADVKNIPIPDPEMELGY- 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++ +RK L ++ LIGF G+PWT+A+YM+ GG K + + Y++ +
Sbjct: 124 ----VMDAVRAIRKALEGNVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L + ++ ++ + +II + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSVMIFDTWGGVLTKRDYLQFSLNYMHKIIDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEEM-AATGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVQNILSGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAV 345
>gi|84393079|ref|ZP_00991845.1| uroporphyrinogen decarboxylase [Vibrio splendidus 12B01]
gi|86147874|ref|ZP_01066179.1| uroporphyrinogen decarboxylase [Vibrio sp. MED222]
gi|84376331|gb|EAP93213.1| uroporphyrinogen decarboxylase [Vibrio splendidus 12B01]
gi|85834301|gb|EAQ52454.1| uroporphyrinogen decarboxylase [Vibrio sp. MED222]
Length = 355
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 190/349 (54%), Gaps = 16/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V IL+ G G +FNLGHGI V P+N V V
Sbjct: 299 AQPERIREEVGTILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVDAVH 347
>gi|51594649|ref|YP_068840.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
32953]
gi|153950025|ref|YP_001402800.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
31758]
gi|81691921|sp|Q66FP1|DCUP_YERPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012319|sp|A7FNH2|DCUP_YERP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|51587931|emb|CAH19534.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
32953]
gi|152961520|gb|ABS48981.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
31758]
Length = 355
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 186/351 (52%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P + V V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPAHAGAFVNAVHA 347
>gi|228473452|ref|ZP_04058205.1| uroporphyrinogen decarboxylase [Capnocytophaga gingivalis ATCC
33624]
gi|228275059|gb|EEK13862.1| uroporphyrinogen decarboxylase [Capnocytophaga gingivalis ATCC
33624]
Length = 342
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +LQG P +W+MRQAGRYLPE+R +R K+ +F C TPE E+T QP+
Sbjct: 8 LRILQGEKTERPAVWMMRQAGRYLPEFRALRTKY-DFFTRCRTPELVAEITTQPVDIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G ++ E GP + PI T+ +I + P + L Y++ +
Sbjct: 67 DAAILFSDILVVPQAMGIHIEMKEQVGPYLPHPIRTKADIERVQIPEVSEALGYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I + +++L + LIGF GAPWT+ Y + G K+ + FA+ L ++
Sbjct: 124 GIRLTKERLAGEVPLIGFAGAPWTIFCYAVEGKGSKNFDTAKSFAFSYPEWTAEFLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +Q+FD+ G L +++ Y+ +I+ A+ + P I F
Sbjct: 184 DTTIAYLREKVKAGVDALQLFDSWGGVLSAEDYQKYSWPYTRQIVEALSEEVP---VIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
AKG Y L+ + + + A+G+DW+ A +L V QGNLDP L+ + +
Sbjct: 241 AKGCWYALEEMSQ-SKAAALGVDWTCSPEMARKLTGGKKVLQGNLDPAWLLAPITQIKEK 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ G +I NLGHGI P+V ++ V+ V+S K
Sbjct: 300 TQQMIRAFGKEHYIANLGHGILPEVPVEHARAFVEAVKSFK 340
>gi|239813737|ref|YP_002942647.1| uroporphyrinogen decarboxylase [Variovorax paradoxus S110]
gi|259645160|sp|C5CLI6|DCUP_VARPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239800314|gb|ACS17381.1| uroporphyrinogen decarboxylase [Variovorax paradoxus S110]
Length = 370
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 179/345 (51%), Gaps = 24/345 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +F+ + +Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PVWLMRQAGRYLPEYVATRARAGSFMGLATNTDYATEVTLQPLERYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF-LNYLLPIFQSISILRKKLPNHI 138
DA+G + F EGPR P+ + D+ L Y +F +++ +RK L +
Sbjct: 84 PDAMGLGLSFEAGEGPRFARPVQGEAAVAALEVPDMAKLRY---VFDAVASIRKALDGRV 140
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A YM+ G D+ + Y + LL +D A YL AQI A
Sbjct: 141 PLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRLLAVNADSVAAYLNAQIDA 200
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLKN 255
G + +FD+ G L + F+ ++ R+++ ++R + + I F KG G L+
Sbjct: 201 GAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLQRNGADGQPVPRIVFTKGGGLWLEA 260
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG------PVQGNLDPMRLVVGNQVMIDGVNAIL 309
R L D +G+DW+V LS A L EG +QGN+DP L + V +L
Sbjct: 261 MREL-DCEVLGVDWTVNLSAARRLVGEGTDAKAKALQGNIDPNVLFAPPAQIEAEVAKVL 319
Query: 310 DVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G GP IFNLGHGI+ P +V LV+ V ++
Sbjct: 320 QAFGQPHADAAAKGPTHIFNLGHGISQFTPPDHVAALVQAVHAQS 364
>gi|237727867|ref|ZP_04558348.1| uroporphyrinogen decarboxylase [Citrobacter sp. 30_2]
gi|226910424|gb|EEH96342.1| uroporphyrinogen decarboxylase [Citrobacter sp. 30_2]
Length = 354
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT++ L P+ +
Sbjct: 61 LQPLRRYKLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITSKADVDKLPIPDPEDG 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPKV 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|15804588|ref|NP_290629.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 EDL933]
gi|12518926|gb|AAG59194.1|AE005631_9 uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EDL933]
Length = 354
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ A YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V V
Sbjct: 297 LYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVXAV 345
>gi|297582238|ref|ZP_06944154.1| uroporphyrinogen decarboxylase [Vibrio cholerae RC385]
gi|297533539|gb|EFH72384.1| uroporphyrinogen decarboxylase [Vibrio cholerae RC385]
Length = 359
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFVALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|73543024|ref|YP_297544.1| uroporphyrinogen decarboxylase [Ralstonia eutropha JMP134]
gi|123623792|sp|Q46VY4|DCUP_RALEJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72120437|gb|AAZ62700.1| uroporphyrinogen decarboxylase [Ralstonia eutropha JMP134]
Length = 363
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 186/337 (55%), Gaps = 23/337 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 22 PLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ T+ L P++ L Y +F +++ +R+ L
Sbjct: 82 PDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPDM-ASLQY---VFDAVAEIRRALVQD 137
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +LD + +EYL
Sbjct: 138 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILDINAQAVSEYLN 197
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGY 251
AQI AG + IFDT G L + ++ ++ + ++++ ++R++ + I F KG G
Sbjct: 198 AQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRKVLAGLKREHDGQQIPAIVFTKGGGL 257
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAI 308
L+ T ++AIGLDW+V L+ A ++ G +QGN+DP L + + V +
Sbjct: 258 WLEGLAD-TGADAIGLDWTVNLAQA--RRRTGGRVALQGNIDPTVLFAPEAAIREQVRGV 314
Query: 309 LDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
LD GS +FNLGHGI+ P++V LV V
Sbjct: 315 LDSYAAAGGSDGHVFNLGHGISQFTPPESVAVLVDEV 351
>gi|261344364|ref|ZP_05972008.1| uroporphyrinogen decarboxylase [Providencia rustigianii DSM 4541]
gi|282567635|gb|EFB73170.1| uroporphyrinogen decarboxylase [Providencia rustigianii DSM 4541]
Length = 354
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFIALCKNTELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RR+ DAAILFSDIL I DA+G + F EGPR + + N P+ ++ L Y
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFEKPIKNAADVKNIPIPDPEMELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ + L
Sbjct: 124 --VMDAVRAIRKALNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPTTLHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + IFDT G L + ++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIRAGAQSLMIFDTWGGVLTKRDYLQFSLHYMHKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEEM-AATGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 301 PARIEEEVQHILKGFGQGEGHVFNLGHGIHQDVQPEHAGTFVDAV 345
>gi|311281448|ref|YP_003943679.1| uroporphyrinogen decarboxylase [Enterobacter cloacae SCF1]
gi|308750643|gb|ADO50395.1| uroporphyrinogen decarboxylase [Enterobacter cloacae SCF1]
Length = 354
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRYKLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPIASKADVEKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V+ IL G G +FNLGHGI V P++ V V
Sbjct: 297 LYAPPARIEEEVSTILAGFGHGEGHVFNLGHGIHQDVLPEHAGAFVDAV 345
>gi|167855817|ref|ZP_02478569.1| uroporphyrinogen decarboxylase [Haemophilus parasuis 29755]
gi|167853030|gb|EDS24292.1| uroporphyrinogen decarboxylase [Haemophilus parasuis 29755]
Length = 354
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 187/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T+QP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP+ PI + +L P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIERKADVDHLPIPDPEQELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPALLHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKAGSQSVMVFDTWGGVLAHRDYNEFSLRYMHKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ + V AIL G G +FNLGHGI P PK +D V
Sbjct: 301 PERIEQEVKAILAGFGQGSGHVFNLGHGIHQDVPIESPKVFVDSV 345
>gi|262163607|ref|ZP_06031350.1| uroporphyrinogen III decarboxylase [Vibrio mimicus VM223]
gi|262027974|gb|EEY46636.1| uroporphyrinogen III decarboxylase [Vibrio mimicus VM223]
Length = 356
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 176 AVLHALLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKHGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 295 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 348
>gi|306812012|ref|ZP_07446220.1| uroporphyrinogen decarboxylase [Escherichia coli NC101]
gi|305854617|gb|EFM55053.1| uroporphyrinogen decarboxylase [Escherichia coli NC101]
Length = 354
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEEELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|293417499|ref|ZP_06660122.1| uroporphyrinogen decarboxylase [Escherichia coli B185]
gi|291430826|gb|EFF03823.1| uroporphyrinogen decarboxylase [Escherichia coli B185]
Length = 354
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVETILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|117928589|ref|YP_873140.1| uroporphyrinogen decarboxylase [Acidothermus cellulolyticus 11B]
gi|167012311|sp|A0LUP4|DCUP_ACIC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117649052|gb|ABK53154.1| uroporphyrinogen decarboxylase [Acidothermus cellulolyticus 11B]
Length = 368
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 187/344 (54%), Gaps = 21/344 (6%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L V +G P+W MRQAGR LPEYR R + L C + VELTLQP+RRY
Sbjct: 11 ALLRVCRGEPAPVTPVWFMRQAGRALPEYRAARGE-TPMLQACLDRDLIVELTLQPVRRY 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDI V G ++R GP D P+ ++ + P L + PI
Sbjct: 70 RVDAAILFSDITVPLALSGVSLRIEPGVGPVFDQPVRRAADVARIRP---LDRGSMTPIV 126
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +L +L I LIGF GAP+T+ASY++ GG +DH + Y + ++ LLD L
Sbjct: 127 EAVRLLVGELAG-IPLIGFAGAPFTLASYLVEGGPSRDHAVTKALMYSDPATWHALLDRL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+S E+L+AQI AGV V+Q+FD+ AG L ++ Y A G++++ + I
Sbjct: 186 ADISREFLLAQIDAGVSVVQVFDSWAGALHPDDYRRYVAPHSGKLLAGL-----PVPRIH 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
F G G +L +R + ++ +G+DW VPL A + + VQGNLDP + V+
Sbjct: 241 FGVGTGELLPQFRAVG-ADVVGVDWRVPLDVAARRIGADAVVQGNLDPAVVFAPWPVL-- 297
Query: 304 GVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A+ DVL G IFNLGHG+ P DP + +V V +
Sbjct: 298 -EAAVRDVLIRGRAARGHIFNLGHGVLPSTDPGVLAAIVDFVHA 340
>gi|183982051|ref|YP_001850342.1| uroporphyrinogen decarboxylase HemE [Mycobacterium marinum M]
gi|238056459|sp|B2HM23|DCUP_MYCMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|183175377|gb|ACC40487.1| uroporphyrinogen decarboxylase HemE [Mycobacterium marinum M]
Length = 353
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 188/334 (56%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R++ + L C+ PE E+T+QPIRRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRRQ-HSMLAACFEPEVACEVTMQPIRRYHVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + P+ T ++ + P ID + P+ ++ +L +L
Sbjct: 84 LRAAGVDLDIVADVGPVIAAPVRTVADVDAIKP-IDP--QSIAPVLDAVELLVAEL-GDT 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + + ++ L+ L+D++ E+L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRHHARTKAMMLAEPATWHALMTKLTDLTIEFLLGQIRA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYMLKNY 256
GVD IQ+FD+ AG L ++ YA R+ + + P F + A+ G M +
Sbjct: 200 GVDAIQVFDSWAGMLSLADYRQYALPHSARVFATLAEHGVPMTHFGVGTAELLGAMSEAV 259
Query: 257 RRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ T + +G+DW L+ A +Q +QGNLDP+ L+ G + A++D
Sbjct: 260 KPGT-AKVVGVDWRTALADAAARVQPGTALQGNLDPVVLLAGWPAVERAARAVVDDGRRA 318
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ ++FNLGHG+ PQ DP + DLV V S
Sbjct: 319 VDAGAAGYVFNLGHGVLPQTDPGVLTDLVSLVHS 352
>gi|188532331|ref|YP_001906128.1| uroporphyrinogen decarboxylase [Erwinia tasmaniensis Et1/99]
gi|238058036|sp|B2VG77|DCUP_ERWT9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|188027373|emb|CAO95220.1| Uroporphyrinogen decarboxylase [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ L+ A + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDLADARRRVGDRVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIEQEVAGILEGYGHGNGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|16767421|ref|NP_463036.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|18203230|sp|Q9L9I4|DCUP_SALTY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|6960341|gb|AAF33501.1| 97% identity over 353 amino acids with E. coli uroporphyrinogen
decarboxylase (heme) (SW:P29680); contains simlarity to
Pfam domain PF01208 (URO-D), Score=819, E=1.6e-242, N=1
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16422725|gb|AAL22995.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
Length = 354
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MR+AGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRRAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|86609317|ref|YP_478079.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123501882|sp|Q2JKH3|DCUP_SYNJB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86557859|gb|ABD02816.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 346
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 179/342 (52%), Gaps = 14/342 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G V++ PP+W+MRQAGRY+ YR+++ K+ F C PE VE++LQP R +
Sbjct: 4 RLLRAARGEVLDRPPVWMMRQAGRYMAAYRELQSKY-TFKQRCEIPELAVEISLQPFRAF 62
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDP-----ITTQEIYLLNPNIDLFLNYLL 121
D ILFSDIL + +G VE++GP +DP + I LL P L
Sbjct: 63 APDGVILFSDILTPLEGMGIPFELVEHQGPIIDPPIRSQAQIERIRLLEPEESL------ 116
Query: 122 PIFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P ++I S LR+++ TL+GF G+PWT+A Y + G KD+ + A+ + L
Sbjct: 117 PFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFAQPPLLHQL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D A Y+I QI G V+Q+FDT AG L ++E +A +I+ V+ +YP
Sbjct: 177 LSKLADSIARYVIYQIEGGAQVVQLFDTWAGQLSPVDYECWALPYQKQIVDQVKARYPQV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + LDW ++ A VQGNLDPM L+ +
Sbjct: 237 PLILYINGSAALLERVGK-AGIDVFSLDWMSDMAEARARLGSLAVQGNLDPMVLLGSPEF 295
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ GS I NLGHGI P NV +TVR
Sbjct: 296 IRQRTLEVIRKAGSRGHIMNLGHGIHPSTPEANVHYFFETVR 337
>gi|258624484|ref|ZP_05719430.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM603]
gi|258583233|gb|EEW08036.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM603]
Length = 356
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 176 AVLHALLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N ++ V
Sbjct: 295 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFIEAVHE 348
>gi|153216336|ref|ZP_01950414.1| uroporphyrinogen decarboxylase [Vibrio cholerae 1587]
gi|124114331|gb|EAY33151.1| uroporphyrinogen decarboxylase [Vibrio cholerae 1587]
Length = 359
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAVGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|326319144|ref|YP_004236816.1| uroporphyrinogen decarboxylase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375980|gb|ADX48249.1| uroporphyrinogen decarboxylase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 379
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 26/346 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 27 PLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPLERFPLDAAILFSDILTV 86
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR + E L P+++ L Y +F +++ +R+ L
Sbjct: 87 PDAMGLGLTFAEGEGPRFARVVRDEAAVAELAVPDMEK-LRY---VFDAVTSIRRALDGR 142
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 143 VPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAINADAVAAYLNAQID 202
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + I F KG L+
Sbjct: 203 AGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDVPRIVFTKGGALWLE 262
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + L D +GLDW+ L+ A L GP +QGN+DP L + + A+
Sbjct: 263 DMQGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVLFAPPEAIAAQARAV 321
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD G +GP IFNLGHGI+ P++V LV+ V
Sbjct: 322 LDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 367
>gi|295131993|ref|YP_003582669.1| uroporphyrinogen decarboxylase [Zunongwangia profunda SM-A87]
gi|294980008|gb|ADF50473.1| uroporphyrinogen decarboxylase [Zunongwangia profunda SM-A87]
Length = 342
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 188/343 (54%), Gaps = 16/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T PI +
Sbjct: 8 LRALKGETVERPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCRTPELAAEITTMPIEQVGT 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV+ A+ + GP + P+ +I + P++ L Y +
Sbjct: 67 DAAILFSDILVVPQAMNVEIEMKPGVGPFLPNPVRSPLDVNDIIV--PDVYEELGY---V 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ +I + +++L + + LIGF G+PWT+ Y++ G K+ + + F ++ A LL
Sbjct: 122 YDAIKLTKQRLNDEVPLIGFAGSPWTILCYLVQGQGSKNFDKAKEFCFKRPDAAQVLLQK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL ++ AGVD IQIFD+ G L +++ Y+ + + +II A++ + P I
Sbjct: 182 ITDTTISYLKGKVKAGVDAIQIFDSWGGLLSPTDYQTYSWKYIQQIIDALKDEIP---VI 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMI 302
++ KG + LK + + + A+G+DW+ A L + +QGN DP RL Q +
Sbjct: 239 AYGKGCWFALKEMSQ-SGAAALGVDWTCSAMNARYLSGGQITLQGNFDPSRLYSSPQEIK 297
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++D G +I NLGHGI P + +N V V+ K
Sbjct: 298 KMTTQMIDEFGKDRYIANLGHGILPDIPVRNAQAFVDAVKEYK 340
>gi|331649850|ref|ZP_08350928.1| uroporphyrinogen decarboxylase [Escherichia coli M605]
gi|330908312|gb|EGH36831.1| uroporphyrinogen 3 decarboxylase [Escherichia coli AA86]
gi|331041316|gb|EGI13468.1| uroporphyrinogen decarboxylase [Escherichia coli M605]
Length = 354
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 189/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHADVFVEAV 345
>gi|218702632|ref|YP_002410261.1| uroporphyrinogen decarboxylase [Escherichia coli IAI39]
gi|300938778|ref|ZP_07153491.1| uroporphyrinogen decarboxylase [Escherichia coli MS 21-1]
gi|331675483|ref|ZP_08376232.1| uroporphyrinogen decarboxylase [Escherichia coli TA280]
gi|226723870|sp|B7NRT0|DCUP_ECO7I RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218372618|emb|CAR20493.1| uroporphyrinogen decarboxylase [Escherichia coli IAI39]
gi|300456288|gb|EFK19781.1| uroporphyrinogen decarboxylase [Escherichia coli MS 21-1]
gi|331067361|gb|EGI38767.1| uroporphyrinogen decarboxylase [Escherichia coli TA280]
Length = 354
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 189/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|294788912|ref|ZP_06754152.1| uroporphyrinogen decarboxylase [Simonsiella muelleri ATCC 29453]
gi|294483014|gb|EFG30701.1| uroporphyrinogen decarboxylase [Simonsiella muelleri ATCC 29453]
Length = 353
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 181/332 (54%), Gaps = 16/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEYR R + F+D+C ++ E+T+QP+ R++ DAAILFSDIL +
Sbjct: 22 PIWMMRQAGRYLPEYRATRAQAGGFMDLCKNTDFATEVTIQPLERFDLDAAILFSDILTV 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGP+ P+ T+ L P++ L+Y +F ++S +RK L
Sbjct: 82 PDAMGLGLYFETGEGPKFTRPVQTEADVNALRVPDMSK-LHY---VFDAVSSIRKALNGR 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+P+T+A YM+ GG K+ + Y + +L + +YL QI
Sbjct: 138 VPLIGFSGSPFTLACYMVEGGGSKEFRLIKTMMYSRPDLLHKILSINAQAVTDYLNTQIQ 197
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
G +QIFDT G L F+ ++ R + +II+ + R+Y + I F KG G L+
Sbjct: 198 HGAQAVQIFDTWGGVLSHAAFQEFSLRYIQQIINGLTREYDGRRVPVIVFTKGGGQWLEQ 257
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
++A+GLDW+ S A Q+ G +QGN DP L + + IL
Sbjct: 258 MAE-CGADALGLDWTT--SIAQARQRVGDKVALQGNFDPFALFGTPERIRAEAAQILADY 314
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+G +FNLGHGI +P++ L+ TV
Sbjct: 315 GAGTGHVFNLGHGINQHANPEHAKILIDTVHE 346
>gi|218692278|ref|YP_002400490.1| uroporphyrinogen decarboxylase [Escherichia coli ED1a]
gi|254767695|sp|B7N2J9|DCUP_ECO81 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218429842|emb|CAR10668.1| uroporphyrinogen decarboxylase [Escherichia coli ED1a]
Length = 354
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 188/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVNGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|261188374|ref|XP_002620602.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis SLH14081]
gi|239593202|gb|EEQ75783.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis SLH14081]
gi|239609344|gb|EEQ86331.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis ER-3]
gi|327354445|gb|EGE83302.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis ATCC
18188]
Length = 365
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 195/350 (55%), Gaps = 34/350 (9%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G I PPIW+MRQAGRYLPEY Q++ K +F + C +PE LTLQPI RY+
Sbjct: 14 LLRAARGEKIERPPIWIMRQAGRYLPEYHQVKAK-NDFFECCRSPEIASTLTLQPIERYS 72
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P Q +L+ +D+ L+
Sbjct: 73 GLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPEPLKSPDDPQYRQVLDKKVDVAKELD 132
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 133 Y---VYKAITLTRHKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPEATK 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F ++ + I + + ++
Sbjct: 190 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPSSFAEFSLPYLRYISANLPKRLA 249
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L L DS N +GLDW + A+++ + +QGN D
Sbjct: 250 GMGQEVVPMTVFAKGAWYALDA---LCDSGYNVVGLDWLHDPAEAMKIARGRVTLQGNAD 306
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNV 334
P L G + + + AI++ + G +I NLGHGITP VDP+++
Sbjct: 307 PGCL-YGTR---ESITAIVENMVQGFWGEKRGWIANLGHGITPLVDPEDL 352
>gi|26250768|ref|NP_756808.1| uroporphyrinogen decarboxylase [Escherichia coli CFT073]
gi|91212796|ref|YP_542782.1| uroporphyrinogen decarboxylase [Escherichia coli UTI89]
gi|117626259|ref|YP_859582.1| uroporphyrinogen decarboxylase [Escherichia coli APEC O1]
gi|215489329|ref|YP_002331760.1| uroporphyrinogen decarboxylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218561063|ref|YP_002393976.1| uroporphyrinogen decarboxylase [Escherichia coli S88]
gi|227885473|ref|ZP_04003278.1| uroporphyrinogen decarboxylase [Escherichia coli 83972]
gi|237702764|ref|ZP_04533245.1| uroporphyrinogen decarboxylase [Escherichia sp. 3_2_53FAA]
gi|300979671|ref|ZP_07174643.1| uroporphyrinogen decarboxylase [Escherichia coli MS 45-1]
gi|301047731|ref|ZP_07194790.1| uroporphyrinogen decarboxylase [Escherichia coli MS 185-1]
gi|312965350|ref|ZP_07779583.1| uroporphyrinogen decarboxylase [Escherichia coli 2362-75]
gi|331660557|ref|ZP_08361490.1| uroporphyrinogen decarboxylase [Escherichia coli TA206]
gi|29611768|sp|Q8FB74|DCUP_ECOL6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122422155|sp|Q1R5W3|DCUP_ECOUT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234247|sp|A1AIG8|DCUP_ECOK1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723869|sp|B7MIY3|DCUP_ECO45 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767693|sp|B7UPF2|DCUP_ECO27 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|26111199|gb|AAN83382.1|AE016770_182 Uroporphyrinogen decarboxylase [Escherichia coli CFT073]
gi|91074370|gb|ABE09251.1| uroporphyrinogen decarboxylase [Escherichia coli UTI89]
gi|115515383|gb|ABJ03458.1| uroporphyrinogen decarboxylase [Escherichia coli APEC O1]
gi|215267401|emb|CAS11852.1| uroporphyrinogen decarboxylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218367832|emb|CAR05627.1| uroporphyrinogen decarboxylase [Escherichia coli S88]
gi|222035708|emb|CAP78453.1| Uroporphyrinogen decarboxylase [Escherichia coli LF82]
gi|226903077|gb|EEH89336.1| uroporphyrinogen decarboxylase [Escherichia sp. 3_2_53FAA]
gi|227837547|gb|EEJ48013.1| uroporphyrinogen decarboxylase [Escherichia coli 83972]
gi|281181061|dbj|BAI57391.1| uroporphyrinogen decarboxylase [Escherichia coli SE15]
gi|294493449|gb|ADE92205.1| uroporphyrinogen decarboxylase [Escherichia coli IHE3034]
gi|300300396|gb|EFJ56781.1| uroporphyrinogen decarboxylase [Escherichia coli MS 185-1]
gi|300409455|gb|EFJ92993.1| uroporphyrinogen decarboxylase [Escherichia coli MS 45-1]
gi|307556140|gb|ADN48915.1| uroporphyrinogen decarboxylase [Escherichia coli ABU 83972]
gi|307628386|gb|ADN72690.1| uroporphyrinogen decarboxylase [Escherichia coli UM146]
gi|312290024|gb|EFR17911.1| uroporphyrinogen decarboxylase [Escherichia coli 2362-75]
gi|312948571|gb|ADR29398.1| uroporphyrinogen decarboxylase [Escherichia coli O83:H1 str. NRG
857C]
gi|315288342|gb|EFU47741.1| uroporphyrinogen decarboxylase [Escherichia coli MS 110-3]
gi|315294346|gb|EFU53697.1| uroporphyrinogen decarboxylase [Escherichia coli MS 153-1]
gi|315300740|gb|EFU59965.1| uroporphyrinogen decarboxylase [Escherichia coli MS 16-3]
gi|320197108|gb|EFW71726.1| Uroporphyrinogen III decarboxylase [Escherichia coli WV_060327]
gi|323190146|gb|EFZ75424.1| uroporphyrinogen decarboxylase [Escherichia coli RN587/1]
gi|323948832|gb|EGB44729.1| uroporphyrinogen decarboxylase [Escherichia coli H252]
gi|323953791|gb|EGB49598.1| uroporphyrinogen decarboxylase [Escherichia coli H263]
gi|324009483|gb|EGB78702.1| uroporphyrinogen decarboxylase [Escherichia coli MS 57-2]
gi|331052340|gb|EGI24378.1| uroporphyrinogen decarboxylase [Escherichia coli TA206]
Length = 354
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 187/345 (54%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|311029477|ref|ZP_07707567.1| uroporphyrinogen decarboxylase [Bacillus sp. m3-13]
Length = 346
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 194/340 (57%), Gaps = 16/340 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G P+W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN
Sbjct: 11 LRACRGEKTEHVPLWYMRQAGRSQPEYRKIKEKYSLF-EITHQPELCAYVTKLPVDQYNV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP +D PI + +++ ++P D+ Y+L
Sbjct: 70 DAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSMQDVEKLGEIHPEQDV--PYVL-- 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L K+ N + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 126 -DTIKLLTKEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWFALMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ +QIHAG IQIFD+ G L ++ + + RI S+++ + N I
Sbjct: 184 LADMTITYVRSQIHAGAKAIQIFDSWVGALNVEDYRYFIKPVMTRIFSSLKEE--NVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L + +GLDW +P+S A E PVQGNLDP L+ +V+ +
Sbjct: 242 MFGVGASHLANEWHDLP-LDVVGLDWRLPISEARERGITKPVQGNLDPAILLAPWEVIEE 300
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
AILD P +IFNLGHG+ PQV+P + L V
Sbjct: 301 KAKAILDQGMQQPGYIFNLGHGVFPQVNPDTLKRLATFVH 340
>gi|409791|gb|AAC43095.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
Length = 354
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLXQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|229526894|ref|ZP_04416297.1| uroporphyrinogen III decarboxylase [Vibrio cholerae bv. albensis
VL426]
gi|229336063|gb|EEO01082.1| uroporphyrinogen III decarboxylase [Vibrio cholerae bv. albensis
VL426]
Length = 360
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 9 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP + PIT + +I + +P + L
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE--LQ 126
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y++ + IS K L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 127 YVMNAVRQIS---KDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 184 ALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENE 243
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 244 GRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILY 302
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 303 APAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|22124411|ref|NP_667834.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM 10]
gi|45442851|ref|NP_994390.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Microtus
str. 91001]
gi|108809598|ref|YP_653514.1| uroporphyrinogen decarboxylase [Yersinia pestis Antiqua]
gi|108810397|ref|YP_646164.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|145600979|ref|YP_001165055.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides F]
gi|153997232|ref|ZP_02022339.1| uroporphyrinogen decarboxylase [Yersinia pestis CA88-4125]
gi|162421492|ref|YP_001605064.1| uroporphyrinogen decarboxylase [Yersinia pestis Angola]
gi|165928321|ref|ZP_02224153.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938227|ref|ZP_02226786.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166012062|ref|ZP_02232960.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214417|ref|ZP_02240452.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402412|ref|ZP_02307872.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422930|ref|ZP_02314683.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426822|ref|ZP_02318575.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470604|ref|ZP_02335308.1| uroporphyrinogen decarboxylase [Yersinia pestis FV-1]
gi|170022609|ref|YP_001719114.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis YPIII]
gi|186893651|ref|YP_001870763.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis PB1/+]
gi|218930739|ref|YP_002348614.1| uroporphyrinogen decarboxylase [Yersinia pestis CO92]
gi|229837482|ref|ZP_04457644.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides A]
gi|229839417|ref|ZP_04459576.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899979|ref|ZP_04515119.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900572|ref|ZP_04515698.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|294505404|ref|YP_003569466.1| uroporphyrinogen decarboxylase [Yersinia pestis Z176003]
gi|23813999|sp|Q8ZAQ7|DCUP_YERPE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123372029|sp|Q1C1V3|DCUP_YERPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123373533|sp|Q1CN66|DCUP_YERPN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166198369|sp|A4TS20|DCUP_YERPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058174|sp|B2K124|DCUP_YERPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058175|sp|A9R8D5|DCUP_YERPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058179|sp|B1JJL0|DCUP_YERPY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21957194|gb|AAM84085.1|AE013650_10 uroporphyrinogen decarboxylase [Yersinia pestis KIM 10]
gi|45437717|gb|AAS63267.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Microtus
str. 91001]
gi|108774045|gb|ABG16564.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|108781511|gb|ABG15569.1| uroporphyrinogen decarboxylase [Yersinia pestis Antiqua]
gi|115349350|emb|CAL22321.1| uroporphyrinogen decarboxylase [Yersinia pestis CO92]
gi|145212675|gb|ABP42082.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides F]
gi|149289340|gb|EDM39419.1| uroporphyrinogen decarboxylase [Yersinia pestis CA88-4125]
gi|162354307|gb|ABX88255.1| uroporphyrinogen decarboxylase [Yersinia pestis Angola]
gi|165913888|gb|EDR32506.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919660|gb|EDR36993.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989057|gb|EDR41358.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204421|gb|EDR48901.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166957141|gb|EDR55162.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048192|gb|EDR59600.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054204|gb|EDR64029.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749143|gb|ACA66661.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis YPIII]
gi|186696677|gb|ACC87306.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis PB1/+]
gi|229682392|gb|EEO78482.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|229686964|gb|EEO79040.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695783|gb|EEO85830.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704170|gb|EEO91181.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides A]
gi|262363470|gb|ACY60191.1| uroporphyrinogen decarboxylase [Yersinia pestis D106004]
gi|294355863|gb|ADE66204.1| uroporphyrinogen decarboxylase [Yersinia pestis Z176003]
gi|320013665|gb|ADV97236.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 355
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 186/351 (52%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGPWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P + V V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPAHAGAFVNAVHA 347
>gi|172046133|sp|Q6LLW6|DCUP_PHOPR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 189/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 176 ATLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +AIGLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENDGHRVPVTLFTKNGGMWLEQI-AATGCDAIGLDWTINIADANRRVGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 295 SILYAQPERIRQEVATILEGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|311745788|ref|ZP_07719573.1| uroporphyrinogen decarboxylase [Algoriphagus sp. PR1]
gi|126575988|gb|EAZ80266.1| uroporphyrinogen decarboxylase [Algoriphagus sp. PR1]
Length = 340
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 6/336 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+WLMRQAGR LPEYR +R+ F+++ TPE E+T+QP+
Sbjct: 8 LLRAAKGEKTERTPVWLMRQAGRILPEYRAVRESVSGFIELAQTPELAAEVTIQPVDLLG 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILVI +A+G +E +GP E L + N L + ++I
Sbjct: 68 VDAAIIFSDILVIPEAMGLPYEMIEKKGPWFPETVRTEADLKKLRVADGANDLSYVIKAI 127
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
I +K L + LIGF GAPWT+ +YM+ G K + R Y + L+ ++D
Sbjct: 128 EITKKNLNGRVPLIGFAGAPWTIFAYMVEGSGSKTFSRAREILYTQPAFAHQLMQMITDS 187
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ YL AQI AG D++Q+FD+ AG LG ++ ++ R + +I A+ FAK
Sbjct: 188 TINYLKAQIKAGADLVQVFDSWAGILGPKQYLEFSHRYISQICDAIN----EVPVTVFAK 243
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GA + + +L + IGLDW++ + + +L +QGNLDP L + +
Sbjct: 244 GAFFAREEMGKL-NCETIGLDWNMGIEESYKLIGANKTLQGNLDPAALYGNPEEVRSATL 302
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+++ I NLGHG+ P + P+ V ++TV+
Sbjct: 303 EMMEQFKGKRHIANLGHGVYPDIKPEKVKVFIETVK 338
>gi|170770128|ref|ZP_02904581.1| uroporphyrinogen decarboxylase [Escherichia albertii TW07627]
gi|170121010|gb|EDS89941.1| uroporphyrinogen decarboxylase [Escherichia albertii TW07627]
Length = 354
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|54310494|ref|YP_131514.1| uroporphyrinogen decarboxylase [Photobacterium profundum SS9]
gi|46914937|emb|CAG21712.1| putative uroporphyrinogen decarboxylase [Photobacterium profundum
SS9]
Length = 359
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 189/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 5 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 180 ATLHLLLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +AIGLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENDGHRVPVTLFTKNGGMWLEQI-AATGCDAIGLDWTINIADANRRVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 299 SILYAQPERIRQEVATILEGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 352
>gi|33594189|ref|NP_881833.1| uroporphyrinogen decarboxylase [Bordetella pertussis Tohama I]
gi|45476873|sp|Q7VU41|DCUP_BORPE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33564264|emb|CAE43556.1| uroporphyrinogen decarboxylase [Bordetella pertussis Tohama I]
gi|332383603|gb|AEE68450.1| uroporphyrinogen decarboxylase [Bordetella pertussis CS]
Length = 358
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 177/332 (53%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPLARYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F EGPR P+ + L P++D L Y +F ++ +R++L
Sbjct: 84 PHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPDMD-SLRY---VFDAVRTIRRELDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM G D+ + Y + +L+ ++ + YL AQI
Sbjct: 140 VPLIGFAGSPWTIACYMAEGRGSDDYRLIKSMLYGRPDLLHRILEINAEATRHYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKN 255
AG + +FD+ G L + F+ ++ R++ + R+ + I F KG G L+
Sbjct: 200 AGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRVPVIVFTKGGGQWLEE 259
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV--- 311
+A+GLDW+V L A + +QGNLDPM L G Q + LD
Sbjct: 260 I-AACGCDAVGLDWTVNLGAARRRVTDAVALQGNLDPMTLFGGAQAVRAEARRTLDAFGP 318
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G G +FNLGHGI+ P+ V +LV V +
Sbjct: 319 VGKGGHVFNLGHGISQYSPPEVVSELVDEVHT 350
>gi|258565903|ref|XP_002583696.1| uroporphyrinogen decarboxylase [Uncinocarpus reesii 1704]
gi|237907397|gb|EEP81798.1| uroporphyrinogen decarboxylase [Uncinocarpus reesii 1704]
Length = 365
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 187/344 (54%), Gaps = 22/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C PE LTLQPI RY
Sbjct: 13 LLRAAKGERVERPPIWIMRQAGRYLPEYHEA-KGSRDFFECCRDPEVASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V ++ +GP +P+ + +++ ++ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPEPLQSPDDGQYEKVMAKEVDVKAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWLYKYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + I + + ++
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIATNLPKRTS 248
Query: 237 ---YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPVQGNLDPM 292
Y A FAKGA Y L + + + N +GLDW P A +QGN DP
Sbjct: 249 ELGYEPAPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQAARIANGRVTLQGNADPG 307
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G +I NLGHG+TP VDP+ +
Sbjct: 308 CLYGSKEAITAVVENMVAGFWGGKQRWIVNLGHGVTPFVDPEKL 351
>gi|229541442|ref|ZP_04430502.1| uroporphyrinogen decarboxylase [Bacillus coagulans 36D1]
gi|229325862|gb|EEN91537.1| uroporphyrinogen decarboxylase [Bacillus coagulans 36D1]
Length = 351
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 194/337 (57%), Gaps = 16/337 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ +G P+W MRQAGR PEYR++++K+ F D+ + PE +T P+ Y+
Sbjct: 10 LLKAARGEQTGRVPVWYMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTRLPVEHYD 68
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
DAAIL+ DI+ ALG V ++ GP + +P+++ +++ L+P D+ Y+L
Sbjct: 69 VDAAILYKDIMTPLPALGVEVEILKGAGPVIHNPVSSLKDVEKLGELHPEEDV--PYVLE 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ + +P LIGF GAP+T+ASYMI GG KD+ + + F Y +A+ L++
Sbjct: 127 TIRLLTEEQLAVP----LIGFSGAPFTLASYMIEGGPSKDYRKTKAFMYTEPKAWFALME 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D+ Y+ AQI AG IQIFD+ G L ++ Y + RI +A+R + NA F
Sbjct: 183 KLADMIIVYVKAQIKAGASAIQIFDSWVGALNAADYRYYMKPVMERIFTALRTE--NAPF 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F GAG++ + L + +GLDW +P+ A L +QGNLDP L+ +V+
Sbjct: 241 ILFGVGAGHLALEWNSLP-IDVVGLDWRLPIQKARALGVTKAIQGNLDPAVLLSPWEVIQ 299
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ AILD + P +IFNLGHG+TP V P+ + L
Sbjct: 300 EKAAAILDEGMAQPGYIFNLGHGVTPDVRPETLKRLT 336
>gi|38233021|ref|NP_938788.1| uroporphyrinogen decarboxylase [Corynebacterium diphtheriae NCTC
13129]
gi|81698612|sp|Q6NJJ4|DCUP_CORDI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|38199280|emb|CAE48911.1| uroporphyrinogen decarboxylase [Corynebacterium diphtheriae]
Length = 344
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 187/347 (53%), Gaps = 22/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ G + P+W MRQAGR LPEYR+IR+ + LD C+ P+ E+TLQP+RR++
Sbjct: 8 ILDAAAGVTPHRRPVWFMRQAGRSLPEYREIREGV-SMLDSCFRPDMLAEITLQPVRRHD 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDI+V A G V V GP MD +T Q+I N+ + + + + +
Sbjct: 67 VDAAILFSDIVVPLKAAGVRVEIVPGRGPVMDHPLLTRQDIE----NLPILDHDVHEVAE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I I+R++L + TLIGF GAP+T+ASY++ GG K+H + + +Q+ +++ L+ L
Sbjct: 123 GIGIIREELNDAQTLIGFAGAPFTLASYLVEGGPSKNHEKTKSLMHQDPESWHLLMRRLV 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++L QI AGV +Q+FD+ AG L E ++ + I++ V + I F
Sbjct: 183 PTIVQFLRTQIDAGVQAMQLFDSWAGFLSERDYREFVLPYSMEILAQVG----DVPRIHF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVM--- 301
G G +L S +G+DW VPL A + V QGNLDP L G VM
Sbjct: 239 GVGTGELLTAMSE-AGSEVVGVDWRVPLDVAAQRMVSPKVLQGNLDPAILFAGEDVMRRE 297
Query: 302 -----IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ AI +G IFNLGHG+ P DP + V+ + +
Sbjct: 298 IARICAEADRAIAAGHATG-HIFNLGHGVLPNTDPDAITRAVEIIHT 343
>gi|16131827|ref|NP_418425.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
gi|74314491|ref|YP_312910.1| uroporphyrinogen decarboxylase [Shigella sonnei Ss046]
gi|89110041|ref|AP_003821.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
W3110]
gi|157158608|ref|YP_001465492.1| uroporphyrinogen decarboxylase [Escherichia coli E24377A]
gi|157163466|ref|YP_001460784.1| uroporphyrinogen decarboxylase [Escherichia coli HS]
gi|170022000|ref|YP_001726954.1| uroporphyrinogen decarboxylase [Escherichia coli ATCC 8739]
gi|170083458|ref|YP_001732778.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
DH10B]
gi|170683454|ref|YP_001746381.1| uroporphyrinogen decarboxylase [Escherichia coli SMS-3-5]
gi|187733317|ref|YP_001882683.1| uroporphyrinogen decarboxylase [Shigella boydii CDC 3083-94]
gi|188491734|ref|ZP_02999004.1| uroporphyrinogen decarboxylase [Escherichia coli 53638]
gi|191168667|ref|ZP_03030448.1| uroporphyrinogen decarboxylase [Escherichia coli B7A]
gi|193066418|ref|ZP_03047465.1| uroporphyrinogen decarboxylase [Escherichia coli E22]
gi|193067936|ref|ZP_03048902.1| uroporphyrinogen decarboxylase [Escherichia coli E110019]
gi|194429956|ref|ZP_03062465.1| uroporphyrinogen decarboxylase [Escherichia coli B171]
gi|194439790|ref|ZP_03071857.1| uroporphyrinogen decarboxylase [Escherichia coli 101-1]
gi|209921476|ref|YP_002295560.1| uroporphyrinogen decarboxylase [Escherichia coli SE11]
gi|218556552|ref|YP_002389466.1| uroporphyrinogen decarboxylase [Escherichia coli IAI1]
gi|218707616|ref|YP_002415135.1| uroporphyrinogen decarboxylase [Escherichia coli UMN026]
gi|238903054|ref|YP_002928850.1| uroporphyrinogen decarboxylase [Escherichia coli BW2952]
gi|253775373|ref|YP_003038204.1| uroporphyrinogen decarboxylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254039254|ref|ZP_04873303.1| uroporphyrinogen decarboxylase [Escherichia sp. 1_1_43]
gi|254163939|ref|YP_003047047.1| uroporphyrinogen decarboxylase [Escherichia coli B str. REL606]
gi|256026313|ref|ZP_05440178.1| uroporphyrinogen decarboxylase [Escherichia sp. 4_1_40B]
gi|260846797|ref|YP_003224575.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O103:H2 str.
12009]
gi|260858107|ref|YP_003231998.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O26:H11 str.
11368]
gi|291285412|ref|YP_003502230.1| Uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
CB9615]
gi|293407614|ref|ZP_06651532.1| hemE [Escherichia coli FVEC1412]
gi|298383362|ref|ZP_06992954.1| uroporphyrinogen decarboxylase [Escherichia coli FVEC1302]
gi|300819809|ref|ZP_07099996.1| uroporphyrinogen decarboxylase [Escherichia coli MS 107-1]
gi|300824622|ref|ZP_07104730.1| uroporphyrinogen decarboxylase [Escherichia coli MS 119-7]
gi|300897588|ref|ZP_07115997.1| uroporphyrinogen decarboxylase [Escherichia coli MS 198-1]
gi|300919415|ref|ZP_07135919.1| uroporphyrinogen decarboxylase [Escherichia coli MS 115-1]
gi|300925866|ref|ZP_07141709.1| uroporphyrinogen decarboxylase [Escherichia coli MS 182-1]
gi|300928816|ref|ZP_07144324.1| uroporphyrinogen decarboxylase [Escherichia coli MS 187-1]
gi|300947396|ref|ZP_07161589.1| uroporphyrinogen decarboxylase [Escherichia coli MS 116-1]
gi|300954772|ref|ZP_07167202.1| uroporphyrinogen decarboxylase [Escherichia coli MS 175-1]
gi|301019420|ref|ZP_07183595.1| uroporphyrinogen decarboxylase [Escherichia coli MS 69-1]
gi|301023367|ref|ZP_07187157.1| uroporphyrinogen decarboxylase [Escherichia coli MS 196-1]
gi|301325705|ref|ZP_07219164.1| uroporphyrinogen decarboxylase [Escherichia coli MS 78-1]
gi|301645747|ref|ZP_07245668.1| uroporphyrinogen decarboxylase [Escherichia coli MS 146-1]
gi|307140689|ref|ZP_07500045.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|307315030|ref|ZP_07594616.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|309797701|ref|ZP_07692087.1| uroporphyrinogen decarboxylase [Escherichia coli MS 145-7]
gi|312974217|ref|ZP_07788387.1| uroporphyrinogen decarboxylase [Escherichia coli 1827-70]
gi|331644733|ref|ZP_08345851.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|331655697|ref|ZP_08356687.1| uroporphyrinogen decarboxylase [Escherichia coli M718]
gi|331670851|ref|ZP_08371686.1| uroporphyrinogen decarboxylase [Escherichia coli TA271]
gi|331680120|ref|ZP_08380781.1| uroporphyrinogen decarboxylase [Escherichia coli H591]
gi|331685739|ref|ZP_08386321.1| uroporphyrinogen decarboxylase [Escherichia coli H299]
gi|1352226|sp|P29680|DCUP_ECOLI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123615610|sp|Q3YUY7|DCUP_SHISS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012312|sp|A7ZUL3|DCUP_ECO24 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012313|sp|A8A797|DCUP_ECOHS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083005|sp|B1IUQ0|DCUP_ECOLC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696375|sp|B6I5K8|DCUP_ECOSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723871|sp|B7M7Q6|DCUP_ECO8A RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723872|sp|B7NFT8|DCUP_ECOLU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723873|sp|B1LNU9|DCUP_ECOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229889831|sp|B1XC00|DCUP_ECODH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058112|sp|B2TWI4|DCUP_SHIB3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|259645147|sp|C5A0T8|DCUP_ECOBW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2367337|gb|AAC76971.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
gi|73857968|gb|AAZ90675.1| uroporphyrinogen decarboxylase [Shigella sonnei Ss046]
gi|85676072|dbj|BAE77322.1| uroporphyrinogen decarboxylase [Escherichia coli str. K12 substr.
W3110]
gi|157069146|gb|ABV08401.1| uroporphyrinogen decarboxylase [Escherichia coli HS]
gi|157080638|gb|ABV20346.1| uroporphyrinogen decarboxylase [Escherichia coli E24377A]
gi|169756928|gb|ACA79627.1| uroporphyrinogen decarboxylase [Escherichia coli ATCC 8739]
gi|169891293|gb|ACB05000.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
DH10B]
gi|170521172|gb|ACB19350.1| uroporphyrinogen decarboxylase [Escherichia coli SMS-3-5]
gi|187430309|gb|ACD09583.1| uroporphyrinogen decarboxylase [Shigella boydii CDC 3083-94]
gi|188486933|gb|EDU62036.1| uroporphyrinogen decarboxylase [Escherichia coli 53638]
gi|190901307|gb|EDV61075.1| uroporphyrinogen decarboxylase [Escherichia coli B7A]
gi|192925942|gb|EDV80589.1| uroporphyrinogen decarboxylase [Escherichia coli E22]
gi|192958911|gb|EDV89348.1| uroporphyrinogen decarboxylase [Escherichia coli E110019]
gi|194411985|gb|EDX28298.1| uroporphyrinogen decarboxylase [Escherichia coli B171]
gi|194421287|gb|EDX37307.1| uroporphyrinogen decarboxylase [Escherichia coli 101-1]
gi|209751714|gb|ACI74164.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209914735|dbj|BAG79809.1| uroporphyrinogen decarboxylase [Escherichia coli SE11]
gi|218363321|emb|CAR00971.1| uroporphyrinogen decarboxylase [Escherichia coli IAI1]
gi|218434713|emb|CAR15645.1| uroporphyrinogen decarboxylase [Escherichia coli UMN026]
gi|226838489|gb|EEH70519.1| uroporphyrinogen decarboxylase [Escherichia sp. 1_1_43]
gi|238863776|gb|ACR65774.1| uroporphyrinogen decarboxylase [Escherichia coli BW2952]
gi|242379528|emb|CAQ34344.1| uroporphyrinogen decarboxylase [Escherichia coli BL21(DE3)]
gi|253326417|gb|ACT31019.1| uroporphyrinogen decarboxylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975840|gb|ACT41511.1| uroporphyrinogen decarboxylase [Escherichia coli B str. REL606]
gi|253979996|gb|ACT45666.1| uroporphyrinogen decarboxylase [Escherichia coli BL21(DE3)]
gi|257756756|dbj|BAI28258.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O26:H11 str.
11368]
gi|257761944|dbj|BAI33441.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O103:H2 str.
12009]
gi|260451175|gb|ACX41597.1| uroporphyrinogen decarboxylase [Escherichia coli DH1]
gi|290765285|gb|ADD59246.1| Uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
CB9615]
gi|291425382|gb|EFE98422.1| hemE [Escherichia coli FVEC1412]
gi|298276241|gb|EFI17762.1| uroporphyrinogen decarboxylase [Escherichia coli FVEC1302]
gi|299880887|gb|EFI89098.1| uroporphyrinogen decarboxylase [Escherichia coli MS 196-1]
gi|300318271|gb|EFJ68055.1| uroporphyrinogen decarboxylase [Escherichia coli MS 175-1]
gi|300358664|gb|EFJ74534.1| uroporphyrinogen decarboxylase [Escherichia coli MS 198-1]
gi|300399274|gb|EFJ82812.1| uroporphyrinogen decarboxylase [Escherichia coli MS 69-1]
gi|300413508|gb|EFJ96818.1| uroporphyrinogen decarboxylase [Escherichia coli MS 115-1]
gi|300418056|gb|EFK01367.1| uroporphyrinogen decarboxylase [Escherichia coli MS 182-1]
gi|300453000|gb|EFK16620.1| uroporphyrinogen decarboxylase [Escherichia coli MS 116-1]
gi|300463197|gb|EFK26690.1| uroporphyrinogen decarboxylase [Escherichia coli MS 187-1]
gi|300522871|gb|EFK43940.1| uroporphyrinogen decarboxylase [Escherichia coli MS 119-7]
gi|300527630|gb|EFK48692.1| uroporphyrinogen decarboxylase [Escherichia coli MS 107-1]
gi|300847494|gb|EFK75254.1| uroporphyrinogen decarboxylase [Escherichia coli MS 78-1]
gi|301075996|gb|EFK90802.1| uroporphyrinogen decarboxylase [Escherichia coli MS 146-1]
gi|306905535|gb|EFN36068.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|308118713|gb|EFO55975.1| uroporphyrinogen decarboxylase [Escherichia coli MS 145-7]
gi|309704413|emb|CBJ03762.1| uroporphyrinogen decarboxylase [Escherichia coli ETEC H10407]
gi|310331384|gb|EFP98649.1| uroporphyrinogen decarboxylase [Escherichia coli 1827-70]
gi|315063322|gb|ADT77649.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|315138554|dbj|BAJ45713.1| uroporphyrinogen decarboxylase [Escherichia coli DH1]
gi|315617361|gb|EFU97967.1| uroporphyrinogen decarboxylase [Escherichia coli 3431]
gi|320172741|gb|EFW47975.1| Uroporphyrinogen III decarboxylase [Shigella dysenteriae CDC
74-1112]
gi|320200163|gb|EFW74752.1| Uroporphyrinogen III decarboxylase [Escherichia coli EC4100B]
gi|320655134|gb|EFX23090.1| uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660778|gb|EFX28232.1| uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str. USDA
5905]
gi|323155555|gb|EFZ41732.1| uroporphyrinogen decarboxylase [Escherichia coli EPECa14]
gi|323161281|gb|EFZ47191.1| uroporphyrinogen decarboxylase [Escherichia coli E128010]
gi|323167467|gb|EFZ53175.1| uroporphyrinogen decarboxylase [Shigella sonnei 53G]
gi|323174491|gb|EFZ60116.1| uroporphyrinogen decarboxylase [Escherichia coli LT-68]
gi|323380614|gb|ADX52882.1| uroporphyrinogen decarboxylase [Escherichia coli KO11]
gi|323933961|gb|EGB30435.1| uroporphyrinogen decarboxylase [Escherichia coli E1520]
gi|323938886|gb|EGB35106.1| uroporphyrinogen decarboxylase [Escherichia coli E482]
gi|323958924|gb|EGB54599.1| uroporphyrinogen decarboxylase [Escherichia coli H489]
gi|323963784|gb|EGB59283.1| uroporphyrinogen decarboxylase [Escherichia coli M863]
gi|323969071|gb|EGB64379.1| uroporphyrinogen decarboxylase [Escherichia coli TA007]
gi|324017350|gb|EGB86569.1| uroporphyrinogen decarboxylase [Escherichia coli MS 117-3]
gi|324110909|gb|EGC04901.1| uroporphyrinogen decarboxylase [Escherichia fergusonii B253]
gi|327250468|gb|EGE62178.1| uroporphyrinogen decarboxylase [Escherichia coli STEC_7v]
gi|331036033|gb|EGI08270.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|331046622|gb|EGI18709.1| uroporphyrinogen decarboxylase [Escherichia coli M718]
gi|331061939|gb|EGI33863.1| uroporphyrinogen decarboxylase [Escherichia coli TA271]
gi|331072275|gb|EGI43609.1| uroporphyrinogen decarboxylase [Escherichia coli H591]
gi|331077049|gb|EGI48265.1| uroporphyrinogen decarboxylase [Escherichia coli H299]
Length = 354
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|293413433|ref|ZP_06656093.1| uroporphyrinogen decarboxylase [Escherichia coli B354]
gi|291468028|gb|EFF10527.1| uroporphyrinogen decarboxylase [Escherichia coli B354]
Length = 354
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADIDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|256375688|ref|YP_003099348.1| uroporphyrinogen decarboxylase [Actinosynnema mirum DSM 43827]
gi|255919991|gb|ACU35502.1| uroporphyrinogen decarboxylase [Actinosynnema mirum DSM 43827]
Length = 350
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 21/356 (5%)
Query: 1 MNERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + +L +G + P+W MRQAGR LPEYR +R LD C+ PE E+T
Sbjct: 5 MTEMTEPPLLVAARGGTPSRTPVWFMRQAGRSLPEYRALRAG-TAMLDACFDPEMVCEIT 63
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RR++ D AILFSDI+V A G ++ V GP + P+ T++ P ++
Sbjct: 64 MQPVRRHDVDGAILFSDIVVPLKAAGVDLDIVAGTGPVVASPVRTRDDVAALPELEA--A 121
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ P+ +I +L K+L N + LIGF GAP+T+ASY++ GG ++H + + + + ++
Sbjct: 122 HVRPVADAIGLLLKELGN-VPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPDLWH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++D++AE+L Q+ AGV +Q+FD+ AG L E ++ + R++ ++
Sbjct: 181 ALLAKIADITAEFLRVQVEAGVKAVQLFDSWAGALSERDYRTFVLPHSTRVLESIT---- 236
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGP------VQGNLDP 291
I F G +L R ++ +G+DW PL A+ + + P VQGNLDP
Sbjct: 237 GVPRIHFGVGTTELLPAMRE-AGADVVGVDWRTPLDVAVRRMVQAAPDLPPPVVQGNLDP 295
Query: 292 MRLVVGNQVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L G + V+ I++ + SG IFNLGHG+ P DP + V+ V +
Sbjct: 296 ALLFAGIPALEREVDRIVEEGKVASG-HIFNLGHGVLPDTDPDVITKAVELVHRSR 350
>gi|148981199|ref|ZP_01816325.1| uroporphyrinogen decarboxylase [Vibrionales bacterium SWAT-3]
gi|145960955|gb|EDK26281.1| uroporphyrinogen decarboxylase [Vibrionales bacterium SWAT-3]
Length = 355
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLQQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PI ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPIACKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ + A++ + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V+ IL+ G +FNLGHGI V P+N V V
Sbjct: 299 ASPERIREEVSTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|71024153|ref|XP_762306.1| hypothetical protein UM06159.1 [Ustilago maydis 521]
gi|46101811|gb|EAK87044.1| hypothetical protein UM06159.1 [Ustilago maydis 521]
Length = 414
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 195/369 (52%), Gaps = 37/369 (10%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I+ +G P W+MRQAGRYLPE+R+IR+ +F + C PE E+T+QPIRRY+
Sbjct: 34 IIRAARGYQTERAPCWIMRQAGRYLPEFRKIREDH-DFFECCRNPELASEITVQPIRRYS 92
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ A+G V + +GP DP +T +++ L +
Sbjct: 93 GLLDAAIIFSDILVVPQAMGMEVEMLPAKGPHFPDPLVTPKDVTTKLKKKVDVDKELGYV 152
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++I++ R KL + LIGFCGAPWT+ +YM+ GG K + + + ++ LL
Sbjct: 153 YEAIAMTRTKLDGEVPLIGFCGAPWTLMAYMVEGGGSKTFEKAKAWLFKYPEESKELLQR 212
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKYP 238
++DV ++L+ Q+ AG ++Q+FD+ AG L +F ++ + I ++VR + P
Sbjct: 213 IADVCTDFLVGQVKAGAQLLQVFDSWAGELSPSDFRQFSLPFLRSIAASVRDILSTKSIP 272
Query: 239 NAKFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFA---LELQKEG----------- 283
I FAKGA G+ L + + +GLDW+V A ++L G
Sbjct: 273 CPPLIVFAKGALGHSLPEVVK-AGYDVVGLDWTVEPCVARKVVDLASPGKPSYQDASGQN 331
Query: 284 ------PVQGNLDPMRLVVGNQVMIDGVNAIL-----DVLGSGPFIFNLGHGITPQVDPK 332
+QGN+DP L G + + V +L G G +I NLGHGITP VDP+
Sbjct: 332 EAGHRLALQGNMDPAVLYAGKEAIEAKVEEMLRSKKGGFGGGGAYIANLGHGITPGVDPE 391
Query: 333 NVLDLVKTV 341
V +K V
Sbjct: 392 AVRIYLKAV 400
>gi|218697705|ref|YP_002405372.1| uroporphyrinogen decarboxylase [Escherichia coli 55989]
gi|256021682|ref|ZP_05435547.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
gi|293474304|ref|ZP_06664713.1| uroporphyrinogen decarboxylase [Escherichia coli B088]
gi|300907551|ref|ZP_07125189.1| uroporphyrinogen decarboxylase [Escherichia coli MS 84-1]
gi|301302190|ref|ZP_07208322.1| uroporphyrinogen decarboxylase [Escherichia coli MS 124-1]
gi|332282925|ref|ZP_08395338.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
gi|254767694|sp|B7LA91|DCUP_ECO55 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218354437|emb|CAV01247.1| uroporphyrinogen decarboxylase [Escherichia coli 55989]
gi|291321334|gb|EFE60775.1| uroporphyrinogen decarboxylase [Escherichia coli B088]
gi|300400718|gb|EFJ84256.1| uroporphyrinogen decarboxylase [Escherichia coli MS 84-1]
gi|300842353|gb|EFK70113.1| uroporphyrinogen decarboxylase [Escherichia coli MS 124-1]
gi|315252735|gb|EFU32703.1| uroporphyrinogen decarboxylase [Escherichia coli MS 85-1]
gi|323182096|gb|EFZ67506.1| uroporphyrinogen decarboxylase [Escherichia coli 1357]
gi|324115429|gb|EGC09374.1| uroporphyrinogen decarboxylase [Escherichia coli E1167]
gi|332105277|gb|EGJ08623.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
Length = 354
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLVRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|82546339|ref|YP_410286.1| uroporphyrinogen decarboxylase [Shigella boydii Sb227]
gi|123558087|sp|Q31U00|DCUP_SHIBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81247750|gb|ABB68458.1| uroporphyrinogen decarboxylase [Shigella boydii Sb227]
gi|320185963|gb|EFW60711.1| Uroporphyrinogen III decarboxylase [Shigella flexneri CDC 796-83]
gi|332092323|gb|EGI97398.1| uroporphyrinogen decarboxylase [Shigella boydii 3594-74]
Length = 354
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|66801513|ref|XP_629682.1| uroporphyrinogen decarboxylase [Dictyostelium discoideum AX4]
gi|74851092|sp|Q54DF9|DCUP_DICDI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|60463076|gb|EAL61271.1| uroporphyrinogen decarboxylase [Dictyostelium discoideum AX4]
Length = 364
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 186/330 (56%), Gaps = 10/330 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ +G + P+W+MRQAGRYLPE++ +R +F +C TPE ++TLQP+
Sbjct: 15 KNDTFLKACRGEEVPYVPVWIMRQAGRYLPEFKSVRADV-DFFSVCRTPELACKVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDL--FLNY 119
R+ DAAI+FSDILV+ A+G V+ + +GP +PI T +++ + +D+ L Y
Sbjct: 74 DRFPLDAAIIFSDILVVPQAMGIEVQMIPGKGPFFPNPIRTIEDLSRVQFPVDVNKELGY 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F ++++ RK+L + LIGF GAPWT+ +Y I G ++ + Y++ +
Sbjct: 134 ---VFDALTLTRKRLEGRVPLIGFTGAPWTLMTYCIEGSGGTTMSNSKSWLYKHPAESHK 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L L+ V +YL+ QI AG +QIFD+ + L F+ Y + +I V+ +P
Sbjct: 191 FLSMLTRVCIDYLLGQIKAGAQALQIFDSWSNELSPAMFKEYCLPYLVQIGKEVKAVHPE 250
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I FAKG+ + L++ + + +G+DW++ S A E+ + +QGNLDP L G+
Sbjct: 251 IPLICFAKGSNFALEDLSKSGAYDVLGIDWTIEPSVAREMVADRVSLQGNLDPCVLYCGD 310
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITP 327
QV+ D +L G+ I NLGHG+ P
Sbjct: 311 QVIRDQTQKMLQSFGTTKRLIANLGHGMHP 340
>gi|172040595|ref|YP_001800309.1| uroporphyrinogen decarboxylase [Corynebacterium urealyticum DSM
7109]
gi|171851899|emb|CAQ04875.1| uroporphyrinogen decarboxylase [Corynebacterium urealyticum DSM
7109]
Length = 373
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 185/337 (54%), Gaps = 21/337 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L ++G+ + P+W+MRQAGR LPEYR++R+ LD C+ P+ E+T+QP+ R++
Sbjct: 29 LAAVRGDKPSRRPVWMMRQAGRSLPEYRKVREGIP-MLDSCFMPDLLAEITMQPVIRHDA 87
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V A G +V V GP M + + T E P DL + L PI + I
Sbjct: 88 DAAILFSDIVVPLKAAGMDVEIVAGRGPVMGEAVRTSEQIANIP--DLEPDQLGPIVEGI 145
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ ++L LIGF GAP+TVASY+I GG K+H + Y + ++ L++ LS +
Sbjct: 146 EQILERLRTDQVLIGFAGAPFTVASYLIEGGPSKNHEVTKAMMYAEPQLWHALMEKLSPM 205
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
A +L AQI AGVD IQ+FD+ AG L ++ Y A +I+ AVR F
Sbjct: 206 IAHFLQAQIEAGVDAIQLFDSWAGFLTARDYREYVAPYSQKILDAVRPY--GIPMTHFGV 263
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSF-------ALELQKEGPVQGNLDPMRLVVGNQV 300
G G +L + ++ + +G+DW VP++ AL Q QGNLDP L G V
Sbjct: 264 GTGELLVDLAKVG-PDVVGVDWRVPMNVAAKRVQQALPDQTPKAYQGNLDPAVLFAGRDV 322
Query: 301 MIDGVNAI-------LDVLGSGPFIFNLGHGITPQVD 330
+ + V I +++ S IFNLGHG+ P D
Sbjct: 323 IREHVKRIAAEAYEAIELGYSRGHIFNLGHGVMPHTD 359
>gi|194434759|ref|ZP_03067010.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1012]
gi|194416983|gb|EDX33101.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1012]
gi|320179540|gb|EFW54491.1| Uroporphyrinogen III decarboxylase [Shigella boydii ATCC 9905]
gi|332085405|gb|EGI90575.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 155-74]
Length = 354
Score = 205 bits (522), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAL 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|189203601|ref|XP_001938136.1| uroporphyrinogen decarboxylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985235|gb|EDU50723.1| uroporphyrinogen decarboxylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 365
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 186/345 (53%), Gaps = 23/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY + + K +F + C +P+ LTLQPI RY
Sbjct: 13 ILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-NDFFECCRSPDIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ T +E+ ++ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPEPLQTPDDKQYKEVLEREVDVAESLD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 132 Y---VYKAITMTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPEETK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+ +A + I + +
Sbjct: 189 ALLKKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTCFKTFALPYLNHIADNLPARIK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPV-QGNLDP 291
+ FAKGA Y L + T+ N IGLDW P Q +G V QGN DP
Sbjct: 249 SKGLEPVPMTVFAKGAWYALSDLCD-TNYNTIGLDWLHAPAEAYKVAQAKGKVLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G G +I NLGHGITP V P ++
Sbjct: 308 GVLYGTRESITKVVEEMVAGFGGGKQGWIANLGHGITPFVKPDDL 352
>gi|255326982|ref|ZP_05368058.1| uroporphyrinogen decarboxylase [Rothia mucilaginosa ATCC 25296]
gi|255296199|gb|EET75540.1| uroporphyrinogen decarboxylase [Rothia mucilaginosa ATCC 25296]
Length = 393
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 183/335 (54%), Gaps = 12/335 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G + P+W MRQAGR LPEYRQ+R+ LD C TP+ E+T+QP+RR+
Sbjct: 57 MLRALTGRPSSHRPVWFMRQAGRSLPEYRQVREGIP-MLDACLTPDLAAEITVQPVRRHK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQ 125
DA I FSDI++ G NV V +GP +D P+ T E+ L +L + L PI +
Sbjct: 116 VDAGIFFSDIVIPMKLAGVNVDIVPGKGPVLDQPVRTLDEVRALP---ELKDSDLDPIRE 172
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A++ L + +
Sbjct: 173 AVAATVEML-GDTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPAAWHELAAWAA 231
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ ++L AQI AG +Q+FD+ AG LGE ++ Y + VR I F
Sbjct: 232 RTAGQFLRAQIEAGASAVQLFDSWAGSLGEGDYRRYVQAHSATALDMVREY--GVPRIHF 289
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G +L ++ IG+D+ +PLS A L P+QGN+DP L G++ +
Sbjct: 290 GTGTTALLPAMHE-AGADVIGVDYRLPLSAANTLLNGAVPLQGNIDPALLAAGSENLYAH 348
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V+ +L + P + NLGHG+ P DP+ + DLV
Sbjct: 349 VDEVLAEGNAAPSHVVNLGHGVPPTTDPQVLTDLV 383
>gi|3915203|sp|O18601|DCUP_DROVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2317917|gb|AAB66372.1| uroprophyrinogen decarboxylase [Drosophila virilis]
Length = 386
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 187/353 (52%), Gaps = 31/353 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 22 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 80
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L
Sbjct: 81 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPEDLKRLTP--DGALSRLT 138
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L
Sbjct: 139 YVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPEDTKLFL 198
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF------------ENYAARSVGRI 229
L+DV +YL Q+ AG ++Q+F++ A L + EF ++ R ++
Sbjct: 199 ILLTDVIVDYLEMQVIAGAQMLQVFESSAEHLSKEEFLLGSEPYLRRIRDDLVDRLTKKV 258
Query: 230 ISAVR--RKYPNAKF----------ISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFA 276
I AV YPN F I FAKGAG+ LK L + IGLDW+V P+
Sbjct: 259 IPAVPLVSSYPNNIFTLLTYLISLLIIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEAR 317
Query: 277 LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQV 329
+ +QGNLDP + + ++ G +I N+GHGITPQ
Sbjct: 318 AVVGPNITLQGNLDPQSMYCEPNELRSLATEMVHKCGKSRYIANVGHGITPQT 370
>gi|149177574|ref|ZP_01856176.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
gi|148843554|gb|EDL57915.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
Length = 352
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 194/344 (56%), Gaps = 11/344 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + ++ ++ ++ PIW+MRQAGRYLPEY ++R K F+++C TP E+TL
Sbjct: 12 QNSRFMKAVRREPVDTTPIWIMRQAGRYLPEYMEVRNKV-TFIELCKTPALAAEVTLTAQ 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNYLL 121
R DAAILF+D+L I + +G ++ +++ EGP + +PI Q+ ++ D+ ++ L
Sbjct: 71 RVLGVDAAILFADLLPILEPMGLDLEYLKGEGPVIHNPI--QDASQVDRLTDIADMDCLD 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+FQ++ ++R LP I L+GF G P+T+ASY I GG K++ + + Y + A+N L+
Sbjct: 129 FVFQAVKLIRADLPADIPLLGFAGCPFTLASYAIEGGSSKNYRRTKQMMYNDPSAWNALM 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ D YL QI AG +QIFD+ AGCL +++ Y ++++ V+ P
Sbjct: 189 NRFVDNLIVYLQRQIAAGCQAVQIFDSWAGCLSPEDYQQYVQPYTAKLVAGVQDHAP--- 245
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQV 300
I+F G +L +R G+DW + LS A E+ + +QGN+DP+ L V
Sbjct: 246 VINFLTGNPALL-GLQRQAGGQVFGVDWRINLSDAWEIFGSDVAIQGNMDPIVLYAELPV 304
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ A+LD G IFNLGHG+ P ++P +V LV+ V
Sbjct: 305 LKQKAKAVLDAAAGRNGHIFNLGHGVMPDMNPDHVKALVEMVHE 348
>gi|284924089|emb|CBG37188.1| uroporphyrinogen decarboxylase [Escherichia coli 042]
Length = 354
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMYKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|209696255|ref|YP_002264185.1| uroporphyrinogen decarboxylase [Aliivibrio salmonicida LFI1238]
gi|226696370|sp|B6ENB7|DCUP_ALISL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|208010208|emb|CAQ80535.1| uroporphyrinogen decarboxylase [Aliivibrio salmonicida LFI1238]
Length = 355
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 190/350 (54%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E+TLQP+
Sbjct: 5 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAGLASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I + +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGIPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 123 Y---VMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ A+ R+
Sbjct: 180 LLLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDALIRENE 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
+ F K G L+ T +AIGLDW++ ++ A + + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQI-AATGCDAIGLDWTINIADAKKRIGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGS--GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V+ IL+ G+ +FNLGHGI V P+N V V
Sbjct: 299 AQPERIRQEVSTILEGFGNEGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|323974197|gb|EGB69329.1| uroporphyrinogen decarboxylase [Escherichia coli TW10509]
Length = 354
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGCDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|110644332|ref|YP_672062.1| uroporphyrinogen decarboxylase [Escherichia coli 536]
gi|191174306|ref|ZP_03035814.1| uroporphyrinogen decarboxylase [Escherichia coli F11]
gi|300985444|ref|ZP_07177447.1| uroporphyrinogen decarboxylase [Escherichia coli MS 200-1]
gi|123147437|sp|Q0TA68|DCUP_ECOL5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110345924|gb|ABG72161.1| uroporphyrinogen decarboxylase [Escherichia coli 536]
gi|190905438|gb|EDV65069.1| uroporphyrinogen decarboxylase [Escherichia coli F11]
gi|300306536|gb|EFJ61056.1| uroporphyrinogen decarboxylase [Escherichia coli MS 200-1]
gi|324015270|gb|EGB84489.1| uroporphyrinogen decarboxylase [Escherichia coli MS 60-1]
Length = 354
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVLPEHAGVFVEAV 345
>gi|238756050|ref|ZP_04617373.1| Uroporphyrinogen decarboxylase [Yersinia ruckeri ATCC 29473]
gi|238705717|gb|EEP98111.1| Uroporphyrinogen decarboxylase [Yersinia ruckeri ATCC 29473]
Length = 354
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 189/349 (54%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEHE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY---VMNAVRTIRRELKGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + + +I++ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLQYMHKIVAGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ F KG L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGRQWLEAM-AATGCDALGLDWTMDIAEARHRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPAERIQQEVGTILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|327402534|ref|YP_004343372.1| Uroporphyrinogen decarboxylase [Fluviicola taffensis DSM 16823]
gi|327318042|gb|AEA42534.1| Uroporphyrinogen decarboxylase [Fluviicola taffensis DSM 16823]
Length = 345
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 186/342 (54%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G I P+WLMRQAGR LPEYR +R+ F ++ TP E+T+QP+
Sbjct: 8 ILRAAKGEDIERYPVWLMRQAGRILPEYRAVRESVSGFKELVETPALAAEVTIQPVDILG 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDL--FLNYLLPI 123
DAAI+FSDILV+ +A+ + +E GP + + +E L + D+ L Y+L
Sbjct: 68 VDAAIIFSDILVVPEAMNVPYQMIEKRGPWFEHTIRSEEEAKRLEFDFDIEDRLGYVL-- 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I + K+L + +IGF GAPWT+ YM+ G K + R Y N + LL
Sbjct: 126 -EAIKLTVKQLDGRVPVIGFAGAPWTILCYMVEGHGSKTFSEARKLLYTNPTLAHQLLQH 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++DV+ YL AQ+ AG +IQ+FD+ AG LG ++ ++ + +I SA+ +
Sbjct: 185 VTDVTIAYLKAQVKAGASMIQVFDSWAGILGTEQYATFSLPYLSQIASAIE----DVPVT 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMI 302
F+KGA + +L D N IGLDW++ ++ L +QGNLDP L +Q +
Sbjct: 241 LFSKGAITSIPALAKL-DCNTIGLDWNMDVAAMRALVGNSKTLQGNLDPCALYGSHQSIE 299
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L+ G+ I NLGHG+ P VDP+ V +KTV+S
Sbjct: 300 LETIKMLNSFGNNQRHIVNLGHGVYPDVDPEKVKTFIKTVKS 341
>gi|229527007|ref|ZP_04416403.1| uroporphyrinogen III decarboxylase [Vibrio cholerae 12129(1)]
gi|229335530|gb|EEO01011.1| uroporphyrinogen III decarboxylase [Vibrio cholerae 12129(1)]
Length = 359
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 190/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNID 114
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + PI + +I + +P +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPIICKADVDKIGIPDPEGE 124
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 125 --LQY---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ +
Sbjct: 180 AVLHALLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLI 239
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T +A+GLDW++ ++ A + + +QGN+DP
Sbjct: 240 RENEGRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 SILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 352
>gi|161505345|ref|YP_001572457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189083017|sp|A9MHD2|DCUP_SALAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160866692|gb|ABX23315.1| hypothetical protein SARI_03490 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 354
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+ + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMELGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L ++++++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQHFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEDEVATILSGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|283787330|ref|YP_003367195.1| uroporphyrinogen decarboxylase [Citrobacter rodentium ICC168]
gi|282950784|emb|CBG90460.1| uroporphyrinogen decarboxylase [Citrobacter rodentium ICC168]
Length = 354
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACRADVDKLPVPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPHT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEEEVATILSAFGEGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|24115281|ref|NP_709791.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 301]
gi|30064721|ref|NP_838892.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|110807847|ref|YP_691367.1| uroporphyrinogen decarboxylase [Shigella flexneri 5 str. 8401]
gi|45476893|sp|Q83PB7|DCUP_SHIFL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123146462|sp|Q0SY03|DCUP_SHIF8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|228311952|pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Shigella Flexineri: New Insights Into Its Catalytic
Mechanism
gi|24054575|gb|AAN45498.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 301]
gi|30042981|gb|AAP18703.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|110617395|gb|ABF06062.1| uroporphyrinogen decarboxylase [Shigella flexneri 5 str. 8401]
gi|313648647|gb|EFS13087.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|332751449|gb|EGJ81851.1| uroporphyrinogen decarboxylase [Shigella flexneri 4343-70]
gi|332762848|gb|EGJ93107.1| uroporphyrinogen decarboxylase [Shigella flexneri 2930-71]
gi|332765546|gb|EGJ95760.1| uroporphyrinogen decarboxylase [Shigella flexneri K-671]
gi|332998962|gb|EGK18552.1| uroporphyrinogen decarboxylase [Shigella flexneri K-218]
gi|333010730|gb|EGK30158.1| uroporphyrinogen decarboxylase [Shigella flexneri VA-6]
gi|333014359|gb|EGK33712.1| uroporphyrinogen decarboxylase [Shigella flexneri K-304]
Length = 354
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 185/346 (53%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R +L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|311111785|ref|YP_003983007.1| uroporphyrinogen decarboxylase [Rothia dentocariosa ATCC 17931]
gi|310943279|gb|ADP39573.1| uroporphyrinogen decarboxylase [Rothia dentocariosa ATCC 17931]
Length = 395
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 175/335 (52%), Gaps = 12/335 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L G P+W MRQAGR LPEYR+ R+ LD C TPE E+T+QP+RR+
Sbjct: 59 MLQALTGRASEHRPVWFMRQAGRSLPEYRKAREGIP-MLDACLTPELAAEITVQPVRRHK 117
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQ 125
DA I FSDI++ G NV V GP ++ P+ T E+ L D L+ PI +
Sbjct: 118 VDAGIFFSDIVIPMKLAGVNVDIVPGRGPVLEHPVRTLDEVRALPELTDAALD---PIRE 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A+ L + +
Sbjct: 175 SVAATVEML-GSTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPVAWRELAQWAA 233
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ ++L AQI AG +Q+FD+ AG LGE ++ Y + V I F
Sbjct: 234 RTAGQFLRAQIEAGASAVQLFDSWAGSLGEADYRRYVQEHSAAALGMVEEF--GVPRIHF 291
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L ++ IG+D+ +PL A L P+QGN+DP L G + +
Sbjct: 292 GTGTAELLPAMHE-AGADVIGVDYRLPLDEANRRLNGAVPLQGNIDPALLAAGRETLYAH 350
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ +L S P I NLGHG+ P DP+ + DLV
Sbjct: 351 ADEVLAAGASAPAHIVNLGHGVPPTTDPQVLTDLV 385
>gi|262401575|ref|ZP_06078142.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC586]
gi|262352290|gb|EEZ01419.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC586]
Length = 360
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 188/350 (53%), Gaps = 16/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+
Sbjct: 9 KNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT + +I + +P + L
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE--LQ 126
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 127 Y---VMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 184 ALLNKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENE 243
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 244 GRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILY 302
Query: 296 VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +IL G G +FNLGHGI V P+N V V
Sbjct: 303 APAPRIREEVASILAGFGQGETGHVFNLGHGIHLDVPPENAGVFVDAVHE 352
>gi|294625972|ref|ZP_06704583.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599710|gb|EFF43836.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 354
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 196/354 (55%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFRLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 297 GSPEAIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQS 350
>gi|289664454|ref|ZP_06486035.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670638|ref|ZP_06491713.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 354
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 197/354 (55%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGEGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 297 GSPEAIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQS 350
>gi|255941102|ref|XP_002561320.1| Pc16g10100 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585943|emb|CAP93680.1| Pc16g10100 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 363
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 189/346 (54%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEYHEA-KGGRDFFECCRSPEVASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMVVEMVDKKGPHFPEPLDSPTDGQYEKVMAKKVDVKAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 132 Y---VYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGSKLFVQSKKWVYKYPTEAQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + ++
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPKRLQ 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L + L DS N +GLDW + A+ + +QGN D
Sbjct: 249 EMGLEPVPMTVFAKGAWYALDD---LCDSGYNVVGLDWLHDAAEAMRIANGRVTIQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + V +++ G +I NLGHG+TP VDP+N+
Sbjct: 306 PGMLYGGPPAITATVEPMVEGFKKGKQGWICNLGHGVTPFVDPENL 351
>gi|134108774|ref|XP_777040.1| hypothetical protein CNBB5660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259723|gb|EAL22393.1| hypothetical protein CNBB5660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 380
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 23/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY- 66
+L G P+W+MRQAGRYLPE+ ++RK +F + C TP LTLQPI RY
Sbjct: 27 LLRAASGEETPRAPVWVMRQAGRYLPEFLEVRKH-HSFFECCQTPSLASALTLQPIDRYP 85
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDL--FLNYLLP 122
DA+I+F DILV+ ALG V + GP + +P +T +I L ++D+ L Y
Sbjct: 86 RLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDIKRLRKDVDVQKELGY--- 142
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + LL
Sbjct: 143 VFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHELLR 202
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-----KY 237
++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V +
Sbjct: 203 RIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQLSH 262
Query: 238 PNAKFISFAKGAG----YMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPM 292
P + FAKGA + L + T +GLDW+V P+ + K+ +QGN DP
Sbjct: 263 PGVRITLFAKGANTPSTFSLLSDPAQTGYATLGLDWTVDPVEVREIVGKKVNLQGNFDPT 322
Query: 293 RLVVGNQVM---IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L G + + ++ ++A G G +I NLGHGITP V P+++
Sbjct: 323 VLYGGKEGIEKEVERLSARWKKAGGG-WIANLGHGITPNVKPEDM 366
>gi|121607014|ref|YP_994821.1| uroporphyrinogen decarboxylase [Verminephrobacter eiseniae EF01-2]
gi|166234294|sp|A1WDU6|DCUP_VEREI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121551654|gb|ABM55803.1| uroporphyrinogen decarboxylase [Verminephrobacter eiseniae EF01-2]
Length = 370
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 185/344 (53%), Gaps = 26/344 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY+ R + +F+ + + +Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYQASRARAGSFMGLATSVDYATEVTLQPLERFPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIY---LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F E EGPR+ + E L P++ L Y +F +++ +R+ L
Sbjct: 84 PDAMGLGLSFAEGEGPRLAKVVRDEATVAALAVPDM-ARLRY---VFDAVASIRRALNGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGRGSDDYRLVKGLMYSRPDLMHRILAINADTVAAYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + +FD+ G L + F+ ++ R+++ ++R + I F KG L+
Sbjct: 200 AGAQAVMVFDSWGGVLADGAFQAFSLAYTARVLAQLQRTGVDGSDVPRIVFTKGGAPWLQ 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL---QKEGP---VQGNLDPMRLVVGNQVMIDGVNAI 308
+ + L D +GLDW+ L+ A L GP +QGN+DP L+ ++ V +
Sbjct: 260 DMQSL-DCQVLGLDWTANLASARALVGGAVGGPGKALQGNIDPHVLLAPPARIVQQVQQV 318
Query: 309 LDVLG--------SGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
LD G +GP IFNLGHGI+ P +V LV+ V S
Sbjct: 319 LDSFGPPHTDRSTTGPTHIFNLGHGISQFTPPAHVAALVEAVHS 362
>gi|283457691|ref|YP_003362277.1| uroporphyrinogen-III decarboxylase [Rothia mucilaginosa DY-18]
gi|283133692|dbj|BAI64457.1| uroporphyrinogen-III decarboxylase [Rothia mucilaginosa DY-18]
Length = 442
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 185/335 (55%), Gaps = 12/335 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G + P+W MRQAGR LPEYRQ+R+ LD C TP+ E+T+QP+RR+
Sbjct: 107 MLRALTGRPSSHRPVWFMRQAGRSLPEYRQVREGIP-MLDACLTPDLAAEITVQPVRRHK 165
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQ 125
DA I FSDI++ G NV V +GP +D P+ T E+ L +L + L PI +
Sbjct: 166 VDAGIFFSDIVIPMKLAGVNVDIVPGKGPVLDQPVRTLDEVRDLP---ELKDSDLDPIRE 222
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A++ L + +
Sbjct: 223 AVAATVEML-GDTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPAAWHELAAWAA 281
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ ++L AQI AG +Q+FD+ AG LGE ++ Y + V R+Y I F
Sbjct: 282 RTAGQFLRAQIEAGASAVQLFDSWAGSLGESDYRRYVQAHSATALDMV-REY-GVPRIHF 339
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G +L ++ IG+D+ +PLS A L P+QGN+DP L G++ +
Sbjct: 340 GTGTTALLPAMHE-AGADVIGVDYRLPLSAANTLLNGAVPLQGNIDPALLAAGSENLYAH 398
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V+ +L + P + NLGHG+ P DP+ + DLV
Sbjct: 399 VDEVLAEGNAAPSHVVNLGHGVPPTTDPQVLTDLV 433
>gi|300741891|ref|ZP_07071912.1| uroporphyrinogen decarboxylase [Rothia dentocariosa M567]
gi|300381076|gb|EFJ77638.1| uroporphyrinogen decarboxylase [Rothia dentocariosa M567]
Length = 395
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 176/335 (52%), Gaps = 12/335 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L G P+W MRQAGR LPEYR+ R+ LD C TPE E+T+QP+RR+
Sbjct: 59 MLQALTGRASEHRPVWFMRQAGRSLPEYRKAREGIP-MLDACLTPELAAEITVQPVRRHK 117
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQ 125
DA I FSDI++ G +V V GP ++ P+ T E+ L D L+ PI +
Sbjct: 118 VDAGIFFSDIVIPMKLAGVDVDIVPGRGPVLEHPVRTLDEVRALPELTDTALD---PIRE 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ L LIGF GAP+TVA+YM+ GG +DH + R + + A+ L + +
Sbjct: 175 AVAATVDML-GSTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPVAWRELAQWAA 233
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
S ++L AQI AG +Q+FD+ AG LGE ++ Y +S V I F
Sbjct: 234 RTSGQFLRAQIEAGASAVQLFDSWAGSLGEADYRRYVQEHSAAALSMVEEF--GVPRIHF 291
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L ++ IG+D+ +PL A L P+QGN+DP L G + +
Sbjct: 292 GTGTADLLPAMHE-AGADVIGVDYRLPLDEANRRLNGAVPLQGNIDPALLAAGRETLYAH 350
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V+ +L S P I NLGHG+ P DP+ + DLV
Sbjct: 351 VDEVLAAGASAPAHIVNLGHGVPPTTDPQVLTDLV 385
>gi|58262678|ref|XP_568749.1| uroporphyrinogen decarboxylase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223399|gb|AAW41442.1| uroporphyrinogen decarboxylase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 380
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 194/345 (56%), Gaps = 23/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY- 66
+L G P+W+MRQAGRYLPE+ ++RK +F + C TP LTLQPI RY
Sbjct: 27 LLRAASGEETPRAPVWVMRQAGRYLPEFLEVRKH-HSFFECCQTPSLASALTLQPIDRYP 85
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDL--FLNYLLP 122
DA+I+F DILV+ ALG V + GP + +P +T +I L ++D+ L Y
Sbjct: 86 RLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDIKRLRKDVDVQKELGY--- 142
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + LL
Sbjct: 143 VFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHELLR 202
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-----KY 237
++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V +
Sbjct: 203 RIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQLSH 262
Query: 238 PNAKFISFAKGAG----YMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPM 292
P + FAKGA + L + T +GLDW+V P+ + K+ +QGN DP
Sbjct: 263 PGVRITLFAKGANTPSTFSLLSDPAQTGYATLGLDWTVDPVEVREIVGKKVNLQGNFDPT 322
Query: 293 RLVVGNQVM---IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L G + + ++ ++A G G +I NLGHGITP V P+++
Sbjct: 323 VLYGGKEGIEKEVERLSARWKEAGGG-WIANLGHGITPNVKPEDM 366
>gi|269137538|ref|YP_003294238.1| uroporphyrinogen decarboxylase [Edwardsiella tarda EIB202]
gi|267983198|gb|ACY83027.1| uroporphyrinogen decarboxylase [Edwardsiella tarda EIB202]
gi|304557612|gb|ADM40276.1| Uroporphyrinogen III decarboxylase [Edwardsiella tarda FL6-60]
Length = 354
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY R + NF+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYNATRAQAGNFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLN-PNIDLF 116
LQP+RR+ DAAILFSDIL + DA+G + F EGPR P+T +I L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTHPVTCHADIQRLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + Y + A
Sbjct: 121 LGY---VMDAVRTIRRDLRGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSDPAA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L ++ ++ R + +I+ ++R+
Sbjct: 178 LHLLLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLQRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 SEGRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTCDIADARRRVGDRVALQGNMDPSL 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL G G + NLGHGI P V P++ V V
Sbjct: 297 LYAPPARIEQEVATILAGFGQGEGHVCNLGHGIHPDVPPEHAGVFVDAV 345
>gi|332998855|gb|EGK18450.1| uroporphyrinogen decarboxylase [Shigella flexneri K-272]
gi|333014315|gb|EGK33669.1| uroporphyrinogen decarboxylase [Shigella flexneri K-227]
Length = 354
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 185/346 (53%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R +L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PGRIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|1750399|gb|AAB39261.1| HemE-like protein [Pseudomonas aeruginosa PAO1]
Length = 295
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 169/295 (57%), Gaps = 11/295 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLN-PNIDLFLNY 119
RY DAAILFSDIL I DA+G+ + F EGPR + + +I L P+ + L Y
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 125 ---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHA 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 182 LLDKLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDG 241
Query: 240 AK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
+ I F KG G L++ + + A+GLDW+ + A + + +QGN+DP
Sbjct: 242 RRVPVILFTKGGGLWLESMAEVG-AEALGLDWTCDIGSARARVGERVALQGNMDP 295
>gi|227355204|ref|ZP_03839613.1| uroporphyrinogen decarboxylase [Proteus mirabilis ATCC 29906]
gi|227164713|gb|EEI49567.1| uroporphyrinogen decarboxylase [Proteus mirabilis ATCC 29906]
Length = 361
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 189/350 (54%), Gaps = 12/350 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+T
Sbjct: 5 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGDFISLCKNTELACEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLN-PNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI + +I L P+ +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKTPINSLDDIKKLPIPDPEDE 124
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R L ++ LIGF G+PWT+A+YMI GG K + + Y +A
Sbjct: 125 LGY---VMNAVRAIRHALQGNVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYSEPQA 181
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG I IFDT G L +++ ++ + + +I+ + R+
Sbjct: 182 LHLLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLQYMHKIVDGLIRE 241
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW++ + A + + +QGN+DP
Sbjct: 242 NEGRKVPVTLFTKGGGRWLEAMAA-TGCDALGLDWTIDIEDARRRVGDKVALQGNMDPSM 300
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V IL G G +FNLGHGI V P + + V
Sbjct: 301 LYAPPARIEQEVATILAGFGKGTGHVFNLGHGIHQDVPPAHAGAFIDAVH 350
>gi|121702781|ref|XP_001269655.1| uroporphyrinogen decarboxylase [Aspergillus clavatus NRRL 1]
gi|119397798|gb|EAW08229.1| uroporphyrinogen decarboxylase [Aspergillus clavatus NRRL 1]
Length = 363
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C TPE LTLQPI RY
Sbjct: 13 LLRAARGEQVPRPPIWVMRQAGRYLPEYHEAKAN-RDFFECCRTPEIASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVDVKEELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKMFVQSKTWIYKYPKESQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG + F+ +A + I + + +K
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGEMSPATFKTFALPYLRYISANLPKKLD 248
Query: 237 ---YPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L++ L +S N +GLDW + A+ + +QGN D
Sbjct: 249 EMGLERVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAMNIANGRVTIQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + + V ++ G +I NLGHGITP V P ++
Sbjct: 306 PGVLYGGRAAITEAVEIMVKGFRGGKQGWIANLGHGITPFVKPDDL 351
>gi|238794949|ref|ZP_04638546.1| Uroporphyrinogen decarboxylase [Yersinia intermedia ATCC 29909]
gi|238725707|gb|EEQ17264.1| Uroporphyrinogen decarboxylase [Yersinia intermedia ATCC 29909]
Length = 355
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 186/351 (52%), Gaps = 12/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRGVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + V+ IL G G +FNLGHGI V P++ V V +
Sbjct: 297 LYAPPARIEQEVSTILASFGQGQGHVFNLGHGIHQDVPPEHAGAFVDAVHT 347
>gi|197286603|ref|YP_002152475.1| uroporphyrinogen decarboxylase [Proteus mirabilis HI4320]
gi|238056495|sp|B4EYT8|DCUP_PROMH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194684090|emb|CAR45475.1| uroporphyrinogen decarboxylase [Proteus mirabilis HI4320]
Length = 357
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 188/350 (53%), Gaps = 12/350 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI + + L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKTPINSLDDIKKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R L ++ LIGF G+PWT+A+YMI GG K + + Y +A
Sbjct: 121 LGY---VMNAVRAIRHALQGNVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYSEPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG I IFDT G L +++ ++ + + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLQYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW++ + A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGRWLEAM-AATGCDALGLDWTIDIEDARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V IL G G +FNLGHGI V P + + V
Sbjct: 297 LYAPPARIEQEVATILAGFGKGTGHVFNLGHGIHQDVPPAHAGAFIDAVH 346
>gi|194752633|ref|XP_001958625.1| GF12476 [Drosophila ananassae]
gi|190619923|gb|EDV35447.1| GF12476 [Drosophila ananassae]
Length = 356
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 16/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI ++ L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIKVPDDLKRLTP--DGALSRLS 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L
Sbjct: 128 YVGDAITMMRHKLDGRVPLIGFSGAPWTLMGYMIEGGGSKTMSKTKAWLKDYPEDSKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F ++ + RI + ++
Sbjct: 188 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEDFLEWSVPYLRRIRDELVDRLNKKV 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMR 293
P FAKGAG+ LK L + IGLDW+V A L GP +QGNLDP
Sbjct: 248 IPVVPITLFAKGAGHSLKEQSELG-YDVIGLDWTVDPIEARNLV--GPNITLQGNLDPQD 304
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 305 MYRNPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPLASMEVLVEAV 352
>gi|325499271|gb|EGC97130.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ECD227]
Length = 354
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 186/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ +L AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLHLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|292486744|ref|YP_003529614.1| uroporphyrinogen decarboxylase [Erwinia amylovora CFBP1430]
gi|291552161|emb|CBA19198.1| uroporphyrinogen decarboxylase [Erwinia amylovora CFBP1430]
Length = 356
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQE 121
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 122 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQT 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 179 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLRE 238
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 239 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDMADARRRVGDRVALQGNMDPSM 297
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 298 LYASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 346
>gi|261340909|ref|ZP_05968767.1| uroporphyrinogen decarboxylase [Enterobacter cancerogenus ATCC
35316]
gi|288316964|gb|EFC55902.1| uroporphyrinogen decarboxylase [Enterobacter cancerogenus ATCC
35316]
Length = 354
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADVDKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAL-AATGCDALGLDWTTDIGEARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V+ IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAQPARIEEEVSTILSAFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|292897975|ref|YP_003537344.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC 49946]
gi|291197823|emb|CBJ44918.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC 49946]
Length = 355
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDMADARRRVGDRVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 345
>gi|238790626|ref|ZP_04634391.1| Uroporphyrinogen decarboxylase [Yersinia frederiksenii ATCC 33641]
gi|238721295|gb|EEQ12970.1| Uroporphyrinogen decarboxylase [Yersinia frederiksenii ATCC 33641]
Length = 354
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPKT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L++ YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAESVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYAEFSLSYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSI 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V+ IL G G +FNLGHGI V P++ V V
Sbjct: 297 LYAPPARIEQEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAV 345
>gi|294665138|ref|ZP_06730440.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605099|gb|EFF48448.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 354
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 196/354 (55%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 297 GSPEAIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQS 350
>gi|328773206|gb|EGF83243.1| hypothetical protein BATDEDRAFT_84792 [Batrachochytrium
dendrobatidis JAM81]
Length = 393
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 191/342 (55%), Gaps = 21/342 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL V +G + P+W+MRQAGRYLPE+RQ R++ +F +C +PE E+TLQPI RY+
Sbjct: 33 ILRVARGESVERVPVWIMRQAGRYLPEFRQARER-NDFFTICRSPELACEVTLQPIDRYD 91
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR-----MDPITTQEIYLLNPNIDLFLNYL 120
DA+I+F DILV+ ALG V+ + +GP +DP + + N+D L Y
Sbjct: 92 GLLDASIIFCDILVVPQALGLEVQMLPKQGPHFPAPLVDPTHMSRL-VEKVNVDRDLGY- 149
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++++I++ RKKL + L GF GAPWT+ +YMI GG K + + + Y+ + + L
Sbjct: 150 --VYEAITLTRKKLDGRVPLFGFAGAPWTLMAYMIEGGGSKTLNKAKTWLYKYPKESHAL 207
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
L +DV EYL+ Q +G ++Q+FD+ AG L +FE ++ + +++ V++
Sbjct: 208 LQRTTDVIVEYLVGQAKSGAQLLQVFDSWAGMLSPSQFELFSLPYLKQVVERVKKSLADL 267
Query: 239 ----NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMR 293
N FA GA + L+ L + + +DW++ P S L + +QGN DP
Sbjct: 268 PTPLNPPISVFALGAHHALEKLATL-GYDIVQVDWTMDPTSVRSRLGDKVTLQGNADPSL 326
Query: 294 LVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNV 334
L + + V ++D G+ +I NLGHG+ P DP+++
Sbjct: 327 LYGDRETIRIAVKKMMDGFGTRSHYIANLGHGMYPDHDPEHL 368
>gi|31793850|ref|NP_856343.1| uroporphyrinogen decarboxylase [Mycobacterium bovis AF2122/97]
gi|45476849|sp|Q7TY47|DCUP_MYCBO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|31619444|emb|CAD94882.1| PUTATIVE UROPORPHYRINOGEN DECARBOXYLASE HEME (UROPORPHYRINOGEN III
DECARBOXYLASE) (URO-D) (UPD) [Mycobacterium bovis
AF2122/97]
Length = 357
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 84 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 200 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 259
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 260 TAGERPGRGGVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDG 319
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 320 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 356
>gi|332083886|gb|EGI89099.1| uroporphyrinogen decarboxylase [Shigella boydii 5216-82]
Length = 354
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIVDARRRVGNKVALQGNMDPSMLYAL 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|332973060|gb|EGK10997.1| uroporphyrinogen decarboxylase [Kingella kingae ATCC 23330]
Length = 354
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 183/340 (53%), Gaps = 10/340 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L ++ PIW+MRQAGRYLPEYR R + F+D+C ++ E+T+QP+ R++
Sbjct: 10 LRALLRQPVDYTPIWMMRQAGRYLPEYRATRAQAGGFMDLCKNTDFATEVTIQPLERFDL 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL + DA+G + F EGP+ PI T+ ++ L L Y +F +
Sbjct: 70 DAAILFSDILTVPDAMGLGLYFETGEGPKFTKPIQTEADVNALRVPDMANLRY---VFDA 126
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +R L + LIGF G+P+T+A YM+ GG K+ + Y + +LD +
Sbjct: 127 VKSIRSALNGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDVNAQ 186
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFIS 244
YL QI G +QIFDT G L + F+ ++ R + +IIS ++R+ N I
Sbjct: 187 AVTAYLNEQIAHGAQAVQIFDTWGGVLSDVAFQAFSLRYMKQIISGLKRENENRCVPVIV 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F KG G L++ + + ++A+GLDW+ ++ A + + +QGN DP L +
Sbjct: 247 FTKGGGQWLESMAQ-SGADALGLDWTTNIAQARARVGDKVALQGNFDPFALFGTPDAIKA 305
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
IL G+G +FNLGHGI P++ LV TV
Sbjct: 306 EAARILADFGNGSGHVFNLGHGINQHAAPEHAKILVDTVH 345
>gi|120437550|ref|YP_863236.1| uroporphyrinogen decarboxylase [Gramella forsetii KT0803]
gi|166234251|sp|A0M6C4|DCUP_GRAFK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117579700|emb|CAL68169.1| uroporphyrinogen decarboxylase [Gramella forsetii KT0803]
Length = 341
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 193/342 (56%), Gaps = 12/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L+G + PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T+ PIR+
Sbjct: 7 LLKALKGESVERPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCRTPELATEITVMPIRQIG 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIF 124
DAAILFSDILV+ A+ V GP + +PI + + ++ P+++ L Y +F
Sbjct: 66 PDAAILFSDILVVPQAMNIEVEMKPGVGPWLPNPIDSPKKVEQVIVPDVNEELGY---VF 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I + +++L + + LIGF G+PWT+ Y + G K + + F + N A + LL +
Sbjct: 123 EAIKMTKQELNDEVPLIGFAGSPWTILCYCVQGQGSKTFDKAKRFCFMNPIAAHTLLQKI 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + YL ++ AGVD +Q+FD+ G L +++ ++ + + +II A++ + P I+
Sbjct: 183 TDTTIAYLKEKVKAGVDAVQLFDSWGGLLEPKDYQEFSWKYMQQIIEALKDEVP---VIA 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMID 303
+ KG + L + + + A+G+DW+ A L E +QGN DP RL +
Sbjct: 240 YGKGCWFALDKMAK-SGAAALGVDWTCEARNARYLSGGEITLQGNFDPARLYSKPIEIKY 298
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
VN ++ G +I NLGHGI P + N V V+ K
Sbjct: 299 MVNDMIKAFGKDRYIANLGHGILPNIPVDNAKAFVDAVKEYK 340
>gi|289553536|ref|ZP_06442746.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
605]
gi|289438168|gb|EFD20661.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
605]
Length = 360
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 28 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 86
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 87 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 142
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 143 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 202
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 203 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 262
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 263 TAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDG 322
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 323 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 359
>gi|259906945|ref|YP_002647301.1| uroporphyrinogen decarboxylase [Erwinia pyrifoliae Ep1/96]
gi|224962567|emb|CAX54022.1| Uroporphyrinogen decarboxylase [Erwinia pyrifoliae Ep1/96]
Length = 355
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 184/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 178 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDMADARRRVGDRVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L ++ V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIVQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 345
>gi|15609815|ref|NP_217194.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Rv]
gi|121638553|ref|YP_978777.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662519|ref|YP_001284042.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
gi|148823868|ref|YP_001288622.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis F11]
gi|215404642|ref|ZP_03416823.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis 02_1987]
gi|215428104|ref|ZP_03426023.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T92]
gi|215431618|ref|ZP_03429537.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|215446932|ref|ZP_03433684.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|218754415|ref|ZP_03533211.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis GM 1503]
gi|224991045|ref|YP_002645734.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798240|ref|YP_003031241.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
1435]
gi|254232784|ref|ZP_04926111.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis C]
gi|254551734|ref|ZP_05142181.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187695|ref|ZP_05765169.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CPHL_A]
gi|260201805|ref|ZP_05769296.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|260205988|ref|ZP_05773479.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis K85]
gi|289444220|ref|ZP_06433964.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|289448333|ref|ZP_06438077.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CPHL_A]
gi|289575376|ref|ZP_06455603.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
K85]
gi|289746479|ref|ZP_06505857.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
02_1987]
gi|289751330|ref|ZP_06510708.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
T92]
gi|289754780|ref|ZP_06514158.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|289758806|ref|ZP_06518184.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|289762849|ref|ZP_06522227.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis GM
1503]
gi|294994229|ref|ZP_06799920.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis 210]
gi|297635286|ref|ZP_06953066.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
4207]
gi|297732282|ref|ZP_06961400.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
R506]
gi|307085372|ref|ZP_07494485.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu012]
gi|313659615|ref|ZP_07816495.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
V2475]
gi|6014939|sp|O53231|DCUP_MYCTU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234255|sp|A1KM16|DCUP_MYCBP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234259|sp|A5U630|DCUP_MYCTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767698|sp|C1AFD7|DCUP_MYCBT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2791429|emb|CAA16021.1| PROBABLE UROPORPHYRINOGEN DECARBOXYLASE HEME (UROPORPHYRINOGEN III
DECARBOXYLASE) (URO-D) (UPD) [Mycobacterium tuberculosis
H37Rv]
gi|121494201|emb|CAL72679.1| Putative uroporphyrinogen decarboxylase hemE [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124601843|gb|EAY60853.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis C]
gi|148506671|gb|ABQ74480.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
gi|148722395|gb|ABR07020.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
F11]
gi|224774160|dbj|BAH26966.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319743|gb|ACT24346.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
1435]
gi|289417139|gb|EFD14379.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|289421291|gb|EFD18492.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CPHL_A]
gi|289539807|gb|EFD44385.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
K85]
gi|289687007|gb|EFD54495.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
02_1987]
gi|289691917|gb|EFD59346.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
T92]
gi|289695367|gb|EFD62796.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|289710355|gb|EFD74371.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis GM
1503]
gi|289714370|gb|EFD78382.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|308365083|gb|EFP53934.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu012]
gi|323718673|gb|EGB27835.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CDC1551A]
gi|326904292|gb|EGE51225.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
W-148]
gi|328458012|gb|AEB03435.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
4207]
Length = 357
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 84 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 200 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 259
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 260 TAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDG 319
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 320 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 356
>gi|157147206|ref|YP_001454525.1| uroporphyrinogen decarboxylase [Citrobacter koseri ATCC BAA-895]
gi|166234245|sp|A8AKS6|DCUP_CITK8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157084411|gb|ABV14089.1| hypothetical protein CKO_02989 [Citrobacter koseri ATCC BAA-895]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V IL G G +FNLGHGI V P++ V V
Sbjct: 297 LYAPPARIEEEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAV 345
>gi|308232208|ref|ZP_07415295.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu001]
gi|308369824|ref|ZP_07419197.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu002]
gi|308372365|ref|ZP_07428403.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu004]
gi|308378062|ref|ZP_07481397.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu009]
gi|308379279|ref|ZP_07485732.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu010]
gi|308380438|ref|ZP_07669195.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu011]
gi|308214615|gb|EFO74014.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu001]
gi|308326261|gb|EFP15112.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu002]
gi|308333432|gb|EFP22283.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu004]
gi|308353699|gb|EFP42550.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu009]
gi|308357545|gb|EFP46396.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu010]
gi|308361479|gb|EFP50330.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu011]
Length = 366
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 93 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 148
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 149 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 208
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 209 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 268
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 269 TAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDG 328
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 329 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 365
>gi|283476739|emb|CAY72574.1| uroporphyrinogen decarboxylase [Erwinia pyrifoliae DSM 12163]
Length = 356
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 184/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPEQE 121
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 122 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 179 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHE 238
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 239 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDMADARRRVGDRVALQGNMDPSM 297
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L ++ V IL G G +FNLGHGI V P++ V+ V
Sbjct: 298 LYASPARIVQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 346
>gi|86605095|ref|YP_473858.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-3-3Ab]
gi|123507755|sp|Q2JX97|DCUP_SYNJA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86553637|gb|ABC98595.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-3-3Ab]
Length = 362
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 14/342 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G V++ PP+W+MRQAGRY+ YR+++ K+ F C PE +E++LQP R +
Sbjct: 20 RLLRAARGEVVDRPPVWMMRQAGRYMAAYRELQSKY-TFKQRCEIPELAIEISLQPFRAF 78
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDP-----ITTQEIYLLNPNIDLFLNYLL 121
D I+FSDIL + +G VE +GP +DP ++I LL P L
Sbjct: 79 APDGVIMFSDILTPLEGMGIPFELVEQQGPIIDPPIRSQAQVEQIRLLEPEESL------ 132
Query: 122 PIFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P ++I S LR+++ TL+GF G+PWT+A Y + G KD+ + A+ + + L
Sbjct: 133 PFIKTILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFTQPQVLHQL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D A Y+I QI G V+Q+FDT AG L ++E +A +I+ V+ + P
Sbjct: 193 LSKLADSIARYVIYQIECGAQVVQLFDTWAGQLSPGDYETWALPYQKQIVDQVKARCPQV 252
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + LDW ++ A VQGNLDPM L+ +
Sbjct: 253 PLILYINGSAALLERVGK-AGIDVFSLDWMSDMAEARARLGSLAVQGNLDPMVLLGSPKF 311
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ GS I NLGHG+ NV +TVR
Sbjct: 312 IRQRTLEVIQKAGSRGHIMNLGHGVHHTTPEANVHHFFETVR 353
>gi|329296843|ref|ZP_08254179.1| uroporphyrinogen decarboxylase [Plautia stali symbiont]
Length = 355
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I D +G + F EGPR PI + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDTMGLGLYFETGEGPRFSHPIACRADVDKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
LNY + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LNY---VMNAVRTIRHNLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L++ YL AQI AG + +FDT G L ++ ++ + +I+ +V +
Sbjct: 178 LHALLDKLAESVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLYYMHKIVDSVLHE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ + A + + +QGN+DP
Sbjct: 238 NEGRRVPITLFTKGGGQWLEEM-AATGCDALGLDWTTDIGEARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G+G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEQEVAGILEGFGAGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|327483196|gb|AEA77603.1| Uroporphyrinogen III decarboxylase [Vibrio cholerae LMA3894-4]
Length = 343
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 182/333 (54%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+RR+ DAAILFSDIL I
Sbjct: 10 PVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVTLQPLRRFPLDAAILFSDILTI 69
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DA+G +RF EGP + PI + +I + +P + L Y + ++ +RK L
Sbjct: 70 PDAMGLGLRFAAGEGPVFERPIICKADVDKIGIPDPEGE--LQY---VMNAVRQIRKDLQ 124
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G+PWT+A+YM+ GG K + + Y + LLD L+D YL AQ
Sbjct: 125 GEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHALLDKLADSVISYLNAQ 184
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYML 253
I AG + +FDT G L +++ ++ + + +I+ + R+ + F K G L
Sbjct: 185 IKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEGRRVPVTLFTKNGGMWL 244
Query: 254 KNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ T +A+GLDW++ ++ A + + +QGN+DP L + + V +IL
Sbjct: 245 EQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYAPAPRIREEVASILAGF 303
Query: 313 GSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G G +FNLGHGI V P+N V+ V
Sbjct: 304 GQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 336
>gi|146309877|ref|YP_001174951.1| uroporphyrinogen decarboxylase [Enterobacter sp. 638]
gi|167012314|sp|A4W5C0|DCUP_ENT38 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145316753|gb|ABP58900.1| uroporphyrinogen decarboxylase [Enterobacter sp. 638]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADIDKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +II + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIIDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDTVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAQPARIEEEVASILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|261493977|ref|ZP_05990485.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494739|ref|ZP_05991218.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309556|gb|EEY10780.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310409|gb|EEY11604.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 191/349 (54%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLN-PNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ P+ + ++ L P+ +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVASLNDVNQLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPHI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + +FDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHEDYKAFSLHYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRIGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G+G +FNLGHGI P PK +D +
Sbjct: 297 LYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVPVESPKVFVDAI 345
>gi|15842216|ref|NP_337253.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CDC1551]
gi|308371095|ref|ZP_07667089.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu003]
gi|308373472|ref|ZP_07432466.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu005]
gi|308374660|ref|ZP_07436885.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu006]
gi|308375513|ref|ZP_07444188.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu007]
gi|308377092|ref|ZP_07668428.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu008]
gi|13882505|gb|AAK47067.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CDC1551]
gi|308329841|gb|EFP18692.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu003]
gi|308337499|gb|EFP26350.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu005]
gi|308341172|gb|EFP30023.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu006]
gi|308346115|gb|EFP34966.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu007]
gi|308348927|gb|EFP37778.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu008]
Length = 372
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 185/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 40 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 98
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 99 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 154
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 155 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 214
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 215 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 274
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 275 TAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDG 334
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 335 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 371
>gi|84622798|ref|YP_450170.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|123522834|sp|Q2P6D1|DCUP_XANOM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84366738|dbj|BAE67896.1| Uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 195/353 (55%), Gaps = 20/353 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGVYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V LD G +FNLGHG++P ++P++V LV+ V+
Sbjct: 297 GSPEAIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|238918147|ref|YP_002931661.1| uroporphyrinogen decarboxylase, [Edwardsiella ictaluri 93-146]
gi|259645148|sp|C5BHE8|DCUP_EDWI9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238867715|gb|ACR67426.1| uroporphyrinogen decarboxylase, putative [Edwardsiella ictaluri
93-146]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 181/349 (51%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY R + NF+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYNATRAQAGNFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLF 116
LQP+RR+ DAAILFSDIL + DA+G + F EGPR T + P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFETGEGPRFTHSVTCHADIQRLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + + + A
Sbjct: 121 LGY---VMDAVRTIRRSLRGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKVMFSDPAA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L ++ ++ R + +I+ ++R+
Sbjct: 178 LHLLLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLQRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 SEGRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTCDIADARRRVGGRVALQGNMDPSL 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL G G I NLGHGI P V PK+ V V
Sbjct: 297 LYAPPARIEQEVETILAGFGQGEGHICNLGHGIHPDVPPKHAGVFVDAV 345
>gi|218551019|ref|YP_002384810.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ATCC 35469]
gi|226723874|sp|B7LUK5|DCUP_ESCF3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218358560|emb|CAQ91208.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ATCC 35469]
Length = 354
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 185/345 (53%), Gaps = 11/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ G K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGSSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|149278616|ref|ZP_01884752.1| probable uroporphyrinogen decarboxylase [Pedobacter sp. BAL39]
gi|149230611|gb|EDM35994.1| probable uroporphyrinogen decarboxylase [Pedobacter sp. BAL39]
Length = 340
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 197/332 (59%), Gaps = 15/332 (4%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+ DAAILFSDILV
Sbjct: 17 PPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPVDLLGIDAAILFSDILV 75
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+A+G ++ F + GP+ +P+ T++ + N N+D+ L+ L + +I +++++L I
Sbjct: 76 TGEAMGGDLSFTQGVGPKFANPVRTEK-DVDNLNVDV-LDKLQYVADAIKVIQQRLNGSI 133
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+TV SY++ GG KD ++ + + LL ++ V+A+YL QI A
Sbjct: 134 PLIGFAGAPFTVMSYLVEGGSSKDFKLTKLLMHNQPEVAHRLLAKIAKVTADYLNLQIAA 193
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV+ IQIFD+ A L ++++ ++ R + II+ + RK + ISF KG+ +
Sbjct: 194 GVNAIQIFDSWALALSWNDYQEFSHRYIQEIIANLNRK--DIPVISFCKGSS-VFAPIMA 250
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP----VQGNLDPMRLVVGNQVMIDGVNAILDVL-G 313
+ + I +DW+ L L ++K P VQGNLDP L V+ + + + + G
Sbjct: 251 EANPDVISVDWNADL---LNIKKSLPAGIAVQGNLDPHILYADKPVIKKHILQLFERMRG 307
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
FIFNLGHGI P + +V ++ ++ K
Sbjct: 308 ENGFIFNLGHGIMPDIPFDHVKYAIEVIKDFK 339
>gi|194291162|ref|YP_002007069.1| uroporphyrinogen decarboxylase [Cupriavidus taiwanensis LMG 19424]
gi|193224997|emb|CAQ71008.1| uroporphyrinogen decarboxylase [Cupriavidus taiwanensis LMG 19424]
Length = 365
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 182/336 (54%), Gaps = 21/336 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKL---- 134
DA+G + F + EGPR P+ T+ +++ L L Y +F ++S +R+ L
Sbjct: 84 PDAMGLGLSFAQGEGPRFAHPLRTEADVHKLAVPDMASLQY---VFDAVSEIRRALVQDG 140
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + YL A
Sbjct: 141 RQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILEINAQAVTAYLNA 200
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYM 252
QI AG + IFDT G L + ++ ++ + R+++ ++R++ + I F KG G
Sbjct: 201 QIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHAGQQVPAIVFTKGGGLW 260
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMIDGVNAIL 309
L+ T ++AIGLDW+V L+ A ++ G +QGN+DP L + V +L
Sbjct: 261 LEALAD-TGADAIGLDWTVNLAEA--RRRTGGRVALQGNIDPTVLFAPEAAIRAQVRGVL 317
Query: 310 DVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
D GS +FNLGHGI+ P+ V LV V
Sbjct: 318 DSYAAGGGSDGHVFNLGHGISQFTPPEAVSVLVDEV 353
>gi|195056259|ref|XP_001995029.1| GH22930 [Drosophila grimshawi]
gi|193899235|gb|EDV98101.1| GH22930 [Drosophila grimshawi]
Length = 356
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T ++ L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPDDLKRLTP--DGALSRLT 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L
Sbjct: 128 YVGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTDYPEDTKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ ++DV +YL Q+ AG ++QIF++ A L + EF ++ + RI + + ++
Sbjct: 188 NLITDVIVDYLEMQVMAGAQMLQIFESSAEHLSKEEFLVWSTPYLRRIRNDLVERLTKKA 247
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + I LD++V P+ ++ +QGNLDP +
Sbjct: 248 VPLVPLTIFAKGAGHSLKEQSEL-GYDVISLDYTVDPVEARAQVGPNITLQGNLDPQDMY 306
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ ++ G +I NLGHGITPQ ++ LV V
Sbjct: 307 REPGELRTLTTEMVHKFGKSRYIANLGHGITPQTPIVSMETLVDAV 352
>gi|21243740|ref|NP_643322.1| uroporphyrinogen decarboxylase [Xanthomonas axonopodis pv. citri
str. 306]
gi|23813978|sp|Q8PI85|DCUP_XANAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21109326|gb|AAM37858.1| uroporphyrinogen decarboxylase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 354
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 196/354 (55%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L+ ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LNTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V LD G +FNLGHG++P ++P++V LV+ V++
Sbjct: 297 GSPEAIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQT 350
>gi|78048719|ref|YP_364894.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123743863|sp|Q3BQR9|DCUP_XANC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78037149|emb|CAJ24894.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 354
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 195/354 (55%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 297 GSPDAIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQS 350
>gi|322515117|ref|ZP_08068122.1| uroporphyrinogen decarboxylase [Actinobacillus ureae ATCC 25976]
gi|322118882|gb|EFX91069.1| uroporphyrinogen decarboxylase [Actinobacillus ureae ATCC 25976]
Length = 354
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 187/345 (54%), Gaps = 14/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYL EY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLSEYKATRAEAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN---PNIDLFLNYL 120
RRY DAAILFSDIL I DA+G + F EGP+ + + N P+ + L Y
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIENKARVENLPIPDPEGELQY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+D YL AQI +G + +FDT G L +E++ ++ + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIKSGAQAVMVFDTWGGVLAHNEYKEFSLCYMHKIVDGLIRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
K F KG G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTIDIADARRRVGHKVALQGNMDPSVLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ + V IL G G +FNLGHGI P+ PK +D V
Sbjct: 301 PERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKIFVDAV 345
>gi|332285683|ref|YP_004417594.1| uroporphyrinogen decarboxylase [Pusillimonas sp. T7-7]
gi|330429636|gb|AEC20970.1| uroporphyrinogen decarboxylase [Pusillimonas sp. T7-7]
Length = 358
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 183/332 (55%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRYLPEY + R + +FL + EY E+TLQP++R++ DAAILFSDIL I
Sbjct: 26 PIWLMRQAGRYLPEYNETRARAGSFLALAQNREYACEVTLQPLQRFDLDAAILFSDILTI 85
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F+ EGP+ PI ++ L P+ ++ L +F ++S++RK+L
Sbjct: 86 PHAMGLGLDFLAGEGPKFAHPIRHEDDVKKLTVPD----MSRLQYVFDAVSLIRKELDGK 141
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWTV YM+ G D+ + Y + +L+ + + +YL AQI
Sbjct: 142 VPLIGFAGSPWTVGCYMVEGQGSSDYRLIKTMLYSRPDLLHRILEVNAQATQQYLNAQIQ 201
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKN 255
AG + IFD+ G L + F+ ++ +++ + R++ I F KG +++
Sbjct: 202 AGAQAVMIFDSWGGVLADDMFQEFSLAYTRKVVQGLVREHEGRPVPVIVFTKGGAQWIED 261
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD---V 311
+ +A+GLDW+ LS + + +QGN+DPM L G+ + + ++D
Sbjct: 262 IAAV-GCDAVGLDWTANLSQVRQRVGDAVALQGNIDPMVLFGGDAAIRNQARKVIDDFGP 320
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G G +FNLGHGI+ P V LV V +
Sbjct: 321 VGQGGHVFNLGHGISRFTPPAAVSTLVDEVHT 352
>gi|309780439|ref|ZP_07675189.1| uroporphyrinogen decarboxylase [Ralstonia sp. 5_7_47FAA]
gi|308920832|gb|EFP66479.1| uroporphyrinogen decarboxylase [Ralstonia sp. 5_7_47FAA]
Length = 367
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 190/350 (54%), Gaps = 21/350 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY
Sbjct: 11 LRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL + DA+G + F + EGPR P+ T+ ++ L+ P+ ++ L +F
Sbjct: 71 DAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD----MSSLQYVFD 126
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ +R+ L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 127 AVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRIL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + +YL AQI AG +Q+FDT G L + ++ ++ + R+++ +R +
Sbjct: 187 EINAQAVIDYLNAQIDAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVNGIRAGADGQR 246
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVG 297
I F KG G L+ T ++A+G+DW+V L A + + G V QGNLDP L
Sbjct: 247 VPVILFTKGGGLWLEAMAE-TGADALGVDWTVNLQLARQ-RTAGRVALQGNLDPTVLFAE 304
Query: 298 NQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 305 PEAIRAQVRRVLEDYAARGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHS 354
>gi|295095115|emb|CBK84205.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 354
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 187/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADVDKLPIPDPEGE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A
Sbjct: 121 LGY---VMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPLA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V+ IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAQPARIEEEVSTILSGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|166711165|ref|ZP_02242372.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 354
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 195/353 (55%), Gaps = 20/353 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--P 238
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGEGPE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ LD G +FNLGHG++P ++P++V LV+ V+
Sbjct: 297 GSPEAIRTEVSKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|159900063|ref|YP_001546310.1| uroporphyrinogen decarboxylase [Herpetosiphon aurantiacus ATCC
23779]
gi|159893102|gb|ABX06182.1| uroporphyrinogen decarboxylase [Herpetosiphon aurantiacus ATCC
23779]
Length = 340
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 186/341 (54%), Gaps = 16/341 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ P+W MRQAGR LPEYR IR+++ F+D+CY PE E+TLQP+R
Sbjct: 2 QDRFLRACRREAVDATPVWFMRQAGRALPEYRAIREQY-GFMDICYQPELCAEVTLQPVR 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNY 119
R DAAI+F+DI+ A G V VE+ GP + +PI T I + P +D+
Sbjct: 61 RLGVDAAIMFADIMTPLIATGVGVDLVESIGPVVANPIRTMADVSRIRPIEPEVDVPY-- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I +SI +L+ +L LIGF GAP+T+A+Y++ G K+ + Y + +N
Sbjct: 119 ---ISKSIHLLKAEL-GQTPLIGFAGAPFTLAAYLVEGKGSKNFLNTKALMYGSPNVWNA 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L+D++ YL +I AGVD +Q+FD+ GCL H++ + RI+ +R + N
Sbjct: 175 LMERLADLTISYLRVKIAAGVDALQLFDSWVGCLSPHDYATFVQPYTARILKTLREET-N 233
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
I F +L R + +G DW +P+ A EL + +QGNLDP L+
Sbjct: 234 IPLIHFGTNTTNLLPLMRN-DGGSVLGADWRIPIDEAWELIGDDKAIQGNLDPAVLLGPW 292
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + + IL + P IFNLGHGI PQ N+ LV
Sbjct: 293 EYVREQAADILRRVNRRPGHIFNLGHGIHPQTPVANLERLV 333
>gi|330444945|ref|ZP_08308599.1| uroporphyrinogen decarboxylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493063|dbj|GAA03096.1| uroporphyrinogen decarboxylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 355
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 188/354 (53%), Gaps = 17/354 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDHTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNID 114
LQP++R+ DAAILFSDIL I DA+G + F EGP+ PI ++I L +P +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPIKCKADVEKIGLPDPEGE 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 --LQY---VMNAVRQIRHDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ +
Sbjct: 176 QTLHLLLDKLADSVIEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLI 235
Query: 235 RKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP 291
R+ + F K G L+ T + +GLDW++ ++ A + + +QGN+DP
Sbjct: 236 RENDGRRVPVTLFTKNGGMWLEQI-AATGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDP 294
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +IL+ G +FNLGHGI V P+N V V
Sbjct: 295 SILYAQPERIRQEVASILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHE 348
>gi|322381023|ref|ZP_08055059.1| uroporphyrinogen decarboxylase [Helicobacter suis HS5]
gi|321146545|gb|EFX41409.1| uroporphyrinogen decarboxylase [Helicobacter suis HS5]
Length = 339
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 179/328 (54%), Gaps = 11/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++IRK+ KNFLD+C + +TLQP+ + DAAILFSDIL++
Sbjct: 16 PIWMMRQAGRYLSEYQEIRKQAKNFLDLCANVDLASTITLQPVEILDVDAAILFSDILIL 75
Query: 81 ADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + FV GP+ + ++I +L+ L ++ ++S +R KL
Sbjct: 76 PHTMGLPLEFVPGFGPKFLRGIESLEDIQVLHTA----YQKLEFVYDTLSSVRAKLEPSK 131
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAPWT+A+YMI K + +++ Y + + + LLD LS YL QI A
Sbjct: 132 ALIGFSGAPWTLATYMIESQGSKTYHKSKKLLYTDPKLLHTLLDMLSTEIIGYLSMQIKA 191
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D I +FD+ A L + + + +I ++ + I F KG L++
Sbjct: 192 GADAIMLFDSWANALECKAYLEFGWSYIQKITHTLKTMHKTIPIIVFPKGISGYLEHLN- 250
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
D + G DWS PL A L +QGNL+P RL + M++GV IL+V+G P
Sbjct: 251 -GDFDVFGCDWSTPLELAKRILGHRYVLQGNLEPARL-YNQEAMLEGVMHILEVMGKNPG 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
FIFNLGHG+ + ++LV+ V +
Sbjct: 309 FIFNLGHGMLADLPCTIAIELVRLVHEK 336
>gi|296100628|ref|YP_003610774.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055087|gb|ADF59825.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 354
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 184/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI---YLLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSTIKSKADVDKLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPLA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAQPARIEEEVASILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|89889926|ref|ZP_01201437.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium BBFL7]
gi|89518199|gb|EAS20855.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium BBFL7]
Length = 339
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 191/339 (56%), Gaps = 12/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G ++ PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T+ PI++
Sbjct: 8 LRALKGETVDRPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCQTPELATEITVMPIKQIGT 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI A+ +V GP + +PI T E ++ P++ L+Y++ +
Sbjct: 67 DAAILFSDILVIPQAMNIDVEMKNGVGPWLPNPIRTAEDLNRVVVPDVADSLSYVM---E 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +++L + + LIGF G+PWT+ Y + G K+ + + F + A + LL ++
Sbjct: 124 AIDLTKQELNDEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPEAAHELLQRIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ GV+ +Q+FD+ G L +++ ++ + + +I+ A++ P+ + I F
Sbjct: 184 DTTIAYLKLKVKHGVNAVQVFDSWGGMLSPVDYQEFSWKYIQQIVDALK---PHTEVIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + + + A+G+DW+ A L +QGN DP RL +
Sbjct: 241 GKGCWFALGDMAK-SGAAALGVDWTCSARNARYLSGGNITLQGNFDPSRLFSPPATIKKM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++D G F+ NLGHGI P + N V V+
Sbjct: 300 VKQMIDEFGKDKFVANLGHGILPNIPVPNAQAFVDAVKE 338
>gi|187930563|ref|YP_001901050.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12J]
gi|238058106|sp|B2UGT5|DCUP_RALPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187727453|gb|ACD28618.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12J]
Length = 367
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 188/350 (53%), Gaps = 21/350 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY
Sbjct: 11 LRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYAL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL + DA+G + F + EGPR P+ T+ ++ L+ P+ ++ L +F
Sbjct: 71 DAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD----MSSLQYVFD 126
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ +R+ L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 127 AVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRIL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + +YL AQI AG +Q+FDT G L + ++ ++ + R++ +R +
Sbjct: 187 EINAQAVIDYLNAQIDAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVEGIRAGADGQR 246
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVG 297
I F KG G L+ T ++A+G+DW+V L A + + G V QGNLDP L
Sbjct: 247 VPVILFTKGGGLWLEAMAE-TGADALGVDWTVNLQLARQ-RTAGRVALQGNLDPTVLFAE 304
Query: 298 NQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 305 PDAIRAQVRRVLEDYAAGGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHS 354
>gi|326335018|ref|ZP_08201218.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692823|gb|EGD34762.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 341
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 189/341 (55%), Gaps = 13/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+G + PP+W+MRQAGRYLP++R +R K+ +F C TPE E+T QP+
Sbjct: 8 LRALKGEITERPPVWMMRQAGRYLPQFRALRDKY-DFFTRCRTPELVAEITTQPVEIVGV 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+G + E GP + PI + ++I + P+I L Y+L Q
Sbjct: 67 DAAILFSDILVVPQAMGIEIEMKEQVGPFLPSPIRSAKDIEKVQIPDISHSLGYVL---Q 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I + +++L + + LIGF GAPWT+ Y++ G K + F + N + + LL ++
Sbjct: 124 GIHLTKERLMDEVPLIGFAGAPWTIFCYIVEGKGSKTFDIAKSFCFSNPKLAHSLLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + YL ++ AG D +Q+FD+ G L ++++++ + +I+ A+ P I F
Sbjct: 184 NTTILYLKEKVKAGADALQLFDSWGGVLSPEDYQDFSWQYTLQILEALS---PTPTII-F 239
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDG 304
AKG + L+ + + ++A+G+DW+ A L V QGNLDP L+ + +
Sbjct: 240 AKGCWFALEQMSK-SCASALGVDWTCNPQIARRLTGGKKVLQGNLDPAWLLASPEQIRQK 298
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ G +I NLGHGI P V +N V+ V+ K
Sbjct: 299 THRMIQAFGKDHYIANLGHGILPNVPVENARAFVEAVKCFK 339
>gi|88854543|ref|ZP_01129210.1| uroporphyrinogen decarboxylase [marine actinobacterium PHSC20C1]
gi|88816351|gb|EAR26206.1| uroporphyrinogen decarboxylase [marine actinobacterium PHSC20C1]
Length = 352
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 189/341 (55%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I+ +G+ P+W MRQAGR LPEYR++R+ L+ C TPE E+TLQP+RR+
Sbjct: 19 IIRAYRGDRPETTPVWFMRQAGRSLPEYRKLREG-NEMLEACLTPELASEITLQPVRRHK 77
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI++ A G V V GP +PI T +++ L P ID PI +
Sbjct: 78 VDAAIFFSDIVIPAKLAGVEVEIVPGRGPVFANPIRTAEDVAKLRP-IDP--AAFAPIRE 134
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ +L N LIGF GAP+T+ASYM+ GG KD + R Y + + + LL++ +
Sbjct: 135 AVAQTVAQLGN-TPLIGFAGAPFTLASYMVEGGPSKDQQRARTLMYSDPQTWANLLNWCA 193
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ E+LIAQ+ AG +Q+FD+ G L E ++ A R S + R Y K + F
Sbjct: 194 DIAGEFLIAQVEAGASAVQLFDSWVGSLSEQQYVRRVAPHSKRAFSHL-RGYDVPK-VHF 251
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G+G +L+ + ++ +G+DW +PL A G P+QGN+DP L V+
Sbjct: 252 GVGSGEVLQAMHGI-GADVMGVDWRIPLDEADRRLGGGIPLQGNIDPALLGAPWHVLEAH 310
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V +++ P + NLGHG+ P+ DP + +V+ V E
Sbjct: 311 VRDVMNRGRVAPAHVVNLGHGVGPETDPDVLTKIVELVHQE 351
>gi|322378458|ref|ZP_08052910.1| uroporphyrinogen decarboxylase [Helicobacter suis HS1]
gi|321149102|gb|EFX43550.1| uroporphyrinogen decarboxylase [Helicobacter suis HS1]
Length = 339
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 179/328 (54%), Gaps = 11/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EY++IRK+ KNFLD+C + +TLQP+ + DAAILFSDIL++
Sbjct: 16 PIWMMRQAGRYLSEYQEIRKQAKNFLDLCANVDLASTITLQPVEILDVDAAILFSDILIL 75
Query: 81 ADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + FV GP+ + ++I +L+ L ++ ++S +R KL
Sbjct: 76 PHTMGLPLEFVPGFGPKFLRGIESLEDIQVLHTA----YQKLEFVYDTLSSVRAKLEPSK 131
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAPWT+A+YMI K + +++ Y + + + LLD LS YL QI A
Sbjct: 132 ALIGFSGAPWTLATYMIESQGSKTYHKSKKLLYTDPKLLHTLLDMLSTEIIGYLSMQIKA 191
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D I +FD+ A L + + + +I ++ + I F KG L++
Sbjct: 192 GADAIMLFDSWANALECKAYLEFGWSYIQKITHTLKTMHKTIPIIVFPKGISGYLEHLN- 250
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
D + G DWS PL A L +QGNL+P RL + M++GV IL+V+G P
Sbjct: 251 -GDFDVFGCDWSTPLELAKRILGHRYVLQGNLEPARL-YNQEAMLEGVMHILEVMGKNPG 308
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
FIFNLGHG+ + ++LV+ V +
Sbjct: 309 FIFNLGHGMLADLPRTIAIELVRLVHEK 336
>gi|325925433|ref|ZP_08186829.1| uroporphyrinogen decarboxylase [Xanthomonas perforans 91-118]
gi|325544161|gb|EGD15548.1| uroporphyrinogen decarboxylase [Xanthomonas perforans 91-118]
Length = 354
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 194/354 (54%), Gaps = 20/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V LD G +FNLGHG++P ++P++V LV V+S
Sbjct: 297 GSPDAIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVDAVQS 350
>gi|312170810|emb|CBX79071.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC BAA-2158]
Length = 356
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 184/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPEQE 121
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 122 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQT 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 179 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLRE 238
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW ++ A + +QGN+DP
Sbjct: 239 NDGRRVPVTLFTKGGGQWLEAM-ATTGCDALGLDWITDMADARRRVGDRVALQGNMDPSM 297
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 298 LYASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 346
>gi|158300799|ref|XP_320631.3| AGAP011895-PA [Anopheles gambiae str. PEST]
gi|157013335|gb|EAA00166.4| AGAP011895-PA [Anopheles gambiae str. PEST]
Length = 419
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 74 KNDNLLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRAKH-DFFTVCRTPELACEVTMQPL 132
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L N + L +
Sbjct: 133 RRFDLDASIIFSDILVIPQALGITVEMKPGVGPVLPEPLVGPADLDRLNQTGTIERLKYV 192
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I+++R+ L + L GF GAPWT+ YMI GG K + + + + A LLD
Sbjct: 193 GEAITMMRRMLEGKVPLFGFTGAPWTLMGYMIEGGGSKTMSKAKGWLADHPEASQKLLDI 252
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----P 238
L+D +YL+ Q+ AG ++Q+F++ A L + +F + + + RI + RK P
Sbjct: 253 LTDQVVDYLVMQVKAGAQMLQVFESSADHLSKEQFLSVSLPCLKRIRVDLLRKLADEGVP 312
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLV 295
+ FAKGA + L+ + T +GLDW++ A ++ GP +QGNLDP +
Sbjct: 313 AVPMVLFAKGAMHSLEEMAQ-TGYEVLGLDWTIDPEEA--RKRVGPNVTLQGNLDPQDMY 369
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 370 KPPEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMSVLVQAV 415
>gi|291234861|ref|XP_002737366.1| PREDICTED: updo-like [Saccoglossus kowalevskii]
Length = 320
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 177/344 (51%), Gaps = 51/344 (14%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G P+W+MRQAGRYLPE++++R + F +C TP E+TLQPI+R++
Sbjct: 18 ILRAARGEKTEKTPVWVMRQAGRYLPEFKEMRAE-NEFFHVCQTPSLACEVTLQPIKRFD 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLNPNIDL--FLNYLLPI 123
DAAI+FSDILVI ALG V+ + +GP D PIT ++ L N+D+ L Y +
Sbjct: 77 LDAAIIFSDILVIPQALGLEVQMIPGKGPTFDDPITKVSDLGRLKKNVDVNESLGY---V 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++IS+ R KL + LIGF G+PWT+ SY I GG ++ + YQN A + L
Sbjct: 134 FEAISLTRHKLEGKVPLIGFAGSPWTLMSYSIEGGGSTTFSSSKAWLYQNVDASHQFLQL 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++DV+ ++L+ Q+ AG +I
Sbjct: 194 ITDVTVDFLVGQVLAGAQII---------------------------------------- 213
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
FAKGA Y L + ++ + + +DW+V P E+ +QGNLDP + + +
Sbjct: 214 -FAKGAHYALSELSQ-SNYDVVSIDWTVKPKCARQEVADRVSLQGNLDPCAIHSSKEEIS 271
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V ++ G+ +I NLGHGI P DP++V V V +
Sbjct: 272 NSVKKMISEFGTQKYIANLGHGIYPTADPEHVEAFVNAVHKHSL 315
>gi|302414112|ref|XP_003004888.1| uroporphyrinogen decarboxylase [Verticillium albo-atrum VaMs.102]
gi|261355957|gb|EEY18385.1| uroporphyrinogen decarboxylase [Verticillium albo-atrum VaMs.102]
Length = 366
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 185/347 (53%), Gaps = 26/347 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V+ PP W+MRQAGRYLPEY + K +F C +PE LTLQPI R++
Sbjct: 13 LLRAARGEVVERPPCWIMRQAGRYLPEYHEA-KGTNDFFACCRSPEIASTLTLQPIDRFD 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-- 122
DAAI+FSDILVI ALG V V+ +GP P+T E +P + LP
Sbjct: 72 GLLDAAIIFSDILVIPQALGMTVEMVDKKGPHFPSPLTGPE----DPQYASVMAVDLPTA 127
Query: 123 ------IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+++ A
Sbjct: 128 AAELDYVYKAITMTRHKLAGRVPLIGFCGAPWTLLCYMVEGGGTKLFIQSKKWVYRHADA 187
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++D+ EYL Q+ AG + +FD+ AG LG EF +++ + I + + K
Sbjct: 188 ARALLQKIADLCVEYLALQVQAGAQAVMVFDSWAGELGPREFASFSEPYLAHIAAHLPAK 247
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNL 289
+ F KGA + L L +A+G+DW + A+ ++ + V QGN
Sbjct: 248 LRSLGLDPVPMTVFPKGAWHALGRACDL-GYDAVGIDWMQDPAEAVRIRGDRRVALQGNA 306
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
DP L + M ++D +I NLGHGITP V+P ++
Sbjct: 307 DPGVLYGTKEEMTRAAQVMVDGFWKEKKGWICNLGHGITPGVNPDDL 353
>gi|297539924|ref|YP_003675693.1| uroporphyrinogen decarboxylase [Methylotenera sp. 301]
gi|297259271|gb|ADI31116.1| uroporphyrinogen decarboxylase [Methylotenera sp. 301]
Length = 354
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 193/351 (54%), Gaps = 14/351 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K L+ L + P+W+MRQAGRYLPEYR+ RK +FL +C +P++ E+T
Sbjct: 1 MSELKNDTFLKALMRQPTDYTPVWMMRQAGRYLPEYRESRKTAGSFLQLCKSPDFATEVT 60
Query: 60 LQPIRRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
+QP+ RY DA+ILFSDIL + DA+G + F E EGP+ + +E + + +
Sbjct: 61 IQPLDRYPLLDASILFSDILTVPDAMGLGLYFEEGEGPKFERTLREEADIQKLEVP-DMA 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F +++ +RK L + LIGF G+PWT+A+YM+ G D + AY +
Sbjct: 120 KLQYVFDAVAQIRKTLDGRVPLIGFTGSPWTLATYMVEGKGGTDFLTIKKMAYARPDLLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV----- 233
+L+ + +YL AQI AG + IFD+ G L + ++ + +I++ +
Sbjct: 180 HILETTAQTVIQYLNAQILAGAQAVMIFDSWGGALSHDAYIEFSLNYMKKIVAGLIKDND 239
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
RK P+ + F KG L+ + ++A+GLDW+V + A + + + +QGNLDP
Sbjct: 240 GRKVPS---VVFTKGGALWLEAQAEI-GADALGLDWTVDIGQARKRVGDKVALQGNLDPA 295
Query: 293 RLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L+ + + V +L G+G +FNLGHGIT P+N +++ VR
Sbjct: 296 ILLSTPEAIEKQVENVLRSYGNGHGHVFNLGHGITQWTPPENAAAMLEAVR 346
>gi|255037179|ref|YP_003087800.1| uroporphyrinogen decarboxylase [Dyadobacter fermentans DSM 18053]
gi|254949935|gb|ACT94635.1| uroporphyrinogen decarboxylase [Dyadobacter fermentans DSM 18053]
Length = 342
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 181/348 (52%), Gaps = 17/348 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + +L +G P+W+MRQAGR L EYR +R+K +F+ + TPE E+TL
Sbjct: 1 MNLKNDLLLRAARGEKTERTPVWMMRQAGRILAEYRAVREKAGSFIKLATTPEMAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT------QEIYLLNPNID 114
QP+ DAAI+FSDILVI +A+G +E GP P T Q++++ P D
Sbjct: 61 QPVDLLGVDAAIIFSDILVIPEAMGLPYEMIEQRGPVF-PSTVHSLADLQKLHIAEPETD 119
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L +I I ++ L + LIGF GAP+T+ YM G K + Y
Sbjct: 120 --LKYVL---DAIKITKEGLAGRVPLIGFAGAPFTIFCYMTEGKGSKTFSVAKKHLYAEP 174
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LL ++D + YL AQI AG D++Q+FD+ AG L ++ ++ + +I A+
Sbjct: 175 EFSHTLLQQITDSTIAYLKAQIAAGADIVQLFDSWAGILSPEQYRVFSLPYIKQICDAIT 234
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
FAKGA + K L+ S +GLDW++ +S + L +QGNLDP L
Sbjct: 235 ----EVPVTVFAKGAFFARKEIGELSCS-VVGLDWNMDISESRALVPNKTLQGNLDPCVL 289
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V ++D G+ +I NLGHG+ P DP V ++ V+
Sbjct: 290 YASYDQIRKEVKNMVDQFGTQRYIANLGHGVYPDTDPDKVRCFIEAVK 337
>gi|226311401|ref|YP_002771295.1| uroporphyrinogen decarboxylase [Brevibacillus brevis NBRC 100599]
gi|226094349|dbj|BAH42791.1| uroporphyrinogen decarboxylase [Brevibacillus brevis NBRC 100599]
Length = 345
Score = 202 bits (514), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 185/343 (53%), Gaps = 17/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGRY PEYR IR K +F +M Y PE E+T P+ +
Sbjct: 11 LKACRGEATEHVPVWYMRQAGRYQPEYRAIRAK-HSFFEMNYIPEVCAEVTRLPVEQLGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAILF+DI+ +G +V GP + +PI + + + L+P ++ I
Sbjct: 70 DAAILFADIMTPLKPIGVDVNIESGIGPVIANPIESLKDVERLLELDPE-----THVPYI 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+SI ILR++L + LIGF GAP+T+ASY+I GG K + + + F Y A+ L++
Sbjct: 125 LESIKILRQQL--SVPLIGFAGAPFTLASYLIEGGPSKHYHKTKAFMYTEPVAWQALMEK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D++ YL AQI AG +Q+FD+ G L + ++ Y + RI +A++ I
Sbjct: 183 LGDMTITYLKAQIKAGAQAVQVFDSWVGALNDEDYREYITPVMTRIFNALKDT--GVPTI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GAG++L ++ RL + +GLDW ++ A E+ +QGNLDP L+ + +
Sbjct: 241 YFGIGAGHLLMDWNRLP-VDVVGLDWRTSITTAREMGVTKTLQGNLDPTLLLAPWEKLEA 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD P FIFNLGHG+ P + + L K + K
Sbjct: 300 KAKEILDEGTKQPGFIFNLGHGVFPDAKVETLQQLTKFIHRYK 342
>gi|319791435|ref|YP_004153075.1| uroporphyrinogen decarboxylase [Variovorax paradoxus EPS]
gi|315593898|gb|ADU34964.1| uroporphyrinogen decarboxylase [Variovorax paradoxus EPS]
Length = 369
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 181/347 (52%), Gaps = 26/347 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R K +F+ + +Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 24 PVWLMRQAGRYLPEYVATRAKAGSFMGLATNTDYATEVTLQPLARYPLDAAILFSDILTV 83
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F EGPR P+ + L P+++ L Y +F +++ +RK L
Sbjct: 84 PDAMGLGLSFEAGEGPRFARPVRDEAGVAALEVPDMEK-LRY---VFSAVASIRKALDGR 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ G D+ + Y + +L +D A YL AQI
Sbjct: 140 VPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYGRPDLMHRVLAVNADSVATYLNAQID 199
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK---FISFAKGAGYMLK 254
AG + IFD+ G L + F+ ++ R+++A++R + + I F KG G L
Sbjct: 200 AGAQAVMIFDSWGGVLADGAFQEFSLAYTARVLAALKRTGADGQPVPRIVFTKGGGLWLD 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG------PVQGNLDPMRLVVGNQVMIDGVNAI 308
R L D +G+DW+V L+ A EG +QGN+DP L + V +
Sbjct: 260 AMRAL-DCEVLGVDWTVNLATARLQIAEGSDGKAKALQGNIDPNVLFAPPAQIEAEVAKV 318
Query: 309 LDVLGS--------GP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
L G GP IFNLGHGI+ P +V LV+ V ++
Sbjct: 319 LRAFGKPHADRNAPGPTHIFNLGHGISQFTPPDHVAALVEAVHTQSC 365
>gi|312882830|ref|ZP_07742563.1| uroporphyrinogen decarboxylase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369522|gb|EFP97041.1| uroporphyrinogen decarboxylase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 354
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 192/349 (55%), Gaps = 15/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLRALMRQPVDHTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAQLASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PI + I + +P ++ L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPIKNKADIERIGIPDPEVE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y++ ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 123 YVM---NAVRQIRKDLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQLLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ EYL AQI AG + IFDT G L ++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLANSVIEYLNAQIKAGAQSVMIFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREND 239
Query: 239 NAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
+ F K G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGMWLEQI-AATGCDAVGLDWTVNIADAKARIGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + V++IL+ G G +FNLGHGI V P+N V V
Sbjct: 299 ASPERIREEVSSILEGFGKGTGHVFNLGHGIHLDVPPENAGVFVNAVHE 347
>gi|241664753|ref|YP_002983113.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12D]
gi|240866780|gb|ACS64441.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12D]
Length = 367
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 189/350 (54%), Gaps = 21/350 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY
Sbjct: 11 LRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPL 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLN-PNIDLFLNYLLPIFQ 125
DAAILFSDIL + DA+G + F + EGPR P+ T+ ++ L+ P+ ++ L +F
Sbjct: 71 DAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD----MSSLQYVFD 126
Query: 126 SISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ +R+ L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 127 AVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRIL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + +YL AQI AG +Q+FDT G L + ++ ++ + R+++ +R +
Sbjct: 187 EINAQAVIDYLNAQIEAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVNGIRAGADGQR 246
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVG 297
I F KG G L+ T ++A+G+DW+V L A + + G V QGNLDP L
Sbjct: 247 VPVILFTKGGGLWLEAM-AATGADALGVDWTVNLQLARQ-RTAGRVALQGNLDPTVLFAE 304
Query: 298 NQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 305 PDAIRAQVRRVLEDYAAGGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHS 354
>gi|300857693|ref|YP_003782676.1| uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685147|gb|ADK28069.1| uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
FRC41]
gi|302205434|gb|ADL09776.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
C231]
gi|302329988|gb|ADL20182.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
1002]
gi|308275672|gb|ADO25571.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
I19]
Length = 371
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 180/346 (52%), Gaps = 21/346 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ +QG P+W MRQAGR LPEYR++R+ LD C+ PE E+TLQP+RR++
Sbjct: 32 ILDAIQGKTPTRRPVWFMRQAGRSLPEYRKVREGI-GMLDSCFMPELLAEITLQPVRRHD 90
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V A G V + GP MD + + + +L + + I
Sbjct: 91 VDAAILFSDIVVPLKAAGVKVEIIPGRGPVMDRAIQSRADV--DALPILEEDVLQVARGI 148
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
I+R +L TLIGF GAP+T+ASY++ GG K+H + + + + ++ L+ L
Sbjct: 149 EIIRDELTEQQTLIGFAGAPFTLASYLVEGGPSKNHEKTKSMMHGDPETWHALMQRLVPT 208
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+L QI AGV +Q FD+ AG L E ++ N+ +I+ V + I F
Sbjct: 209 IVRFLRTQIDAGVQAMQFFDSWAGFLTERDYRNHVLPYSTQILEEV----ADVPRIHFGV 264
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGP--VQGNLDPMRLVVGNQVM-- 301
G +L S +G+DW VPL A E + G +QGNLDP L G+ V+
Sbjct: 265 STGELLATMSE-AGSEVMGVDWRVPLDAAAERIHARSGAKVLQGNLDPALLFAGDDVLKA 323
Query: 302 ------IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
++ AI +G IFNLGHG+ P DP+ + V+ +
Sbjct: 324 EIERICMEADRAIAAGHATG-HIFNLGHGVLPHTDPEAITRAVELI 368
>gi|332667519|ref|YP_004450307.1| Uroporphyrinogen decarboxylase [Haliscomenobacter hydrossis DSM
1100]
gi|332336333|gb|AEE53434.1| Uroporphyrinogen decarboxylase [Haliscomenobacter hydrossis DSM
1100]
Length = 347
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 185/338 (54%), Gaps = 10/338 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L V +G + PPIWLMRQAGR LP+YR +R KF F + + P E T+QPI
Sbjct: 14 LRVAKGERSDRPPIWLMRQAGRVLPQYRALRSKFPGFREFLFEPAAAAEATIQPIDELGV 73
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +A+G VE GP T Q+I L + + + ++++
Sbjct: 74 DAAIIFSDILVVPEAMGLPYDMVEKRGPLFPKTIQTAQDIAQLQSG-EAAADNMEYVYEA 132
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ I +++L + LIGF GAPWT+ +YMI G K + + F Y+ + LL+ ++D
Sbjct: 133 LRITKRELKGRVPLIGFAGAPWTIFAYMIEGQGSKTFSKAKQFLYREPVLSHLLLERITD 192
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ YL +I G D+IQ+FD+ AG L +++ +A +G+I +A+ F+
Sbjct: 193 TTIAYLKRKIANGADLIQLFDSWAGILSPAQYKTFATHYIGKICAAIT----EVPITVFS 248
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGA + L++ L + IGLDW++ P + + +QGNLDP L ++ + G
Sbjct: 249 KGAWFALEDIAAL-NCQVIGLDWNITPAEARARVGENLVLQGNLDPCFLYADHKTIRAGA 307
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ G I NLGHG+ P ++ +V V TV++
Sbjct: 308 IQMMEDFGQ-KHIVNLGHGLYPDIELDSVRVFVDTVKA 344
>gi|213028213|ref|ZP_03342660.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 354
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAA SDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAATFSSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP
Sbjct: 238 NDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 345
>gi|258593765|emb|CBE70106.1| Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase [NC10
bacterium 'Dutch sediment']
Length = 646
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 13/314 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYL EYR+IR K +FL++C+ P+ E+T+ R DAAI+F DIL++
Sbjct: 323 PIWIMRQAGRYLQEYREIRGKL-SFLELCHRPDLAAEVTVTAAERLGVDAAIIFGDILLV 381
Query: 81 ADALGRNVRFVENEGPRMD-PITT-QEIYLLNP-NIDLFLNYLLPIFQSISILRKKLPNH 137
+ +G + F + +GP + PI ++ L P ++ L++L F+++ + R LP +
Sbjct: 382 VEPMGVGLEFTKGDGPVIHHPIRCGADLKRLQPVDVQGSLSFL---FEAVRLARAALPAN 438
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF GAP+T+ASY+I G + + Q + Y++ A++ L++ LSDV ++YL QI
Sbjct: 439 IPLIGFAGAPFTLASYLIEGRGSRQYQQIKTLMYRDPAAWHALMERLSDVVSDYLNGQIA 498
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AGV V+Q+FD+ GCL ++ + R A+ R P I F +L R
Sbjct: 499 AGVQVVQLFDSWVGCLSPDDYREFVLPHTKR---AIARLVPGVPVIHFGTDTTSLLPLIR 555
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
N IGLDW V L A L E VQGNLDP+ L + + IL+ P
Sbjct: 556 E-AGGNVIGLDWRVDLGEAWAGLGYEVGVQGNLDPVALFAEPDKIRRQADRILERAAKRP 614
Query: 317 -FIFNLGHGITPQV 329
IFNLGHGI PQ
Sbjct: 615 GHIFNLGHGILPQT 628
>gi|281202531|gb|EFA76733.1| uroporphyrinogen decarboxylase [Polysphondylium pallidum PN500]
Length = 368
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY- 66
IL V +G + P+W+MRQAGRYLPE++++R +F +C PE ++TLQPI R+
Sbjct: 14 ILRVCRGEKVERTPVWIMRQAGRYLPEFKEVRADV-DFFTVCRNPELACKVTLQPIDRFP 72
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIF 124
DAAI+FSDILVI A+G V+ + +GP DP+ E+ + +D+ L +F
Sbjct: 73 GLDAAIIFSDILVIPQAMGLEVQMIPGKGPHFPDPVREPSEMSRVKYPVDI-KKELQYVF 131
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN--RVFAYQNSRAFNWLLD 182
+I++ R++L + LIGF GAPWT+ SY I GG I G N +++ Y+ + L
Sbjct: 132 DAITLTRQRLEGRVPLIGFSGAPWTLLSYCIEGGGISGSGMNHAKLWLYKYKEESHRFLK 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YLI Q+ AG ++Q+FD+ +G L F+ Y + I V+ +P
Sbjct: 192 MLTDTVVGYLIGQVDAGAQLLQVFDSWSGDLSPDLFDEYCLPYLVDIAKRVKEVHPTIPM 251
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQV 300
I FAKG+ + L +L+ + +G+DW++ A E +QGN+DP + G +V
Sbjct: 252 ICFAKGSNFGLTKLAQLSQYDVLGIDWTIEPKVAREFVAGTNKVLQGNMDPAVMFAGQEV 311
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +++ G+ +I NLGHG+ P + + + + +V +
Sbjct: 312 IDREVERMINSFGTQRYIANLGHGMQPSMTIDSAANFISSVHN 354
>gi|294933075|ref|XP_002780585.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
gi|239890519|gb|EER12380.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
Length = 370
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 197/353 (55%), Gaps = 23/353 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ ++L +G ++ P+W+MRQAGRYLPE++++R + +F+ +C P+ E+T+QP
Sbjct: 26 KQNRLLRAARGEEVDEIPVWIMRQAGRYLPEFKELRAE-HDFVKVCQDPDLASEVTIQPY 84
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQE----IYLLNPNIDLFL 117
RR+N DA I+FSDIL I +G+++ V +GP + P + T E I L PN+ L
Sbjct: 85 RRFNKLDACIVFSDILTIPMLMGQHLEMVPGKGPVLSPKLETPEDIERILNLKPNVGEGL 144
Query: 118 NYLL-PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
Y+ IF ++S KL N +T+IGFCGAPW++ YM+ GG K + R + Y
Sbjct: 145 AYVYDAIFATVS----KLENQLTVIGFCGAPWSLFCYMVEGGGSKTWAKARTWLYSYPED 200
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
++ ++D+ EYL+ Q AG ++Q+FDT+ G + + + RI + V+R+
Sbjct: 201 AKRVMAAITDICIEYLVNQYDAGAKILQVFDTNGGEITPACYAQFCLEDFKRIPAEVKRQ 260
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
P+A I F K +++ DS +AI + W P A + +QGNLDP L
Sbjct: 261 RPDALVIGFPKD----VQDLTSFEDSAYDAISVSWRKPADEARRDLPDKVLQGNLDPAML 316
Query: 295 VVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPK---NVLDLVKTVR 342
V+ D V A ++ G G +I NLGHG+ P + P+ N +D +K+++
Sbjct: 317 YSSAAVVKDAVVANVNAFGGGHSKYIANLGHGMMPDMTPEMAGNFIDAIKSIK 369
>gi|82778827|ref|YP_405176.1| uroporphyrinogen decarboxylase [Shigella dysenteriae Sd197]
gi|309783953|ref|ZP_07678598.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1617]
gi|123561316|sp|Q32AH0|DCUP_SHIDS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81242975|gb|ABB63685.1| uroporphyrinogen decarboxylase [Shigella dysenteriae Sd197]
gi|308928324|gb|EFP73786.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1617]
Length = 354
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 180/333 (54%), Gaps = 11/333 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 65 RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + L
Sbjct: 124 --VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHAL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 182 LDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGR 241
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 242 RVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAP 300
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQV 329
+ + V IL G G +FNLGHGI V
Sbjct: 301 PARIEEEVATILAGFGHGEGHVFNLGHGIHQDV 333
>gi|291615775|ref|YP_003518517.1| HemE [Pantoea ananatis LMG 20103]
gi|291150805|gb|ADD75389.1| HemE [Pantoea ananatis LMG 20103]
gi|327396041|dbj|BAK13463.1| uroporphyrinogen decarboxylase heme [Pantoea ananatis AJ13355]
Length = 356
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 187/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RR+ DAAILFSDIL I DA+G + F EGP +PIT + L P+ +
Sbjct: 61 LQPLRRFKLDAAILFSDILTIPDAMGLGLYFETGEGPCFSNPITCRADVDRLPVPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + +FDT G L +++ ++ + +I+ +V +
Sbjct: 178 LHAMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGNDYREFSLYYMHKIVDSVLHE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F K G L+ T +A+GLDW++ +S A + + +QGN+DP
Sbjct: 238 NEGRRVPITLFTKNGGQWLEAIAE-TGCDALGLDWTIDISEARRRVGHKVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYAPPARIEQEVATILEGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAV 345
>gi|195153651|ref|XP_002017737.1| GL17145 [Drosophila persimilis]
gi|194113533|gb|EDW35576.1| GL17145 [Drosophila persimilis]
Length = 351
Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 188/346 (54%), Gaps = 17/346 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQH-DFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V GP + PI T E + L P D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKRLTP--DGALSRLT 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 128 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D I Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 188 NLLTDA-----IMQVKAGAQMLQVFESSAEHLTKEDFLIWAVPYLRRIRDELVDRLTKKA 242
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP +
Sbjct: 243 VPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMY 301
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 302 RDADELRALTTEMVHKFGKSRYIANLGHGITPQTPITSMDVLVEAV 347
>gi|58580865|ref|YP_199881.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188578158|ref|YP_001915087.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|75508283|sp|Q5H3H5|DCUP_XANOR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058176|sp|B2SKP7|DCUP_XANOP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58425459|gb|AAW74496.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188522610|gb|ACD60555.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 354
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 194/353 (54%), Gaps = 20/353 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYL 120
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ I+ L P+++ L Y
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAE 239
Query: 241 K--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
+ + F KG G + + + + A+G+DW++ L+ A Q+ G +QGNLDP L
Sbjct: 240 RTPLVLFGKGNGAYVADL-AASGAEAVGVDWTISLADA--AQRAGGRVALQGNLDPATLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V LD G + NLGHG++P ++P++V LV+ V+
Sbjct: 297 GSPEAIRTEVGKTLDSYAQGNGGSREGHVLNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|152980188|ref|YP_001355297.1| uroporphyrinogen decarboxylase [Janthinobacterium sp. Marseille]
gi|179308113|sp|A6T450|DCUP_JANMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151280265|gb|ABR88675.1| uroporphyrinogen decarboxylase [Janthinobacterium sp. Marseille]
Length = 360
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 178/333 (53%), Gaps = 15/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R + +FL + P++ E+TLQP+ RY DAAILFSDIL +
Sbjct: 26 PLWLMRQAGRYLPEYRATRARAGSFLGLAKNPDFATEVTLQPLDRYKLDAAILFSDILTV 85
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + F+E EGP+ + P+ ++ L P L L +F +++ +R +L
Sbjct: 86 PDAMGLGLYFIEGEGPKFERPLRDEKAVQALKVPE----LGSLQYVFDAVTQIRTELKGR 141
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D + Y + +L + A YL AQI
Sbjct: 142 VPLIGFTGSPWTLACYMVEGGGSDDFRTVKAMLYNRPDLMHHILQTNALTVAAYLNAQID 201
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FDT G L + ++ ++ + ++ V+ + + I F KG G LK
Sbjct: 202 AGAQAVMMFDTWGGALADGAYQQFSLHYMREVMKHVKTEKDGVRIPSIVFTKGGGLWLKE 261
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG- 313
+ ++A+GLDW+V L A ++ + +QGNLDP L + V +L+ G
Sbjct: 262 IAAV-GADAVGLDWTVNLGAARAKVGERVALQGNLDPSILFAQPDQIRAEVAKVLESFGK 320
Query: 314 ---SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI+ P+ V LV V
Sbjct: 321 HSAGSGHVFNLGHGISQFTPPEAVTVLVDAVHE 353
>gi|310766090|gb|ADP11040.1| uroporphyrinogen decarboxylase [Erwinia sp. Ejp617]
Length = 355
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 183/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 178 LHLMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWTTDMADARRRVGDRVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 LYASPARIEQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAV 345
>gi|325284659|ref|YP_004264122.1| Uroporphyrinogen decarboxylase [Deinococcus proteolyticus MRP]
gi|324316148|gb|ADY27262.1| Uroporphyrinogen decarboxylase [Deinococcus proteolyticus MRP]
Length = 402
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 191/339 (56%), Gaps = 13/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGRY+PEYR IR ++ L+ TPE E+TLQP+R ++
Sbjct: 64 LKAARGEKAAHTPLWFMRQAGRYMPEYRAIRAD-RSMLECIRTPELAAEITLQPVRAFDV 122
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILF+DIL +G ++ FV+ GPR+ +P+ +T+ + LL P + Y +
Sbjct: 123 DAAILFNDILTPLPVMGLDLDFVKGAGPRISNPLRSTRAVDLLGVPAARESMPY---TAE 179
Query: 126 SISILRKKL-PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I +L+ +L I LIGF GAP+T+ASY I GG +++ + Y A+ L+D L
Sbjct: 180 AIRLLKPELDARGIPLIGFVGAPFTLASYAIEGGGSRNYEYTKQMMYAEPAAWFRLMDKL 239
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ V A+YL QI AG +QIFD+ AG L ++++ + + R+I AV K I
Sbjct: 240 ATVQADYLGEQIKAGAAAVQIFDSWAGALSRYDYQTFVWPATQRLIEAV--KPYGVPVIY 297
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F G++L + R +++ +G+DW PL A +L K +QGNLDP+ L + +
Sbjct: 298 FGTDTGHLLGDIARY-ETDVVGVDWRTPLDTAWAQLNKGQAIQGNLDPLLLAAPWRELKH 356
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
V+ +LD P IFN+GHGI P NV + + V
Sbjct: 357 QVDRVLDEAAGRPGHIFNIGHGILPTTPMDNVRRVAEYV 395
>gi|294634216|ref|ZP_06712762.1| uroporphyrinogen decarboxylase [Edwardsiella tarda ATCC 23685]
gi|291092361|gb|EFE24922.1| uroporphyrinogen decarboxylase [Edwardsiella tarda ATCC 23685]
Length = 354
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYNATRAQAGDFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLF 116
LQP+RR+ DAAILFSDIL + DA+G + F EGPR PIT + L P+ +
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTRPITCRADIDRLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + Y + A
Sbjct: 121 LGY---VMAAVRTIRRNLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPAA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+ YL AQI AG + IFDT G L ++ ++ + + +I+ ++R+
Sbjct: 178 LHHLLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLQYMHQIVDGLQRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDW+ ++ A + +QGN+DP
Sbjct: 238 NEGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTCDIADARRRVGDRVALQGNMDPSM 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V IL G G +FNLGHGI V P+ V+ V
Sbjct: 297 LYAPAARIEQEVADILAGFGQGEGHVFNLGHGIHQDVPPEQAGIFVEAV 345
>gi|325102982|ref|YP_004272636.1| uroporphyrinogen decarboxylase [Pedobacter saltans DSM 12145]
gi|324971830|gb|ADY50814.1| uroporphyrinogen decarboxylase [Pedobacter saltans DSM 12145]
Length = 344
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 188/329 (57%), Gaps = 10/329 (3%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+ DAAILFSDILV
Sbjct: 18 PPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPVDLLGIDAAILFSDILV 76
Query: 80 IADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSI-SILRKKLPN 136
+A+G + F + GPR +P+ +++ L ++ L Y+ + I S L K
Sbjct: 77 TGEAMGGQLSFEQGVGPRFANPVQNLKDVEALEVDVLDRLQYVADAIRVIQSRLSKLGDQ 136
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
I LIGF GAP+TV SY++ GG KD + ++F + A + LL ++DV+ +YL QI
Sbjct: 137 QIPLIGFAGAPFTVMSYLVEGGSSKDFKKTKLFMFNQPEAAHKLLQKIADVTVDYLNMQI 196
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AGV+ +QIFD+ A L ++ ++ + + IIS + R P ISF KG+ +
Sbjct: 197 AAGVNAVQIFDSWALALSWDDYREFSHQYIQNIISRLNRTVP---VISFCKGSS-VFAPI 252
Query: 257 RRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
+ + +DW+ + + +L + VQGNLDP L V+ D + I++ + G
Sbjct: 253 MAEAKPDVVSVDWNADIRNIKSKLPQGIAVQGNLDPFVLYADKAVIKDRILRIIERMRGE 312
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
FIFNLGHGI P + NV V+ ++
Sbjct: 313 KGFIFNLGHGIMPDIPFDNVKYAVEVIKE 341
>gi|157114045|ref|XP_001657956.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877460|gb|EAT41685.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 356
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 193/348 (55%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F ++C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEQVDRVPVWVMRQAGRYLPEFQEVRAKH-DFFEVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V + GP + P+ T + L N ++ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGITVEMHKGVGPVLPQPLVTPD-DLERLNTTGSIDRLKY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R L + L GF GAPWT+ YMI GG K + + + A LL+
Sbjct: 129 VGDAITMMRHMLDGKVPLYGFTGAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D +YL+ Q+ AG ++Q+F++ A L + ++ N A + RI + +K+
Sbjct: 189 LLTDQIVDYLLMQVKAGAQILQVFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGV 248
Query: 243 IS-----FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRL 294
F+KGA + L + T + IGLDW++ A +L GP +QGNLDP +
Sbjct: 249 TPVPMTLFSKGAMHSLTEQAQ-TGYDVIGLDWTIDPEEARKLA--GPNVTLQGNLDPQDM 305
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 306 YKSPEELRELVLTMVRKFGKHRYIANLGHGITPQTPVESMSVLVQAVH 353
>gi|325672646|ref|ZP_08152342.1| uroporphyrinogen decarboxylase [Rhodococcus equi ATCC 33707]
gi|325556523|gb|EGD26189.1| uroporphyrinogen decarboxylase [Rhodococcus equi ATCC 33707]
Length = 355
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + P+W MRQAGR LPEYR+IR L+ C+ PE E+T+QP+RR+
Sbjct: 18 LLAAATGRPVKHRPVWFMRQAGRSLPEYREIRAGI-GMLESCFDPELVCEITMQPVRRHK 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +P+ T P L + + + Q+
Sbjct: 77 VDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPVRTVADVAALPR--LVPDEVGAVAQA 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL ++D
Sbjct: 135 VRLLTAEL-GETALIGFAGAPFTLASYLVEGGPSRNHERTKALMHADPKTWHALLGRITD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V+ +L AQ+HAGVD +Q+FD+ AG L E+ + R+ + V + I F
Sbjct: 194 VTIAFLQAQLHAGVDAVQLFDSWAGALSLAEYREFVLPHSERVFAEVESAH--VPRIHFG 251
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMID 303
G G +L ++ +G+DW +PL A ++ GP +QGNLDP L G +
Sbjct: 252 VGTGELLSAMGE-AGADVVGVDWRIPLDVA--ARRVGPGKALQGNLDPAVLFAGWDAVER 308
Query: 304 GVNAIL------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + D+V+ V S
Sbjct: 309 EVRRICREADAALAAGATGHIFNLGHGVLPDTDPAVLTDVVELVHS 354
>gi|330886190|gb|EGH20091.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori str.
301020]
Length = 322
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/318 (36%), Positives = 176/318 (55%), Gaps = 11/318 (3%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
LP+ R R +F+ +C P++ E+TLQP+ RY DAAILFSDIL I DA+G + F
Sbjct: 1 LPKSRASRASAGDFMSLCKNPQFACEVTLQPLDRYPLDAAILFSDILTIPDAMGLGLYFE 60
Query: 92 ENEGPRMDPI--TTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW 148
EGPR T +I L P+ L Y + ++S +R++L + LIGF G+PW
Sbjct: 61 TGEGPRFKKTVSTLADIEALPIPDAQKDLGY---VMDAVSTIRRELNGRVPLIGFAGSPW 117
Query: 149 TVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT 208
T+A+YM+ GG KD +++ Y N +A + LLD L+ YL QI AG +QIFD+
Sbjct: 118 TLATYMVEGGSSKDFRKSKAMLYDNPQAMHLLLDKLAQSVTSYLNGQILAGAQAVQIFDS 177
Query: 209 HAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIG 266
G L ++ ++ + +I++ + R++ K I F KG G L++ + ++ +G
Sbjct: 178 WGGSLSSAAYQEFSLAYMRKIVNGLIREHDGRKVPVIVFTKGGGLWLESIADI-GADTLG 236
Query: 267 LDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHG 324
LDW+ + A + + + +QGN+DP L + + V IL G+G +FNLGHG
Sbjct: 237 LDWTCDIGEARQRVGSKVSLQGNMDPTVLYARPEAIRQEVARILASYGTGTGHVFNLGHG 296
Query: 325 ITPQVDPKNVLDLVKTVR 342
ITP+VDP N + V
Sbjct: 297 ITPEVDPANAGAFINAVH 314
>gi|70990812|ref|XP_750255.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus Af293]
gi|66847887|gb|EAL88217.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus Af293]
gi|159130730|gb|EDP55843.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus A1163]
Length = 364
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 195/347 (56%), Gaps = 28/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LT+QP+ RY
Sbjct: 13 LLRAARGERVPRPPIWVMRQAGRYLPEYHEAKGN-RDFFECCRNPEIASTLTIQPVDRYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ + +++ N+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVNVKEELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++++ Y+ +
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKMWIYKYPKESQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ +G ++Q+FD+ AG + F+ ++ + R ISA K
Sbjct: 189 ALLQKIAEICVEYLALQVASGAQLVQVFDSWAGEMSPAAFKTFSLPYL-RYISANLPKRL 247
Query: 239 NAKFIS------FAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNL 289
+A + FAKGA Y L++ L +S N +GLDW + A+++ K +QGN
Sbjct: 248 DAMGLERVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAMQIAKGRVTIQGNA 304
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
DP L + + + V ++ G +I NLGHGITP V P ++
Sbjct: 305 DPGILYGSREAITEAVEVMVKGFQGGKQGWIANLGHGITPFVKPDDL 351
>gi|50311181|ref|XP_455614.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644750|emb|CAG98322.1| KLLA0F11770p [Kluyveromyces lactis]
gi|51997606|emb|CAD43074.1| uroporphyrinogen decarboxilase [Kluyveromyces lactis]
Length = 369
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 192/344 (55%), Gaps = 23/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + PP W+MRQAGRYLPEY ++ K ++F + C E E+T+QP+RRY
Sbjct: 19 MLRAALGEKVERPPCWIMRQAGRYLPEYHEV-KNGRDFFETCRDAEIASEITIQPVRRYA 77
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI- 123
DAAI+FSDILVI A+G V VE +GP +P+ T+E L +D +N L +
Sbjct: 78 GLLDAAIIFSDILVIPQAMGMKVEMVEGKGPHFPEPLRTEE--QLQKVLDYKVNVLDELE 135
Query: 124 --FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
F++I++ R KL + L+GFCGAPWT+ YM GG + + + ++ + + LL
Sbjct: 136 WAFKAITMTRTKLDGQVPLLGFCGAPWTLLVYMTEGGGSRLFRFAKQWLNESPESSHKLL 195
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
++DV+ E+L Q+ AG ++Q+F++ G LG +F+ ++ + +I V +
Sbjct: 196 QKITDVAVEFLCQQVVAGCQMLQVFESWGGELGSRDFDEFSLPYLKQIAERVPPRLKQLG 255
Query: 240 ----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEG-PVQGNLDPM 292
+ FAKG+ Y L +L DS NA+ LDWS + A+++ + +QGNLDP
Sbjct: 256 IEERVPMVVFAKGSWYALD---KLCDSGYNAVSLDWSWDPAEAVKINSDRVTLQGNLDPG 312
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ ++++ V ++ G G +I N GHG P +DP+ +
Sbjct: 313 VIYGSDEIITKRVTEMVHGFGGGKQHYIVNFGHGTHPFMDPEKI 356
>gi|34496577|ref|NP_900792.1| uroporphyrinogen decarboxylase [Chromobacterium violaceum ATCC
12472]
gi|34102431|gb|AAQ58797.1| uroporphyrinogen decarboxylase [Chromobacterium violaceum ATCC
12472]
Length = 331
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/324 (36%), Positives = 175/324 (54%), Gaps = 10/324 (3%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR R + +F+ +C +P+Y E+TLQP+ R+ DAAILFSDIL + DA
Sbjct: 1 MMRQAGRYLPEYRATRARAGSFMGLCTSPDYATEVTLQPLDRFPLDAAILFSDILTVPDA 60
Query: 84 LGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+G + F E EGP+ P+ + I L P L Y +F +++ +RK L + LI
Sbjct: 61 MGLGLYFAEGEGPKFQRPLRDEAAIRALAPADMGKLQY---VFDAVASIRKALDGRVPLI 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+P+T+A YM+ GG D + Y + +L+ + YL AQI AG
Sbjct: 118 GFSGSPFTLACYMVEGGGSDDFRHVKAMLYSRPELLHHILEANTQSVIAYLNAQIDAGAQ 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYRRL 259
+QIFDT G L + ++ + RI++ ++R+ + I F KG G L++ +
Sbjct: 178 AVQIFDTWGGALSHAAYREFSLAYMQRIVAGLKREADGRRVPVIVFTKGGGQWLEDIAAI 237
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
++ +GLDW+ + A + + +QGN DP L + V IL G G
Sbjct: 238 G-ADCVGLDWTTDIGQARARVGAKVALQGNFDPNALFAEPAAIEREVERILQSYGQGSGH 296
Query: 318 IFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHGI+ DP + LV+ V
Sbjct: 297 VFNLGHGISQFADPAHAGALVEAV 320
>gi|115388489|ref|XP_001211750.1| uroporphyrinogen decarboxylase [Aspergillus terreus NIH2624]
gi|114195834|gb|EAU37534.1| uroporphyrinogen decarboxylase [Aspergillus terreus NIH2624]
Length = 395
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 191/346 (55%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C +PE LT+QP+ RY
Sbjct: 45 LLRAARGEKVERPPIWVMRQAGRYLPEYHEA-KGGRDFFECCRSPEIASTLTIQPVERYA 103
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ + + + ++ L+
Sbjct: 104 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLKSPDDGQYERVMAKAVDVQAELD 163
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 164 Y---VYKAITLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWIYKYPKESQ 220
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + + +K
Sbjct: 221 ALLLKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPATFKAFSLPYLRHISANLPKKLK 280
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L++ L +S N +GLDW + A+ + +QGN D
Sbjct: 281 EMGLEPVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAMRVANGRVTIQGNAD 337
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + + V +++ G +I NLGHG+TP V P+++
Sbjct: 338 PGVLYGGRAAITEAVEIMVEGFKKGKQGWIANLGHGVTPFVKPEDL 383
>gi|85058116|ref|YP_453818.1| uroporphyrinogen decarboxylase [Sodalis glossinidius str.
'morsitans']
gi|123520305|sp|Q2NWR2|DCUP_SODGM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84778636|dbj|BAE73413.1| uroporphyrinogen decarboxylase [Sodalis glossinidius str.
'morsitans']
Length = 354
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 183/349 (52%), Gaps = 12/349 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLF 116
LQP+RR+ DA ILFSDIL + DA+G + F + EGPR PI + L P+ +
Sbjct: 61 LQPLRRFPLDATILFSDILTVPDAMGLGLWFEQGEGPRFARPIQHRRDVEQLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LGY---VMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPET 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL QI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVVLYLNGQIRAGAQAVMLFDTWGGALTGADYREFSMHYMHKIVDGLLRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
+ F KG G L+ T +A+GLDWS ++ A + + +QGN+DP
Sbjct: 238 QDGRRVPVTLFTKGGGQWLEAM-AATGCDALGLDWSTDIADARRRVGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
L + V ILD G G +FNLGHGI V P + V V
Sbjct: 297 LYGSPARIEREVATILDAFGPGEGHVFNLGHGIHQDVPPAHAGHFVAAV 345
>gi|134096533|ref|YP_001101608.1| uroporphyrinogen decarboxylase [Herminiimonas arsenicoxydans]
gi|172044177|sp|A4GAF0|DCUP_HERAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|133740436|emb|CAL63487.1| Uroporphyrinogen decarboxylase (URO-D) (UPD) [Herminiimonas
arsenicoxydans]
Length = 360
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 182/334 (54%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR R + +FL + P+Y E+TLQP+ RY+ DAAILFSDIL +
Sbjct: 26 PMWMMRQAGRYLPEYRATRTRAGSFLGLAKNPDYATEVTLQPLDRYDLDAAILFSDILTV 85
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
DA+G + FV+ EGP+ + P+ ++ L P +D L Y +F +++ +R +L
Sbjct: 86 PDAMGLGLYFVDGEGPKFERPLRDEKAVQALKVPELD-SLQY---VFDAVTQIRTELKGR 141
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF G+PWT+A YM+ GG D + Y + +L + A YL AQI
Sbjct: 142 VPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMLYNRPDLMHHILQTNAITVAAYLNAQID 201
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKN 255
AG + +FDT G L + ++ ++ + ++ V+ + + I F KG G L
Sbjct: 202 AGAQAVMMFDTWGGALADGIYQQFSLHYMREVMKHVKTEKEGVRIPSIVFTKGGGLWLNE 261
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL----- 309
+ ++A+GLDW+V L A ++ +QGNLDP L + + V +L
Sbjct: 262 IADV-GADAVGLDWTVNLGAARAQVGDRVALQGNLDPSILFAQPEQIRTEVEKVLMSFGK 320
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GSG +FNLGHGI+ P++V LV V
Sbjct: 321 HAPGSG-HVFNLGHGISQFTPPESVSVLVDAVHE 353
>gi|312139466|ref|YP_004006802.1| uroporphyrinogen decarboxylase heme [Rhodococcus equi 103S]
gi|311888805|emb|CBH48117.1| uroporphyrinogen decarboxylase HemE [Rhodococcus equi 103S]
Length = 355
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 19/346 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + P+W MRQAGR LPEYR+IR L+ C+ PE E+T+QP+RR+
Sbjct: 18 LLAAATGRPVKHRPVWFMRQAGRSLPEYREIRAGI-GMLESCFDPELVCEITMQPVRRHK 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +P+ T P L + + + Q+
Sbjct: 77 VDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPVRTVADVAALPR--LVPDEVGAVAQA 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL ++D
Sbjct: 135 VRLLTAEL-GETALIGFAGAPFTLASYLVEGGPSRNHERTKALMHADPKTWHALLGRITD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V+ +L AQ+HAGVD +Q+FD+ AG L E+ + R+ + V + I F
Sbjct: 194 VTIAFLQAQLHAGVDAVQLFDSWAGALSLAEYREFVLPHSERVFAEVESAH--VPRIHFG 251
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMID 303
G G +L ++ +G+DW +PL A ++ GP +QGNLDP L G +
Sbjct: 252 VGTGELLGAMGE-AGADVVGVDWRIPLDVA--ARRVGPGKALQGNLDPAVLFAGWDAVER 308
Query: 304 GVNAIL------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + D+V+ V S
Sbjct: 309 EVRRICREADAALAAGATGHIFNLGHGVLPDTDPAVLTDVVELVHS 354
>gi|167970099|ref|ZP_02552376.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
Length = 357
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 184/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 84 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---L 253
GVD IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 200 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAV 259
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-- 310
R +G+DW PL+ A G +Q NLDP ++ G + A++D
Sbjct: 260 TAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQDNLDPAVVLAGWPAVERAARAVVDDG 319
Query: 311 ----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 320 RRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 356
>gi|332977093|gb|EGK13897.1| uroporphyrinogen decarboxylase [Desmospora sp. 8437]
Length = 346
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 184/341 (53%), Gaps = 15/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGRY PEYR+IR++ F +M PE E+T P+ +
Sbjct: 11 LKACRGESVPYTPVWYMRQAGRYQPEYREIRQR-HTFFEMNEKPEVCAEVTRLPVEQLGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLNYLLPI 123
DAAILF+DI+ +G +V+ GP + P I LNP D+ +
Sbjct: 70 DAAILFADIMTPLKPVGVDVQIKSGVGPVISNPVRTPADVNRIGSLNPQRDVPF-----V 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+SI +L + + + LIGF GAP+T+ASY+I GG K++ Q + F Y A+ L++
Sbjct: 125 LESIHMLTSEQLD-VPLIGFAGAPFTLASYLIEGGPSKNYHQTKGFMYSQPEAWEALMEK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL AQI AG +Q+FD+ G L +++ Y A + RI S ++ + I
Sbjct: 184 LADLTVTYLTAQISAGAHAVQVFDSWVGALNAADYQTYVAPVMHRIFSRLKEST-DVPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GAG++L+ + RL + IGLDW + A +L E +QGNLDP L+ +++
Sbjct: 243 YFGIGAGHLLREWNRLP-VDVIGLDWRTSIREARQLGIEKSLQGNLDPSLLLAPWELIEK 301
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
ILD P IFNLGHG P++ + + L + +
Sbjct: 302 EAREILDQGMETPGHIFNLGHGTYPEIQVETLQRLTQFIHE 342
>gi|157114049|ref|XP_001657958.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877462|gb|EAT41687.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 417
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 193/348 (55%), Gaps = 14/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F ++C TPE E+T+QP+
Sbjct: 72 KNDNLLRAARGEQVDRVPVWVMRQAGRYLPEFQEVRAK-HDFFEVCRTPELACEVTMQPL 130
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V + GP + P+ T + L N ++ L
Sbjct: 131 RRFDLDASIIFSDILVIPQALGITVEMHKGVGPVLPQPLVTPD-DLERLNTTGSIDRLKY 189
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R L + L GF GAPWT+ YMI GG K + + + A LL+
Sbjct: 190 VGDAITMMRHMLDGKVPLYGFTGAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLN 249
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D +YL+ Q+ AG ++Q+F++ A L + ++ N A + RI + +K+
Sbjct: 250 LLTDQIVDYLLMQVKAGAQILQVFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGV 309
Query: 243 IS-----FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRL 294
F+KGA + L + T + IGLDW++ A +L GP +QGNLDP +
Sbjct: 310 TPVPMTLFSKGAMHSLTEQAQ-TGYDVIGLDWTIDPEEARKLA--GPNVTLQGNLDPQDM 366
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 367 YKSPEELRELVLTMVRKFGKHRYIANLGHGITPQTPVESMSVLVQAVH 414
>gi|254363142|ref|ZP_04979191.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica PHL213]
gi|153095036|gb|EDN75587.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica PHL213]
Length = 354
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 189/349 (54%), Gaps = 15/349 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E K + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLN-PNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGP+ P+ + ++ L P+ +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVASLNDVNQLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 121 LQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPNI 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LLD LSD YL AQI A + +FDT G L +++ ++ + +I+ + R+
Sbjct: 178 LRKLLDKLSDRVILYLNAQIKADAQAVMVFDTWGGVLAHEDYKAFSLHYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMR 293
K F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP
Sbjct: 238 NEGRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRIGDKVALQGNMDPSV 296
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
L + + V IL G+G +FNLGHGI P PK +D +
Sbjct: 297 LYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVPVESPKVFVDAI 345
>gi|119496773|ref|XP_001265160.1| uroporphyrinogen decarboxylase [Neosartorya fischeri NRRL 181]
gi|119413322|gb|EAW23263.1| uroporphyrinogen decarboxylase [Neosartorya fischeri NRRL 181]
Length = 364
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 192/345 (55%), Gaps = 24/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LT+QP+ RY
Sbjct: 13 LLRAARGERVPRPPIWVMRQAGRYLPEYHEAKGN-RDFFECCRNPEIASTLTIQPVDRYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ + +++ N+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVNVKEELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKTWIYKYPKESQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ +G ++Q+FD+ AG + F+ ++ + R ISA K
Sbjct: 189 ALLQKIAEICVEYLALQVASGAQLVQVFDSWAGEMSPAAFKTFSLPYL-RYISANLPKRL 247
Query: 239 NAKFIS------FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDP 291
+A + FAKGA Y L++ + N +GLDW + A+++ K +QGN DP
Sbjct: 248 DAMGLERVPMTVFAKGAWYALEDLCG-SGYNVVGLDWLHDPAEAMQIAKGRVTIQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + + V ++ G +I NLGHGITP V P ++
Sbjct: 307 GILYGSREAITEAVEVMVKGFQGGKQGWIANLGHGITPFVKPDDL 351
>gi|300932459|ref|ZP_07147715.1| uroporphyrinogen decarboxylase [Corynebacterium resistens DSM
45100]
Length = 378
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 185/361 (51%), Gaps = 31/361 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGR LPEYRQ+R+ LD C+ PE E+T+QP+RR++
Sbjct: 25 LLAAARGEKPTRRPVWMMRQAGRSLPEYRQVREGIA-MLDSCFMPELLAEITMQPVRRHD 83
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G + V GP M + + T E P + + PI Q
Sbjct: 84 ADAAILFSDIVVPLKAAGVEIDIVPGRGPVMAEAVRTPEQIAALPEV--HREQMEPIAQG 141
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS + ++L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+ L+
Sbjct: 142 ISYILEELRDDQVLIGFAGAPFTLASYLVEGGPSKNHETTKALMYSEPETWHELMRALTP 201
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+L Q+ AGVD IQ+FD+ AG L ++ + +I V R Y I F
Sbjct: 202 TIIRFLQMQLEAGVDAIQLFDSWAGYLTARDYREFVQPYSKQIFDTV-RPY-GVPMIHFG 259
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA------------LELQ---KEGPVQGNLDP 291
G G +L + + + +G+DW VP+ A LELQ + +QGNLDP
Sbjct: 260 VGTGELLGDL-AVAGPDVLGVDWRVPMDVAAERVNAALADSRLELQQGDQTKALQGNLDP 318
Query: 292 MRLVVG--------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G +++ + NAI L G IFNLGHG+ P DP + + V +
Sbjct: 319 AVLFAGSDAIKRHVSRICAEADNAIDRGLARG-HIFNLGHGVLPSTDPDAITRAFEEVHN 377
Query: 344 E 344
+
Sbjct: 378 Q 378
>gi|288555326|ref|YP_003427261.1| uroporphyrinogen decarboxylase [Bacillus pseudofirmus OF4]
gi|288546486|gb|ADC50369.1| uroporphyrinogen decarboxylase [Bacillus pseudofirmus OF4]
Length = 347
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 192/341 (56%), Gaps = 17/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN
Sbjct: 11 LKACRGEAHDHVPVWYMRQAGRSQPEYRKIKEKYSLF-EITHQPELCAYVTKLPVDQYNN 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP +D PI + +++ ++NP D+ +
Sbjct: 70 DAAILYKDIMTPLPAIGVDVEIKSGIGPVIDNPIRSKGDVEKLGMINPEEDVPY-----V 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +LR++L + LI F GAP+T+ASYMI GG K++ + + F Y A++ L+D
Sbjct: 125 LDTIKLLREQL--TVPLISFGGAPFTLASYMIEGGPSKNYNKTKAFMYAEPEAWHMLMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L DV+ Y+ +QI AG IQIFD+ G L ++ + + RI + +R++ N I
Sbjct: 183 LGDVTITYVKSQIAAGAQAIQIFDSWVGALNVADYRAFVKPVMNRIFTELRKE--NVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L + +GLDW + ++ A E + VQGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLANEWNDLP-LDVVGLDWRLSVNEARERGIQKTVQGNLDPAILLAPWNVIEE 299
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + S FIFNLGHG+ P+V+P + L V
Sbjct: 300 RAKAILDQGMQSDNFIFNLGHGVFPEVNPDTLRRLTAFVHE 340
>gi|171696110|ref|XP_001912979.1| hypothetical protein [Podospora anserina S mat+]
gi|170948297|emb|CAP60461.1| unnamed protein product [Podospora anserina S mat+]
Length = 369
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 188/347 (54%), Gaps = 25/347 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C +PE LTLQPI R+
Sbjct: 14 LLRAARGETVERPPIWVMRQAGRYLPEYHEA-KGGRDFFECCRSPEIASTLTLQPIERFG 72
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP DP+ T Q I L+ ++D+ L+
Sbjct: 73 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPDPLQTPQDKQYIELMERHVDVAKELD 132
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ RKKL + L GF GAPWT+ YM+ GG K Q + + Y+
Sbjct: 133 Y---VYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKQVKTWIYKYPEETK 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS--AVRRK 236
LL +S++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I +R K
Sbjct: 190 ALLQKISELCVEYLALQVKAGAQIVQVFDSWAGELSPSSFKKFSQPYLAYIAKHLPLRLK 249
Query: 237 ---YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDP 291
+ F KGA Y L + IG+DW + A+++ + PV QGN DP
Sbjct: 250 ELGLEQVPMVVFPKGAWYALDACADM-GYQVIGMDWLHDPAEAVKIIGDRPVVLQGNADP 308
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP----FIFNLGHGITPQVDPKNV 334
L ++ + D V ++ +I NLGHGITP V+P ++
Sbjct: 309 GVLYGSHESITDVVTEMVKGFSWAERKKGWIVNLGHGITPFVNPDDL 355
>gi|259508504|ref|ZP_05751404.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
gi|29611771|sp|Q8FSD6|DCUP_COREF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|259163916|gb|EEW48470.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
Length = 359
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 185/349 (53%), Gaps = 21/349 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ G P+W MRQAGR LPEY ++R+ + LD C+ PE E+T+QP+RR++
Sbjct: 18 LLDAAHGKTPTRTPVWFMRQAGRSLPEYLKVREGI-SMLDSCFMPELLAEITMQPVRRHD 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G V V GP MD P+ T+ N+ + + + + +
Sbjct: 77 VDAAILFSDIVVPLRAAGVGVEIVPGRGPVMDQPVRTRADI---DNLPILDHEVTEVSKG 133
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
ISI+ +L + LIGF GAP+T+ASY++ GG K+H + + + ++ L++ L
Sbjct: 134 ISIILDELTDTQALIGFAGAPFTLASYLVEGGPSKNHERTKAMIHAEPETWHALMERLVP 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
+L QI AG+D +Q+FD+ AG L E ++ + RI+ V + + P I F
Sbjct: 194 TVVNFLKTQIDAGIDAMQLFDSWAGFLTERDYTEHVLPYSTRILQEVEQYQLPR---IHF 250
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGP--VQGNLDPMRLVVGNQVM 301
G G +L R S +G+DW VPL A E GP +QGNLDP L G + +
Sbjct: 251 GVGTGELLGAMSR-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGTEPL 309
Query: 302 IDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+N I + + IFNLGHG+ P +N+ + V + +
Sbjct: 310 TREINRIKGEAAAAIAAGNATGHIFNLGHGVLPNTVAENITEAVSIIHA 358
>gi|110637194|ref|YP_677401.1| uroporphyrinogen decarboxylase [Cytophaga hutchinsonii ATCC 33406]
gi|123163791|sp|Q11X05|DCUP_CYTH3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110279875|gb|ABG58061.1| uroporphyrinogen decarboxylase [Cytophaga hutchinsonii ATCC 33406]
Length = 344
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 20/351 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL +G + P+WLMRQAGR LPEYR +R+K F+++C TP E+T+
Sbjct: 1 MQYQNDLILRAARGEAVERTPVWLMRQAGRILPEYRAVREKLSGFIELCTTPALAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL--- 117
QP+ DAAI+FSDILVI +A+G E++GP + T +ID L
Sbjct: 61 QPVDILGVDAAIIFSDILVIPEAMGLPYEMQESKGPFFPKVITS-----AADIDALLATD 115
Query: 118 --NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++L ++ +I + K+L + LIGF GAP+T+ +YMI G K + R F Y
Sbjct: 116 AADHLTYVYDAIELAVKELNGRVPLIGFAGAPFTILAYMIEGQGSKTFSKARRFLYTEPV 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ ++ + YL Q+ AG + QIFD+ AG L ++ ++ R + +I AV
Sbjct: 176 LAHRLLEKITLATIAYLKRQVQAGAAMYQIFDSWAGVLPPDQYREFSLRYIKQICEAV-- 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPM 292
P F+KGA ++ +++ +GLDW++ + + ++ GP +QGN+DP
Sbjct: 234 --PQVPRTVFSKGAFFVREDFNNFP-CETVGLDWNMDIGESKKII--GPHKTLQGNMDPC 288
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + +LD G+ I NLGHG+ P D V V V+
Sbjct: 289 ALYLSEEQIRVKAKEMLDAFGTQSHIANLGHGLYPDTDKTKVKCFVDAVKE 339
>gi|25027014|ref|NP_737068.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
gi|23492294|dbj|BAC17268.1| putative uroporphyrinogen decarboxylase [Corynebacterium efficiens
YS-314]
Length = 383
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 185/349 (53%), Gaps = 21/349 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ G P+W MRQAGR LPEY ++R+ + LD C+ PE E+T+QP+RR++
Sbjct: 42 LLDAAHGKTPTRTPVWFMRQAGRSLPEYLKVREGI-SMLDSCFMPELLAEITMQPVRRHD 100
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G V V GP MD P+ T+ N+ + + + + +
Sbjct: 101 VDAAILFSDIVVPLRAAGVGVEIVPGRGPVMDQPVRTRADI---DNLPILDHEVTEVSKG 157
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
ISI+ +L + LIGF GAP+T+ASY++ GG K+H + + + ++ L++ L
Sbjct: 158 ISIILDELTDTQALIGFAGAPFTLASYLVEGGPSKNHERTKAMIHAEPETWHALMERLVP 217
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
+L QI AG+D +Q+FD+ AG L E ++ + RI+ V + + P I F
Sbjct: 218 TVVNFLKTQIDAGIDAMQLFDSWAGFLTERDYTEHVLPYSTRILQEVEQYQLPR---IHF 274
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGP--VQGNLDPMRLVVGNQVM 301
G G +L R S +G+DW VPL A E GP +QGNLDP L G + +
Sbjct: 275 GVGTGELLGAMSR-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGTEPL 333
Query: 302 IDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+N I + + IFNLGHG+ P +N+ + V + +
Sbjct: 334 TREINRIKGEAAAAIAAGNATGHIFNLGHGVLPNTVAENITEAVSIIHA 382
>gi|259486354|tpe|CBF84124.1| TPA: uroporphyrinogen decarboxylase (AFU_orthologue; AFUA_1G05060)
[Aspergillus nidulans FGSC A4]
Length = 363
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 192/346 (55%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G+ ++ PPIW+MRQAGRYLPEY + + ++F + C PE +T+QP+ RY
Sbjct: 12 LLRAAWGDKVHRPPIWVMRQAGRYLPEYHEAKGN-RDFFECCRDPEIASTITIQPVDRYE 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ + +++ + ++ L+
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLRSPTDGQYEKVMARDVDVKAELD 130
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q + + Y+ +
Sbjct: 131 Y---VYKAITLTRTKLNGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPKESQ 187
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + R+
Sbjct: 188 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFQDFSLPYLRHISANLPRRLK 247
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L++ L +S N +GLDW + A ++ +QGN D
Sbjct: 248 EMGLEPVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAFKIANGRVTIQGNAD 304
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + + V ++ G +I NLGHG+TP V+P ++
Sbjct: 305 PGVLYGGREAIKQAVETMVAGFKKGKQGWIANLGHGVTPFVNPDDL 350
>gi|225680829|gb|EEH19113.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb03]
gi|226292528|gb|EEH47948.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb18]
Length = 365
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 192/350 (54%), Gaps = 33/350 (9%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G I PPIW+MRQAGRYLPEY Q++ + +F C +PE LTLQP+ RY+
Sbjct: 13 LLRAARGEKIERPPIWVMRQAGRYLPEYHQVKGQ-HDFFACCRSPEIASTLTLQPVERYS 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P+ T Q LL+ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPVKTPSDPQYQQLLDKQVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPAASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY--------AARSVGRII 230
LL ++++ E+L Q+ AG ++Q+FD+ AG L F + +A R+
Sbjct: 189 ALLQKIAEICVEHLALQVEAGAQLVQVFDSWAGELSPASFAEFSLPYLRYISAHLPKRLA 248
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQG 287
+ + P FAKGA Y L L +S + + LDW + A+++ K +QG
Sbjct: 249 EMGQERVP---MTVFAKGAWYALDV---LCESGYDVVSLDWLQDPAEAVKIAKGRVTLQG 302
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
N DP L + + V ++ G +I NLGHG+TP VDP+++
Sbjct: 303 NADPGCLYGSREAITAVVENMVKGFWDGRRQGWIANLGHGVTPLVDPEDL 352
>gi|46108958|ref|XP_381537.1| hypothetical protein FG01361.1 [Gibberella zeae PH-1]
Length = 366
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 185/343 (53%), Gaps = 19/343 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + PP+W+MRQAGRYLPEY + + ++F + C PE E+TLQP+RR+
Sbjct: 13 LLRTAWGQTVERPPMWVMRQAGRYLPEYHEAKGN-RDFFECCRDPEVATEITLQPVRRFA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYL 120
DAAI+FSDILVI A+G V V+ +GP P Q +L ++D+ + L
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLKSPDDGQYGQVLAKDVDVAVE-L 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+ L
Sbjct: 131 GYVYDAITLTRQKLDGQVPLIGFCGAPWTLFCYMVEGGGTKLFAQVKTWIYKYPEEAKKL 190
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L ++D+ E+L Q+ AG ++ +FD+ AG LG + ++ + +I + K +
Sbjct: 191 LSKIADICVEHLALQVKAGAQLVMVFDSWAGELGPASYRQFSEPYLKQIAEKLPAKIQSL 250
Query: 240 ----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMR 293
F KGA Y L + L N +G+DW A++++ + + QGN DP
Sbjct: 251 GLEKVPMTVFPKGAWYALDSACNL-GYNVVGMDWLHDPKEAVKIRGDRNIVFQGNADPGV 309
Query: 294 LVVGNQVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNV 334
L + + V +++ +G +I NLGHGITP V+P ++
Sbjct: 310 LYGTKEAITKAVEEMVEGFWVGDKGWIANLGHGITPGVNPDHL 352
>gi|312131419|ref|YP_003998759.1| uroporphyrinogen decarboxylase [Leadbetterella byssophila DSM
17132]
gi|311907965|gb|ADQ18406.1| uroporphyrinogen decarboxylase [Leadbetterella byssophila DSM
17132]
Length = 339
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 186/339 (54%), Gaps = 11/339 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGR L EYR++R K +F+ + TPE E+TLQP+
Sbjct: 8 LLRAARGEKTERVPVWMMRQAGRILKEYREVRAKAGSFIALATTPELAAEVTLQPVDILG 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLL-NPNIDLFLNYLLPIF 124
DAAI+FSDILV+ +A+G VE +GP T ++I LL ++ L+Y ++
Sbjct: 68 VDAAIIFSDILVVPEAMGLPYEMVEAKGPYFPKTVKTKEDIDLLVTTEMEDRLSY---VY 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+S+ I++++L + LIGF GAP+T+ YMI G K + + Y + + LL+ +
Sbjct: 125 ESMDIVKRELGGRVPLIGFAGAPFTIFCYMIEGQGSKTFSKAKKVLYSDPEFAHTLLNKI 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + YL ++ G D++QIFD+ AG L ++ ++ + RI A +P
Sbjct: 185 TEATISYLKGKVKHGADLLQIFDSWAGVLSPAQYSAFSIPYLKRISDA----FPEVPVTL 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F+KGA + K+ L+ + +GLDW++ + + EL +QGNLDP L +
Sbjct: 241 FSKGAFFARKDLGELS-CDVVGLDWNMDIRESRELIPNKTLQGNLDPCVLYSPFSEVEKQ 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ G +I NLGHG+ P DP+ V ++TV++
Sbjct: 300 TKTMVQAFGKERYIANLGHGVYPDTDPEKVKCFIETVKA 338
>gi|149922633|ref|ZP_01911061.1| uroporphyrinogen decarboxylase [Plesiocystis pacifica SIR-1]
gi|149816519|gb|EDM76016.1| uroporphyrinogen decarboxylase [Plesiocystis pacifica SIR-1]
Length = 325
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 185/329 (56%), Gaps = 21/329 (6%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR IR K +FL++C TPE E+TLQPI R + DAAILFSDILV+ DA+
Sbjct: 1 MRQAGRYLPEYRAIRSKV-SFLELCRTPELAAEVTLQPIDRLDVDAAILFSDILVVFDAM 59
Query: 85 GRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
V F GP++ P+ T+ + P + L + ++ +K L + +
Sbjct: 60 DVAVEF--KPGPQLPSPVRTRADVEGLRWGEP-----VGELEYVMNAVRACKKALADRVP 112
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCGAP+T SY+I GG +D + + + F L+ +SD+ A YLI QI AG
Sbjct: 113 LIGFCGAPFTTCSYLIEGGGSRDFLEVKKLLFTEPALFRSLMANMSDLLARYLIGQIDAG 172
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-----FISFAKGAGYMLK 254
VD +QIFD+ AG LG ++ + ++ V+ P + I FA+G +L
Sbjct: 173 VDAVQIFDSWAGALGPRDYIEHVLPHTRTLVERVQAHIPEGRDQPVPVILFARGNMNILG 232
Query: 255 NYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAIL-DVL 312
++ ++ +G+DWS+ + A+E+ + VQGNLDP L+ +++ D V +L +
Sbjct: 233 ATAQVP-ADVVGVDWSIGMDQAIEIVGSDRVVQGNLDPGVLLGSPELIRDRVRDVLREAA 291
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G+ IFNLGHGI+ +P + +V V
Sbjct: 292 GAKAHIFNLGHGISRVTNPDHAKAMVDAV 320
>gi|124265327|ref|YP_001019331.1| uroporphyrinogen decarboxylase [Methylibium petroleiphilum PM1]
gi|171769831|sp|A2SC07|DCUP_METPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|124258102|gb|ABM93096.1| uroporphyrinogen decarboxylase [Methylibium petroleiphilum PM1]
Length = 372
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 182/340 (53%), Gaps = 24/340 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYL EYR R K +F+ + P+Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 30 PVWLMRQAGRYLSEYRDTRAKAGSFMGLATNPQYATEVTLQPLDRYPLDAAILFSDILTV 89
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ + L P+++ L Y +F +++ +R+ L
Sbjct: 90 PDAMGLGLSFAQGEGPRFAHPLRDEADVAKLQVPDMEK-LRY---VFDAVASIRRALAPA 145
Query: 135 --PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
P + LIGF G+PWT+A YM+ G D+ + Y+ + +L+ +D A YL
Sbjct: 146 GAPGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTLLYRRPDLMHRILEVNADAVAAYL 205
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAG 250
AQI AG + IFD+ G L + F+ ++ R++ ++++ + I F KG G
Sbjct: 206 NAQIEAGAQAVMIFDSWGGVLADGAFQRFSLAYTERVLRQLKKEQGGYRVPQIVFTKGGG 265
Query: 251 YMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
L+ + DS + +GLDW++ L A + +QGNLDP L + + V
Sbjct: 266 LWLEA---IADSGCDVVGLDWTMNLGAARARVGDRVALQGNLDPNVLFADPEQIRAEVAR 322
Query: 308 ILDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LD G+ +FNLGHGI+ P +V LV V S
Sbjct: 323 TLDSYGAPSAGSGHVFNLGHGISQHTPPDSVSVLVDAVHS 362
>gi|238486576|ref|XP_002374526.1| uroporphyrinogen decarboxylase [Aspergillus flavus NRRL3357]
gi|317144150|ref|XP_001819939.2| uroporphyrinogen decarboxylase [Aspergillus oryzae RIB40]
gi|220699405|gb|EED55744.1| uroporphyrinogen decarboxylase [Aspergillus flavus NRRL3357]
Length = 363
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C +PE LT+QP+ RY
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEYHEA-KGGRDFFECCRSPEIASTLTIQPVERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKQVDVKEELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I + R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 132 Y---VYKAIRLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWVYKYPKESQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + ++
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPKRLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDW-SVPLSFALELQKEGPVQGNLD 290
FAKGA Y L + L +S N +GLDW P +QGN D
Sbjct: 249 EMGLEPVPMTVFAKGAWYALDD---LCESGYNVVGLDWLHDPAEARRIANGRVTIQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + + V ++ G +I NLGHG+TP V P ++
Sbjct: 306 PGMLYGGRAAITETVETMVKGFEKGKQGWIANLGHGVTPFVKPDDL 351
>gi|319786377|ref|YP_004145852.1| uroporphyrinogen decarboxylase [Pseudoxanthomonas suwonensis 11-1]
gi|317464889|gb|ADV26621.1| uroporphyrinogen decarboxylase [Pseudoxanthomonas suwonensis 11-1]
Length = 357
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 18/348 (5%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M PE E+TLQP+RR+
Sbjct: 9 RLLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLAMAKNPELACEVTLQPLRRF 68
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + DA+G + F E EGP+ + PI + L P+++ L Y +
Sbjct: 69 PLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPIRDEADVARLAVPDMETELGY---V 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG ++ + + A+ + LL
Sbjct: 126 MDAVRVIRRELDGSVPLIGFSGSPWTLACYMVEGGGSDNYSKIKAMAFNRPELLHRLLGV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-- 241
+++ YL AQ AG +Q+FDT G L + ++ + RI + R +
Sbjct: 186 VTESVIAYLAAQRAAGAQALQVFDTWGGVLSPTLYREFSLPYLQRIARELERGEGEDRTP 245
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQ 299
I F KG L+ T ++A+G+DW V L+ A + G V QGNLDP L +
Sbjct: 246 LILFGKGNAPYLEVL-AATGTDAVGVDWLVDLAEAAR-RTGGKVALQGNLDPATLYGSPE 303
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ +LD G +FNLGHG++P + P++V LV+ V
Sbjct: 304 AIASEAARVLDSYAEGNGGSREGHVFNLGHGMSPDMSPEHVAALVEAV 351
>gi|307211421|gb|EFN87548.1| Uroporphyrinogen decarboxylase [Harpegnathos saltator]
Length = 356
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 188/352 (53%), Gaps = 18/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE++++R + +F +C T ++TLQPI
Sbjct: 10 KNDRILRAARGEPVDRVPVWVMRQAGRYLPEFQEVRARH-DFFTVCQTSALASQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT--TQEIYLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V V GP + P+ + L+ PN++ L Y
Sbjct: 69 LRFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLINPSDLARLVRPNVEEALKY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 128 --VGDAITLTRHKLDGKVPLIGFSGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YLI Q+ AG ++Q+F+++ L + F NY+ + + +I VR +
Sbjct: 186 LQMITDVIVDYLIMQVKAGAQLLQVFESNGDYLDDTLFTNYSFKYLKQISKRVREQLKKE 245
Query: 238 --PNAKFISFAKGAGYMLKNYRRLTDSNA---IGLDWSV-PLSFALELQKEGPVQGNLDP 291
P I F KGA +K+ L + IGLDW++ P L +QGN+DP
Sbjct: 246 NIPEVPMIVFPKGA--TMKSLEILAKDQSYEVIGLDWTIDPAEARKCLGPNVTLQGNMDP 303
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++D ++ G +I NLGHGI P ++ +K V +
Sbjct: 304 CAMYSSQDEIVDRAQKMVVKFGKDRYIANLGHGILPDTPIPSMQAFIKGVHT 355
>gi|15605850|ref|NP_213227.1| uroporphyrinogen decarboxylase [Aquifex aeolicus VF5]
gi|6014936|sp|O66667|DCUP_AQUAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|170292161|pdb|2EJA|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Aquifex Aeolicus
gi|170292162|pdb|2EJA|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Aquifex Aeolicus
gi|2983013|gb|AAC06624.1| uroporphyrinogen decarboxylase [Aquifex aeolicus VF5]
Length = 338
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 192/341 (56%), Gaps = 18/341 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G I P+WLMRQAGRY+PEYR+IR + KNFL++C + E++L P++
Sbjct: 7 LLRSLRGEPIGRFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPLKILG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DA I+FSDILV + LG V FVE EGP++ ++ +P+ + Y+ I +
Sbjct: 67 VDAIIIFSDILVPLEPLGVKVEFVEGEGPKLSWSGKVSDLKKYDPSQN---AYVYEIIKR 123
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ K+ + + +IGF GAP+T+ SY+I GG KD ++F ++N + + L+D L++
Sbjct: 124 V----KEAQDEVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTE 179
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL QI AG DV+QIFD+ L ++ Y V +IS + + + + I F
Sbjct: 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISEL-KDFSDTPVIYFF 238
Query: 247 KGAGYMLK---NYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+G+ + +YR ++A+ +DWSV + ++ +G QGNL+P L +V+ +
Sbjct: 239 RGSSSFIDLAVDYR----ADALSVDWSVDIPELFKIYDKG-FQGNLEPAVLYASEEVIEE 293
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L + ++FNLGHG+ P ++ + V LV V+S
Sbjct: 294 KTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKS 334
>gi|145229089|ref|XP_001388853.1| uroporphyrinogen decarboxylase [Aspergillus niger CBS 513.88]
gi|134054952|emb|CAK36961.1| unnamed protein product [Aspergillus niger]
Length = 363
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 188/346 (54%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C PE LT+QPI RY
Sbjct: 13 LLRAARGEKVQRPPIWVMRQAGRYLPEYHEA-KAGRDFFECCRDPEVASTLTIQPIDRYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P Q ++ ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLQSPDDGQYEKVMQKDVDVKSELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 132 Y---VYKAITLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKKWIYKYPKESQ 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + +K
Sbjct: 189 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPAAFKSFSLPYLRHISANLPKKLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDW-SVPLSFALELQKEGPVQGNLD 290
FAKGA + L++ L +S N +GLDW P +QGN D
Sbjct: 249 EMGLEPVPMTVFAKGAWFGLED---LCESGYNVVGLDWLHDPAEARRIANGRVTIQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L G + + + V ++ G +I NLGHG+TP V+P ++
Sbjct: 306 PGVLYGGREAITEAVETMVRGFEKGKQGWIANLGHGVTPFVNPDDL 351
>gi|326384417|ref|ZP_08206097.1| uroporphyrinogen decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196762|gb|EGD53956.1| uroporphyrinogen decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
Length = 342
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/334 (35%), Positives = 184/334 (55%), Gaps = 19/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR + L+ C+ PE E+T+QP+RR++ DAAILFSDI+V
Sbjct: 16 PVWFMRQAGRSLPEYREIRAG-RGMLESCFDPELVAEITMQPVRRHDTDAAILFSDIVVP 74
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G ++ V GP + PI T P +D + + +I + +LP+ +
Sbjct: 75 LRAAGIDLDIVGGTGPVIASPIRTAADVASIPRLDP--AAVGAVTSAIGSILAELPDEKS 132
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY+I GG + + + ++ L+ L+D++ +L AQ+ AG
Sbjct: 133 LIGFAGAPFTLASYLIEGGPSRTYEHTKAMMLAEPELWHTLMGRLTDITITFLRAQLDAG 192
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +Q+FD+ AG L + +E Y A R+++ V I F G G +L + +
Sbjct: 193 VDAMQLFDSWAGTLSKSAYEEYVAPHSTRVMAEVAEY--GVPRIHFGVGTGELLSS---M 247
Query: 260 TD--SNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMID-GVNAILDV---- 311
TD ++ IG+DW +PL A + VQGNLDP L+ G+ +++ ++ I+
Sbjct: 248 TDVGADVIGVDWRIPLDEAAARVGHRVAVQGNLDPTVLLAGDDAVLEREIDRIVAAGRRA 307
Query: 312 --LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P D + V+ + S
Sbjct: 308 VDAGAPGHIFNLGHGVLPNTDAGVITRAVELIHS 341
>gi|313679942|ref|YP_004057681.1| uroporphyrinogen decarboxylase [Oceanithermus profundus DSM 14977]
gi|313152657|gb|ADR36508.1| uroporphyrinogen decarboxylase [Oceanithermus profundus DSM 14977]
Length = 341
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 179/329 (54%), Gaps = 17/329 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+IR+++ ++ PE T E+T P++++ FDAAILF+DI
Sbjct: 18 PVWFMRQAGRYQPEYRKIRERY-TLPEIVRHPEVTAEVTRLPVQQFGFDAAILFADITTP 76
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G ++ VE +GP + +PI T E I+L + + ++I IL+ +L
Sbjct: 77 LYGMGFDLDIVEGKGPVIHNPIDTPEDVRRIHLFSAEAHTPF-----VLEAIRILKAEL- 130
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASY+I GG K+ + + F Y A++ L+ L++ EYL AQ
Sbjct: 131 -EVPLIGFAGAPFTLASYLIEGGPSKNFVKVKGFMYAEEEAWDLLMRTLTNAMVEYLSAQ 189
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
AG D +Q+FD+ G L H++E Y A + R+ A+ K + F ++L
Sbjct: 190 ARAGADALQVFDSWVGRLTRHDYERYVAPHMRRLFEAL--KPLGVPVVHFGTQTMHLLSP 247
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ IG+D + PL +A + PVQGNLDP L V+ GV A+L
Sbjct: 248 MAE-AGGDVIGVDTTTPLDWARDRLGARPVQGNLDPTLLFAPEPVLARGVEAVLSANAGR 306
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P IFNLGHGI P P V V+ V S
Sbjct: 307 PGHIFNLGHGILPGTPPDAVRRAVELVHS 335
>gi|255533327|ref|YP_003093699.1| uroporphyrinogen decarboxylase [Pedobacter heparinus DSM 2366]
gi|255346311|gb|ACU05637.1| uroporphyrinogen decarboxylase [Pedobacter heparinus DSM 2366]
Length = 340
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 193/333 (57%), Gaps = 17/333 (5%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+ DAAILFSDILV
Sbjct: 17 PPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPVDLLGIDAAILFSDILV 75
Query: 80 IADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G ++ F + GP+ +P+ T +++ L ++ L+ L + +I +++++L
Sbjct: 76 TGEAMGGDLSFTQGIGPKFANPVRTLKDVEALEVDV---LDRLQYVADAIKVIQQRLNGS 132
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF GAP+TV SY++ GG KD ++ + + LL ++ V+A+YL QI
Sbjct: 133 IPLIGFAGAPFTVMSYLVEGGSSKDFKLTKLLMHNQPEVAHKLLAKIAKVTADYLNLQIA 192
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AGV+ IQIFD+ A L ++++ ++ R + II+ + RK + ISF KG+ +
Sbjct: 193 AGVNAIQIFDSWALALSWNDYQEFSHRYIQEIIANLNRK--DIPVISFCKGSS-VFAPIM 249
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGP----VQGNLDPMRLVVGNQVMIDGVNAILDVL- 312
+ I +DW+ L L ++ P VQGNLDP L V+ + + + +
Sbjct: 250 AEAKPDVISVDWNADL---LNIKNSLPAGIAVQGNLDPHILYADKPVIKKEILRLFERMR 306
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G FIFNLGHGI P + NV ++ ++ K
Sbjct: 307 GQNGFIFNLGHGIMPDIPFDNVKYAIEVIKEFK 339
>gi|145294554|ref|YP_001137375.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum R]
gi|166234246|sp|A4QB76|DCUP_CORGB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|23507700|gb|AAN38293.1| uroporphobilinogen decarboxylase [Corynebacterium glutamicum]
gi|140844474|dbj|BAF53473.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 358
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 184/349 (52%), Gaps = 21/349 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQP+RR++
Sbjct: 18 IIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQPVRRHD 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G V V GP +D P+ ++E L N+ + + + Q
Sbjct: 77 VDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSREDVL---NLPILEGNVPEVEQG 133
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L+ L
Sbjct: 134 IGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHALMARLVP 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
L +QI AG+D +Q+FD+ AG L E ++ + I+ V + + P I F
Sbjct: 194 TIVNSLKSQIDAGIDAMQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKYQLPR---IHF 250
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGP--VQGNLDPMRLVVGNQVM 301
G G +L + S +G+DW VPL A E GP +QGNLDP L G +
Sbjct: 251 GVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGRAPL 309
Query: 302 IDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I +D + IFNLGHG+ P +++ + V + S
Sbjct: 310 TKEIERIKAEAQTAIDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 358
>gi|302925262|ref|XP_003054064.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735005|gb|EEU48351.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 366
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 190/353 (53%), Gaps = 23/353 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + PP+W+MRQAGRYLPEY + + ++F + C PE +TLQP++RY
Sbjct: 13 LLRAAWGQTVERPPMWVMRQAGRYLPEYHEAKGN-RDFFECCRDPEVATTITLQPVQRYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P+ T Q +L N+D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMVVEMVDKKGPHFPSPLKTPDDEQYGQVLAKNVDVAAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y +++++++ R++L + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 132 Y---VYKAVTLTRQRLQGQVPLIGFCGAPWTLFCYMVEGGGTKLFAQVKTWIYRYPEESK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++D+ ++L Q+ AG ++ +FD+ AG LG + ++ + RI + K
Sbjct: 189 KLLAKIADICVDHLALQVKAGAQLVMVFDSWAGELGPASYRQFSEPYLKRIAEKLPEKLK 248
Query: 239 -----NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDP 291
F KGA Y L + L N +G+DW A++++ + + QGN DP
Sbjct: 249 ALGLDKVPMTVFPKGAWYALDSACDL-GYNVVGMDWLHDPKEAVKIRGDRNIVFQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++D +G+ +I NLGHGITP V+P N+ + V
Sbjct: 308 GVLYGTKEGITTAVQEMVDGFWVGNKGWIANLGHGITPGVNPDNLKHFFEEVH 360
>gi|163848148|ref|YP_001636192.1| uroporphyrinogen decarboxylase [Chloroflexus aurantiacus J-10-fl]
gi|222526049|ref|YP_002570520.1| uroporphyrinogen decarboxylase [Chloroflexus sp. Y-400-fl]
gi|189083001|sp|A9WIS6|DCUP_CHLAA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767691|sp|B9LKR9|DCUP_CHLSY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163669437|gb|ABY35803.1| uroporphyrinogen decarboxylase [Chloroflexus aurantiacus J-10-fl]
gi|222449928|gb|ACM54194.1| uroporphyrinogen decarboxylase [Chloroflexus sp. Y-400-fl]
Length = 355
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 190/346 (54%), Gaps = 13/346 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ PIWLMRQAGRY+PEYR IR+++ FL M TPE E+TLQP++
Sbjct: 2 RDRFLRACRRQPVDRTPIWLMRQAGRYMPEYRAIRERY-GFLQMVKTPEVAAEVTLQPVQ 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID--LFLNYLL 121
+ DAAI+F+DIL + LG + + + EGP + +PI + + + D + Y L
Sbjct: 61 AFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPRETVAYTL 120
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
Q L K+ N + LIGF GAP+T+ASY I GG +++ + F Y+ A++ L+
Sbjct: 121 AALQ----LVKRELNGLPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLM 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ LS + A+YLIAQI AG D +QIFD+ AG L ++ Y R ++ +R + +
Sbjct: 177 ERLSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIRARLGDVT 236
Query: 242 --FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I F + R++ ++ +G+DW + L A + VQGNLDPM L
Sbjct: 237 PPIIYFGTDMAGLAGEVRQI-GADVLGVDWRIDLDVAWAQYGFNHAVQGNLDPMTLFAPP 295
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ IL+ G P IFNLGHGI + +V LV+ V+S
Sbjct: 296 SIIAARARDILERAGGRPGHIFNLGHGILTETPVDHVRYLVEFVQS 341
>gi|262199055|ref|YP_003270264.1| uroporphyrinogen decarboxylase [Haliangium ochraceum DSM 14365]
gi|262082402|gb|ACY18371.1| uroporphyrinogen decarboxylase [Haliangium ochraceum DSM 14365]
Length = 354
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 198/348 (56%), Gaps = 20/348 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L + ++ PP+W+MRQAGRYLP+Y+ +R K +FL++C TPE E+TLQPI + F
Sbjct: 13 LRACRREPVDRPPVWMMRQAGRYLPQYQAVRSKV-SFLELCKTPELACEVTLQPIDEFGF 71
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV +A+G + F + GP++ P+ + L P+ + + Y +
Sbjct: 72 DAAILFSDILVPIEAMGMELVFGDG-GPKLPQPLRDRAAIDKLSVPDPEEAMPY---VTG 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++RK+L + LIGFCGAP+T+A+Y I GG K + + + + + + LLD L+
Sbjct: 128 AVRLIRKELGGRVPLIGFCGAPFTLATYAIEGGGSKSYPHTKSMMFSDPASTHALLDKLA 187
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR----KYPNAK 241
A YL AQ+ AG +QIFD+ AG L +F +A R II +R +
Sbjct: 188 KCCAVYLEAQVAAGAQAVQIFDSWAGILAPRDFREFALRYAKAIIDELRASPTWRDGGVP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F G L++Y ++ +G+DW + L+ A L ++ +QGNLDP L + +
Sbjct: 248 IIYFVNGCAPYLEDY-ATCGADVLGVDWRIDLAAARAGLGEKVALQGNLDPTCLFLPPEQ 306
Query: 301 MIDGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LDV+ S P IFNLGHG+ P +P++V +V TV++
Sbjct: 307 L---RQRVLDVIASHPGPGHIFNLGHGVLPMTNPEHVRVMVDTVKASS 351
>gi|256395902|ref|YP_003117466.1| uroporphyrinogen decarboxylase [Catenulispora acidiphila DSM 44928]
gi|256362128|gb|ACU75625.1| uroporphyrinogen decarboxylase [Catenulispora acidiphila DSM 44928]
Length = 401
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 177/330 (53%), Gaps = 21/330 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY+++R LD C P+ E+TLQP+RRY DAA+L+SDI+V
Sbjct: 78 PVWFMRQAGRALPEYKKVRTGIP-MLDACLRPDLVTEITLQPVRRYGVDAAVLYSDIVVP 136
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G V V N GP + D +I L+P DL +++ L +L
Sbjct: 137 LKAIGVEVEIVPNVGPVIAHPVRDLSGLDQIRPLDPATDLAFAT-----EAVRQLVGEL- 190
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAP+TVASY+I GG K+H + + F L+D L+D++A ++ Q
Sbjct: 191 GSTPLIGFGGAPFTVASYLIEGGPSKNHEKTKAMMLGAPELFAALMDRLADLTAGFMRVQ 250
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AG V+Q+FD+ AG L ++E Y +++ ++ I F G G +L
Sbjct: 251 VEAGASVVQLFDSWAGALSPRDYERYVMPHSAKVLDSLADL--GVPRIHFGVGTGELLP- 307
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL 312
++ +G+DW VPL A ++ GP VQGNLDP + V+ V +LD
Sbjct: 308 LMAAAGADVVGVDWRVPLDEA--SRRIGPDYAVQGNLDPSVMFAPWPVIETRVREVLDEG 365
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P IFNLGHG+TP +DP + +V+ V
Sbjct: 366 SRTPGHIFNLGHGVTPDMDPDRLARVVELV 395
>gi|310793861|gb|EFQ29322.1| uroporphyrinogen decarboxylase [Glomerella graminicola M1.001]
Length = 365
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 23/345 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP W+MRQAGRYLPEY + + ++F C PE LTLQPI R+
Sbjct: 13 LLRAARGETVERPPCWIMRQAGRYLPEYHEAKGN-RDFFACCRDPEVASTLTLQPIERFA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILV+ ALG V V+ +GP DP++ Q +L ++D+ L+
Sbjct: 72 GLLDAAIIFSDILVVPQALGMTVEMVDKKGPHFPDPLSAPDDGQYEKVLGKSVDVAAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ RKKL + LIGFCGAPWT+ YM+ GG K Q++ + Y++
Sbjct: 132 Y---VYKAITLTRKKLAGRVPLIGFCGAPWTLFCYMVEGGGTKLFMQSKRWIYRHPEESK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL +++V EYL Q+ AG ++ +FD+ AG LG F+ ++ + I + + +K
Sbjct: 189 KLLQKIAEVCVEYLALQVKAGAQLVMVFDSWAGELGPEAFKEFSEPYLAYISANLPKKLA 248
Query: 239 NAKF-----ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDP 291
F KGA + L + + + +GLDW + A++++ + + QGN DP
Sbjct: 249 EMNLERVPMTVFPKGAWHALDSVIDI-GYDVVGLDWLQDPADAVKIRGDRRITFQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNV 334
L ++ M V ++ G +I NLGHGITP V+P+++
Sbjct: 308 GVLYGTHEAMTKAVEVMVKGFGGGKKGWIANLGHGITPGVNPEDL 352
>gi|134098412|ref|YP_001104073.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
gi|291003372|ref|ZP_06561345.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
gi|172044125|sp|A4FAS3|DCUP_SACEN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|133911035|emb|CAM01148.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
Length = 363
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 182/337 (54%), Gaps = 18/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L C TP+ E+T QP+RR+ DAAILFSDI++
Sbjct: 31 PVWFMRQAGRSLPEYRKVREGIP-MLQSCLTPDLVCEITAQPVRRHGVDAAILFSDIVLP 89
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G + V GP + +P+ T P+ L + + ++ +L +L
Sbjct: 90 LHAAGVGLDIVAGTGPVVAEPVRTAADVAALPS--LAPEQVSKVGDAVGLLLDEL-GSTP 146
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG ++H + + + ++ LL+ L+D + +L Q+ AG
Sbjct: 147 LIGFAGAPFTLASYLVEGGPSRNHERTKALMHSEPATWHALLEKLADTTLTFLRTQLAAG 206
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF---ISFAKGAGYMLKNY 256
VD IQ+FD+ AG L ++ + RI V + P A I F G G +L
Sbjct: 207 VDAIQLFDSWAGALSLRDYREFVLPHSRRIFEGV-AETPGAAGVPKIHFGVGTGELLGAM 265
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGP------VQGNLDPMRLVVGNQVMIDGVNAIL 309
R ++ +G+DW VPL A + L++ GP VQGNLDP L G + + V IL
Sbjct: 266 RS-AGADVVGVDWRVPLDTAAQRLREAGPDQGAPVVQGNLDPAVLFAGWEAVEREVRRIL 324
Query: 310 -DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +G IFNLGHG+ P DP + +V+ V +E
Sbjct: 325 AEGRAAGGHIFNLGHGVLPSTDPGVLTRVVELVHAES 361
>gi|331228847|ref|XP_003327090.1| uroporphyrinogen decarboxylase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306080|gb|EFP82671.1| uroporphyrinogen decarboxylase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 387
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 200/374 (53%), Gaps = 46/374 (12%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W+MRQAGRYLPE+R++R+ F ++C TPE E+T+QPI+RY
Sbjct: 16 LLRAARGEKTERSPVWVMRQAGRYLPEFRKLRES-HGFFEICRTPELATEVTMQPIKRYE 74
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNID-----LFL 117
D AI+FSDILVI AL V + N GP +PI+++E ++N I L
Sbjct: 75 GLLDGAIIFSDILVIPQALEMEV--IMNPGPIFPNPISSKEQMEEMINKKISPEELKEKL 132
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
NY ++++I + +L N I L GF GAPWT+ +YM SGG G N A A
Sbjct: 133 NY---VYEAIKLTTLELQNRIPLFGFVGAPWTLFAYMTSGG--GGSGLNASKATSFDTAK 187
Query: 178 NW----------LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVG 227
NW LL+ L+ V A +L+ QI AG ++Q+FD+ AG L +++FE+++ +
Sbjct: 188 NWIQVHPELSARLLEKLALVCALHLVNQIEAGCQIVQVFDSWAGELSDYDFEHFSLPYLR 247
Query: 228 RIISAVRRKYPNAK-----FISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-- 278
R+ + V+ A + FAKGA + ++L S + + LDW V ++A+E
Sbjct: 248 RVSTLVKEGLSQANIHPVPMVVFAKGAN-LPHQLQQLASSGYSTVSLDWKVRPAYAIEAL 306
Query: 279 --LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQVD 330
L +QGNLDP L +Q + V + +G P I NLGHGITP VD
Sbjct: 307 GSLSNSIALQGNLDPAVLHTDHQTIKKYVRLMFANQEAGGFLPHLPHITNLGHGITPGVD 366
Query: 331 PKNVLDLVKTVRSE 344
P+ + ++ V E
Sbjct: 367 PEAMRTFLEAVHEE 380
>gi|170049423|ref|XP_001855944.1| uroporphyrinogen decarboxylase [Culex quinquefasciatus]
gi|167871265|gb|EDS34648.1| uroporphyrinogen decarboxylase [Culex quinquefasciatus]
Length = 384
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++ +R K +F ++C TPE E+T+QP+
Sbjct: 39 KNDNVLRAARGEPVDRVPVWVMRQAGRYLPEFQAVRAK-HDFFEVCRTPELACEVTMQPL 97
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L N ++ L +
Sbjct: 98 RRFDLDASIIFSDILVIPQALGITVEMKPGVGPVLPEPLVGPADLERLNQTGTMDRLKYV 157
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R L I L GF GAPWT+ YMI GG K + + + + A + LL+
Sbjct: 158 GDAITMMRHMLEGRIPLYGFTGAPWTLMGYMIEGGGSKTMSKAKGWLADHPEASHKLLNI 217
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D EYL+ Q+ AG ++Q+F++ A L + ++ A + RI + R++
Sbjct: 218 LTDQVIEYLLLQVRAGAQILQVFESSAEHLSKEQYLTVALPYLKRIRDDLHRRFAEEGIT 277
Query: 244 S-----FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLV 295
F+KGA + L + T + IGLDW++ A L GP +QGNLDP +
Sbjct: 278 PVPLTLFSKGAMHSLPE-QAATGYDVIGLDWTIDPEEARRLV--GPNVTLQGNLDPQDMY 334
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 335 KPKEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMEVLVQAV 380
>gi|320589113|gb|EFX01575.1| uroporphyrinogen decarboxylase [Grosmannia clavigera kw1407]
Length = 368
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 185/357 (51%), Gaps = 24/357 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F + C E LTLQPI R+
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEY-HVAKGGRDFFECCRDAEVASTLTLQPIERFA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYL 120
DAAI+FSDILV+ ALG V ++ +GP DP Q LL + + L
Sbjct: 72 GLIDAAIIFSDILVVPQALGMTVEMIDKKGPHFPAPLADPDDPQVAPLLAKPVAAAADEL 131
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ ++ R+KL + LIGFCGAPWT+ YM+ GG + ++ + Y + L
Sbjct: 132 EYVYAAVRRTREKLHGRVPLIGFCGAPWTLFCYMVEGGGTRLFAHSKRWIYAHPDTSGQL 191
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L++V E+L Q+ AG ++Q+FD+ AG L F +A ++ I A+ R+
Sbjct: 192 LHKLAEVCVEHLARQVQAGAQLVQVFDSWAGELSPAAFRRFAQPALAHIADALPRRLQQL 251
Query: 240 ----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMR 293
I F KGA Y L +L + +GLDW + A+ + + PV QGN DP
Sbjct: 252 GLAPVPMIVFPKGAWYALDACCQLG-YDVVGLDWQHDPAEAVRTRADRPVVLQGNADPGV 310
Query: 294 LVVGNQVMIDGVNAILDVLG------SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + +++ V + V+G +I NLGHGITP V P ++ ++ V +
Sbjct: 311 LYGTHDAIVEAVRDM--VVGFDWANRHQGWIVNLGHGITPFVKPDDLKFFLEEVHRQ 365
>gi|156742005|ref|YP_001432134.1| uroporphyrinogen decarboxylase [Roseiflexus castenholzii DSM 13941]
gi|189083016|sp|A7NKU6|DCUP_ROSCS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|156233333|gb|ABU58116.1| uroporphyrinogen decarboxylase [Roseiflexus castenholzii DSM 13941]
Length = 352
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 13/344 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + + P+W MRQAGRY+PEYR IR+++ FLDM TPE E+T+QP+
Sbjct: 4 HRFLAACRRQPTDATPVWFMRQAGRYMPEYRAIRERY-GFLDMVKTPELAAEITMQPLLA 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
+ DAAI+F+DIL + + +G + + + EGP + +P+ + L + + + Y +
Sbjct: 63 FPVDAAIIFADILPLLEGIGLQLTYEQGEGPVIHNPLRSSADIAALRDADPRETVAYTI- 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
Q+I +++++L LIGF GAP+T+A+Y + GG +DH + Y +A+ L++
Sbjct: 122 --QAIRLVKRELEERAPLIGFSGAPFTLAAYAVEGGSSRDHRLTKALMYAEPQAWRDLME 179
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPN 239
L+ + YLIAQI AG D +Q+FD+ AG L ++ Y V + I VR P
Sbjct: 180 RLTTQVSAYLIAQIEAGADAVQLFDSWAGALAPGDYAEYVLPFVQQCIINVRAGCGVVPP 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F G ML R+ TD++ IGLDW + L G VQGNLDP L+
Sbjct: 240 PPIIYFGVGMSGMLGMLRQ-TDADVIGLDWRIYLDDGWAQVGPGVAVQGNLDPHTLLAPW 298
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ ILD S P IFNLGHGI P+ V L + V
Sbjct: 299 SDVRRRAADILDRAASRPGHIFNLGHGIVPETPVDTVRRLAEFV 342
>gi|83746933|ref|ZP_00943979.1| Uroporphyrinogen decarboxylase [Ralstonia solanacearum UW551]
gi|207744796|ref|YP_002261188.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum IPO1609]
gi|83726353|gb|EAP73485.1| Uroporphyrinogen decarboxylase [Ralstonia solanacearum UW551]
gi|206596206|emb|CAQ63133.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum IPO1609]
Length = 364
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 182/338 (53%), Gaps = 21/338 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PLWLMRQAGRYLPEYNATRARAGSFLSLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ ++ L P++ L Y +F ++S +R+ L
Sbjct: 83 PDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPDM-ASLQY---VFDAVSEIRRALVQG 138
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL
Sbjct: 139 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAAAVTDYLN 198
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGY 251
AQI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 199 AQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGL 258
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T ++A+G+DW+V L A ++ G V QGNLDP L + V +L
Sbjct: 259 WLESMAE-TGADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPDAIRAQVRRVL 316
Query: 310 DVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G +FNLGHGI+ P++V LV V +
Sbjct: 317 EDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHT 354
>gi|300689845|ref|YP_003750840.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum PSI07]
gi|299076905|emb|CBJ49518.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum PSI07]
Length = 408
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 184/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 67 PLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 126
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKL---- 134
DA+G + F + EGPR P+ ++ ++ L+ L Y +F ++S +R+ L
Sbjct: 127 PDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPDMASLQY---VFDAVSEIRRALVQDG 183
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL A
Sbjct: 184 RQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAVAVTDYLNA 243
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYM 252
QI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 244 QIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGLW 303
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAILD 310
L++ + ++A+G+DW+V L A ++ G V QGNLDP L + + V +L+
Sbjct: 304 LESMAEV-GADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPEAIRAQVRRVLE 361
Query: 311 VLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G +FNLGHGI+ P++V LV VR+
Sbjct: 362 DYAAGGDSDGHVFNLGHGISQFTPPESVSVLVDEVRT 398
>gi|207722146|ref|YP_002252584.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum MolK2]
gi|206587321|emb|CAQ17905.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum MolK2]
Length = 364
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 182/338 (53%), Gaps = 21/338 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PLWLMRQAGRYLPEYNATRARAGSFLSLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ ++ L P++ L Y +F ++S +R+ L
Sbjct: 83 PDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPDM-ASLQY---VFDAVSEIRRALVQG 138
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL
Sbjct: 139 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAAAVTDYLN 198
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGY 251
AQI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 199 AQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGL 258
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T ++A+G+DW+V L A ++ G V QGNLDP L + V +L
Sbjct: 259 WLESMAE-TGADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPDAIRAQVRRVL 316
Query: 310 DVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G +FNLGHGI+ P++V LV V +
Sbjct: 317 EDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHT 354
>gi|254572169|ref|XP_002493194.1| Uroporphyrinogen decarboxylase [Pichia pastoris GS115]
gi|238032992|emb|CAY71015.1| Uroporphyrinogen decarboxylase [Pichia pastoris GS115]
gi|328352791|emb|CCA39189.1| uroporphyrinogen decarboxylase [Pichia pastoris CBS 7435]
Length = 361
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 193/342 (56%), Gaps = 20/342 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY ++ K ++F + C E E+T+QPI ++
Sbjct: 12 ILRAARGEKVERPPIWIMRQAGRYLPEYHEV-KGGRDFFETCRDAEIASEITIQPITHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI A+G V+ V+ GP+ +P+ ++ L ++D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMEVKMVDKVGPQFPNPLRKPSDLDHLKKDVDV-LKELDWA 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++IS+ RKKL + L+GFCGAPWT+ YM GG K + + Y+ ++ + LL
Sbjct: 130 FKAISLTRKKLNGRVPLLGFCGAPWTLLVYMTEGGGTKMFRFAKEWIYKFTKESHQLLQQ 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP----- 238
++DV+ E+L Q+ AG ++Q+F++ G LG EF+ ++ + +I S + +
Sbjct: 190 ITDVAVEFLAQQVVAGAQMLQVFESWGGELGPDEFDEFSLPYLRQISSKLPLRLKELGIT 249
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLDPMRL 294
N FAKG+ Y L+ +L DS + + LDW S A+++ +QGNLDP +
Sbjct: 250 ENVPITVFAKGSWYALE---QLCDSGYDVVSLDWLFRPSDAVQIANGRIALQGNLDPGTM 306
Query: 295 VVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ + V+ ++ G G +I N GHG P +DP+ +
Sbjct: 307 YGSKETISKKVDKMIKGFGGGKQNYIINFGHGTHPFMDPEQI 348
>gi|300779909|ref|ZP_07089765.1| uroporphyrinogen decarboxylase [Corynebacterium genitalium ATCC
33030]
gi|300534019|gb|EFK55078.1| uroporphyrinogen decarboxylase [Corynebacterium genitalium ATCC
33030]
Length = 349
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 19/347 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G + P+W MRQAGR LPEYR R+ LD C+ PE E+T+QP+RR++
Sbjct: 11 LIAAATGRTPSRTPVWFMRQAGRSLPEYRATREGIA-MLDSCFMPELLAEITMQPVRRHD 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G +V V GP M P+ ++ P ++ + + +
Sbjct: 70 MDAAILFSDIVVPLKAAGVDVEIVPGRGPVMGSPVRSRADVDALPVLE---GDVADVAEG 126
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
ISI+ +L + LIGF GAP+T+ASY+I GG K+H + + + + ++ L+ L
Sbjct: 127 ISIILSELTDTQALIGFVGAPFTLASYLIEGGPSKNHEKTKAMMHGDPDTWHALMSKLVP 186
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+L Q+ AG+D +Q+FD+ AG L E ++ Y I++ V + P I F
Sbjct: 187 TITAFLRIQVEAGIDAMQLFDSWAGFLTEADYRRYVLPYSTEILATVAGEIPR---IHFG 243
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G +L S +G+DW VPL A E +QGNLDP L G V+ + +
Sbjct: 244 VATGELLGAMSE-AGSEVMGVDWRVPLDRAAERFTAPKVLQGNLDPALLFAGTDVVREEI 302
Query: 306 N--------AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
A+ +G IFNLGHG+ P+ DP + + V+ + E
Sbjct: 303 ARIKGEAEYAVRAGTATG-HIFNLGHGVLPETDPDAITEAVRIIHEE 348
>gi|302036575|ref|YP_003796897.1| uroporphyrinogen decarboxylase [Candidatus Nitrospira defluvii]
gi|300604639|emb|CBK40971.1| Uroporphyrinogen decarboxylase [Candidatus Nitrospira defluvii]
Length = 341
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 17/350 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN+R L+ + ++ P+W MRQAGRY+ EYR++R+K + L++C TP+ ++TL
Sbjct: 1 MNDR---FLKACRREPVDCTPVWFMRQAGRYMVEYRRLREK-HSILELCKTPDLAAQVTL 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
QPI R+ DAAI+F+DIL+ + +G ++ F E EGP + +P+ + + L D L
Sbjct: 57 QPIDRFALDAAIIFADILLPLEPMGLSLEFAEGEGPIIHNPVRDRAAVDRLKVIDDTELQ 116
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + +IS+ RK L + LIGF GAP+T+ASY I GG +++ + Y+ ++
Sbjct: 117 Y---VMDAISLTRKMLAGRVPLIGFAGAPFTLASYAIEGGSSRNYIHTKQMMYREPETWH 173
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D + V YL QI AG +Q+FD+ GCL ++ Y V I + K+
Sbjct: 174 RLMDKFARVITGYLRRQIRAGAQAVQLFDSWVGCLSAGDYAEYVVPHVQLIFEGL--KHE 231
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVG 297
I F G +LK R+ + IG+DW +P+ A + + VQGNLDP+ L
Sbjct: 232 GVPLIHFGTGTTAILKAMRQ-AGGDVIGIDWRIPIDEAWAMVGYDRAVQGNLDPVTLFGP 290
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV---LDLVKTVRS 343
+ V IL P IFNLGHGI P +NV +DLV + +
Sbjct: 291 ISEIERRVTDILQRAAGRPGHIFNLGHGILPNTPVENVAATIDLVHKLST 340
>gi|251773102|gb|EES53656.1| uroporphyrinogen decarboxylase [Leptospirillum ferrodiazotrophum]
Length = 347
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 185/332 (55%), Gaps = 12/332 (3%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
++ PPIW+MRQAGRY+PEY++IRKK +FL +C TPE + TL PI DAAILFSD
Sbjct: 21 LDRPPIWIMRQAGRYMPEYQEIRKK-TSFLGLCKTPELATQATLLPIDLLGLDAAILFSD 79
Query: 77 ILVIADALGRNVRFVENEGPR-MDPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKK 133
IL+ +A+G ++ F E++GP+ ++P+ T L P+ + + ++ ++ +
Sbjct: 80 ILIPVEAMGLSLEFTEHKGPKFLNPVRTDADIERLAVPDARKDTGF---VGDAVRLINTR 136
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L + L+GF GAP+T+A+YM+ G K+ + + + N R + L++ ++ +YL
Sbjct: 137 LDGRVPLLGFSGAPFTLATYMVEGETSKEFTKVKRLIFSNPRGYRALMEKVTRTVIDYLE 196
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
Q+ AG+ Q+FDT AG L + YA ++ A+ R I + G +L
Sbjct: 197 MQVEAGIHAYQLFDTWAGSLCAEHYREYALPYTREVVRALARH--GIPSILYINGTAALL 254
Query: 254 KNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ ++ + +DW +PL A+ + E VQGNLDP+ L+ + + V +L +
Sbjct: 255 -DLMDQAGTDVLSIDWRLPLDKAIPRISPEKAVQGNLDPVVLLTTEEALAGEVRRVLAGV 313
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G P +IFNLGHGI P+ LV+ V++
Sbjct: 314 GDRPGYIFNLGHGILPETPMAMARSLVRMVQN 345
>gi|70726129|ref|YP_253043.1| uroporphyrinogen decarboxylase [Staphylococcus haemolyticus
JCSC1435]
gi|123660534|sp|Q4L7D8|DCUP_STAHJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|68446853|dbj|BAE04437.1| uroporphyrinogen decarboxylase [Staphylococcus haemolyticus
JCSC1435]
Length = 344
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 1 MHNKNNTILQTIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTQ 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI + ++ ++P D+
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVDIKSGIGPVISNPIKSVSDVDKLTQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
Y+L Q ++ + +P LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 --PYVLETIQLLTQEKLNVP----LIGFTGAPFTLASYMIEGGPSKNYNYTKAMMYGDEA 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L VS +Y++AQ+ AG ++IQIFD+ G L ++ Y S+ ++I+ ++
Sbjct: 174 TWFALMNHLVQVSIDYVVAQVEAGAELIQIFDSWVGALNVQDYRYYIKPSMDKLINGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
KY + I F GA +++ + L + +GLDW +S A ++ +QGNLDP L+
Sbjct: 234 KY-DVPVIMFGVGASHLINEWNDLA-IDVLGLDWRTSISSATKMGVNKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ V ILD + G IFNLGHG+ P+V P +
Sbjct: 292 APWDVIEQRVREILDEGMERGKHIFNLGHGVFPEVQPDTL 331
>gi|300702527|ref|YP_003744127.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CFBP2957]
gi|299070188|emb|CBJ41479.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CFBP2957]
Length = 364
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 182/338 (53%), Gaps = 21/338 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKL--- 134
DA+G + F + EGPR P+ ++ L P++ L Y +F ++S +R+ L
Sbjct: 83 PDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPDM-ASLQY---VFDAVSEIRRALVQD 138
Query: 135 -PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL
Sbjct: 139 GRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAAAVTDYLN 198
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGY 251
AQI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 199 AQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGL 258
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAIL 309
L++ T ++A+G+DW+V L A ++ G V QGNLDP L + V +L
Sbjct: 259 WLESMAE-TGADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPDAIRAQVRRVL 316
Query: 310 DVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G +FNLGHGI+ P++V LV V +
Sbjct: 317 EDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHT 354
>gi|17548020|ref|NP_521422.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum GMI1000]
gi|24211636|sp|Q8XU90|DCUP_RALSO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17430326|emb|CAD17091.1| probable uroporphyrinogen decarboxylase (uro-d) (upd) protein
[Ralstonia solanacearum GMI1000]
Length = 364
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 183/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 23 PLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKL---- 134
DA+G + F + EGPR P+ ++ ++ L+ L Y +F ++S +R+ L
Sbjct: 83 PDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPDMASLQY---VFDAVSEIRRALVQDG 139
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL A
Sbjct: 140 RQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAAAVIDYLNA 199
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYM 252
QI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 200 QIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGLW 259
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAILD 310
L++ + T ++A+G+DW+V L A ++ G V QGNLDP L + V +L+
Sbjct: 260 LESMAQ-TGADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPDAIRAQVRRVLE 317
Query: 311 VLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G +FNLGHGI+ P++V LV V +
Sbjct: 318 DYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHT 354
>gi|225850499|ref|YP_002730733.1| uroporphyrinogen decarboxylase [Persephonella marina EX-H1]
gi|225646104|gb|ACO04290.1| uroporphyrinogen decarboxylase [Persephonella marina EX-H1]
Length = 346
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/331 (37%), Positives = 184/331 (55%), Gaps = 12/331 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRY+PEYR++R+K NF+ + +V+ T+ P + DA+I+FSDIL
Sbjct: 22 PIWLMRQAGRYMPEYRELREKAGNFVTFYKDIDLSVKATVLPRKLLGVDASIIFSDILTP 81
Query: 81 ADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+++G F E EGP ++PI T +I L P + Y+ I + ++ + L I
Sbjct: 82 LESIGVKFEFREGEGPVFLNPIETPDDILKLKPFDKNDVYYVGEIIKGVN---RALNREI 138
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
IGFCGAP+T+A+YMI G +D + + F Y AF LLD L+D+ EYL QI +
Sbjct: 139 PTIGFCGAPFTLAAYMIEGRTSRDFKKAKAFMYNYPDAFKDLLDRLADMLIEYLNFQIES 198
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYR 257
G D +QIFD+ G L ++ +A V +II ++R Y I F KG AG+ +
Sbjct: 199 GADAVQIFDSWGGYLSPDDYREFALPPVKKIIKGIKRDY--QPVIHFTKGVAGFF--DDM 254
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ ++ +DW + LS E L + QGNLDP+ L V+ + +IL+ G
Sbjct: 255 ITSGADVYSVDWMIDLSEVKEKLNGKAAAQGNLDPIVLYASKDVIREKAVSILNKWGKDT 314
Query: 317 -FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IFNLGHG+ P ++ + V LV V+ E +
Sbjct: 315 GHIFNLGHGLMPDMEVEKVKYLVDVVKKESV 345
>gi|312215395|emb|CBX95347.1| similar to uroporphyrinogen decarboxylase [Leptosphaeria maculans]
Length = 349
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 181/337 (53%), Gaps = 23/337 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY + + K +F + C +PE LTLQPI RY
Sbjct: 13 ILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP DP+ T E +L +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPDPLQTPEDKQYKEVLERKVDVAESLD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 132 Y---VYKAITLTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKLFIQTKTWVYKYPEESK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+++A + I + +
Sbjct: 189 ALLQKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTSFKSFALPYLNYIADNLPARLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDW--SVPLSFALELQKEGPVQGNLDP 291
+ FAKGA Y L + ++ N IGLDW ++ L K +QGN DP
Sbjct: 249 SKGLEPVPMTVFAKGAWYALPDLFE-SNYNTIGLDWLHDPAEAYKLARAKGKVLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGIT 326
L + + V ++ G +I NLGHG T
Sbjct: 308 GVLYGTQEAITRVVEEMVAGFDGGKQGWIANLGHGKT 344
>gi|314936113|ref|ZP_07843460.1| uroporphyrinogen decarboxylase [Staphylococcus hominis subsp.
hominis C80]
gi|313654732|gb|EFS18477.1| uroporphyrinogen decarboxylase [Staphylococcus hominis subsp.
hominis C80]
Length = 344
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 195/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+++ IL+ ++G + + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 1 MHKKNNTILQTIKGELTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSVKDVEKLTQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++I IL ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 PY-----VLETIKILTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R++ ++
Sbjct: 174 TWFALMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPFMDRLVCGIKE 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++ N I F GA +++ + L + +GLDW + A +L +QGNLDP L+
Sbjct: 234 QH-NIPVILFGVGASHLINEWNDLP-IDVLGLDWRTSILQADQLGVNKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V AILD + G IFNLGHG+ P+V P + + + V
Sbjct: 292 APWDVLEQRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHD 340
>gi|213964755|ref|ZP_03392955.1| uroporphyrinogen decarboxylase [Corynebacterium amycolatum SK46]
gi|213952948|gb|EEB64330.1| uroporphyrinogen decarboxylase [Corynebacterium amycolatum SK46]
Length = 369
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 182/373 (48%), Gaps = 39/373 (10%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R+ IL+ G + P+W MRQAGR LPEYR++RK LD C+ PE
Sbjct: 5 MNNRRTLTDAPILDAAYGRTPSRRPVWFMRQAGRSLPEYREVRKDI-GMLDSCFRPELLA 63
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QP+RR++ DAAILFSDI+V A G N+ V GP MD P+ ++ P +
Sbjct: 64 EITMQPVRRHDVDAAILFSDIVVPLKAAGVNLDVVPGRGPVMDTPVRSEADIKALPEVTE 123
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L P+ + I ++ ++L + LIGF GAP+T+ASY+I GG + H + + + +
Sbjct: 124 --EQLAPVAEGIGLILQELTDTQALIGFAGAPFTLASYLIEGGPSRHHERTKALMHSDPE 181
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ ++ + +L AQI AGVD IQ+FD+ AG L E ++ + I AV
Sbjct: 182 LWDHLMQKITPMVIAFLRAQIGAGVDAIQLFDSWAGYLTERDYRRFVLPYSKEIFQAVAD 241
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE---------------LQ 280
I F G G +L T +G+DW VPL A Q
Sbjct: 242 A--GIPRIHFGVGTGELLGAMAE-TGPEVMGVDWRVPLDVAANRIRATLSDVHRGADPAQ 298
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGVNAIL----------DVLGSGPFIFNLGHGITPQVD 330
+QGNLDP L G M + I D G IFNLGHG+ P D
Sbjct: 299 NSLALQGNLDPAILFAGEAAMTQEIQRICSEADRAIKRGDARG---HIFNLGHGVLPNTD 355
Query: 331 PKNVLDLVKTVRS 343
+ V+ + +
Sbjct: 356 ADAITRAVEIIHA 368
>gi|260906567|ref|ZP_05914889.1| uroporphyrinogen decarboxylase [Brevibacterium linens BL2]
Length = 348
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 182/344 (52%), Gaps = 13/344 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G I P+W MRQAGR LPEYR++R LD C TPE E+TLQP+RR+
Sbjct: 5 LLPALRGEQIAHTPVWFMRQAGRSLPEYRELRAG-TAMLDACRTPELVSEITLQPVRRHG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI FSDI+V A G +V V GP + +PI ++ +N +L + I +S
Sbjct: 64 VDAAIFFSDIVVPLQAAGVDVEIVPGTGPVIANPIRSRAD--VNALAELEPEQIPDIAES 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I + ++L LIGF GAP+T+ASY+I GG K+H + + + F+ LL L+
Sbjct: 122 IGRILEELGQETPLIGFAGAPFTLASYLIEGGPSKNHEKTKSLMASDPETFSLLLSKLAR 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S+ +L Q+ AG Q+FD+ AG L ++E + + ++R I F
Sbjct: 182 ISSTFLDVQLGAGASAFQLFDSWAGYLSRRDYEAHVVEHSSAVFESLRHH--EVPSIHFG 239
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G +L + R S A+G+D+ V L A +Q P+QGNLDP L + + +
Sbjct: 240 VQTGELLTSMSR-AGSTAVGVDFRVDLDDASTRVQPGQPLQGNLDPALLFAPWEALAPRI 298
Query: 306 NAILD--VLGSGPFIFNLGHGITPQVDPK---NVLDLVKTVRSE 344
I+ + F+FNLGHG+ P DP ++D V V +E
Sbjct: 299 EEIVKQGLNHEAGFVFNLGHGVLPYTDPDVPGRIVDEVHRVSAE 342
>gi|240169727|ref|ZP_04748386.1| uroporphyrinogen decarboxylase [Mycobacterium kansasii ATCC 12478]
Length = 357
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 178/335 (53%), Gaps = 19/335 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R++ + LD C P+ E+TLQP+RRY DAAILFSDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRALRQQ-HSMLDACLEPDVACEITLQPVRRYGVDAAILFSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G + V + GP + P+ T +I + P L + P+ Q++ +L L +
Sbjct: 88 LRAAGVELDIVADVGPVIAHPVRTATDIEHIKP---LDPQAIQPVLQTVELLVAAL-GDV 143
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + + + + +++ L+ L+D++ +L QI +
Sbjct: 144 PLIGFAGAPFTLASYLIEGGPSRHYIRTKAMMLAEPASWHALMSKLTDLTIAFLRGQIDS 203
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD IQ+FD+ AG L ++ Y R+ + F G +L
Sbjct: 204 GVDAIQVFDSWAGMLSLSDYRQYVLPHSARVFGTLAEH--GVPMTHFGVGTAELLGAMSE 261
Query: 259 LTDSNA---IGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD---- 310
+ A +G+DW L+ A +Q +QGNLDP+ L+ G V+ A++D
Sbjct: 262 ALQAGAATVVGVDWRTALADAAARVQPGTALQGNLDPVLLLAGWPVVERAARAVVDDGRR 321
Query: 311 --VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +FNLGHG+ PQ DP + +LV V S
Sbjct: 322 AVDAGAAGHVFNLGHGVLPQTDPGVLTELVSLVHS 356
>gi|299065211|emb|CBJ36377.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CMR15]
Length = 403
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 182/337 (54%), Gaps = 19/337 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+ RY DAAILFSDIL +
Sbjct: 62 PLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLDRYPLDAAILFSDILTV 121
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKL---- 134
DA+G + F + EGPR P+ ++ ++ L+ L Y +F ++S +R+ L
Sbjct: 122 PDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPDMASLQY---VFDAVSEIRRALVQDG 178
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A YM+ GG D + Y + +L+ + +YL A
Sbjct: 179 RQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHRILEINAAAVIDYLNA 238
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYM 252
QI AG + +FDT G L + ++ ++ + R++ +R + I F KG G
Sbjct: 239 QIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADGQRVPVILFTKGGGLW 298
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAILD 310
L++ T ++A+G+DW+V L A ++ G V QGNLDP L + V +L+
Sbjct: 299 LESMAE-TGADALGVDWTVNLQLA-RVRTGGRVALQGNLDPTVLFAEPDAIRAQVRRVLE 356
Query: 311 VLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G +FNLGHGI+ P++V LV V +
Sbjct: 357 DYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHT 393
>gi|91215568|ref|ZP_01252539.1| uroporphyrinogen decarboxylase [Psychroflexus torquis ATCC 700755]
gi|91186520|gb|EAS72892.1| uroporphyrinogen decarboxylase [Psychroflexus torquis ATCC 700755]
Length = 340
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 192/341 (56%), Gaps = 12/341 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + PP+W+MRQAGRYLP++ +++ K+ +F C T E E+T+ PI +
Sbjct: 8 LKALRGETVERPPVWMMRQAGRYLPDFMKLKAKY-DFFTRCRTSELATEITVMPIHQVGT 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V+ N GP + +PI ++ ++ P++ L Y +++
Sbjct: 67 DAAILFSDILVVPQAMNIEVQMKPNFGPWLPNPIRDRKSLDQVIVPDVYEELGY---VYE 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +K+L + + LIGF G+PWT+ Y + G K+ + + F + + + LL ++
Sbjct: 124 AIKMTKKELNDEVPLIGFAGSPWTIFCYCVQGQGSKNFDKAKEFCFTEPQMAHELLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGVD +Q+FD+ G L +++ ++ + +II A++ P I+F
Sbjct: 184 DTTIAYLKGKVEAGVDAVQVFDSWGGMLSPVDYQEFSWPYIQQIIDALKDMIP---VIAF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KG + L + + ++A+G+DW+ A L +QGN DP RL + +
Sbjct: 241 GKGCWFALDVMAK-SGASALGVDWTCSGRNARYLSGGNITLQGNFDPSRLFSPPKDIKRM 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++D G +I NLGHGI P + +N V+ V+ K
Sbjct: 300 VHEMIDEFGKDRYIVNLGHGILPNIPVENAKAFVEAVKEYK 340
>gi|289617056|emb|CBI56124.1| unnamed protein product [Sordaria macrospora]
Length = 369
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 25/347 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F ++C PE LTLQPI RY
Sbjct: 13 LLRAARGETVERPPIWVMRQAGRYLPEYHEA-KGGRDFFEVCRDPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP DP+ + Q L+ ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPDPLRSPSDGQYAELMKRDVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ RKKL + L GF GAPWT+ YM+ GG K + + + Y+
Sbjct: 132 Y---VYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKEVKTWIYKYPEETK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL +S++ EYL Q+ AG +IQ+FD+ AG L F+ ++A + I + +
Sbjct: 189 ALLQKISELCVEYLALQVKAGAQIIQVFDSWAGELSPSSFKEFSAPYLTYIAKHLPLRLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDP 291
+ F KGA Y L + N +GLDW + A+++ + P +QGN DP
Sbjct: 249 EMGLEPVPMVVFPKGAWYALDAACDM-GYNVVGLDWLHDPAEAVKIVGDRPMVIQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAIL---DVLGSGP-FIFNLGHGITPQVDPKNV 334
L ++ + V ++ D G +I NLGHGITP V+P ++
Sbjct: 308 GVLYGSHEAITKVVEEMVRGFDWHGRHKGWIVNLGHGITPFVNPDDL 354
>gi|254821718|ref|ZP_05226719.1| uroporphyrinogen decarboxylase [Mycobacterium intracellulare ATCC
13950]
Length = 357
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 182/332 (54%), Gaps = 17/332 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+RR++ DAAILFSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVRRHDVDAAILFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP ++ P+ T ++ + P L + + PI ++S+L L + +
Sbjct: 92 LLGAGIDLDIVAGVGPVIESPVRTAADVAAIKP---LERHRVQPISDAVSLLVSALGD-V 147
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + + +++ L++ L+D++ +L Q+ A
Sbjct: 148 PLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEKLTDITVGFLRVQLDA 207
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD IQ+FD+ AG L + Y RI +A+ F G +L
Sbjct: 208 GVDAIQVFDSWAGTLSLANYRAYVQPHSARIFAALAEY--GVPMTHFGVGTAELLGAMSE 265
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD------V 311
+ + +G+DW L+ A + G +QGNLDP+ L+ G V+ A++D
Sbjct: 266 V-GATVVGVDWRTSLADAAARVEPGTALQGNLDPVVLLAGWPVVERAARAVVDDGRRAVD 324
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +FNLGHG+ P+ DP + DLV V S
Sbjct: 325 AGAAGHVFNLGHGVLPETDPAVLTDLVSLVHS 356
>gi|50289463|ref|XP_447163.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526472|emb|CAG60096.1| unnamed protein product [Candida glabrata]
Length = 360
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 190/345 (55%), Gaps = 25/345 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP WLMRQAGRYLPEY +++ ++F ++C E E+T+QP+RRY
Sbjct: 10 ILRAARGEAVERPPCWLMRQAGRYLPEYHEVKGN-RDFFEVCRDAEVASEITIQPVRRYA 68
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF--LNYL 120
DAAI+FSDILVI A+G V VE +GP +P+ T E +L+ +D+ LN+
Sbjct: 69 GLLDAAIIFSDILVIPQAMGMKVEMVEGKGPHFPEPLRTSEDLQKVLDYKVDIKKELNW- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F++I++ RKKL + L GFCGAPWT+ YM GG + + + + + L
Sbjct: 128 --AFEAITLTRKKLDGQVPLFGFCGAPWTLLVYMTEGGGSRLFRFAKQWINEKPEESHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I + V ++
Sbjct: 186 LQAITDVAVEFLAQQVVAGAQILQVFESWGGELSAGDFDEFSLPYLRQIATKVPKRLKEL 245
Query: 238 ---PNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNLDP 291
+ I FAKG+ Y L +L DS N + LDW A+++ V QGNLDP
Sbjct: 246 GVEEHIPMIVFAKGSWYALD---KLCDSGYNVVSLDWCWDPKEAVKINNNRVVLQGNLDP 302
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ ++++ +++ G G +I N GHG P +D + +
Sbjct: 303 GVMYGSDEIISKKTKTMIEGFGGGKKNYIVNFGHGTHPFMDTEKI 347
>gi|319948478|ref|ZP_08022612.1| uroporphyrinogen decarboxylase [Dietzia cinnamea P4]
gi|319437845|gb|EFV92831.1| uroporphyrinogen decarboxylase [Dietzia cinnamea P4]
Length = 377
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 179/345 (51%), Gaps = 23/345 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ + G + P+W MRQAGR LPEY+++R L+ C+ PE T E+TLQP+RR+
Sbjct: 38 LDEVTGRGGSHTPVWFMRQAGRSLPEYKEVRGD-STMLEACFDPEMTCEITLQPVRRHGV 96
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI FSDI++ A G ++ V GP + +PI + P +L + L I +++
Sbjct: 97 DAAIFFSDIVIPLAAAGVDIDIVPGTGPVVAEPIRDESDVAALP--ELTPDRLEAIEEAV 154
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++ +L + LIGF GAP+T+ASY+I GG ++H + Y +N L+ L+D+
Sbjct: 155 RLITAELDPAVALIGFAGAPFTLASYLIEGGPSRNHEHTKSLMYSRPEVWNELMAKLADL 214
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI-----ISAVRRKYPNAKF 242
+ +L AQ+ AGVD IQ+FD+ AG L E ++ + RI IS+V R +
Sbjct: 215 TTVFLRAQVGAGVDAIQLFDSWAGALTERDYRSLVLPHSTRIFSDEVISSVPRTH----- 269
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L +G+DW +PL A +QGNLDP L +
Sbjct: 270 --FGVGTGELLGAMGE-AGPEVVGVDWRIPLDDAATRVPGKVLQGNLDPAMLFADRSALD 326
Query: 303 DGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V IL+ G+ +FNLGHG+ P D V +V V
Sbjct: 327 GEVRRILEEGRRAREAGAAGHVFNLGHGVLPATDAGAVTHVVDLV 371
>gi|163785222|ref|ZP_02179898.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879510|gb|EDP73338.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 195/348 (56%), Gaps = 18/348 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++ I P+WLMRQAGRY+PEYR++RK +F E +V+ ++ P +
Sbjct: 9 LLRAIKKEPIERTPVWLMRQAGRYMPEYRELRKTAGDFKSFYKNVELSVKASVLPYKLLG 68
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
DA I+FSDIL + +G N F E EGP ++PI + E I L P + Y+ I +
Sbjct: 69 VDATIIFSDILTPLEPMGFNFEFREGEGPVFLEPIKSPEDINKLRPLNVEDVKYVGEIIK 128
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++L I IGFCGAP+T+A+YMI G +D + + F Y N R F LLD L+
Sbjct: 129 GVN---EELDRAIPTIGFCGAPFTLAAYMIEGRTSRDFKKAKAFMYDNPRDFKKLLDKLA 185
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D +YL QI +G D +QIFD+ AG L +++ +A V +II ++ +P I F
Sbjct: 186 DSLIDYLSFQIESGADTVQIFDSWAGHLSPDDYKEFALPPVKKIIKKLKEIHPEIPIIHF 245
Query: 246 AKG-AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMID 303
KG AG++ +Y + ++ +DW + L E + VQGNLDP+ L V+ +
Sbjct: 246 TKGVAGFL--DYMITSGADVYSVDWMIDLKVVKEKAFPKSAVQGNLDPIVLYASKDVIRE 303
Query: 304 GVNAILDVLG-----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
I+++LG SG +FNLGHG+ P ++ + V LV+TV+ E +
Sbjct: 304 ---KIINLLGKWEKDSG-HVFNLGHGLMPDMEFEKVKYLVETVKKESV 347
>gi|315195745|gb|EFU26132.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 344
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 194/340 (57%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 1 MHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 60 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 174 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 234 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + + ILD + +G IFNLGHG+ P+V P+ +
Sbjct: 292 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETL 331
>gi|326481254|gb|EGE05264.1| uroporphyrinogen decarboxylase [Trichophyton equinum CBS 127.97]
Length = 364
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 187/347 (53%), Gaps = 28/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI RY+
Sbjct: 13 LLRAARGQTVERPPIWIMRQAGRYLPEYHEAKGN-RDFFECCRSPEVASTLTLQPIERYS 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P+ T E +LN +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRAVDVTKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL +S+V E+L Q+ AG ++Q+FD+ AG L F +++ + R +SA K
Sbjct: 189 KLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFADFSMPYL-RYVSANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNL 289
FAKGA Y L L +S N +GLDW + A + V QGN
Sbjct: 248 QEMGLEAVPMTVFAKGAWYALDE---LCESGYNVVGLDWQHDPAKARAVANGRVVLQGNA 304
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
DP L + + V ++ G G +I NLGHG+TP V P ++
Sbjct: 305 DPGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDL 351
>gi|22298283|ref|NP_681530.1| uroporphyrinogen decarboxylase [Thermosynechococcus elongatus BP-1]
gi|29611755|sp|Q8DKW0|DCUP_THEEB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|22294462|dbj|BAC08292.1| uroporphyrinogen decarboxylase [Thermosynechococcus elongatus BP-1]
Length = 343
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 188/341 (55%), Gaps = 11/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIWLMRQAGRY+ YR +R ++ +F PE +E++LQP R +
Sbjct: 6 LLRAARGESVERPPIWLMRQAGRYMKVYRDLRDRYPSFRQRSEIPELAIEISLQPFRAFA 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D ILFSDIL +G VE++GP +DP T +++ L+P + ++ PI
Sbjct: 66 PDGVILFSDILTPLPGIGIPFDIVESKGPIIDPPIRTLEQVQHLHPLEPEAACPFIRPI- 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ LR+++ + ++GF GAPWT+A+Y I G KD+ Q + AY+ + L+ L
Sbjct: 125 --LATLRQEVGDRAAVLGFAGAPWTLAAYAIEGKSSKDYIQIKTMAYREPDLLHKFLNHL 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A+YL QI G V+Q+FD+ AG L +++ +A ++I V+ YP+ I
Sbjct: 183 ATAIADYLCYQIDCGAQVVQLFDSWAGQLSRQDYDTFAFPYQKQVIQQVKAVYPDVPIIL 242
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ ++ + T + + LDW+V L + + +QGNLDP+ L V+ +
Sbjct: 243 YINGSAAIV-DRMAATGVDIVSLDWTVDLGTIRQQFPPSVGLQGNLDPVILFAPQPVLKE 301
Query: 304 GVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
AI++ G +IFNLGHG+ TP+ + + D VK++
Sbjct: 302 RSLAIIEAGRKGKYIFNLGHGVLQGTPEENVAFLFDWVKSL 342
>gi|171462855|ref|YP_001796968.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192393|gb|ACB43354.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 347
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 176/339 (51%), Gaps = 25/339 (7%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL I DA+
Sbjct: 1 MRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTIPDAM 60
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL----PNHIT 139
G ++F EGP + P+ T+E D ++ L +F ++S +RK L +
Sbjct: 61 GLGLKFTAGEGPSFECPLRTEEAIKKLRLAD--MDQLKYVFDAVSEIRKALIQDGKQRVP 118
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A YMI G D + + +LD + A YLI Q+ AG
Sbjct: 119 LIGFSGSPWTLACYMIDGSSADDFRHAKTMMFSRPDLMQHILDINAQSVAAYLIEQVKAG 178
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYR 257
+ IFDT G L + ++ + S+ ++I+ + R++ K I F KG L +
Sbjct: 179 AQALMIFDTWGGMLPDGWYQKMSLASMQKVIAMLPREHEGRKIPVILFTKGGAIWLNDMA 238
Query: 258 RLTDSNAIGLDWSVPLSFA----LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ ++ I LDW++ LS A L + K +QGNLDP+ L + + + N +L+ L
Sbjct: 239 Q-AGADVIALDWTMSLSRARKQLLAIDKPLALQGNLDPLILFAEPKRITEQANLLLEDLA 297
Query: 314 SGPF-----------IFNLGHGITPQVDPKNVLDLVKTV 341
S P +FNLGHG + P++V L + V
Sbjct: 298 SAPVLKSGLHPLDGHVFNLGHGTSQFTPPESVTALAEAV 336
>gi|304570543|ref|YP_265770.2| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 333
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 186/338 (55%), Gaps = 11/338 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I E + N PIWLMRQAGRYLPE+R+IRK +F+++C + E+TLQP++R++
Sbjct: 4 IQETIINKKTNNSPIWLMRQAGRYLPEFREIRKLNPDFINLCLNENLSSEITLQPLKRFD 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDIL+I L + V+F +N GP++ + ++I ++ ID F+ L P+++SI
Sbjct: 64 LDAAIIFSDILMIPYGLNQEVKFEKNFGPKLGLLDLEKISKID-EID-FVEKLYPVYKSI 121
Query: 128 -SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L + LIGF GAPWT+ YMI+ K F ++ N +L L
Sbjct: 122 KKVSEDNLIKNKNLIGFVGAPWTLLVYMINKHSPKKELVKDFF--KDEFLINRVLIILEK 179
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ QI G VIQIFD+ AG L E + NY +++ ++ N I F
Sbjct: 180 FLKLHIDQQIKNGATVIQIFDSWAGLLEEKDLPNYVYVPTLNLVNYIKSL--NIPVICFP 237
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+G KNY + +A+ +D+ V P+S E++ PVQG LDP L+ + +
Sbjct: 238 RGIKNY-KNYCDIVKPDAVNIDYDVDPVSACKEIK--IPVQGGLDPKILLTDKENLKKET 294
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ P+IFNLGHG+ P+ +P V LVK V+
Sbjct: 295 LKYLNTFKDHPYIFNLGHGVLPETNPNMVEYLVKIVKD 332
>gi|62389335|ref|YP_224737.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum ATCC
13032]
gi|23813976|sp|Q8NT75|DCUP_CORGL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21323200|dbj|BAB97828.1| Uroporphyrinogen-III decarboxylase [Corynebacterium glutamicum ATCC
13032]
gi|41324669|emb|CAF19151.1| UROPORPHYRINOGEN DECARBOXYLASE [Corynebacterium glutamicum ATCC
13032]
Length = 358
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 183/349 (52%), Gaps = 21/349 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQP+RR++
Sbjct: 18 IIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQPVRRHD 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G V V GP +D P+ ++ L N+ + + + Q
Sbjct: 77 VDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSRGDVL---NLPILEGNVPEVEQG 133
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L+ L
Sbjct: 134 IGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHALMARLVP 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
L +QI AG+D +Q+FD+ AG L E ++ + I+ V + + P I F
Sbjct: 194 TIVNSLKSQIDAGIDAVQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKYQLPR---IHF 250
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGP--VQGNLDPMRLVVGNQVM 301
G G +L + S +G+DW VPL A E GP +QGNLDP L G +
Sbjct: 251 GVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGRAPL 309
Query: 302 IDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I +D + IFNLGHG+ P +++ + V + S
Sbjct: 310 TKEIERIKAEAQTAVDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 358
>gi|329911645|ref|ZP_08275585.1| Uroporphyrinogen III decarboxylase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545825|gb|EGF30945.1| Uroporphyrinogen III decarboxylase [Oxalobacteraceae bacterium
IMCC9480]
Length = 359
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 176/330 (53%), Gaps = 9/330 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR R + +FL + P+Y E+TLQP+ R+ DAAILFSDIL +
Sbjct: 26 PVWLMRQAGRYLPEYRATRARAGSFLGLAKNPDYATEVTLQPLDRFPLDAAILFSDILTV 85
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DA+G + F + EGP+ + E ++ + L L ++ +++ +R +L + L
Sbjct: 86 PDAMGLGLYFADGEGPKFERPLRDEAAVMALQVP-DLGDLQYVYDAVTQIRTELDGRVPL 144
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G+PWT+A YM+ GG D + + Y + +L + A YL AQI AG
Sbjct: 145 IGFSGSPWTLACYMVEGGGSDDFRRVKSMLYDRPDLMHRILSINATAVAGYLNAQIAAGA 204
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRR 258
+ IFD+ G L + ++ ++ + +++ + + I F KG G L
Sbjct: 205 QAVMIFDSWGGALADGAYQKFSLDYMREVVAQLHLDQEGGRVPCIVFTKGGGLWLDQIAD 264
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
+ ++A+GLDW+V L A ++ + +QGNLDP+ L + + V + L G+
Sbjct: 265 IG-ADAVGLDWTVNLGRARTQVGHKVALQGNLDPVALFAKPEQIHAEVASALASYGAPSE 323
Query: 317 ---FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI+ P V +V V S
Sbjct: 324 GHGHVFNLGHGISQFTQPDAVAVMVDAVHS 353
>gi|322785863|gb|EFZ12482.1| hypothetical protein SINV_10627 [Solenopsis invicta]
Length = 326
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 178/331 (53%), Gaps = 18/331 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE++++R + +F +C TP ++TLQPI R+ DA+I+FSDILVI A+
Sbjct: 1 MRQAGRYLPEFQKVRAQ-HDFFSVCQTPALACQVTLQPIERFELDASIIFSDILVIPQAM 59
Query: 85 GRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP + DP + L+ PN++ L Y + +I++ R KL +
Sbjct: 60 GLKVEMVPGVGPVLPQPLADP--SDLTRLVRPNVNEALKY---VGDAITLTRHKLDGRVP 114
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAPWT+ YMI GG + R + Y+ + LL ++D+ +YL+ Q+ AG
Sbjct: 115 LIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDTHKLLQMITDIIVDYLVMQVKAG 174
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PNAKFISFAKGAGY-ML 253
++Q+F+++ L + F NY+ + + +I VR++ P I+F KGA L
Sbjct: 175 AQLLQVFESNGDYLDDALFTNYSFKYLKQISDRVRKQLKEENIPEVPMIAFPKGATMNSL 234
Query: 254 KNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
K + IGLDW+V P+ +L +QGN+DP + ++D ++
Sbjct: 235 KILAKDQSYEVIGLDWTVDPIEARNQLGPNITLQGNMDPCAMYSPQDKIVDRAQKMVSDF 294
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +I NLGHGI P ++ +K + S
Sbjct: 295 GKTRYIANLGHGILPDTPITSMEAFIKGIHS 325
>gi|326476105|gb|EGE00115.1| uroporphyrinogen decarboxylase [Trichophyton tonsurans CBS 112818]
Length = 364
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 187/347 (53%), Gaps = 28/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI RY+
Sbjct: 13 LLRAARGQTVERPPIWIMRQAGRYLPEYHEAKGN-RDFFECCRSPEVASTLTLQPIERYS 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P+ T E +LN +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRAVDVTKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL +S+V E+L Q+ AG ++Q+FD+ AG L F +++ + R +SA K
Sbjct: 189 KLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFADFSLPYL-RYVSANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNL 289
FAKGA Y L L +S N +GLDW + A + V QGN
Sbjct: 248 QEMGLEAVPMTVFAKGAWYALDE---LCESGYNVVGLDWQHDPAKARAVANGRVVLQGNA 304
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
DP L + + V ++ G G +I NLGHG+TP V P ++
Sbjct: 305 DPGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDL 351
>gi|258423111|ref|ZP_05686005.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9635]
gi|257846675|gb|EEV70695.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9635]
Length = 345
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 198/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T ++I ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKISQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|158339423|ref|YP_001520600.1| uroporphyrinogen decarboxylase [Acaryochloris marina MBIC11017]
gi|158309664|gb|ABW31281.1| uroporphyrinogen decarboxylase [Acaryochloris marina MBIC11017]
Length = 355
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 188/343 (54%), Gaps = 14/343 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F + PE +E++LQP R +
Sbjct: 10 RLLRAARGEVLDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEISLQPWRAF 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDI+ +G + E +GP + +PI T E +N DL + LP I
Sbjct: 70 KPDGVILFSDIVTPLPGIGIKMDVAEGKGPIIEEPIRTME--QVNNLHDLEPDESLPFIR 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q ++ LR+++ N T++GF GAPWT+A+Y I G K + + A+ + + L+ +
Sbjct: 128 QILTALRQEVGNQSTVLGFVGAPWTLAAYAIEGKGSKHYSVIKGMAFDDPTILHAFLEKI 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
SD A Y+ QI G V+Q+FD+ AG L +FE +A R+ V+ +P+ I
Sbjct: 188 SDAIATYVRHQIDCGAQVVQMFDSWAGQLSPIDFETFALPYQQRVFRQVKETHPDTPLIL 247
Query: 245 FAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQ 299
A G+ +L+ R+ S A I +DW+V ++ A ++ GP VQGN+DP L
Sbjct: 248 LASGSAGLLE---RMAQSGADIISVDWTVDMADA--RKRLGPNLHVQGNMDPGVLFGSQD 302
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D + + G+ I NLGHGI P +N +TV+
Sbjct: 303 FIRDRILDTIRKAGNKGHIMNLGHGILPTTPEENAAFFFETVK 345
>gi|227832134|ref|YP_002833841.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
gi|227453150|gb|ACP31903.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
Length = 349
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 16/345 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G+ + PP+W MRQAGR LPEYR++R+ + LD C+ PE E+TLQP+RR++
Sbjct: 12 LIAAATGHTPSRPPVWFMRQAGRSLPEYRKVREGI-SMLDSCFMPELLAEITLQPVRRHD 70
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D AILFSDI+V A G V V GP MD P+ T+E P +D+ + + Q
Sbjct: 71 VDGAILFSDIVVPLKAAGVGVEIVPGRGPVMDAPVRTKEDVANLPILDVDVPE---VRQG 127
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+ +L + LIGF GAP+T+ASY+I GG K+H + + + + ++ L++ L+
Sbjct: 128 IEIILNELTDKQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHSDPDTWHRLMERLTP 187
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+L Q+ AG+D +Q+FD+ AG L E ++ + +I+ + P I F
Sbjct: 188 TIISFLELQLDAGIDAMQLFDSWAGYLNERDYREFVLPYSEQILKVAEGRVPR---IHFG 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G G +L S +G+D+ V + A +QGNLDP L G + V
Sbjct: 245 VGTGELLGAMSE-AGSEVMGVDYRVSMDAAAARVNADILQGNLDPALLFAGEDAVRKEVR 303
Query: 307 AILDVLGSG-------PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
AI + + I+NLGHG+ P + + V V + E
Sbjct: 304 AIKAEVDAARAAGNLRGHIWNLGHGVLPTTEAEAVTRAVAIIHEE 348
>gi|114556206|ref|XP_001154586.1| PREDICTED: uroporphyrinogen decarboxylase isoform 5 [Pan
troglodytes]
Length = 341
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 165/298 (55%), Gaps = 9/298 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA---RSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCAL 310
>gi|295672788|ref|XP_002796940.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb01]
gi|226282312|gb|EEH37878.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb01]
Length = 365
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 27/347 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G I PPIW+MRQAGRYLPEY +++ + +F C +PE LTLQP+ RY+
Sbjct: 13 LLRAARGEKIERPPIWVMRQAGRYLPEYHKVKGQ-HDFFACCRSPEIASTLTLQPVERYS 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LN 118
DAAI+FSDILV+ A+G V ++ +GP P+ T Q LL+ ID+ L+
Sbjct: 72 GLIDAAIIFSDILVVPQAMGMTVEMIDKKGPSFPSPLKTPSDPQYQQLLDKQIDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPAASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ E+L Q+ AG ++Q+FD+ AG L F ++ + I + ++
Sbjct: 189 VLLQKIAEICVEHLALQVEAGAQLVQVFDSWAGELSPASFAEFSLPYLRYISVHLPKRLA 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L L +S + + LDW + A+++ K +QGN D
Sbjct: 249 EMGQERVPMTVFAKGAWYALDV---LCESGYDVVSLDWLQDPAEAVKVAKGRVTLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
P L + + V ++ G +I NLGHG+TP VDP+++
Sbjct: 306 PGCLYGSREAITAVVENMVKGFWDGRRQGWIANLGHGVTPFVDPEDL 352
>gi|312112120|ref|YP_003990436.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y4.1MC1]
gi|311217221|gb|ADP75825.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y4.1MC1]
Length = 345
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 190/336 (56%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +YN
Sbjct: 10 LRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYNV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ Y+L
Sbjct: 69 DAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVERLGEIHPEEDV--PYVL-- 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 -ETIKLLTTEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQI AG D IQIFD+ G + ++ + ++ RI +A+R + N I
Sbjct: 183 LADMTIRYVKAQIRAGADAIQIFDSWVGAVSVDDYRTFIKPTMARIFAALREE--NVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + IGLDW + L A E +QGNLDP L+ +V+
Sbjct: 241 MFGVGASHLAKEWNDLP-LDVIGLDWRLSLREARESGITKALQGNLDPAVLLAPWEVIEK 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P ++FNLGHGI P++ P+ + L
Sbjct: 300 RVKQILDEGMERPGYVFNLGHGIFPEIRPETLKRLT 335
>gi|262184015|ref|ZP_06043436.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
Length = 346
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 16/345 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G+ + PP+W MRQAGR LPEYR++R+ + LD C+ PE E+TLQP+RR++
Sbjct: 9 LIAAATGHTPSRPPVWFMRQAGRSLPEYRKVREGI-SMLDSCFMPELLAEITLQPVRRHD 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D AILFSDI+V A G V V GP MD P+ T+E P +D+ + + Q
Sbjct: 68 VDGAILFSDIVVPLKAAGVGVEIVPGRGPVMDAPVRTKEDVANLPILDVDVPE---VRQG 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+ +L + LIGF GAP+T+ASY+I GG K+H + + + + ++ L++ L+
Sbjct: 125 IEIILNELTDKQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHSDPDTWHRLMERLTP 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+L Q+ AG+D +Q+FD+ AG L E ++ + +I+ + P I F
Sbjct: 185 TIISFLELQLDAGIDAMQLFDSWAGYLNERDYREFVLPYSEQILKVAEGRVPR---IHFG 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G G +L S +G+D+ V + A +QGNLDP L G + V
Sbjct: 242 VGTGELLGAMSE-AGSEVMGVDYRVSMDAAAARVNADILQGNLDPALLFAGEDAVRKEVR 300
Query: 307 AILDVLGSG-------PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
AI + + I+NLGHG+ P + + V V + E
Sbjct: 301 AIKAEVDAARAAGNLRGHIWNLGHGVLPTTEAEAVTRAVAIIHEE 345
>gi|19551680|ref|NP_599682.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum ATCC
13032]
Length = 374
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 183/349 (52%), Gaps = 21/349 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQP+RR++
Sbjct: 34 IIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQPVRRHD 92
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G V V GP +D P+ ++ L N+ + + + Q
Sbjct: 93 VDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSRGDVL---NLPILEGNVPEVEQG 149
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L+ L
Sbjct: 150 IGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHALMARLVP 209
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
L +QI AG+D +Q+FD+ AG L E ++ + I+ V + + P I F
Sbjct: 210 TIVNSLKSQIDAGIDAVQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKYQLPR---IHF 266
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGP--VQGNLDPMRLVVGNQVM 301
G G +L + S +G+DW VPL A E GP +QGNLDP L G +
Sbjct: 267 GVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGRAPL 325
Query: 302 IDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I +D + IFNLGHG+ P +++ + V + S
Sbjct: 326 TKEIERIKAEAQTAVDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 374
>gi|327296826|ref|XP_003233107.1| uroporphyrinogen decarboxylase [Trichophyton rubrum CBS 118892]
gi|326464413|gb|EGD89866.1| uroporphyrinogen decarboxylase [Trichophyton rubrum CBS 118892]
Length = 364
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 185/347 (53%), Gaps = 28/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGQTVERPPIWIMRQAGRYLPEYHEAKGN-RDFFECCRSPEVASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P+ T E +L+ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLSRTVDVTKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 132 Y---VYKAITLTRQKLEGRVPLIGFTGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-- 236
LL +S+V E+L Q+ AG +IQ+FD+ AG L F ++ + R +SA K
Sbjct: 189 NLLQKISEVCVEHLAQQVKAGAQMIQVFDSWAGELSPRSFAEFSLPYL-RFVSANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNL 289
FAKGA Y L L +S N +GLDW + A + V QGN
Sbjct: 248 QEMGLEAVPMTVFAKGAWYALDE---LCESGYNVVGLDWQHDAAKARAVANGRVVLQGNA 304
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
DP L + + V ++ G G +I NLGHG+TP V P ++
Sbjct: 305 DPGCLYGAREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDL 351
>gi|226366252|ref|YP_002784035.1| uroporphyrinogen decarboxylase [Rhodococcus opacus B4]
gi|254767703|sp|C1B4A1|DCUP_RHOOB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226244742|dbj|BAH55090.1| uroporphyrinogen decarboxylase [Rhodococcus opacus B4]
Length = 355
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 182/347 (52%), Gaps = 21/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+RR+
Sbjct: 18 LLAAAEGRAPGRRPVWFMRQAGRSLPEYREIRSGI-GMLESCFDPALVCEITMQPVRRHG 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +P+ + P L + + Q+
Sbjct: 77 VDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAVAQA 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL L+D
Sbjct: 135 VQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPKTWHALLGTLAD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
+ +L AQ+ AGVD IQ+FD+ AG L E+ + R+ + V K P I F
Sbjct: 194 TTITFLQAQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEVESAKVPR---IHF 250
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
G G +L ++ +G+DW +PL A ++ GP +QGNLDP L G+ +
Sbjct: 251 GVGTGELLGAMGE-AGADVVGVDWRIPLDVA--ARRVGPGKALQGNLDPAVLFAGSAAVE 307
Query: 303 DGVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + IFNLGHG+ P DP + LV+ V S
Sbjct: 308 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 354
>gi|228475900|ref|ZP_04060610.1| uroporphyrinogen decarboxylase [Staphylococcus hominis SK119]
gi|228270055|gb|EEK11525.1| uroporphyrinogen decarboxylase [Staphylococcus hominis SK119]
Length = 345
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 195/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++++ IL+ ++G + + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHKKNNTILQTIKGELTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 61 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSVKDVEKLTQIDPKRDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++I IL ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 121 PY-----VLETIKILTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEE 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R++ ++
Sbjct: 175 TWFALMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPFMDRLVCGIKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++ N I F GA +++ + L + +GLDW + A +L +QGNLDP L+
Sbjct: 235 QH-NIPVILFGVGASHLINEWNDLP-IDVLGLDWRTSILQADQLGVNKTLQGNLDPSLLL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V AILD + G IFNLGHG+ P+V P + + + V
Sbjct: 293 APWDVLEQRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHD 341
>gi|328850729|gb|EGF99890.1| hypothetical protein MELLADRAFT_50583 [Melampsora larici-populina
98AG31]
Length = 379
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 194/360 (53%), Gaps = 27/360 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPE+R++R+ +F ++C TP E+T+QPI+RY
Sbjct: 16 LIRAASGKPTERSPVWVMRQAGRYLPEFRKLRESH-DFFEICRTPTLATEITMQPIKRYK 74
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIY-LLNPNIDL--FLNYL 120
DAAI+FSDILVI AL ++ + GP +PI T QE+ ++N ID + L
Sbjct: 75 GLLDAAIIFSDILVIPQAL--DMEVIMKPGPIFPNPIQTNQEMKDMINKPIDEIELKSKL 132
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I + + L N I LIGF GAPWT+ +YM SGG + + ++ L
Sbjct: 133 QYVYDAIELTVEALDNEIPLIGFVGAPWTLFAYMTSGGSATSFDTAKKWLFEEPELSIQL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR---SVGRIISA--VRR 235
L+ LS V + +L+ QI +G VIQ+FD+ AG L ++F+ ++ VG+++ ++
Sbjct: 193 LEKLSIVCSIHLLLQIKSGCQVIQVFDSWAGELNSYDFKKFSLPFLIQVGKLVKEGLIKE 252
Query: 236 KYPNAKFISFAKGAGY--MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP----VQGNL 289
P I FAKGA LK+ +D IGLDW + FA++ + +QGNL
Sbjct: 253 NLPIVPMIVFAKGANQSNQLKSLSE-SDYTTIGLDWKIEPEFAIKSLESNSTKIALQGNL 311
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSG-----PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
DP L + V + D G P I NLGHGITP VDP+ + ++ V E
Sbjct: 312 DPAILHSSPDSIKRYVKLMFDKSNGGFRGDLPHIANLGHGITPGVDPECMRAFLEAVHEE 371
>gi|321252537|ref|XP_003192441.1| uroporphyrinogen decarboxylase [Cryptococcus gattii WM276]
gi|317458909|gb|ADV20654.1| Uroporphyrinogen decarboxylase, putative [Cryptococcus gattii
WM276]
Length = 380
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 189/344 (54%), Gaps = 21/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY- 66
+L G P+W+MRQAGRYLPE+ ++RK +F + C TP LTLQPI RY
Sbjct: 27 LLRAASGEETPRAPVWVMRQAGRYLPEFLEVRKH-HSFFECCQTPSLASTLTLQPIDRYP 85
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDL--FLNYLLP 122
DA+I+F DILV+ ALG V + GP + +P +T ++ L ++++ L Y
Sbjct: 86 RLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDLKRLREDVNVQKELGY--- 142
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + LL
Sbjct: 143 VFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHELLR 202
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-----KY 237
++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V +
Sbjct: 203 RIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQLSH 262
Query: 238 PNAKFISFAKGAG----YMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPM 292
P FAKGA + L + T +GLDW+V P+ + K+ +QGN D
Sbjct: 263 PGIPITLFAKGANAPSTFSLLSDPAHTGYATLGLDWTVDPVEVREIVGKKVNLQGNFDST 322
Query: 293 RLVVGNQVMIDGVN--AILDVLGSGPFIFNLGHGITPQVDPKNV 334
L G + + V ++ G +I NLGHGITP V P+++
Sbjct: 323 VLYGGKEGIEKEVERLSVRWKEAGGGWIANLGHGITPNVKPEDM 366
>gi|317052493|ref|YP_004113609.1| uroporphyrinogen decarboxylase [Desulfurispirillum indicum S5]
gi|316947577|gb|ADU67053.1| uroporphyrinogen decarboxylase [Desulfurispirillum indicum S5]
Length = 339
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 189/340 (55%), Gaps = 20/340 (5%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G ++ P+W MRQAGRYLPEYR +RK + +FL+MC PE E+T+QPI DAAIL
Sbjct: 12 GKPVSRTPVWFMRQAGRYLPEYRAVRKNY-SFLEMCKLPEVACEVTVQPIDIIGTDAAIL 70
Query: 74 FSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILR 131
FSDILV + +G ++ F N P + +PI T Q + L + + + ++ +I +L+
Sbjct: 71 FSDILVPFEPMGLDLAF--NPAPVIANPIRTRQAVDSLRLDAAGEVTF---VYDAIKLLK 125
Query: 132 KKLPN-HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE 190
K+L + ++ LIGF GAP+T+A Y + G K++ + Y + F+ L+ V+AE
Sbjct: 126 KELASRNVPLIGFSGAPFTLACYAVEGAGSKNYPTLKRMMYSDPALFSDLMRAFVVVTAE 185
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
YL QI AG D IQIFD+ G L +++++ + ++ + R P I F G
Sbjct: 186 YLNNQIAAGADAIQIFDSWGGILSRQDYDHFVLPHMKSLMGQLNRSVP----IIFFIGNN 241
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD 310
L + T ++ +GLDW +PL A + VQGNLDP L +++ + V LD
Sbjct: 242 AHLLESQMSTGADVMGLDWRIPLDDARQRAGNLSVQGNLDPTLLFADQKLLKERV---LD 298
Query: 311 VLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+LG FIFNLGHGITP+ NV +V+ V I
Sbjct: 299 ILGRNNGREGFIFNLGHGITPETPVDNVKMVVELVHEYPI 338
>gi|15924824|ref|NP_372358.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927408|ref|NP_374941.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
N315]
gi|21283503|ref|NP_646591.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MW2]
gi|49486650|ref|YP_043871.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650622|ref|YP_186715.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
COL]
gi|87162428|ref|YP_494466.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195655|ref|YP_500461.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148268305|ref|YP_001247248.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH9]
gi|150394367|ref|YP_001317042.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH1]
gi|151221937|ref|YP_001332759.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980150|ref|YP_001442409.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu3]
gi|221142182|ref|ZP_03566675.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315165|ref|ZP_04838378.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253732490|ref|ZP_04866655.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735287|ref|ZP_04869452.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006622|ref|ZP_05145223.2| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793807|ref|ZP_05642786.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9781]
gi|258413744|ref|ZP_05682017.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9763]
gi|258420748|ref|ZP_05683687.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9719]
gi|258438410|ref|ZP_05689694.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9299]
gi|258447310|ref|ZP_05695457.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6300]
gi|258448207|ref|ZP_05696334.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6224]
gi|258452676|ref|ZP_05700675.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5948]
gi|258453360|ref|ZP_05701343.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5937]
gi|262050129|ref|ZP_06022983.1| uroporphyrinogen decarboxylase [Staphylococcus aureus D30]
gi|262052672|ref|ZP_06024864.1| uroporphyrinogen decarboxylase [Staphylococcus aureus 930918-3]
gi|269203470|ref|YP_003282739.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED98]
gi|282924163|ref|ZP_06331838.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9765]
gi|282928570|ref|ZP_06336169.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A10102]
gi|284024880|ref|ZP_06379278.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
132]
gi|294850261|ref|ZP_06790996.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9754]
gi|295406139|ref|ZP_06815947.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8819]
gi|296276034|ref|ZP_06858541.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MR1]
gi|297207451|ref|ZP_06923888.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244937|ref|ZP_06928814.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8796]
gi|300911536|ref|ZP_07128981.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380565|ref|ZP_07363240.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54036968|sp|P67420|DCUP_STAAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54036969|sp|P67421|DCUP_STAAW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54041040|sp|P67419|DCUP_STAAM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56748664|sp|Q6G8A2|DCUP_STAAS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71153329|sp|Q5HEU2|DCUP_STAAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122539215|sp|Q2FXA3|DCUP_STAA8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123485283|sp|Q2FFR2|DCUP_STAA3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234291|sp|A7X3T8|DCUP_STAA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172048956|sp|A6QI15|DCUP_STAAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083025|sp|A6U2T7|DCUP_STAA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083026|sp|A5ITZ9|DCUP_STAA9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13701627|dbj|BAB42920.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
N315]
gi|14247606|dbj|BAB57996.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50]
gi|21204944|dbj|BAB95639.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MW2]
gi|49245093|emb|CAG43559.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284808|gb|AAW36902.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
COL]
gi|87128402|gb|ABD22916.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203213|gb|ABD31023.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741374|gb|ABQ49672.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946819|gb|ABR52755.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH1]
gi|150374737|dbj|BAF67997.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722285|dbj|BAF78702.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu3]
gi|253723771|gb|EES92500.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726694|gb|EES95423.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787779|gb|EEV26119.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9781]
gi|257839531|gb|EEV64002.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9763]
gi|257843352|gb|EEV67762.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9719]
gi|257848454|gb|EEV72445.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9299]
gi|257853897|gb|EEV76853.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6300]
gi|257858446|gb|EEV81322.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6224]
gi|257859651|gb|EEV82500.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5948]
gi|257864452|gb|EEV87197.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5937]
gi|259159421|gb|EEW44473.1| uroporphyrinogen decarboxylase [Staphylococcus aureus 930918-3]
gi|259161754|gb|EEW46342.1| uroporphyrinogen decarboxylase [Staphylococcus aureus D30]
gi|262075760|gb|ACY11733.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED98]
gi|269941305|emb|CBI49702.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TW20]
gi|282589779|gb|EFB94864.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A10102]
gi|282592958|gb|EFB97960.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9765]
gi|285817514|gb|ADC38001.1| Uroporphyrinogen III decarboxylase [Staphylococcus aureus 04-02981]
gi|294822877|gb|EFG39311.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9754]
gi|294969136|gb|EFG45157.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8819]
gi|296887914|gb|EFH26810.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178017|gb|EFH37265.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8796]
gi|300887168|gb|EFK82368.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302751643|gb|ADL65820.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340894|gb|EFM06819.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830206|emb|CBX35048.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130524|gb|EFT86510.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196820|gb|EFU27164.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141316|gb|EFW33161.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143555|gb|EFW35335.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314510|gb|AEB88923.1| Uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
T0131]
gi|329727242|gb|EGG63698.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21172]
gi|329729490|gb|EGG65892.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21189]
gi|329732961|gb|EGG69305.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21193]
Length = 345
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 199/349 (57%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|37523446|ref|NP_926823.1| uroporphyrinogen decarboxylase [Gloeobacter violaceus PCC 7421]
gi|45476835|sp|Q7NEK2|DCUP_GLOVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|35214450|dbj|BAC91818.1| uroporphyrinogen decarboxylase [Gloeobacter violaceus PCC 7421]
Length = 347
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 190/343 (55%), Gaps = 15/343 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + + PP+W+MRQAGRY+ EYR +R K+ F + C P+ VE++LQP R +
Sbjct: 6 LLDAARSKPVARPPVWMMRQAGRYMAEYRALRDKY-GFKERCENPDLAVEISLQPFRAFR 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL D +G VE+ GP +DP T +++ + P + + L ++ I
Sbjct: 65 PDGVIMFSDILTPFDGMGIPFELVESRGPVIDPPIRTREQVEAVRPLDPEASLAFVRTIL 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+ LR+++ T++GF GAPWT+A+Y + G KD+ + A+ + LL
Sbjct: 125 QT---LRREVGEAATVLGFVGAPWTLAAYAVEGKSSKDYALIKQMAFSEPDLLHALLTKF 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+I QI +G +Q+FDT AG L ++ +A RI+ VR+ +P I
Sbjct: 182 ADAIARYVIFQIDSGAQAVQLFDTWAGQLNPADYRAFALPYERRIVEQVRQVHPETPLIL 241
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ + +L++ + + + LDW+V ++ A L + VQGNLDP +++G+Q I
Sbjct: 242 YINHSAGLLRHVGE-SGVDVMSLDWTVDMAEARAILGPDMAVQGNLDPC-VLLGDQAQIR 299
Query: 304 GVNAILDVL-GSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD++ +GP I NLGHGI P N +TV+S
Sbjct: 300 --SRILDIVEKAGPTGHIMNLGHGILPSTPEDNARFFFETVKS 340
>gi|284031652|ref|YP_003381583.1| uroporphyrinogen decarboxylase [Kribbella flavida DSM 17836]
gi|283810945|gb|ADB32784.1| uroporphyrinogen decarboxylase [Kribbella flavida DSM 17836]
Length = 364
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 179/333 (53%), Gaps = 16/333 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ L+ C P+ VE+TLQP+RRY DAAI FSDI++
Sbjct: 38 PVWFMRQAGRSLPEYRALREG-TTMLESCMRPDLVVEITLQPVRRYGVDAAIFFSDIVLP 96
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + P+ T ++ + P + Y + S+ L +L
Sbjct: 97 LKAVGVDLEIQPGVGPVVAAPVRTAADLAAVRPVTPADVAY---VTDSVRQLVGEL-GGT 152
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+TVASY++ GG KDH + + + + + ++ L D L+DV+ YL QI A
Sbjct: 153 PLIGFAGAPFTVASYLVEGGPSKDHAKTKSLMHADPKLWHALADRLADVAIAYLSVQIEA 212
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQ+FD+ AG L ++ + ++ A+ + + F G +L
Sbjct: 213 GASAIQLFDSWAGALSPRDYAEFVQPHSAKVFGALEQY--GVPRLHFGVNTGELL-GLMS 269
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEG----PVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
++ +G+DW VPL A+ + G PVQGNLDP L G + + ++ IL
Sbjct: 270 EAGADVVGVDWRVPLDEAVRRITAAGGSPKPVQGNLDPALLFAGWEAIEPQLDRILTEGR 329
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
S P IFNLGHG+ P DP+ + +V+ V ++
Sbjct: 330 SAPGHIFNLGHGVPPNADPEVLHKIVQAVHAKS 362
>gi|283471104|emb|CAQ50315.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ST398]
gi|298695101|gb|ADI98323.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED133]
Length = 345
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 198/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|262202196|ref|YP_003273404.1| uroporphyrinogen decarboxylase [Gordonia bronchialis DSM 43247]
gi|262085543|gb|ACY21511.1| uroporphyrinogen decarboxylase [Gordonia bronchialis DSM 43247]
Length = 354
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 180/323 (55%), Gaps = 22/323 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR IR + L+ C+ E E+T+QP+RR++ DAAILFSDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRAIRAE-HGMLESCFDAEMVCEITMQPVRRHDVDAAILFSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G ++ V GP + +PI T+ P L + + +++ ++ +L
Sbjct: 88 LKAAGVDLDIVAGTGPVIAEPIRTEADVTRLPR--LAPEAVGAVARAVELILAELGGDTA 145
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY+I GG +++ + + + +N L+ L+D++ +L Q+ AG
Sbjct: 146 LIGFAGAPFTLASYLIEGGPSRNYERTKAMMHGAPVVWNELMGRLADITIAFLRVQLDAG 205
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD IQ+FD+ AG L ++ + A R+++ V +Y I F G G +L
Sbjct: 206 VDAIQLFDSWAGMLSAADYARFVAPHSSRVLAEV-AEY-GVPRIHFGVGTGELLAPMAH- 262
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGN--------QVMIDGVNAI 308
++ IG+DW VPL A ++ GP VQGNLDP L G+ +V+ DG AI
Sbjct: 263 AGADVIGVDWRVPLDEA--ARRVGPGKAVQGNLDPTMLFAGDDVVDREIRRVVDDGDRAI 320
Query: 309 LDVLGSGPFIFNLGHGITPQVDP 331
+ G+ IFNLGHG+ P DP
Sbjct: 321 AE--GAVGHIFNLGHGVLPGTDP 341
>gi|315044081|ref|XP_003171416.1| uroporphyrinogen decarboxylase [Arthroderma gypseum CBS 118893]
gi|311343759|gb|EFR02962.1| uroporphyrinogen decarboxylase [Arthroderma gypseum CBS 118893]
Length = 364
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/352 (35%), Positives = 187/352 (53%), Gaps = 22/352 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGENVERPPIWIMRQAGRYLPEYHEAKGN-RDFFECCRSPEVASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYL 120
DAAI+FSDILVI A+G V ++ +GP +P+ T E ++N +D+ L
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPNPLRTPEDEQYTQVMNRTVDV-TKEL 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A L
Sbjct: 131 GYVYEAITLTRQKLEGRVPLIGFIGAPWTLLCYMVEGGGSKMFAAIKTWVYKYPDASKKL 190
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L +S+V E+L Q+ AG ++Q+FD+ AG L F ++ + I + + ++
Sbjct: 191 LQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFAEFSLPYLRYISANLPKRLQEM 250
Query: 240 ----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNLDPM 292
FAKGA Y L L +S N +GLDW + A + V QGN DP
Sbjct: 251 GLEVVPMTVFAKGAWYALDE---LCESGYNVVGLDWQHDAAKARAVANGRVVLQGNADPG 307
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHG+TP V P ++ + +R
Sbjct: 308 CLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIR 359
>gi|282917100|ref|ZP_06324858.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
D139]
gi|283770918|ref|ZP_06343810.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
H19]
gi|282319587|gb|EFB49939.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
D139]
gi|283461065|gb|EFC08155.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
H19]
Length = 345
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 197/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW + A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|325000858|ref|ZP_08121970.1| uroporphyrinogen-III decarboxylase [Pseudonocardia sp. P1]
Length = 356
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 179/341 (52%), Gaps = 14/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ ++G + P+W MRQAGR LPEYR +R+ L+ C TP+ T E+TLQP+RR+
Sbjct: 22 LDAVRGRRPSRLPVWFMRQAGRSLPEYRALRQH-NGMLEACLTPDLTCEITLQPVRRHGV 80
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V G V V GP +D P+ T P +L + +I
Sbjct: 81 DAAILFSDIVVPLYLAGIGVDIVPGTGPVVDHPVRTAAAVEALP--ELAPEQADAVGDAI 138
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S+L +L LIGF GAP+T+ASY+I GG ++H + + ++ L+ L+ +
Sbjct: 139 SLLLPEL-GETPLIGFAGAPFTLASYLIEGGPSRNHEKTKALMRSEPEVWHALMAKLARL 197
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ +L Q+ AGVD +Q+FD+ AG L E ++ + ++SA+ I F
Sbjct: 198 TGAFLQRQVAAGVDAVQLFDSWAGALSERDYREFVLPHSSAVLSALAGS--GLPRIHFGV 255
Query: 248 GAGYMLKNYRRLTDSNA--IGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G + Y +T++ A IG+DW PL A PVQGNLDP L G +
Sbjct: 256 GTAEL---YGAMTEAGADVIGVDWRTPLDVAAARAGGAVPVQGNLDPAVLFAGQDAIDAD 312
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I P +FNLGHG+ PQ DP V V+T+ S+
Sbjct: 313 VARIAAEGARCPGHVFNLGHGVLPQTDPDVVTRTVETIHSQ 353
>gi|49484075|ref|YP_041299.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425946|ref|ZP_05602370.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428611|ref|ZP_05605009.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431248|ref|ZP_05607625.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433928|ref|ZP_05610286.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436844|ref|ZP_05612888.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M876]
gi|282904409|ref|ZP_06312297.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C160]
gi|282906232|ref|ZP_06314087.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909150|ref|ZP_06316968.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911457|ref|ZP_06319259.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914629|ref|ZP_06322415.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M899]
gi|282919595|ref|ZP_06327330.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C427]
gi|282924975|ref|ZP_06332641.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C101]
gi|283958587|ref|ZP_06376038.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503701|ref|ZP_06667548.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510722|ref|ZP_06669427.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M809]
gi|293537264|ref|ZP_06671944.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428412|ref|ZP_06821041.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590622|ref|ZP_06949260.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MN8]
gi|56748678|sp|Q6GFM3|DCUP_STAAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49242204|emb|CAG40911.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271640|gb|EEV03786.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275452|gb|EEV06939.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278196|gb|EEV08844.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282021|gb|EEV12158.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284195|gb|EEV14318.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M876]
gi|282313341|gb|EFB43737.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C101]
gi|282317405|gb|EFB47779.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C427]
gi|282321810|gb|EFB52135.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M899]
gi|282325152|gb|EFB55462.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327414|gb|EFB57709.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331524|gb|EFB61038.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596027|gb|EFC00991.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C160]
gi|283790736|gb|EFC29553.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920109|gb|EFD97177.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095367|gb|EFE25632.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466613|gb|EFF09134.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M809]
gi|295127812|gb|EFG57449.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575508|gb|EFH94224.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MN8]
gi|312437702|gb|ADQ76773.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH60]
Length = 345
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 194/340 (57%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + + ILD + +G IFNLGHG+ P+V P+ +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETL 332
>gi|314933998|ref|ZP_07841363.1| uroporphyrinogen decarboxylase [Staphylococcus caprae C87]
gi|313654148|gb|EFS17905.1| uroporphyrinogen decarboxylase [Staphylococcus caprae C87]
Length = 344
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 196/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MHSNNDTILKTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIKSVQDVEKLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 PY-----VLETIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYGDEP 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L DVS +Y++AQI AG ++IQIFD+ G L ++ Y ++ +++S ++
Sbjct: 174 TWFALMDHLVDVSIKYVVAQIEAGAELIQIFDSWVGALNVQDYNYYIKPAMKKLVSGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW ++ A ++ +QGNLDP L+
Sbjct: 234 HY-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQADQMGVNKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + ILD + G IFNLGHG+ P+V P+ + + K V +
Sbjct: 292 APWDVIESRLKDILDQGMARGKHIFNLGHGVFPEVQPETLRKVSKFVHN 340
>gi|258443855|ref|ZP_05692194.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8115]
gi|282895131|ref|ZP_06303350.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8117]
gi|257851261|gb|EEV75204.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8115]
gi|282762475|gb|EFC02616.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8117]
Length = 345
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 198/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G + P+W MRQAGR PEYR++++K+ F D+ + PE T
Sbjct: 2 VHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYATH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|296811594|ref|XP_002846135.1| uroporphyrinogen decarboxylase [Arthroderma otae CBS 113480]
gi|238843523|gb|EEQ33185.1| uroporphyrinogen decarboxylase [Arthroderma otae CBS 113480]
Length = 364
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 188/346 (54%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI RY
Sbjct: 13 LLRTARGESVERPPIWIMRQAGRYLPEYHEAKGN-RDFFECCRSPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P+ T E ++N ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVVNRSVDVTKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ + A
Sbjct: 132 Y---VYKAITLTRQKLNGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYADASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL +S+V E+L Q+ AG ++Q+FD+ AG L F ++A + I + + ++
Sbjct: 189 KLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRAFADFALPYLRYISTNLPKRLR 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNLD 290
FAKGA Y L L +S + +GLDW + A + V QGN D
Sbjct: 249 EMGLDVVPMTVFAKGAWYALDE---LCESGYDVVGLDWQHDAAKARAVANGRVVLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
P L + + V ++ G G +I NLGHG+TP V P ++
Sbjct: 306 PGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDL 351
>gi|302333499|gb|ADL23692.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|323438515|gb|EGA96264.1| uroporphyrinogen decarboxylase [Staphylococcus aureus O11]
gi|323441350|gb|EGA99011.1| uroporphyrinogen decarboxylase [Staphylococcus aureus O46]
Length = 345
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 198/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDISVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|291301399|ref|YP_003512677.1| uroporphyrinogen decarboxylase [Stackebrandtia nassauensis DSM
44728]
gi|290570619|gb|ADD43584.1| uroporphyrinogen decarboxylase [Stackebrandtia nassauensis DSM
44728]
Length = 345
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 183/339 (53%), Gaps = 9/339 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L +G P+W MRQAGR LPEYR +R L C TP+ E+T+QP+R
Sbjct: 8 QSPFLRACRGEETPRTPVWFMRQAGRSLPEYRALRAD-TPMLTACRTPDMIREITMQPVR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G +V V GP + PI +++ + DL + I
Sbjct: 67 RHGVDAAIFFSDIVVPLAAVGVDVDIVAGTGPVVGQPI--RDMAGVEALRDLTPEDVPYI 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +LR++L LIGF GAP+T+ASY++ GG + + + + + ++ L
Sbjct: 125 TEAVGMLREEL-GATPLIGFAGAPFTLASYLVEGGPSRTYAKTKALMHGAPDVWHALCGR 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++A +L QI AG + +Q+FD+ AG L ++ + A ++SAV R P I
Sbjct: 184 LAGITASFLKVQIDAGANAVQLFDSWAGALSAADYGMFVAPHSAAVLSAVAR--PGVPRI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GAG++L + ++ +G+DW +PL+ A L + +QGNLDP L V+
Sbjct: 242 HFGVGAGHLLAAMGEV-GADVVGVDWRIPLTEAAGLVGDRALQGNLDPTTLFAPEDVLAH 300
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V +L + + IFNLGHG+ P+ D + V+ V
Sbjct: 301 EVRRVLAEGKAAKGHIFNLGHGVLPETDADALTKTVEYV 339
>gi|295401104|ref|ZP_06811078.1| uroporphyrinogen decarboxylase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976897|gb|EFG52501.1| uroporphyrinogen decarboxylase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 345
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 190/336 (56%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +YN
Sbjct: 10 LRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYNV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ Y+L
Sbjct: 69 DAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVERLGEIHPEEDV--PYVL-- 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 -ETIKLLTTEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQI AG D IQIFD+ G + ++ + ++ RI +A+R + N I
Sbjct: 183 LADMTIRYVKAQIRAGADAIQIFDSWVGAVSVDDYRTFIKPTMARIFAALREE--NVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + IGLDW + L A + +QGNLDP L+ +V+
Sbjct: 241 MFGVGASHLAKEWNDLP-LDVIGLDWRLSLREARQSGITKALQGNLDPAVLLAPWEVIEK 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P ++FNLGHGI P++ P+ + L
Sbjct: 300 RVKQILDEGMERPGYVFNLGHGIFPEIRPETLKRLT 335
>gi|161510048|ref|YP_001575707.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|189083027|sp|A8YY02|DCUP_STAAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160368857|gb|ABX29828.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 345
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/349 (33%), Positives = 199/349 (57%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKG 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHT 341
>gi|284167553|ref|YP_003405831.1| uroporphyrinogen decarboxylase [Haloterrigena turkmenica DSM 5511]
gi|284017208|gb|ADB63158.1| uroporphyrinogen decarboxylase [Haloterrigena turkmenica DSM 5511]
Length = 337
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 183/338 (54%), Gaps = 12/338 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G PP+WLMRQAGR+LPEYR++R + +F + TP+ +TLQP RY
Sbjct: 6 LVRAARGERTERPPVWLMRQAGRHLPEYRELRSE-HSFREAIETPDIAETITLQPYERYG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNYLLPIFQ 125
D ++FSDIL + LG + R GP + +P+ ++ + +++ L++ ++
Sbjct: 65 VDGVVMFSDILTCLEPLGFDYRIESGVGPVIPNPVEGPDDVPADHRDVETELDF---VYD 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ L + +IGF G P+T+ASY ++GG +G R F + AF LL+ +
Sbjct: 122 LLDRLSASVAETDAVIGFAGGPFTLASYAVAGGADHQNGAIRRFRAEQPAAFEELLERFA 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DV AEYL Q+ G DV+Q+FDT+A L ++E Y +I+SA+ +A I F
Sbjct: 182 DVVAEYLRLQVDHGADVVQLFDTYASVLPPADYEEYVRPLHRKILSAI-----DAPTILF 236
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+G G L+ R ++A+ LDW+V + A E PVQGNLDP L + + D
Sbjct: 237 VRGMGGRLEQL-RTGGADAVSLDWTVDMEHAREELGTTPVQGNLDPTLLFADPETVRDRT 295
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ G ++ NLGHG+ + ++V V+T ++
Sbjct: 296 ARMIEAAGPRGYVCNLGHGVGKETPIESVAAFVETAKN 333
>gi|73662274|ref|YP_301055.1| uroporphyrinogen decarboxylase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642906|sp|Q49YM7|DCUP_STAS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72494789|dbj|BAE18110.1| uroporphyrinogen-III decarboxylase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 344
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL +++G ++ P+W MRQAGR PEYR++++K+ F ++ + E +T
Sbjct: 1 MHNKNNTILNMIKGESVSHTPVWFMRQAGRSQPEYRRLKEKYSLF-EITHQAELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLQPIGVDVEIKSGIGPVIHNPIKTIQDVEKLGHIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYSDEA 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L ++S Y AQI AG +IQ+FD+ G L ++ Y ++ ++IS ++
Sbjct: 174 TWFALMDHLVEMSITYTSAQIEAGAQIIQVFDSWVGALNVQDYRYYIKPAMNKLISGIKE 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
KY N I F GA ++ + L + +GLDW + + A + + +QGNLDP L+
Sbjct: 234 KY-NVPVILFGVGASHLADEWNTLP-IDVLGLDWRLSIKEASSMNIDKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + + AILD + G IFNLGHG+ P+V P+ +
Sbjct: 292 APWDVIEERLKAILDQGIAHGKHIFNLGHGVFPEVKPETL 331
>gi|296171914|ref|ZP_06852978.1| uroporphyrinogen decarboxylase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295893913|gb|EFG73684.1| uroporphyrinogen decarboxylase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 353
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 181/334 (54%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+RR+ DAAILFSDI+V
Sbjct: 25 PVWFMRQAGRSLPEYRALRAQ-SDMLAACFDAELVCEITLQPVRRHGVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+ T ++ + P L + P+ ++++L L +
Sbjct: 84 LLGAGIDLDIVAGVGPVIASPVRTAADVDAMKP---LDRQRIQPVSDAVTLLVAAL-GEV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + + +++ L++ L+D++ +L AQ+ A
Sbjct: 140 PLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPGSWHALMEKLTDITVGFLRAQLEA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYMLKNY 256
GVD IQ+FD+ AG L ++ Y R+ A+ P F + A+ G M
Sbjct: 200 GVDAIQVFDSWAGALSLADYRAYVQPHSARVFGALAEHGVPMTHFGVGTAELLGAMSAAL 259
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ T + +G+DW L+ A G +QGNLDP+ L+ G + A++D
Sbjct: 260 QPAT-ATVVGVDWRTSLADAATRVAPGTALQGNLDPVVLMAGWPAVERAARAVVDDGRRA 318
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+G +FNLGHG+ P +P + DLV V S
Sbjct: 319 VDAGAGGHVFNLGHGVLPDTEPGVLTDLVSLVHS 352
>gi|223043623|ref|ZP_03613668.1| uroporphyrinogen decarboxylase [Staphylococcus capitis SK14]
gi|222443111|gb|EEE49211.1| uroporphyrinogen decarboxylase [Staphylococcus capitis SK14]
Length = 344
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 196/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MHSKNDTILKTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAA+L+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIKSVQDVEKLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 PY-----VLETIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYGDEP 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L DVS Y++AQI AG ++IQIFD+ G L ++ Y ++ +++S ++
Sbjct: 174 TWFALMDHLVDVSITYVVAQIEAGAELIQIFDSWVGALNVQDYNYYIKPAMKKLVSGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW ++ A ++ +QGNLDP L+
Sbjct: 234 HY-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQADQMGVNKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + ILD + G IFNLGHG+ P+V P+ + + K V +
Sbjct: 292 APWDVIESRLKDILDQGMVRGKHIFNLGHGVFPEVQPETLRKVSKFVHN 340
>gi|111023816|ref|YP_706788.1| uroporphyrinogen decarboxylase [Rhodococcus jostii RHA1]
gi|110823346|gb|ABG98630.1| uroporphyrinogen decarboxylase [Rhodococcus jostii RHA1]
Length = 362
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 21/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+RR+
Sbjct: 25 LLAAAEGRTPGRRPVWFMRQAGRSLPEYREIRSGI-GMLESCFDPALVCEITMQPVRRHG 83
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +P+ + P L + + Q+
Sbjct: 84 VDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAVAQA 141
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + R ++ LL L+D
Sbjct: 142 VQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPRTWHALLGTLAD 200
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
+ +L Q+ AGVD IQ+FD+ AG L E+ + R+ + V K P I F
Sbjct: 201 TTITFLQTQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEVESAKVPR---IHF 257
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
G G +L ++ +G+DW +PL A ++ GP +QGNLDP L G +
Sbjct: 258 GVGTGELLGAMGE-AGADVVGVDWRIPLDVA--ARRVGPGKALQGNLDPAVLFAGPAAVE 314
Query: 303 DGVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + IFNLGHG+ P DP + LV+ V S
Sbjct: 315 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 361
>gi|86740040|ref|YP_480440.1| uroporphyrinogen decarboxylase [Frankia sp. CcI3]
gi|123724052|sp|Q2JDD1|DCUP_FRASC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86566902|gb|ABD10711.1| uroporphyrinogen decarboxylase [Frankia sp. CcI3]
Length = 369
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/333 (36%), Positives = 176/333 (52%), Gaps = 32/333 (9%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R LD C E E+TLQP+RR+ DAAI FSDI+V
Sbjct: 51 PVWFMRQAGRVLPEYRALRAGVA-MLDSCRDAEMITEITLQPVRRFRPDAAIFFSDIVVP 109
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G ++ V GP + D + + L P+ + + ++ L +L
Sbjct: 110 LVAIGLDIDIVAGIGPVVAEPVRDAVGLAALRALEPDDVPY------VADAVRFLLAEL- 162
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAP+T+ASY+I GG +DH + + Y + ++ LL L+D++ +L Q
Sbjct: 163 GSTPLIGFAGAPFTLASYLIEGGPSRDHARTKALMYSEPKLWHALLARLADITTAFLRVQ 222
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AGVD +Q+FD+ AG L E ++ Y A R+++A + P I F G +L
Sbjct: 223 VDAGVDALQLFDSWAGALDEADYRRYVAPHSARVLAAFAGEVPR---IHFGVNTGELLAA 279
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ ++ +G+DW VPL A ++ GP VQGNLDP + V+ V DV
Sbjct: 280 MGQ-AGADVVGVDWRVPLDEA--ARRIGPGHAVQGNLDPTAVFAPEPVLAAKVR---DVC 333
Query: 313 GSGP----FIFNLGHGITPQVDP---KNVLDLV 338
G +FNLGHG+ PQ DP +V DLV
Sbjct: 334 ARGAEAEGHVFNLGHGVLPQTDPGVLAHVADLV 366
>gi|294497388|ref|YP_003561088.1| uroporphyrinogen decarboxylase [Bacillus megaterium QM B1551]
gi|294347325|gb|ADE67654.1| uroporphyrinogen decarboxylase [Bacillus megaterium QM B1551]
Length = 347
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 188/336 (55%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y
Sbjct: 11 LKACRGEKTDHVPVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPELGAYVTRLPVEQYGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ ++G +V GP + +PI + +++ + P D+ Y+L
Sbjct: 70 DAAILYKDIMSPLPSIGVDVEIKSGIGPVISNPIQSLSDVEKLGEITPEEDV--PYVLDT 127
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + +P LIGF GAP+TVASYMI GG K++ + + F Y +A+ L+D
Sbjct: 128 IKLLTTEQLNVP----LIGFAGAPFTVASYMIEGGPSKNYNKTKAFMYTEPKAWFALMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQI AG IQIFD+ G L ++ + + RI +++R K N I
Sbjct: 184 LADMTITYVKAQIDAGAKAIQIFDSWVGALNVADYRYFIKPVMERIFTSLREK--NVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW L A L +QGNLDP L+ +V+ +
Sbjct: 242 MFGVGASHLAKEWHDLP-LDVVGLDWRTQLDEARALGLTKTLQGNLDPAILLAPWEVIEE 300
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD + P +IFNLGHG+ PQV P+ + L
Sbjct: 301 RVTEILDKGMASPGYIFNLGHGVFPQVQPETLKRLT 336
>gi|172045690|sp|Q0S1F6|DCUP_RHOSR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 21/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+RR+
Sbjct: 18 LLAAAEGRTPGRRPVWFMRQAGRSLPEYREIRSGI-GMLESCFDPALVCEITMQPVRRHG 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +P+ + P L + + Q+
Sbjct: 77 VDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAVAQA 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + R ++ LL L+D
Sbjct: 135 VQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPRTWHALLGTLAD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISF 245
+ +L Q+ AGVD IQ+FD+ AG L E+ + R+ + V K P I F
Sbjct: 194 TTITFLQTQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEVESAKVPR---IHF 250
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
G G +L ++ +G+DW +PL A ++ GP +QGNLDP L G +
Sbjct: 251 GVGTGELLGAMGE-AGADVVGVDWRIPLDVA--ARRVGPGKALQGNLDPAVLFAGPAAVE 307
Query: 303 DGVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + IFNLGHG+ P DP + LV+ V S
Sbjct: 308 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 354
>gi|17231401|ref|NP_487949.1| uroporphyrinogen decarboxylase [Nostoc sp. PCC 7120]
gi|23813944|sp|Q8YQC4|DCUP_ANASP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17133043|dbj|BAB75608.1| uroporphyrinogen decarboxylase [Nostoc sp. PCC 7120]
Length = 350
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 185/339 (54%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP + +
Sbjct: 10 LLRAARGEIVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWKAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDI+ LG + E +GP + PI TQ +I L P L LP +
Sbjct: 70 PDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRP---LEPEAALPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y + G K + + A+ + + LL L
Sbjct: 127 TILQALRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLSKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y QI +G V+Q+FD+ AG L +++ +A R+ +++ +P+ I
Sbjct: 187 ADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
G+ +L+ + + ++ + +DW+V ++ A L K+ VQGNLDP L Q + D
Sbjct: 247 LVSGSAGVLERMGQ-SGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYASKQFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHG+ P +NV +T +
Sbjct: 306 RIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAK 344
>gi|123968174|ref|YP_001009032.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
AS9601]
gi|166234271|sp|A2BQ64|DCUP_PROMS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123198284|gb|ABM69925.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. AS9601]
Length = 346
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 180/333 (54%), Gaps = 12/333 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++QP +
Sbjct: 8 LLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISMQPFHAFK 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
D ILFSDIL +G N +E++GP + DPI T + + LNP+ L
Sbjct: 68 PDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLRELNPSESLSF----- 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A+ + LLD
Sbjct: 123 VGQVLSSLKKDVNNEATILGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNEPDLLHKLLD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ EYL QI +G V+QIFD+ AG L +++ +A +++ V+ +YP
Sbjct: 183 HFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDMFAGPYQKKVVEIVKAEYPETPI 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVM 301
I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L + +
Sbjct: 243 ILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGILFGNKKSI 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++ + + +I NLGHGI P +N
Sbjct: 302 KERIDDTFNKIKDRKYILNLGHGILPGTPEENA 334
>gi|212640102|ref|YP_002316622.1| uroporphyrinogen decarboxylase [Anoxybacillus flavithermus WK1]
gi|212561582|gb|ACJ34637.1| Uroporphyrinogen-III decarboxylase [Anoxybacillus flavithermus WK1]
Length = 349
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 190/342 (55%), Gaps = 17/342 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 6 KNDTFLRACRGEATEYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPV 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
+YN DAAIL+ DI+ A+G +V GP +D PI + + + ++P D+
Sbjct: 65 EQYNVDAAILYKDIMSPLPAIGVDVDIKAGIGPVIDNPIRSLADVERLGEIDPENDV--P 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y+L ++I +L K+ + LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 123 YVL---ETIRLLTKEQLT-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWF 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L D++ Y+ AQI AG IQIFD+ G + ++ + ++ RI +A+R ++
Sbjct: 179 ALMDKLGDMTIRYVKAQIRAGASAIQIFDSWVGAVNVSDYRQFIKPTMERIFTALRDEH- 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F GA ++ K + L + +GLDW + + A E+ +QGNLDP L+
Sbjct: 238 -VPLIMFGVGASHLAKEWHDLP-LDVVGLDWRLSIREAREMGLTKALQGNLDPAVLLAPW 295
Query: 299 QVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNVLDLV 338
+V+ V ILD + G ++FNLGHGI PQ+ P+ + L
Sbjct: 296 EVIEARVKQILDEGMAHEGGYVFNLGHGIFPQIKPETLKRLT 337
>gi|285018935|ref|YP_003376646.1| uroporphyrinogen decarboxylase [Xanthomonas albilineans GPE PC73]
gi|283474153|emb|CBA16654.1| putative uroporphyrinogen decarboxylase protein [Xanthomonas
albilineans]
Length = 354
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 188/352 (53%), Gaps = 19/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRREPVDQTPVWLMRQAGRYLPEYRATRARAGSFLAMAKTPELACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
R+ DAAILFSDIL I DA+G + FVE EGP+ P+ L P+++ L Y
Sbjct: 63 ARFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIAQLGVPDMETELRY- 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A YM+ GG ++ + + A + A + L
Sbjct: 122 --VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMVEGGGSDNYARIKAMALNDPTALHKL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYP 238
L +D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 180 LSVNTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLQRIAGELARGDGAE 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLV 295
I F KG L+ + + +G+DW++ L+ A ++ G +QGNLDP L
Sbjct: 240 RTPLILFGKGNAPYLEEL-AASGAEGVGVDWTIDLADA--ARRTGGRVALQGNLDPAVLY 296
Query: 296 VGNQVMIDGVNAILDVLGSG-----PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +L G +FNLGHG++P + P++V L+ V+
Sbjct: 297 GAPEAIERQVQRVLHSYAEGNGSPDGHVFNLGHGLSPDMQPEHVGALIAAVQ 348
>gi|254585929|ref|XP_002498532.1| ZYRO0G12518p [Zygosaccharomyces rouxii]
gi|238941426|emb|CAR29599.1| ZYRO0G12518p [Zygosaccharomyces rouxii]
Length = 368
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 187/341 (54%), Gaps = 17/341 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP W+MRQAGRYLPEY + + ++F ++C E E+T+QP++RY
Sbjct: 17 ILRAARGETVERPPCWIMRQAGRYLPEYHKAKGN-RDFFEICRDAEVASEITIQPVKRYA 75
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ T+E +L+ +D+ L L
Sbjct: 76 GLLDAAIIFSDILVIPQAMGMKVEMLEGKGPHFPEPLRTKEDAQKVLDYKVDV-LKELDW 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
F++I++ RKKL + L GFCG PWT+ YM GG K + + Q + LL
Sbjct: 135 AFRAITLTRKKLDGQVPLFGFCGGPWTLLVYMTEGGGSKMFKFAKEWINQYPDICHQLLQ 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY----- 237
+DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I S V ++
Sbjct: 195 KTTDVAIEFLSQQVIAGAQILQVFESWGGELSPADFDEFSLPYLKQISSKVPQRLQELGH 254
Query: 238 -PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
+ + FAKG+ Y L + NA+ LDW + A ++ Q +QGNLDP +
Sbjct: 255 KEHVPMVVFAKGSWYALDKLCGI-GYNAVSLDWLWNPADACKINQGRVTLQGNLDPGIIY 313
Query: 296 VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
++V+ V ++ G G +I N GHG P +DP+ +
Sbjct: 314 GSDEVITKRVETMIKQFGGGKSHYIVNFGHGTHPFMDPEKI 354
>gi|297622471|ref|YP_003703905.1| uroporphyrinogen decarboxylase [Truepera radiovictrix DSM 17093]
gi|297163651|gb|ADI13362.1| uroporphyrinogen decarboxylase [Truepera radiovictrix DSM 17093]
Length = 346
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 181/342 (52%), Gaps = 22/342 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
LE +G PIW+MRQAGRYL EYR +R ++ +F +MC TPE E+TLQP+RR++
Sbjct: 5 LEAARGQDTARAPIWIMRQAGRYLSEYRALRARY-SFWEMCRTPELAAEVTLQPLRRFDL 63
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILF DI+ +G + F + GP + +P+ + Q++ L P + + +
Sbjct: 64 DAAILFQDIMTPLPPMGVEIDF--SPGPVLKEPVRSAQQVRALRVPEGGEIAPF---VAE 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I ++R + P + LIGF GAP T+A+Y++ G KD+ + R F + LLD L+
Sbjct: 119 AIRLIRAESP--VPLIGFGGAPLTLATYLVQGSGSKDYDEFRQFLRYAPETAHALLDKLT 176
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--- 242
D+S YL Q+ AG +Q+FD+ AG + +A RI A+ A F
Sbjct: 177 DLSVRYLKVQLQAGAQAVQLFDSWAGLHDARVYREFAKPYNTRIFEAL------AAFGVP 230
Query: 243 -ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
+ A GA ++ + L + +DW VPLS L +QGNLDP L+ V+
Sbjct: 231 RLYIAVGALHLYGEIKDLP-CEVVSVDWRVPLSHVRPLLPGKTLQGNLDPAVLLAPEGVL 289
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L GP IFNLGHGI Q DP+ + LV VR
Sbjct: 290 RAEAERVLREGLGGPHIFNLGHGIMRQTDPERLAQLVAVVRE 331
>gi|257056401|ref|YP_003134233.1| uroporphyrinogen decarboxylase [Saccharomonospora viridis DSM
43017]
gi|256586273|gb|ACU97406.1| uroporphyrinogen decarboxylase [Saccharomonospora viridis DSM
43017]
Length = 353
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 177/330 (53%), Gaps = 14/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L C+ PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 30 PVWFMRQAGRSLPEYRKVREGVP-MLTACFDPELLAEITLQPVRRHGVDAAILFSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G ++ V GP + P+ ++ P ++ L P+ + +L ++L
Sbjct: 89 LYAAGTDIDIVAGTGPVVAHPVRSRADVAALPRLEP--EQLKPVADGVRLLVEQL-GRTP 145
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY+I GG KDH + + + ++ L L+ + +L Q+ AG
Sbjct: 146 LIGFAGAPFTLASYLIEGGPSKDHARTKALMHGEPELWHELAGALAQTALTFLRVQLDAG 205
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +Q+FD+ AG L ++ + ++ + I F G G +L + R
Sbjct: 206 VDAVQLFDSWAGALSAKDYREFVLPHSTTVLEGIASY--GVPRIHFGVGTGELLADMRD- 262
Query: 260 TDSNAIGLDWSVPLSFALE----LQKEGP-VQGNLDPMRLVVGNQVMIDGVNAIL-DVLG 313
++ +G+DW VPL A+ + P VQGNLDP L V+ V I+ +
Sbjct: 263 AGADVVGVDWRVPLDEAVRRLTTSDRPAPVVQGNLDPALLTAPWPVIEAEVRRIVSEGRA 322
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G IFNLGHG+ P+ DP+ + +V+ V S
Sbjct: 323 AGGHIFNLGHGVLPETDPEVLTRIVELVHS 352
>gi|78778968|ref|YP_397080.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9312]
gi|123755109|sp|Q31BV1|DCUP_PROM9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78712467|gb|ABB49644.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9312]
Length = 346
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 184/340 (54%), Gaps = 12/340 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G + PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVTRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G N +E++GP + DPI T + + LNP+ L
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLSQIESLKELNPSESL 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 SF-----VGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPD 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+
Sbjct: 176 LLHKLLDHFAKSIGEYLKFQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKE 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
+YP+ I + G+ +++ + T + I LDW+V + A + + E +QGN+DP L
Sbjct: 236 EYPDTPVILYISGSAGVIERMAK-TGVDIISLDWTVDIEEACKRIPDEIGIQGNVDPGIL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + + ++ + + +I NLGHGI P +N
Sbjct: 295 FGNKESIKERIDDTFNKIKDRKYILNLGHGILPGTPEENA 334
>gi|82751486|ref|YP_417227.1| uroporphyrinogen decarboxylase [Staphylococcus aureus RF122]
gi|123548089|sp|Q2YU05|DCUP_STAAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82657017|emb|CAI81454.1| uroporphyrinogen decarboxylase [Staphylococcus aureus RF122]
Length = 345
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 198/349 (56%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 61 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + +++
Sbjct: 121 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMFRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+
Sbjct: 175 TWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKE 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 235 KH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 293 APWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVHPETLRKVSEFVHT 341
>gi|148529989|gb|ABQ82201.1| uroporphyrinogen III decarboxylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 276
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 158/274 (57%), Gaps = 14/274 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VLQG + PPPIWLMRQAGRYLPE+R +R + +F+ C TP+ E+TLQPIRR
Sbjct: 3 KPLLRVLQGEAVWPPPIWLMRQAGRYLPEFRALRDQ-ADFITRCMTPDLATEITLQPIRR 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIF 124
Y D AILFSDIL++ A+G+++ FV +GP + I ++ ++ L+P + P+
Sbjct: 62 YAMDGAILFSDILILPWAMGQSLDFVAGKGPILGAIRSEADLARLDPK--RVPDATAPVM 119
Query: 125 QSISILRKKL--PN--------HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+++S LR L P+ +TL+GF GAP+TVA YM+ G ++ R AY +
Sbjct: 120 ETLSRLRAILDGPDPIGAAQGGRVTLLGFAGAPFTVACYMVEGHGSREFDATRGMAYSDP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
F+ L+ L+ +A+ L+AQI AG + + +FD+ +G L +F + I+ ++
Sbjct: 180 LLFDRLMATLTQATADMLVAQIDAGAEAVMLFDSWSGLLPPAQFRRHVIAPTRAIVQEIQ 239
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD 268
+ P I F + AG M Y R T + LD
Sbjct: 240 ARRPGVPVIGFPRLAGIMAAEYARETGLRVMALD 273
>gi|239637886|ref|ZP_04678847.1| uroporphyrinogen decarboxylase [Staphylococcus warneri L37603]
gi|239596449|gb|EEQ78985.1| uroporphyrinogen decarboxylase [Staphylococcus warneri L37603]
Length = 345
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 194/340 (57%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G + P+W MRQAGR PEYR++++K+ F D+ + PE +T
Sbjct: 2 VHTKNDTILKMIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAAIL+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 61 LPVDNYNTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIQNPIKSVQDVEKLSQIDPKRDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I IL ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKILTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNLTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L +S +Y+ AQI AG ++IQIFD+ G L ++ Y + ++++ ++R
Sbjct: 175 TWFALMDHLVAISIDYVNAQIEAGAELIQIFDSWVGALNVQDYRKYIKPGMDKLVNGIKR 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++ + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 235 QH-HVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSIQQAQQMGVNKTLQGNLDPSLLL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
+V+ + + ILD + G IFNLGHG+ P+V P+ +
Sbjct: 293 APWEVIEERLKDILDQGMSRGKHIFNLGHGVFPEVQPETL 332
>gi|319650143|ref|ZP_08004292.1| uroporphyrinogen decarboxylase [Bacillus sp. 2_A_57_CT2]
gi|317398324|gb|EFV79013.1| uroporphyrinogen decarboxylase [Bacillus sp. 2_A_57_CT2]
Length = 348
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 191/343 (55%), Gaps = 16/343 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L+ +G + P+W MRQAGR PEYR I++K+ F ++ + PE +T
Sbjct: 3 NSFNDTFLKAARGEQTDYVPVWYMRQAGRSQPEYRAIKEKYSLF-EITHQPELCAYVTRL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF 116
P+ +YN DAAIL+ DI+ ALG +V GP + +PI + +++ +NP D+
Sbjct: 62 PVEQYNNDAAILYKDIMSPLPALGVDVEIKSGIGPVISNPIRSIADVEKLGEINPEEDV- 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
Y+L ++I +L K+ + LIGF GAP+T+ASYMI GG K++ + + F Y +A
Sbjct: 121 -PYVL---ETIKLLTKEQLT-VPLIGFAGAPFTIASYMIEGGPSKNYNKTKAFMYAEPKA 175
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L+D L +++ Y+ +Q+ AG IQIFD+ G L ++ + + RI SA++ +
Sbjct: 176 WFALMDKLGEMTITYVKSQVKAGAKAIQIFDSWVGALNVEDYRYFIKPVMNRIFSALKEE 235
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ + L + +GLDW +P+ A VQGNLDP L+
Sbjct: 236 --NVPLIMFGVGASHLALEWHDLP-LDVVGLDWRLPIQEARAKGITKTVQGNLDPAILLA 292
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+V+ + AILD + P +IFNLGHG+ P+V+P + L
Sbjct: 293 PWEVIEERAKAILDQGMAKPGYIFNLGHGVFPEVNPDTLKKLT 335
>gi|239826184|ref|YP_002948808.1| uroporphyrinogen decarboxylase [Geobacillus sp. WCH70]
gi|259645150|sp|C5D6M5|DCUP_GEOSW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239806477|gb|ACS23542.1| uroporphyrinogen decarboxylase [Geobacillus sp. WCH70]
Length = 345
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 192/343 (55%), Gaps = 16/343 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++ L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T
Sbjct: 3 KQKNDTFLRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF 116
P+ +Y+ DAAIL+ DI+ A+G +V GP + +PI + +++ ++P D+
Sbjct: 62 PVEQYHVDAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVEKLGEIHPEEDV- 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
Y+L ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y +A
Sbjct: 121 -PYVL---ETIKLLTTEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKA 175
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L+D L+D++ Y+ AQI AG IQIFD+ G + ++ + ++ RI +A+R +
Sbjct: 176 WFALMDKLADMTIRYVKAQIRAGASAIQIFDSWVGAVNVDDYRTFIKPTMARIFAALREE 235
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ K + L + IGLDW + + A E +QGNLDP L+
Sbjct: 236 --NVPLIMFGVGASHLAKEWNDLP-LDVIGLDWRLSIREARERGITKALQGNLDPAVLLA 292
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+V+ V ILD P +IFNLGHGI P++ P+ + L
Sbjct: 293 PWEVIEKRVKQILDEGMEQPGYIFNLGHGIFPEIQPETLKRLT 335
>gi|218295097|ref|ZP_03495933.1| uroporphyrinogen decarboxylase [Thermus aquaticus Y51MC23]
gi|218244300|gb|EED10825.1| uroporphyrinogen decarboxylase [Thermus aquaticus Y51MC23]
Length = 341
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 182/340 (53%), Gaps = 13/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G PP+W MRQAGRY Y++IRK++ ++ PE E+TL P+R
Sbjct: 8 ILRAARGEPTPRPPVWFMRQAGRYQKSYQEIRKRY-TLPEIVKNPEVAAEVTLLPVRELG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLP-IF 124
DAAILF+DI +G + VE +GP + PI +E + L P L +P +
Sbjct: 67 VDAAILFADITTPLYGMGVALDLVEGKGPVIHKPIRDKEGVEALRP---LVPEEAVPFVL 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I +L+K+L + LIGF GAP+T+ASY++ GG + Q + F Y ++ L++ L
Sbjct: 124 EAIRLLKKEL--KVPLIGFAGAPFTLASYLVEGGPSRHFLQVKAFMYGEEALWHRLMEKL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A YL AQ AG D++Q+FD+ G LG ++ Y + R+ A+R I
Sbjct: 182 TEAMARYLEAQARAGADLLQVFDSWVGALGPADYRRYVKPHMKRLFQALRPL--GVPVIH 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G +L+ R + +GLD PL +A E+ PVQGNLDP L +V+
Sbjct: 240 FGVGTMGLLQEMRE-AGGDVMGLDHHTPLPWAREVLGNTPVQGNLDPAVLFAPKEVIRRE 298
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL+ G IFNLGHGI P+ +V +V+ V+
Sbjct: 299 VGRILEENAGRAGHIFNLGHGILPKTPHDHVAYVVELVKE 338
>gi|225012135|ref|ZP_03702572.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-2A]
gi|225003690|gb|EEG41663.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-2A]
Length = 341
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 185/339 (54%), Gaps = 12/339 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L G +N PP+W+MRQAGRYLP++ +++ K++ F C TPE E+T+ PI +
Sbjct: 8 LKALNGETVNRPPVWMMRQAGRYLPDFMKLKAKYE-FFTRCQTPELATEITIMPIDQIGP 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDILV+ A+ V + GP + +PI + E ++ P+I L Y+L
Sbjct: 67 DAAILFSDILVVLQAMQIPVEMKDGIGPWIPNPIRSSEQVSQVIVPDIHEHLGYVL---D 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + ++ L + + LIGF G+PWT+ Y + G K+ + F + A + LL ++
Sbjct: 124 AVKMTKQALNDRVPLIGFAGSPWTLLCYAVQGQGSKNFDIAKGFCFSQPEAAHALLQKIT 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + YL ++ AGV +Q+FD+ G L ++ ++ + +II A++ P I F
Sbjct: 184 DTTIAYLKEKVKAGVHAVQVFDSWGGLLSPDDYSIFSWPYIQQIIDALKEDIP---VIVF 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDG 304
KG + L R + ++A+G+DW+ A L + +QGN DP RL+ + G
Sbjct: 241 GKGCWFALNEMGR-SGASALGVDWTCTARNARYLSGGQITLQGNFDPSRLLSPIPEIKAG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +++ G +I NLGHGI P + + V V+
Sbjct: 300 VHKMINEFGKDKYIVNLGHGILPNIPVDHAKAFVDAVKE 338
>gi|164427732|ref|XP_964266.2| uroporphyrinogen decarboxylase [Neurospora crassa OR74A]
gi|157071862|gb|EAA35030.2| uroporphyrinogen decarboxylase [Neurospora crassa OR74A]
Length = 369
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 185/347 (53%), Gaps = 25/347 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY + K ++F ++C PE LTLQPI RY
Sbjct: 13 LLRAARGETVERPPIWVMRQAGRYLPEYHEA-KGGRDFFEVCRNPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V V+ +GP P Q L+ ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPNPLRSPSDGQYAELMKRDVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ RKKL + L GF GAPWT+ YM+ GG K + + + Y+
Sbjct: 132 Y---VYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKEVKTWIYKYPEETK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL +S++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + +
Sbjct: 189 ALLQKISELCVEYLALQVKAGAQIVQVFDSWAGELSPSSFKTFSQPYLTYIAKHLPLRLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDP 291
+ F KGA Y L + N +GLDW + A+++ + P +QGN DP
Sbjct: 249 EMGLEPVPMVVFPKGAWYALDAACDM-GYNVVGLDWLHDPAEAVKVVGDRPMVLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAIL---DVLGSGP-FIFNLGHGITPQVDPKNV 334
L ++ + V ++ D G +I NLGHGITP V+P ++
Sbjct: 308 GVLYGSHEAITKVVEEMVQGFDWHGRHKGWIVNLGHGITPFVNPDDL 354
>gi|315304386|ref|ZP_07874689.1| uroporphyrinogen decarboxylase [Listeria ivanovii FSL F6-596]
gi|313627242|gb|EFR96072.1| uroporphyrinogen decarboxylase [Listeria ivanovii FSL F6-596]
Length = 350
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/333 (34%), Positives = 187/333 (56%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTKLPVEQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T + + + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIKTYQDVERLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A+YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWKVLMEKLGRMTADYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG +Q+FD+ AG L ++ Y ++ +II ++ +P I A GA ++L
Sbjct: 195 IKAGASAVQLFDSWAGALSRRDYATYIRPTIEKIIVEIKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLG 313
+ + + +G+DW L+ A + +QGNLDP L+ + I+ IL VL
Sbjct: 255 WEHMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPEKC-IEETERILQEGVLK 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
G +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 313 PG-YIFNLGHGVFPEVSPEMLKKLTTYIHERSE 344
>gi|124515862|gb|EAY57371.1| Uroporphyrinogen decarboxylase [Leptospirillum rubarum]
Length = 356
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 180/326 (55%), Gaps = 12/326 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G PP+W+MRQAGRY+PEY++IRKK +FL +C TP+ + T+ P+
Sbjct: 11 LRACRGEKTERPPVWIMRQAGRYMPEYQEIRKK-TSFLGLCKTPDLAAQATMLPVDMLGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL+ +A+G + F E++GP P+ ++ LL P + + +
Sbjct: 70 DAAILFSDILIPVEAMGMELEFSEHKGPSFPRPVQSRMDVDRLLVPEPVAHTGF---VAE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++L + LIGF GAP+T+A+YM+ G KD + + + + + LLD ++
Sbjct: 127 AIREINRRLSGRLPLIGFAGAPFTLATYMVEGEISKDFSRVKQMMFSDPETLHTLLDRIT 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ YL QI AG+ QIFDT AG L + ++A V RI+ +++R I +
Sbjct: 187 ETVIRYLEMQIEAGIHAYQIFDTWAGSLSPVHYRSFALPYVRRIVDSLQRH--GIPSILY 244
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G+ +L++ +N + +DW + L+ E + +QGNLDP+ L+ ++ D
Sbjct: 245 VNGSCALLEDM-VTAGTNVVSVDWRMSLANVRERVPASVSIQGNLDPVSLLGTPAILRDE 303
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQV 329
IL D+ G ++FNLGHGI P
Sbjct: 304 TRRILEDMKGRPGYVFNLGHGILPST 329
>gi|186682843|ref|YP_001866039.1| uroporphyrinogen decarboxylase [Nostoc punctiforme PCC 73102]
gi|238056490|sp|B2J9R9|DCUP_NOSP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|186465295|gb|ACC81096.1| uroporphyrinogen decarboxylase [Nostoc punctiforme PCC 73102]
Length = 353
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 187/341 (54%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D P+ +E++LQP + +
Sbjct: 10 LLRAARGEVVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPDVAIEVSLQPWKAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D ILFSDI+ LG ++ E +GP + P+ TQE I L+P L LP +
Sbjct: 70 PDGVILFSDIVTPLPGLGIDMDIAEGKGPIIHSPLRTQEQIDRLHP---LEPEAALPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR ++ + T++GF GAPWT+A+Y + G K + + A+ + + LL L
Sbjct: 127 TILQALRSEVGDKSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLTKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y QI +G V+Q+FD+ AG L +++ +A R+ V++ +P+ I
Sbjct: 187 ADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
G+ +L+ R+ S A + +DW+V ++ A L K+ VQGNLDP L Q +
Sbjct: 247 LVSGSAGVLE---RMAQSGADIVSVDWAVDMADARARLGKQVKVQGNLDPGVLFGSKQFI 303
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
D + + G+ I NLGHG+ P+ +NV +T +
Sbjct: 304 RDRILDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAK 344
>gi|16332025|ref|NP_442753.1| uroporphyrinogen decarboxylase [Synechocystis sp. PCC 6803]
gi|1706336|sp|P54224|DCUP_SYNY3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|1001337|dbj|BAA10824.1| uroporphyrinogen decarboxylase [Synechocystis sp. PCC 6803]
Length = 350
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 194/347 (55%), Gaps = 23/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G V+ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E++LQP + +
Sbjct: 10 LLRVARGEVVKRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWQAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLNYLLP 122
D I+FSDIL +G +E++GP +D PI TQ +++ L+P LP
Sbjct: 70 PDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQVDQLHALDPESS------LP 123
Query: 123 IFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I LRK++ N T++GF GAPWT+A+Y I G KD+ + A+ + L
Sbjct: 124 FIKTILGTLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKDYKVIKQMAFSEPAILHSFL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D +++ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+
Sbjct: 184 DKIAEAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYDTFALPYQQKVVKLVKEIHPDTP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + + + +DW+V ++ A + L KE VQGN+DP ++ G+Q
Sbjct: 244 LILYISGSAGILERMGK-SGVDIVSVDWTVDMADARQRLGKEMKVQGNMDP-GVLFGSQD 301
Query: 301 MIDGVNAILDVL---GSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
I ILD + G G IFNLGHG+ TP+ + + + K V
Sbjct: 302 FIK--ERILDTVRKAGQGGHIFNLGHGVLVGTPEDNVRFFFETAKQV 346
>gi|116181730|ref|XP_001220714.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185790|gb|EAQ93258.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 370
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 187/351 (53%), Gaps = 33/351 (9%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL V +G + PPIW+MRQAGRYLPEY + K ++F + C PE LTLQPI RY
Sbjct: 13 ILRVARGEKVERPPIWVMRQAGRYLPEYHEA-KGGRDFFECCRDPEVASTLTLQPIERYG 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DA+I+FSDILVI A+G V V+ +GP P Q ++ N+D+ L+
Sbjct: 72 GLLDASIIFSDILVIPQAMGMVVEMVDKKGPHFPSPLQSPDDGQYAEVMKRNVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ RKKL + L GFCGAPWT+ YM+ GG K + + + Y+
Sbjct: 132 Y---VYKAITLTRKKLQGRVPLFGFCGAPWTLFCYMVEGGGSKFFKETKKWIYKYPEETK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL +S++ EYL Q+ AG +IQ+FD+ AG L F+ ++ + I + +
Sbjct: 189 ALLQKISELCVEYLALQVKAGAQLIQVFDSWAGELSPSSFKKFSQPYLEYIAKHLPPRLK 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDP 291
+ F KGA Y L + + +GLDW + A++ + PV QGN DP
Sbjct: 249 EMGLEPVPMVVFPKGAWYALDAACNM-GYHIVGLDWLHDPAEAVKTVGDRPVVLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--------PFIFNLGHGITPQVDPKNV 334
++ G+ G+ +++ + G +I NLGHGITP V+P ++
Sbjct: 308 -GVLYGSHA---GITEVVEEMVKGFDWANRRKGWIVNLGHGITPFVNPDDL 354
>gi|300784549|ref|YP_003764840.1| uroporphyrinogen-III decarboxylase [Amycolatopsis mediterranei U32]
gi|299794063|gb|ADJ44438.1| uroporphyrinogen-III decarboxylase [Amycolatopsis mediterranei U32]
Length = 356
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ LD C+ PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 37 PVWFMRQAGRSLPEYRALREGVP-MLDACFDPEMLAEITLQPVRRHGVDAAILFSDIVVP 95
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
A G ++ V GP + +++ + +L + + + +L +L L
Sbjct: 96 LKAAGVDIDIVPGTGPVVA-TPVRDLAAVKALPELEPEQVSKVADGVRLLVARL-GGTPL 153
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAP+T+ASY+I GG ++H + + + ++ L L+D++ +L AQ+ AGV
Sbjct: 154 IGFAGAPFTLASYLIEGGPSRNHEHTKALMHTSPEVWHELAGRLADLALTFLRAQLDAGV 213
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
D +Q+FD+ AG L E ++ + ++++ V +Y I F G G +L R
Sbjct: 214 DAVQLFDSWAGALSERDYREFVLPHSAKVLAGV-AEY-GVPRIHFGVGTGELLAAMRD-A 270
Query: 261 DSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
++ +G+DW +PL A+ L VQGNLDP L V+ V I++ + I
Sbjct: 271 GADVVGVDWRIPLDEAVRRLGGRAVVQGNLDPALLHASWPVLAAEVRRIVEEGKAAEGHI 330
Query: 319 FNLGHGITPQVDPKNVLDLVKTV 341
FNLGHG+ P VDP + +V V
Sbjct: 331 FNLGHGVLPGVDPDVLTRVVGLV 353
>gi|302557675|ref|ZP_07310017.1| uroporphyrinogen decarboxylase [Streptomyces griseoflavus Tu4000]
gi|89274977|gb|ABD65940.1| uroporphyrinogen decarboxylase [Streptomyces fungicidicus]
gi|302475293|gb|EFL38386.1| uroporphyrinogen decarboxylase [Streptomyces griseoflavus Tu4000]
Length = 364
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 186/347 (53%), Gaps = 16/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R+ L+ + + P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+
Sbjct: 25 RESAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGI-GMLDSCMRPELVTEITLQPV 83
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLL 121
RR++ DAAI FSDI+V A+G ++ GP ++ P+ T+ ++ L DL +
Sbjct: 84 RRHHVDAAIYFSDIVVPLKAIGIDLDIKPGIGPVVEQPVRTRADLARLR---DLTPEDVS 140
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I +L ++L LIGF GAP+T+ASY++ GG + + + Y + + LL
Sbjct: 141 YVTEAIGMLTREL-GSTPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLL 199
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+D++A +L QI AG +Q+FD+ AG L ++ + ++ AV
Sbjct: 200 DRLADITAAFLDVQIRAGASAVQLFDSWAGALAPSDYRRSVLPASAKVFRAVAGH--GVP 257
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGN 298
I F G G +L ++ +G+DW VP+ A ++ GP +QGNLDP L G
Sbjct: 258 RIHFGVGTGELL-GLMGEAGADIVGVDWRVPMDEA--ARRVGPGKALQGNLDPTVLFAGR 314
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + +LD G IFNLGHG+ P DP + LV+ V ++
Sbjct: 315 EAVETKAREVLDTAAGLEGHIFNLGHGVMPSTDPDALTRLVEYVHTQ 361
>gi|257069783|ref|YP_003156038.1| uroporphyrinogen decarboxylase [Brachybacterium faecium DSM 4810]
gi|256560601|gb|ACU86448.1| uroporphyrinogen decarboxylase [Brachybacterium faecium DSM 4810]
Length = 346
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 178/342 (52%), Gaps = 9/342 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L+ L+G P +W MRQAGR LPEYR +R+ LD C PE E+T+QP+RR+
Sbjct: 5 SLLQELRGVRAATPSVWFMRQAGRSLPEYRSLREG-TTMLDSCVRPEMAAEITVQPVRRH 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIF 124
DA I FSDI+V A G V GP D P+ T+ ++ L P D + L PI
Sbjct: 64 RVDAGIFFSDIVVPARQAGLGVEIQPGVGPVFDHPVRTEADVDALPPLGDDYEAALDPIR 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L LIGF GAP+TVASYM+ GG +DH + R + L ++
Sbjct: 124 EAVRLTVAEL-GTTPLIGFAGAPFTVASYMVEGGPSRDHLRTRALMRSQPEVWARLASWV 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+++S +L AQ+ AG +Q+FD+ G L ++ + + ++ V P + I
Sbjct: 183 AELSGRFLRAQVLAGASAVQLFDSWVGALSVEQYLAHVQQHSADALAHV-TALPVPR-IH 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F GA ++L + A+G+D + L ALEL +G PVQGN+DP L Q
Sbjct: 241 FGVGAAHLLPQMFE-AGATAMGVDHRLRLDHALELLPQGTPVQGNIDPAVLFTSEQARFA 299
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + + NLGHG+ P DP+ + DLV + ++
Sbjct: 300 EAREVLAAGAAASGHVVNLGHGVPPTADPQVLTDLVSFLHAQ 341
>gi|326802531|ref|YP_004320350.1| uroporphyrinogen decarboxylase [Sphingobacterium sp. 21]
gi|326553295|gb|ADZ81680.1| Uroporphyrinogen decarboxylase [Sphingobacterium sp. 21]
Length = 345
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 184/330 (55%), Gaps = 14/330 (4%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR++ EY I+ K+ +FL+MC TPE ++T+ P+ DAAILFSDILV
Sbjct: 22 PPVWMMRQAGRFMKEYWDIKNKY-SFLEMCKTPEIAADVTMLPVDLLGIDAAILFSDILV 80
Query: 80 IADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+A+G + F + GP+ +P+ + +I L ++ L Y + +I +++++L
Sbjct: 81 TAEAMGGELSFTQGVGPKFANPVRNESDIDALQTDVADKLQY---VADAIQVIQQRLNGA 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
I LIGF GAP+TV SY+I GG KD ++F + LL ++DV+ YL QI
Sbjct: 138 IPLIGFAGAPFTVLSYLIEGGSSKDFKLTKLFLNNQPELAHKLLKKIADVTVTYLNMQIK 197
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AGV+ +Q+FD+ A L ++ ++ + II+ + RK + ISF KG+ +
Sbjct: 198 AGVNALQLFDSWALALSWDDYSEFSHQYNAGIIAQLDRK--DIPVISFCKGSS-VFAPLM 254
Query: 258 RLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL-GSG 315
+ I +DW+ L L K VQGNLDP L V+ + + + + G
Sbjct: 255 AEAKPDVISVDWNADLKQIKNNLPKGIAVQGNLDPFILYADKAVIKKKILHLFERMRGEE 314
Query: 316 PFIFNLGHGITPQVDPKNV---LDLVKTVR 342
FIFNLGHGI P + NV +D+VK R
Sbjct: 315 GFIFNLGHGIMPDIPFDNVKYAIDVVKEFR 344
>gi|284041332|ref|YP_003391262.1| uroporphyrinogen decarboxylase [Spirosoma linguale DSM 74]
gi|283820625|gb|ADB42463.1| uroporphyrinogen decarboxylase [Spirosoma linguale DSM 74]
Length = 339
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + P+W+MRQAGR LP+YR +R++ +F+ + TPE E+T+
Sbjct: 1 MTLQNDLLLRTARGELTERVPVWMMRQAGRVLPQYRAVRERAGSFITLAKTPELAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ ++ DAAI+FSDILV+ +A+G +E+ GP + L + + + L
Sbjct: 61 QPVDAFDVDAAIIFSDILVVPEAMGLPYEMIESRGPVFPTTVRNQADLSHLRVADAESDL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + +K+L N + LIGF GAP+T+ YM G K + Y + + L
Sbjct: 121 GYVLDAIKLTKKELNNRVPLIGFAGAPFTIFCYMTEGKGSKTFSVAKKLLYTDPNFAHAL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL AQI AGVD++QIFD+ AG L ++ ++ + +I +
Sbjct: 181 LQQITDSTIAYLQAQIRAGVDLVQIFDSWAGILSPEQYRTFSLPYIKQICDVIS----EV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
FAKGA + +L+ + +GLDW++ + L + +QGNLDP L
Sbjct: 237 PVTVFAKGAFFARHEIGQLS-CDVVGLDWNMDPKESRALVPDRVLQGNLDPCVLYADFAQ 295
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L G +I NLGHGI P DP V V+
Sbjct: 296 IRAEAKQMLSDFGHQHYIANLGHGIYPDTDPDKARCFVDAVKE 338
>gi|45200887|ref|NP_986457.1| AGL210Cp [Ashbya gossypii ATCC 10895]
gi|44985657|gb|AAS54281.1| AGL210Cp [Ashbya gossypii ATCC 10895]
Length = 367
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 186/343 (54%), Gaps = 21/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP W+MRQAGRYLPEY + K ++F + C E E+TLQP+RRY
Sbjct: 17 MLRAARGEDVERPPCWIMRQAGRYLPEYHDV-KGGRDFFETCRDAEIASEITLQPVRRYA 75
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ T E + +L +D+ L L
Sbjct: 76 GLLDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRTTEQLMKVLEYEVDV-LRELDW 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
F++I++ R+KL + L GFCG PWT+ YM GG + + + ++ + LL
Sbjct: 135 AFRAITLTRQKLAGDVPLFGFCGGPWTLLVYMTEGGGSRLFRFAKEWIHKRPELAHKLLQ 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY----- 237
++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I +AV +
Sbjct: 195 KITDVAIEFLAQQVVAGCQILQVFESWGGELSPADFDEFSLPYLKQIAAAVPARLRELGI 254
Query: 238 -PNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLDPMR 293
+ FAKG+ Y L +L D+ N + LDW + A+ + +QGNLDP
Sbjct: 255 TEDVPMTVFAKGSWYALD---KLCDAGYNTVSLDWLWDPAEAVRINNGRVTLQGNLDPTV 311
Query: 294 LVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ ++ + A++ G G +I N GHG P +DP+ +
Sbjct: 312 MYGSDETITKKTEAMIKGFGGGKKQYIVNFGHGTHPFMDPEKI 354
>gi|295394780|ref|ZP_06804995.1| uroporphyrinogen decarboxylase [Brevibacterium mcbrellneri ATCC
49030]
gi|294972376|gb|EFG48236.1| uroporphyrinogen decarboxylase [Brevibacterium mcbrellneri ATCC
49030]
Length = 348
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 174/326 (53%), Gaps = 9/326 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY++ R+ LD C PE T E+TLQP+RR+ DAAI FSDI+V
Sbjct: 17 PVWFMRQAGRSLPEYKKAREGIA-MLDACLMPELTAEITLQPVRRHGVDAAIFFSDIVVP 75
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP P+ T+E P DL + I Q++++ R+ LP
Sbjct: 76 LKIAGMDVEIQPGIGPVFAQPVRTREDLARIP--DLTADMCEAIAQAVTLTREGLPEDTA 133
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+TVASY+I GG K+H + + + F+ +L L+ +SA ++ AQ+ AG
Sbjct: 134 LIGFAGAPFTVASYLIEGGPSKNHEKTKAMMLGDPELFSAILGKLAHMSATFIQAQLDAG 193
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG L ++E Y + A+ + N I F G +L +
Sbjct: 194 AHAFQLFDSWAGYLNRADYERYVLPHSRTVFDAL--AHNNVPSIHFGVTTGELLGSM-ST 250
Query: 260 TDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV-LGSGPF 317
S+ +G+D+ V L A + + G +QGNLDP + V+ + I+ L G
Sbjct: 251 AGSSVMGVDFRVDLDDASKRVQPGQALQGNLDPALVFAPWDVIASRIEDIVRAGLRHGGH 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP + +V+ V +
Sbjct: 311 IFNLGHGVLPTSDPTVLTRIVEEVHT 336
>gi|229491287|ref|ZP_04385113.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis SK121]
gi|229321826|gb|EEN87621.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis SK121]
Length = 365
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 183/348 (52%), Gaps = 23/348 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+RR++
Sbjct: 28 LLAAATGRTPSRRPVWFMRQAGRSLPEYREIRAGI-GMLESCFDPALVCEITMQPVRRHD 86
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +PI + P L + I Q+
Sbjct: 87 VDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPIRSIADVAALPR--LVPEEVGAIAQA 144
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL L+D
Sbjct: 145 VRLLTTEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHEKTKALMHSDPKTWHALLGSLAD 203
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +L AQ+ AGVD +Q+FD+ AG L ++ + R+ + V I F
Sbjct: 204 TTICFLQAQLKAGVDAVQLFDSWAGALSLADYREFVLPHSERVFAEV--AAAGVPRIHFG 261
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVM-- 301
G G +L ++ +G+DW +PL A + GP +QGNLDP L G +V+
Sbjct: 262 VGTGELLGAMGE-AGADVVGVDWRIPLDVA--AGRVGPGKALQGNLDPAVLFAGPEVIDR 318
Query: 302 ------IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G AI G+ IFNLGHG+ P DP + V+ V S
Sbjct: 319 EVRRIAAEGDRAI--EAGAIGHIFNLGHGVLPDTDPTAITAAVELVHS 364
>gi|289548317|ref|YP_003473305.1| uroporphyrinogen decarboxylase [Thermocrinis albus DSM 14484]
gi|289181934|gb|ADC89178.1| uroporphyrinogen decarboxylase [Thermocrinis albus DSM 14484]
Length = 336
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 181/343 (52%), Gaps = 22/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ ++G I P+WLMRQAGRY+P+YR++R K +FL C + E++L P+
Sbjct: 6 LLQSIKGEPIKRFPVWLMRQAGRYMPQYRELRNKAPDFLTFCKDVKLATEVSLLPLHLLG 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DA I+FSDIL+ + +G V F + EGP ++ E+ N +P F+ +
Sbjct: 66 VDAIIIFSDILIPLEPMGVKVSFKDGEGPSLE--WDGEVK----------NLRVPSFREV 113
Query: 128 SILR------KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
S + K+L + +IGFCG P+T+ASY+I GG + + F + + L+
Sbjct: 114 SFVGEIIEEVKRLQKEVPVIGFCGGPFTLASYIIEGGSSSTLKKTKTFMWNRKDEWEHLM 173
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L + YL+ Q AG DV+QIFDT L +FENY R + R++ V+ K
Sbjct: 174 NLLVETLTHYLVGQAKAGADVLQIFDTWISYLPFEDFENY-KRWLLRLVMQVKEK-TQVP 231
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F +G+ L+ +A+ +DW+V + ++ QGN+DP L V+
Sbjct: 232 IIYFFRGSSSFLEALEG-EKLDAVSVDWTVDMIGWMKRAPHLTFQGNMDPSLLYCEEDVI 290
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ +L V S +IFNLGHG++P +D V LV TV+S
Sbjct: 291 IEKTRGLLQKVPRSTRYIFNLGHGLSPDMDLNKVKLLVNTVKS 333
>gi|169630069|ref|YP_001703718.1| uroporphyrinogen decarboxylase (HemE) [Mycobacterium abscessus ATCC
19977]
gi|169242036|emb|CAM63064.1| Probable uroporphyrinogen decarboxylase (HemE) [Mycobacterium
abscessus]
Length = 389
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 176/345 (51%), Gaps = 19/345 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L G V + PP+W MRQAGR LPEYR +R LD C+ PE E+TLQPIRR+
Sbjct: 53 LVAAAGGVPSHPPVWFMRQAGRSLPEYRAVRADHA-MLDACFNPELVCEITLQPIRRHRV 111
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V A G ++ V + GP + +P+ T P ++ + + ++
Sbjct: 112 DAAILFSDIVVPLKAAGIDLDIVPDVGPVIANPVRTTADVAALPRLEP--GQVEAVSAAV 169
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+L +L LIGF GAP+T+ASY++ GG + H + + + + ++ L+ L+D+
Sbjct: 170 RLLVGEL-GATPLIGFAGAPFTLASYLVEGGPSRHHQRTKALLLGDPQTWHALMTALTDI 228
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ +L AQ+ AGVD +Q+FD+ AG L ++ RI F
Sbjct: 229 TIAFLRAQLDAGVDALQLFDSWAGALSLADYRAAVLPHSTRIFQEFAGV--GVPMTHFGV 286
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVG--------N 298
G +L + +G+DW PL+ A G +QGNLDP L+ G
Sbjct: 287 GTAELLGAMGE-AGATVVGVDWRTPLNVAASRVGSGKALQGNLDPAVLLAGWPVVESEVR 345
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ +G A+ D G+ IFNLGHG+ P DP + D V S
Sbjct: 346 RIVAEGRQAVAD--GAAGHIFNLGHGVLPDTDPAVLTDAAALVHS 388
>gi|119485171|ref|ZP_01619556.1| uroporphyrinogen decarboxylase [Lyngbya sp. PCC 8106]
gi|119457399|gb|EAW38524.1| uroporphyrinogen decarboxylase [Lyngbya sp. PCC 8106]
Length = 354
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 187/350 (53%), Gaps = 14/350 (4%)
Query: 1 MNERKQ--KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E Q +L +G ++ PP+W+MRQAGRY+ YR +R ++ +F D + VE+
Sbjct: 1 MSESTQIPYLLRAARGEQLDRPPVWMMRQAGRYMKAYRDLRDQYPSFRDRSEKTDIAVEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-----ITTQEIYLLNPNI 113
+LQP R + D ILFSDIL +G N VE++GP +DP +++Y L P
Sbjct: 61 SLQPYRAFAPDGVILFSDILTPLPGMGINFDIVESKGPIIDPPIRSLSQIEQVYPLEP-- 118
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ L ++ I Q+ LR+++ N ++GF GAPWT+A+Y I G KD+ + A+
Sbjct: 119 EESLPFIREILQT---LRQEVGNKAAVLGFVGAPWTLAAYAIEGKSSKDYTVIKSMAFSE 175
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ L L+D A Y+ QI G ++Q+FD+ AG L ++E +A R++ V
Sbjct: 176 PEMLHQFLGKLADSIATYVRYQIDCGAQIVQMFDSWAGQLAPQDYETFALPYQKRVVDLV 235
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
++ +P+ I + G+ +L+ + T + I +DW+V ++ A + VQGN+DP
Sbjct: 236 KQTHPDTPMILYINGSSGILERMSK-TGVDMISVDWTVDMAEARSRIGHHLGVQGNIDPC 294
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L Q++ D + + G+ I NLGHG+ + +NV +T +
Sbjct: 295 VLFGSKQLIRDRILETIRKAGNRGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|212540048|ref|XP_002150179.1| uroporphyrinogen decarboxylase [Penicillium marneffei ATCC 18224]
gi|210067478|gb|EEA21570.1| uroporphyrinogen decarboxylase [Penicillium marneffei ATCC 18224]
Length = 363
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 188/346 (54%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+W+MRQAGRYLPEY + + ++F D C +PE LTLQPI RY
Sbjct: 13 LLRAARGETVERPPMWVMRQAGRYLPEYHEAKGN-RDFFDCCRSPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR-----MDPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP + P Q +L ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMVVEMIDKKGPSFPQPLVSPDDGQYEKILKKDVDVKKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 132 Y---VYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGTKMFIQSKKWIYKYPNESK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L ++++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + ++
Sbjct: 189 AMLQKIAELCVEYLALQVTAGAQLVQVFDSWAGELSPATFKEFSLPYLRYISEHLPKRLQ 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L++ L +S N +GLDW + A + + +QGN D
Sbjct: 249 ELGLERVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAYRIARGRVTLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNV 334
P L + V ++ G +I NLGHGITP V+P+++
Sbjct: 306 PGILYGDRSAITKTVEDMVKGFGGGKKGWIANLGHGITPLVNPEDL 351
>gi|115438661|ref|NP_001043610.1| Os01g0622300 [Oryza sativa Japonica Group]
gi|75333178|sp|Q9AXB0|DCUP1_ORYSJ RecName: Full=Uroporphyrinogen decarboxylase 1, chloroplastic;
Short=UPD1; Short=URO-D1; Flags: Precursor
gi|12313673|dbj|BAB21078.1| putative uroporphyrinogen decarboxylase [Oryza sativa Japonica
Group]
gi|113533141|dbj|BAF05524.1| Os01g0622300 [Oryza sativa Japonica Group]
gi|215741143|dbj|BAG97638.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618875|gb|EEE55007.1| hypothetical protein OsJ_02650 [Oryza sativa Japonica Group]
Length = 402
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 186/335 (55%), Gaps = 14/335 (4%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ EY+ + K+ +F + T E VE+TLQP R + D ILFSDIL
Sbjct: 61 PPAWMMRQAGRYMAEYQALAKRHPSFRERSETTELIVEITLQPWRAFAPDGVILFSDILT 120
Query: 80 IADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G +++GP + P+ ++E + L P ID L + +S+ ILR ++
Sbjct: 121 PLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTP-IDF--EKLRFVGESLKILRTEIDGQ 177
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
L+GF GAPWT+A+Y++ GG + + + LL L+D +EY+I Q++
Sbjct: 178 AALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLADAISEYIIYQVN 237
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G IQIFD+ G L H +E ++ + +I++ ++ + PN + + G G +L+
Sbjct: 238 SGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPNVPLVLYINGNGGLLE--- 294
Query: 258 RLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
R+TD+ + IGLDW+V ++ L + VQGN+DP L V+ D ++ ++ G
Sbjct: 295 RMTDTGVDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPLPVLTDEIHRVVKSAGP 354
Query: 315 GPFIFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 355 KGHILNLGHGVLVKTPEEAVAHFFDVTRSLRYDTL 389
>gi|114556198|ref|XP_001154132.1| PREDICTED: similar to Chain A, Phe232leu Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 2 [Pan
troglodytes]
Length = 321
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 170/340 (50%), Gaps = 45/340 (13%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG +I D H +A + +
Sbjct: 194 ILTDALVPYLVGQVAAGAQIIFAKDGH-----------FALEELAQ-------------- 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
AGY +GLDW+V A E + K +QGNLDP L + +
Sbjct: 229 ------AGY-----------EVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEI 271
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 GQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 311
>gi|300772175|ref|ZP_07082045.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33861]
gi|300760478|gb|EFK57304.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33861]
Length = 345
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 193/338 (57%), Gaps = 18/338 (5%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G PP+W+MRQAGRY+PEY +I+ K+ FL+MC TPE ++T+ P+ + DAAIL
Sbjct: 16 GQQTERPPVWMMRQAGRYMPEYWEIKNKY-TFLEMCKTPEIAADVTMLPVDLLDIDAAIL 74
Query: 74 FSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILR 131
FSDILV +A+G ++ F + GPR +P+ ++ LN L Y + +I +++
Sbjct: 75 FSDILVTPEAMGGDLSFEQGVGPRFSNPVRNWEDAEKLNAQSADRLQY---VADAIKVIQ 131
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
++L I LIGF GAP+T+ SY++ G +D + + + +++L ++D++ +Y
Sbjct: 132 ERLNGSIPLIGFAGAPFTILSYLVEGKSSRDFKLTKTLLNNDPKLAHYILQKITDLTVDY 191
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
L QI AGV+ +Q+FD+ A L +++ + +IIS + R+ + ISFA+G+
Sbjct: 192 LNMQIAAGVNAVQLFDSWAMALTWNDYIEFGHAYTQQIISRINRE--SIPVISFARGSSV 249
Query: 252 MLKNYRRLTDS--NAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
Y ++++ + I LDW+ L+ L KE VQGN DP+ L V+ ++ +
Sbjct: 250 F---YPIMSEAKPDVISLDWNADILNVKNNLPKEIAVQGNFDPIILYADKPVIRKKIHEL 306
Query: 309 LDVL-GSGPFIFNLGHGITPQV---DPKNVLDLVKTVR 342
+ + G F+FNLGHGI P + K +D++K R
Sbjct: 307 FERMRGQDGFLFNLGHGIMPDMPFDHVKYTVDVIKEFR 344
>gi|118466726|ref|YP_882750.1| uroporphyrinogen decarboxylase [Mycobacterium avium 104]
gi|171472973|sp|A0QIL2|DCUP_MYCA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118168013|gb|ABK68910.1| uroporphyrinogen decarboxylase [Mycobacterium avium 104]
Length = 357
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+RR++ DAAILFSDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVRRHDVDAAILFSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+ T ++ + P L + PI ++ +L L +
Sbjct: 88 LLGAGIDLDIVAGVGPVIASPVRTAADVAAMKP---LERQRVQPIADAVRLLVSAL-GEV 143
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + + +++ L++ L+D++ +L Q+ A
Sbjct: 144 PLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPESWHTLMEKLTDITVGFLRVQLDA 203
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKF-ISFAKGAGYMLKNY 256
GVD +Q+FD+ AG L + +Y R+ +A+ P F + A+ G M
Sbjct: 204 GVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADYGVPMTHFGVGTAELLGAMSAAL 263
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ + +G+DW L+ A G +QGNLDP+ L+ G V+ A++D
Sbjct: 264 KP-APATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWPVVETAARAVVDDGRRA 322
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 323 VDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|145224500|ref|YP_001135178.1| uroporphyrinogen decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|189083011|sp|A4TCS1|DCUP_MYCGI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145216986|gb|ABP46390.1| uroporphyrinogen decarboxylase [Mycobacterium gilvum PYR-GCK]
Length = 354
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 188/358 (52%), Gaps = 24/358 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W+MRQAGR LPEYR++R K + C+ +
Sbjct: 1 MNTRRELPESPYLAAAAGRKPHRVPVWMMRQAGRSLPEYRELRAK-NTMMQACFDADLIT 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNID 114
E+TLQP+RR+ DAAILFSDI+V A G ++ V + GP + PI T ++ ++P
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAHPIRTAADVATVSP--- 116
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + P+ +I L L + LIGF GAP+T+ASY+I GG ++H + + +
Sbjct: 117 LRRETVAPVATAIGQLTAAL-GDVALIGFAGAPFTLASYLIEGGPSRNHERTKAMMLGET 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+N L+ L+DV+ E+L Q+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 176 ETWNALMAALTDVTIEFLRVQLDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFEALA 235
Query: 235 R-KYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDP 291
P F + A+ G M + +G+DW L+ A + G +QGNLDP
Sbjct: 236 GYGVPMTHFGVGTAELLGAMSEAVSGHGVPAVVGVDWRTSLTDAAARVRPGCALQGNLDP 295
Query: 292 MRLVVG--------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ L+ G V+ DG A+ D +G +FNLGHG+ P DP + D V V
Sbjct: 296 VVLLAGWPVVERAVRAVVEDGRRAV-DAGATG-HVFNLGHGVLPATDPAIITDAVALV 351
>gi|295835902|ref|ZP_06822835.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB74]
gi|295825769|gb|EFG64469.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB74]
Length = 352
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 177/327 (54%), Gaps = 16/327 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY + R+ L+ C PE E+T+QP+RR+ DAA+ +SDI+V
Sbjct: 30 PVWFMRQAGRSLPEYLKAREGIP-MLESCARPELVAEITMQPVRRHEVDAAVYYSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + DPI T+ ++ L P + ++Y + +++ +L +L
Sbjct: 89 LKAIGVDLDIKPGVGPVIADPIRTEADLARLRPLVPEDVSY---VTEAVGLLTAEL-GAT 144
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + LLD L+D++ +L QI A
Sbjct: 145 PLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGRPELWARLLDRLADITTGFLEVQIEA 204
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ Y + ++ +AV + F G G +L +
Sbjct: 205 GASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--GVPRVHFGVGTGELLHDLGE 262
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
++ +G+DW VPL A ++ GP +QGNLDP L + + +LD G
Sbjct: 263 -AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFADEAAIREKTTEVLDAARGL 319
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P DP + DLV V
Sbjct: 320 EGHIFNLGHGVLPTTDPGVLTDLVADV 346
>gi|184200495|ref|YP_001854702.1| uroporphyrinogen decarboxylase [Kocuria rhizophila DC2201]
gi|183580725|dbj|BAG29196.1| uroporphyrinogen decarboxylase [Kocuria rhizophila DC2201]
Length = 407
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ L+G P+W MRQAGR LPEYR R+ L+ C TP E+TLQP+R
Sbjct: 70 QSPLIRTLRGLPAAHRPVWFMRQAGRSLPEYRAAREG-TGMLEACLTPALAAEITLQPVR 128
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V G V V GP ++ P+ T P +L + L P+
Sbjct: 129 RHGVDAAIFFSDIVVPMKLAGVGVDIVAGRGPVLEHPVRTAADVAALP--ELPDSALDPV 186
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ +L LIGF GAP+T+A+Y + GG +DH + R + + A++ L +
Sbjct: 187 REAVARTVAEL-GETPLIGFAGAPFTIAAYAVEGGPSRDHLRPRTMMHADPAAWDALAQW 245
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ S +L AQ+ AG +Q+FD+ AG L ++E + R + + AV I
Sbjct: 246 AARTSGAFLRAQVEAGASAVQLFDSWAGSLSLGDYEAHVQRHSAQALGAVADL--GVPRI 303
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L R ++A+G+D+ +PL A L VQGN+DP L +V+
Sbjct: 304 HFGTGTGELLVAMRE-AGADAVGVDYRIPLDEASRRLGGRTVVQGNIDPALLPAPREVLH 362
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V +L + P + NLGHG+ P DP+ + +LV + E
Sbjct: 363 EHVRDVLRRGSAAPGHVVNLGHGVPPDTDPRVLSELVTFIHKE 405
>gi|123965883|ref|YP_001010964.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9515]
gi|166234270|sp|A2BVP6|DCUP_PROM5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123200249|gb|ABM71857.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9515]
Length = 346
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + ++++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDL 115
QP + + D ILFSDIL +G N +E++GP ++ PI + + L P+ L
Sbjct: 61 QPFKAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIENPIKNIHQIENLKELVPSESL 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 SF-----VGEVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPD 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+
Sbjct: 176 LLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKE 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
KYP I + G+ +L+ R T + I LDW+V + A + EG +QGN+DP L
Sbjct: 236 KYPETPIILYISGSAGLLERMAR-TGVDIISLDWTVDIEEACKRIPEGIGIQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + + ++ + +I NLGHGI P +N
Sbjct: 295 FGNKESIKERIDITFNKSKGRKYILNLGHGILPGTPEENA 334
>gi|75908009|ref|YP_322305.1| uroporphyrinogen decarboxylase [Anabaena variabilis ATCC 29413]
gi|123758850|sp|Q3MC76|DCUP_ANAVT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|75701734|gb|ABA21410.1| uroporphyrinogen decarboxylase [Anabaena variabilis ATCC 29413]
Length = 350
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 184/339 (54%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP + +
Sbjct: 10 LLRAARGEIVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWKAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDI+ LG + E +GP + PI TQ +I L P L LP +
Sbjct: 70 PDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRP---LEPEAALPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ + T++GF GAPWT+A+Y + G K + + A+ + LL L
Sbjct: 127 TILQALRQEVGHQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNLAFSEPAILHQLLTKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y QI +G V+Q+FD+ AG L +++ +A R+ +++ +P+ I
Sbjct: 187 ADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
G+ +L+ + + ++ + +DW+V ++ A L K+ VQGNLDP L Q + D
Sbjct: 247 LVSGSAGVLERMGQ-SGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYASKQFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHG+ P +NV +T +
Sbjct: 306 RIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAK 344
>gi|295702762|ref|YP_003595837.1| uroporphyrinogen decarboxylase [Bacillus megaterium DSM 319]
gi|294800421|gb|ADF37487.1| uroporphyrinogen decarboxylase [Bacillus megaterium DSM 319]
Length = 347
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 187/336 (55%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y
Sbjct: 11 LKACRGEKTDHVPVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPELGAYVTRLPVEQYGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ ++G +V GP + +PI + +++ + P D+ Y+L
Sbjct: 70 DAAILYKDIMSPLPSIGVDVEIKSGIGPVISNPIQSLSDVEKLGEITPEEDV--PYVLDT 127
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + +P LIGF GAP+TVASYMI GG K++ + + F Y +A+ L+D
Sbjct: 128 IKLLTTEQLNVP----LIGFAGAPFTVASYMIEGGPSKNYNKTKAFMYTEPKAWFALMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y AQI AG IQIFD+ G L ++ + + RI +++R K N I
Sbjct: 184 LANMTITYAKAQIDAGAKAIQIFDSWVGALNVADYRYFIKPVMERIFTSLREK--NVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW L A L +QGNLDP L+ +V+ +
Sbjct: 242 MFGVGASHLAKEWHDLP-LDVVGLDWRTQLDEARALGLTKTLQGNLDPAILLAPWEVIEE 300
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD + P +IFNLGHG+ PQV P+ + L
Sbjct: 301 RVTEILDKGMASPGYIFNLGHGVFPQVQPETLKRLT 336
>gi|317128191|ref|YP_004094473.1| uroporphyrinogen decarboxylase [Bacillus cellulosilyticus DSM 2522]
gi|315473139|gb|ADU29742.1| uroporphyrinogen decarboxylase [Bacillus cellulosilyticus DSM 2522]
Length = 351
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 188/347 (54%), Gaps = 20/347 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ + ++ P+W MRQAGR PEYR+++KK+ + ++ + PE +T P+ +YN
Sbjct: 12 LKACKKEAVDHVPVWYMRQAGRSQPEYRELKKKY-SLEEITHRPETCAYVTKLPVDQYNN 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V+ GP + +PI + + + P D+ +
Sbjct: 71 DAAILYKDIMTPLPAIGVDVKIKSGIGPVISNPIESIKDVSNLGEITPEKDVDF-----V 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I ILR +L + LI F GAP+T+ASYMI GG K++ Q + F Y A+ L+D
Sbjct: 126 LETIKILRGQL--EVPLISFSGAPFTLASYMIEGGPSKNYNQTKSFMYSQKEAWFLLMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++ Y+ AQI AG IQIFD+ G L + ++ + + RI + ++ + + I
Sbjct: 184 LASMTISYVKAQIKAGAQAIQIFDSWVGALNQEDYRTFVKPVMHRIFTELKGE--DVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ ++ L + +GLDW P+ A E VQGNLDP L+ V+ +
Sbjct: 242 MFGVGARHLTSDWHDLP-LDVVGLDWRYPIKEARENGITKAVQGNLDPSVLMAPWNVIEE 300
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDP---KNVLDLVKTVRSEKI 346
I+D P FIFNLGHG+ P++ P K + V +EK+
Sbjct: 301 KAKEIIDEGMKQPGFIFNLGHGVFPEIQPATLKRLTSFVHEYSAEKM 347
>gi|260578849|ref|ZP_05846755.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium ATCC
43734]
gi|258602996|gb|EEW16267.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium ATCC
43734]
Length = 396
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 180/350 (51%), Gaps = 31/350 (8%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W+MRQAGR LPEYR+IRK + L+ C+ PE E+TLQP+RR++
Sbjct: 44 LAAARGETPSRRPVWMMRQAGRSLPEYREIRKDY-GMLESCFNPELLAEITLQPVRRHDA 102
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V A G ++ V GP ++ P+ T E P ++ + L I + I
Sbjct: 103 DAAILFSDIVVPLKAAGVDLDIVAGRGPVVEHPVRTAEEAAALPIVES--SQLDSIVEGI 160
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ + L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+ L+
Sbjct: 161 GGVLQGLRDDQVLIGFAGAPFTLASYLVEGGPSKNHEVTKALMYSQPDVWHALMRRLTPT 220
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+L Q+ AGVD +Q+FD+ AG L ++ + +I A+R I F
Sbjct: 221 IIRFLQVQVEAGVDALQLFDSWAGYLTARDYREFVRPYSTQIFDAMRAY--GIPMIHFGV 278
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFA-----LELQKEGP----------VQGNLDPM 292
G G +L + L + +G+DW VPL A LQ+ P +QGNLDP
Sbjct: 279 GTGELLGDM-ALAGPDVVGVDWRVPLDSAATRVSAALQEADPAAEPTARAKALQGNLDPA 337
Query: 293 RLVVGNQVM--------IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L G +V+ + AI G IFNLGHG+ P DP +
Sbjct: 338 VLFAGPEVVETQIARICAEADRAIERGQARG-HIFNLGHGVLPNTDPDAI 386
>gi|319892865|ref|YP_004149740.1| Uroporphyrinogen III decarboxylase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162561|gb|ADV06104.1| Uroporphyrinogen III decarboxylase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464103|gb|ADX76256.1| uroporphyrinogen decarboxylase [Staphylococcus pseudintermedius
ED99]
Length = 344
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 194/345 (56%), Gaps = 16/345 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL ++G V++ P+W MRQAGR PEYR++++K+ F D+ + PE +T P+
Sbjct: 5 KNDTILRAIKGEVVSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTALPV 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI----TTQEIYLLNPNIDLFLN 118
+Y+ DAA+L+ DI+ ++G +V GP + +PI + + ++P D+
Sbjct: 64 EQYDTDAAVLYKDIMTPLKSIGVDVDIKSGIGPVIANPIRQMSDVEALGQIDPERDVPY- 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ Q + Y + +
Sbjct: 123 ----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNQTKALMYSDEATWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D+S Y+ AQ+ AG +IQ+FD+ G L + +++ Y + ++I+ ++
Sbjct: 178 KLMDVLTDMSIRYVGAQVKAGAQLIQVFDSWVGALNQPDYDYYIKPCMEKLITGIKAY-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++++++ L + +GLDW ++ A +QGNLDP L+
Sbjct: 236 NVPVIMFGVGASHLIESWNALP-IDVLGLDWRTSINEARAKGVSKALQGNLDPSILLAPW 294
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+V+ + ILD + G IFNLGHG+ P+V P+ + + + V
Sbjct: 295 EVIEARLKPILDQGVAHGRHIFNLGHGVFPEVKPETLKHVAQFVH 339
>gi|315444831|ref|YP_004077710.1| uroporphyrinogen decarboxylase [Mycobacterium sp. Spyr1]
gi|315263134|gb|ADT99875.1| uroporphyrinogen decarboxylase [Mycobacterium sp. Spyr1]
Length = 360
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/358 (35%), Positives = 188/358 (52%), Gaps = 24/358 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W+MRQAGR LPEYR++R K + C+ +
Sbjct: 7 MNTRRELPESPYLAAAAGRKPHRVPVWMMRQAGRSLPEYRELRAK-NTMMQACFDADLIT 65
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNID 114
E+TLQP+RR+ DAAILFSDI+V A G ++ V + GP + PI T ++ ++P
Sbjct: 66 EITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAHPIRTAADVATVSP--- 122
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + P+ +I L L + LIGF GAP+T+ASY+I GG ++H + + +
Sbjct: 123 LRRETVAPVATAIGQLTAAL-GDVALIGFAGAPFTLASYLIEGGPSRNHERTKAMMLGET 181
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+N L+ L+DV+ E+L Q+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 182 ETWNALMAALTDVTIEFLRVQLDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFEALA 241
Query: 235 R-KYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDP 291
P F + A+ G M + +G+DW L+ A + G +QGNLDP
Sbjct: 242 GYGVPMTHFGVGTAELLGAMSEAVSGHGVPAVVGVDWRTSLTDAAARVRPGCALQGNLDP 301
Query: 292 MRLVVG--------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ L+ G V+ DG A+ D +G +FNLGHG+ P DP + D V V
Sbjct: 302 VVLLAGWPVVERAVRAVVEDGRRAV-DAGATG-HVFNLGHGVLPATDPAIITDAVALV 357
>gi|297573433|gb|ADI46567.1| uroporphyrinogen decarboxylase [Vaucheria litorea]
Length = 342
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 183/340 (53%), Gaps = 9/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP RRY
Sbjct: 5 LLRAARGEAVERVPVWMMRQAGRHMQEYRDLVKKYPTFRERSEIHEVSTEISLQPYRRYG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP-IFQS 126
D ILFSDIL +G + + E GP++ P+ T E ID P + Q+
Sbjct: 65 TDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTID--SEKACPFVGQT 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L ++D
Sbjct: 123 LRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIAD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I +
Sbjct: 183 SIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPIIIYI 242
Query: 247 KGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+G +L+ R++ S A I LDW+V + A + + + +QGNLDP L N+V+ +
Sbjct: 243 NKSGALLE---RMSQSGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIKE 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL G + NLGHGI + + TV++
Sbjct: 300 RTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKN 339
>gi|330684758|gb|EGG96453.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU121]
Length = 345
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 193/340 (56%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++ + IL++++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 2 VHTKNDTILKMIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ YN DAAIL+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 61 LPVDNYNTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIQNPIKSVQDVEKLSQIDPKRDV 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I IL ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 121 PY-----VLDTIKILTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNLTKAMMYRDEA 174
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L +S +Y+ AQI AG +++QIFD+ G L ++ Y + ++++ ++R
Sbjct: 175 TWFALMDHLVAISIDYVNAQIEAGAELVQIFDSWVGALNVQDYRKYIKPGMDKLVNGIKR 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++ I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 235 QH-QVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSIQQAQQMGVNKTLQGNLDPSLLL 292
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
+V+ + + ILD + G IFNLGHG+ P+V P+ +
Sbjct: 293 APWEVIEERLKDILDQGMSRGKHIFNLGHGVFPEVQPETL 332
>gi|283777967|ref|YP_003368722.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
gi|283436420|gb|ADB14862.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
Length = 641
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 178/341 (52%), Gaps = 19/341 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+WLMRQAGRY+ EYR +R + FLD+C P E+ ++R
Sbjct: 306 LKACRGEPTDVTPVWLMRQAGRYMEEYRAVRGQV-TFLDLCKNPSLCSEIMCTAVKRLGV 364
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-----LNYLLP 122
DAAI+FSD+L I + +G ++ F + EGP + +P+ T ++D L L
Sbjct: 365 DAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPLKTAA------DVDRVKELEELGSLDF 418
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ R LP + LIGF G+P+T+ASY I GG +++ + Y + A+ L+
Sbjct: 419 VFETVRQTRADLPEDMPLIGFAGSPFTLASYAIEGGSSRNYLTTKSLMYSDEGAWTALMQ 478
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
LS YL AQI +G V+Q+FD+ GCLG +++ Y V II + P
Sbjct: 479 KLSRSITRYLNAQIASGAQVVQLFDSWVGCLGPYDYRRYVLPHVASIIDGI---TPGVPV 535
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I+FA G +L IG+DW V L+ A + + + VQGNLDP+ L+ +
Sbjct: 536 INFATGNPALLPLLAE-AGGRVIGVDWRVSLADAWKTVGYDRSVQGNLDPITLLGPRDEL 594
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V +LD G IFNLGHG+ Q N + +V V
Sbjct: 595 KRRVKLVLDEAAGRAGHIFNLGHGVLQQTPVDNAIAVVDFV 635
>gi|67524551|ref|XP_660337.1| hypothetical protein AN2733.2 [Aspergillus nidulans FGSC A4]
gi|40743845|gb|EAA63031.1| hypothetical protein AN2733.2 [Aspergillus nidulans FGSC A4]
Length = 378
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 185/337 (54%), Gaps = 26/337 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G+ ++ PPIW+MRQAGRYLPEY + + ++F + C PE +T+QP+ RY
Sbjct: 12 LLRAAWGDKVHRPPIWVMRQAGRYLPEYHEAKGN-RDFFECCRDPEIASTITIQPVDRYE 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLFLN 118
DAAI+FSDILVI A+G V V+ +GP +P+ + +++ + ++ L+
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLRSPTDGQYEKVMARDVDVKAELD 130
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q + + Y+ +
Sbjct: 131 Y---VYKAITLTRTKLNGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPKESQ 187
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + R+
Sbjct: 188 ALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFQDFSLPYLRHISANLPRRLK 247
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L++ L +S N +GLDW + A ++ +QGN D
Sbjct: 248 EMGLEPVPMTVFAKGAWYALED---LCESGYNVVGLDWLHDPAEAFKIANGRVTIQGNAD 304
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGI 325
P L G + + V ++ G +I NLGHG+
Sbjct: 305 PGVLYGGREAIKQAVETMVAGFKKGKQGWIANLGHGM 341
>gi|119513565|ref|ZP_01632581.1| uroporphyrinogen decarboxylase [Nodularia spumigena CCY9414]
gi|119461779|gb|EAW42800.1| uroporphyrinogen decarboxylase [Nodularia spumigena CCY9414]
Length = 351
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 184/342 (53%), Gaps = 8/342 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP R +
Sbjct: 10 LLRAARGEVVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWRAFA 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D ILFSDI+ LG + E +GP ++ P+ +QE I L P L LP +
Sbjct: 70 PDGVILFSDIVTPLPGLGIEMDIAEGKGPIINSPLRSQEQIDRLRP---LEPEASLPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y + G K + + A+ + + LL
Sbjct: 127 TILQALRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSVIKNMAFSDPTILHQLLGKF 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y QI G V+Q+FD+ AG L +++ +A R+ V++ +P+ I
Sbjct: 187 ADAIAVYARYQIDCGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
G+ +L+ + + ++ + +DW+V ++ A L K VQGNLDP L + D
Sbjct: 247 LVSGSAGVLERMPK-SGADIVTVDWAVDMAEARARLGKHVKVQGNLDPGVLFGSQDFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + G+ I NLGHG+ P+ +NV +T + K
Sbjct: 306 RILDTVHKAGNWGHILNLGHGVLPETPEENVAFFFETAKQLK 347
>gi|226306334|ref|YP_002766294.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis PR4]
gi|259645155|sp|C0ZYX0|DCUP_RHOE4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226185451|dbj|BAH33555.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis PR4]
Length = 355
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 182/348 (52%), Gaps = 23/348 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G + P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+RR++
Sbjct: 18 LLAAATGRTPSRRPVWFMRQAGRSLPEYREIRAGI-GMLESCFDPALVCEITMQPVRRHD 76
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + +PI + P L + I Q+
Sbjct: 77 VDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPIRSIADVAALPR--LVPEEVGAIAQA 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL L+D
Sbjct: 135 VRLLTTEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHEKTKALMHSDPKTWHALLGSLAD 193
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +L Q+ AGVD +Q+FD+ AG L ++ + R+ + V I F
Sbjct: 194 TTICFLQTQLKAGVDAVQLFDSWAGALSLADYREFVLPHSERVFAEV--AAAGVPRIHFG 251
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVM-- 301
G G +L ++ +G+DW +PL A + GP +QGNLDP L G +V+
Sbjct: 252 VGTGELLGAMGE-AGADVVGVDWRIPLDVA--AGRVGPGKALQGNLDPAVLFAGPEVIDR 308
Query: 302 ------IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+G AI G+ IFNLGHG+ P DP + V+ V S
Sbjct: 309 EVRRIAAEGDRAI--EAGAIGHIFNLGHGVLPDTDPTAITSAVELVHS 354
>gi|159487233|ref|XP_001701638.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
gi|158280857|gb|EDP06613.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
Length = 394
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 178/337 (52%), Gaps = 8/337 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P W+MRQAGRY YR++ KK +F + T E VE++LQP +
Sbjct: 51 MVRAARGEKVERAPCWMMRQAGRYQKSYRELAKKHPSFRERSETTELIVEISLQPWNSFK 110
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL +G N +N+GP +D PI T E +D + + + ++
Sbjct: 111 PDGVILFSDILTPLPGIGVNFDIDDNKGPIIDTPIRTLEQVKQLHAMDF--SKVDFVGRA 168
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ LR ++ N ++GF G+PWT+A+Y+I GG + + + + LL L+D
Sbjct: 169 LTQLRSEVNNQAAVLGFVGSPWTLATYLIEGGSTSLYKTIKTMCFSAPEVLDALLSKLAD 228
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
AEY+ QI AG +QIFD+ G L E+E ++ + RII++V+ +YP +A
Sbjct: 229 AMAEYIKYQIRAGAQCVQIFDSWGGQLPPREWEKWSGPYLKRIIASVKAEYPTVPLTLYA 288
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G+G +L+ T ++ IG+DW+ ++ A + VQGN+DP L + + D V
Sbjct: 289 NGSGGLLERL-ATTGADVIGVDWTTDMADARRRIPSTQSVQGNVDPAILFASHDAIEDAV 347
Query: 306 NAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVK 339
L G I NLGHG+ TP+ ++ DL K
Sbjct: 348 RDCLRKGGGQRHILNLGHGVLVGTPEEGVAHMFDLSK 384
>gi|111221536|ref|YP_712330.1| uroporphyrinogen decarboxylase [Frankia alni ACN14a]
gi|111149068|emb|CAJ60750.1| uroporphyrinogen decarboxylase (partial match) [Frankia alni
ACN14a]
Length = 452
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 178/335 (53%), Gaps = 32/335 (9%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R LD C P E+T+QP+RR+ DAAI FSDI+V
Sbjct: 134 PVWFMRQAGRVLPEYRALRADVP-MLDSCRDPAMITEITMQPVRRFRPDAAIFFSDIVVP 192
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G ++ V GP + D + L P+ ++ Q++ L +L
Sbjct: 193 LVAIGLDIDIVAGVGPVVAEPVRDSARLAALRALEPDDVPYVT------QAVRDLLGEL- 245
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAP+T+ASY++ GG ++H + + Y ++ LLD L+ ++ +L Q
Sbjct: 246 GGTPLIGFAGAPFTLASYLVEGGPSRNHLRTKAMMYGEPELWHELLDRLATITTAFLRVQ 305
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AGVD +Q+FD+ AG L E ++ Y A R+++A + P I F G +L
Sbjct: 306 VDAGVDAVQLFDSWAGALSEDDYRRYVAPHSARVLAAFAGEVPR---IHFGVNTGELLAA 362
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL 312
++ ++ +G+DW VPL A ++ GP VQGNLDP + V+ V DVL
Sbjct: 363 MGQVG-ADVVGVDWRVPLDEAA--RRIGPGRAVQGNLDPAAVFAPEPVLAAKVG---DVL 416
Query: 313 GSGP----FIFNLGHGITPQVDP---KNVLDLVKT 340
G +FNLGHG+ P+ DP +++DLV
Sbjct: 417 ARGAKAEGHVFNLGHGVLPETDPGVLAHIVDLVHA 451
>gi|297573435|gb|ADI46568.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 342
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 183/340 (53%), Gaps = 9/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP RRY
Sbjct: 5 LLRAARGEAVERVPVWMMRQAGRHMQEYRDLIKKYPTFRERSEIHEVSTEISLQPYRRYG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP-IFQS 126
D ILFSDIL +G + + E GP++ P+ T E ID P + Q+
Sbjct: 65 TDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTID--SEKACPFVGQT 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L ++D
Sbjct: 123 LRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIAD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I +
Sbjct: 183 SIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPIIIYI 242
Query: 247 KGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+G +L+ R++ S A I LDW+V + A + + + +QGNLDP L N+V+ +
Sbjct: 243 NKSGALLE---RMSQSGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIKE 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL G + NLGHGI + + TV++
Sbjct: 300 RTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKN 339
>gi|157114047|ref|XP_001657957.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877461|gb|EAT41686.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 325
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 182/327 (55%), Gaps = 14/327 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE++++R K +F ++C TPE E+T+QP+RR++ DA+I+FSDILVI AL
Sbjct: 1 MRQAGRYLPEFQEVRAKH-DFFEVCRTPELACEVTMQPLRRFDLDASIIFSDILVIPQAL 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V + GP + P+ T + L N ++ L + +I+++R L + L GF
Sbjct: 60 GITVEMHKGVGPVLPQPLVTPD-DLERLNTTGSIDRLKYVGDAITMMRHMLDGKVPLYGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ YMI GG K + + + A LL+ L+D +YL+ Q+ AG ++
Sbjct: 119 TGAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLNLLTDQIVDYLLMQVKAGAQIL 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS-----FAKGAGYMLKNYRR 258
Q+F++ A L + ++ N A + RI + +K+ F+KGA + L +
Sbjct: 179 QVFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGVTPVPMTLFSKGAMHSLTEQAQ 238
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
T + IGLDW++ A +L GP +QGNLDP + + + + V ++ G
Sbjct: 239 -TGYDVIGLDWTIDPEEARKLA--GPNVTLQGNLDPQDMYKSPEELRELVLTMVRKFGKH 295
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+I NLGHGITPQ +++ LV+ V
Sbjct: 296 RYIANLGHGITPQTPVESMSVLVQAVH 322
>gi|57867299|ref|YP_188937.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis RP62A]
gi|71153330|sp|Q5HNA4|DCUP_STAEQ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|57637957|gb|AAW54745.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis RP62A]
gi|329734310|gb|EGG70625.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU045]
gi|329737388|gb|EGG73642.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU028]
Length = 344
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T + + ++P D+
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 174 TWFALMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 234 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 292 APWDVIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHN 340
>gi|323358309|ref|YP_004224705.1| uroporphyrinogen-III decarboxylase [Microbacterium testaceum
StLB037]
gi|323274680|dbj|BAJ74825.1| uroporphyrinogen-III decarboxylase [Microbacterium testaceum
StLB037]
Length = 354
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 177/349 (50%), Gaps = 21/349 (6%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L L+G+ P+W MRQAGR LPEYR++R + LD C TP E+TL
Sbjct: 1 MATPDAPLLRALRGDRPERQPVWFMRQAGRSLPEYRELRVGTR-MLDACLTPHLAAEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL--FL 117
QPIRR++ DAAI FSDI+V G +V GP DP+ T + ID
Sbjct: 60 QPIRRHDVDAAIFFSDIVVPLRLAGVDVVIEPGRGPVFADPVRTADDVARITAIDPADVA 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
P+ ++ ++ +L + + LIGF GAP+T+A+Y++ GG K+H + R + + ++
Sbjct: 120 AAAEPVREAARLVTAELDDAVPLIGFAGAPFTLAAYLVEGGPSKEHLRARGMMHADPESW 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L +LS VS +L AQI G +Q+FD+ AG L F + A + +
Sbjct: 180 HRLAGWLSRVSRAFLDAQIEGGAQAVQLFDSWAGSLSPATFREFIAPHSRAALEGI---- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRL 294
I F G G L + R ++A+G+DW +PL A L GP +QGNLDP L
Sbjct: 236 -EVPRIHFGVGTGAFLDDMRLSGLADAVGVDWRMPLDEAAALV--GPDVTLQGNLDPALL 292
Query: 295 VVGNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVK 339
V+ V+ DVL G I NLGHG+ P DP + +V
Sbjct: 293 GAPWPVLAAHVD---DVLARGRAARAHILNLGHGVPPDTDPDVLTRIVA 338
>gi|296122534|ref|YP_003630312.1| uroporphyrinogen decarboxylase [Planctomyces limnophilus DSM 3776]
gi|296014874|gb|ADG68113.1| uroporphyrinogen decarboxylase [Planctomyces limnophilus DSM 3776]
Length = 347
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 186/339 (54%), Gaps = 9/339 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ + ++ + PIW+MRQAGRYLPEY +R K FL++C TP E+TL
Sbjct: 9 SRFMRAVRREATDTTPIWIMRQAGRYLPEYMAVRSKV-TFLELCETPALAAEVTLTAREV 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAILF+D+L + +G ++ + + EGP + +P+ E ++ L+ L ++
Sbjct: 68 LDVDAAILFADLLPMLRPMGIDLEYAKGEGPVIHNPLRAPEDLQRFRELE-DLSSLGFVY 126
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I ++RK LP +I L+GF GAP+T+ASY++ GG +++ + + Y + ++ L+ L
Sbjct: 127 DAIRLIRKDLPGNIPLLGFAGAPFTLASYVLEGGGSRNYLHTKRWMYNHPEEWHELMGRL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
S YL+AQ AG +QIFD+ AGCL ++ + +I R P+ I+
Sbjct: 187 SRTIVRYLLAQAAAGCQAVQIFDSWAGCLSPSDYREFVLPHTKAVI---RELMPHVAVIN 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGNQVMID 303
F G +L + + +G+DW + +L + +QGNLDP+ L ++
Sbjct: 244 FMTGNPALLA-MQNEAGGSLLGIDWRHDIGDVWKLVGDSKGIQGNLDPLVLEADLPILKA 302
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+AIL+ G +FNLGHG+ P+VDP+ V +LV+ V
Sbjct: 303 KADAILEASRGHRGHVFNLGHGVYPEVDPEKVKELVRHV 341
>gi|258651776|ref|YP_003200932.1| uroporphyrinogen decarboxylase [Nakamurella multipartita DSM 44233]
gi|258555001|gb|ACV77943.1| uroporphyrinogen decarboxylase [Nakamurella multipartita DSM 44233]
Length = 372
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 178/326 (54%), Gaps = 10/326 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 51 PVWFMRQAGRSLPEYREVRRGI-GMLESCLMPELAAEITLQPVRRHGVDAAILFSDIVVP 109
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V+ V GP + PI T P +D + L P+ + + +L
Sbjct: 110 LKLAGIDVQIVAGTGPVVAAPIRTAADVAALPTLDP--DALAPVAAEAAGVVAEL-GSTP 166
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG +DH + + + ++ LL +++ V+ +L AQI AG
Sbjct: 167 LIGFAGAPFTLASYLVEGGPSRDHRLTKTLMHAEPQVWHALLTWVAGVTGAFLRAQILAG 226
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+Q+FD+ AG L ++E + A + +AV P + + F G G +L R +
Sbjct: 227 ASAVQVFDSWAGALSRPDYERFVAPHSAAVFAAV-ADLPVPR-VHFGVGTGELLTAMRDV 284
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
++ +G+D +PL A + L PVQGN+DP L G Q + ++ + P
Sbjct: 285 -GADVVGIDHRIPLDEASDRLGGATPVQGNIDPALLFAGRQALHAHAEDVIRRGRAAPGH 343
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P DP + +LV+ V S
Sbjct: 344 VVNLGHGVPPDTDPDVLTELVEFVHS 369
>gi|242374083|ref|ZP_04819657.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W1]
gi|242348208|gb|EES39810.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W1]
Length = 344
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MHSKNDTILKTIKGETTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTQ 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI + +++ ++P D+
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVDIKSGIGPVISNPIKSVQDVEKLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y +
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYSDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S Y++AQI AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 174 TWFALMNHLVDISITYVVAQIEAGAELIQIFDSWVGALNTQDYNYYIKPAMEKLISGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
+ + I F GA +++ + L + +GLDW + A ++ + +QGNLDP L+
Sbjct: 234 HH-DVPVILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADDMGVKKTLQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + ILD + G IFNLGHG+ P+V P+ +
Sbjct: 292 APWDVIETRLKEILDQGMNRGKHIFNLGHGVFPEVKPETL 331
>gi|23098622|ref|NP_692088.1| uroporphyrinogen decarboxylase [Oceanobacillus iheyensis HTE831]
gi|29611766|sp|Q8ERY0|DCUP_OCEIH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|22776849|dbj|BAC13123.1| uroporphyrinogen decarboxylase [Oceanobacillus iheyensis HTE831]
Length = 345
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 186/346 (53%), Gaps = 16/346 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I++ QG + P W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 5 KNDTIIKAYQGEETDYTPAWFMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPV 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI----TTQEIYLLNPNIDLFLN 118
Y DAAIL+ DI+ +G +V GP + +PI +++ ++NP D+
Sbjct: 64 ENYGTDAAILYKDIMSPLPYIGVDVEIKSGIGPVIHNPIRNLQDVEKLGVINPVSDV--P 121
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y+L + ++ + ++P LIGF GAP+T+ASYMI GG K++ + + Y+ +
Sbjct: 122 YVLDTIRLLTEEQLEVP----LIGFSGAPFTLASYMIEGGPSKNYSKTKALMYREPETWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D LSD+ Y+ AQ+ AG IQIFD+ G L ++ + + RI S +RR
Sbjct: 178 ALMDKLSDMIISYVDAQVEAGAKAIQIFDSWVGSLNAEDYRVFIKPVMTRIFSELRRH-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I+F GA ++L + L + IGLDW ++ A E+ VQGNLDP L+
Sbjct: 236 EVPLITFGVGARHLLMEWNDLP-VDVIGLDWRTSINEAREMGVTKVVQGNLDPAILLSDW 294
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q + ILD + SG +FNLGHG+TP ++P + L + V +
Sbjct: 295 QTIEQRTKQILDQGMQSGKHVFNLGHGVTPDIEPATLKKLTELVHN 340
>gi|170783148|ref|YP_001711482.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157718|emb|CAQ02920.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 369
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 184/354 (51%), Gaps = 20/354 (5%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
+N R ++E +G+ P+W MRQAGR LPEYR++R + LD C PE E+
Sbjct: 23 LNTRTSSSLLVEAYRGHRGERAPVWFMRQAGRSLPEYRELRVGTR-MLDACLDPEMASEI 81
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
TLQP+RR++ DA I FSDI++ G V V GP ++ P+ T P++D
Sbjct: 82 TLQPVRRHHVDAGIFFSDIVIPLKLAGVGVDIVAGRGPVLEKPVRTAADVAALPSLDP-- 139
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L PI Q+++ +L LIGF GAP+T+A+Y++ GG KDH R + + A+
Sbjct: 140 AALEPIRQAVARTAAEL-GDTPLIGFAGAPFTLAAYLVEGGPSKDHIAARGLMHADPDAW 198
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR--- 234
+ L+ + ++++ +L AQ+ AG Q+FD+ AG L ++ A + + VR
Sbjct: 199 DALMRWCAEITGVFLHAQVMAGASAAQLFDSWAGGLSLADYTQRVAPASALALDHVRTIT 258
Query: 235 ----RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNL 289
R P + F G G +L + +A+G+DW +PL A L PVQGN+
Sbjct: 259 AADGRTVP---LVHFGVGTGELLGAMHDV-GVDAVGVDWRIPLDEASRRLGGSVPVQGNI 314
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L ++ V +L+ + P + NLGHG+ P+ DP + +V VR
Sbjct: 315 DPALLAAPWPILEAHVRDVLERGKTAPAHVLNLGHGVPPETDPTVLTRIVDLVR 368
>gi|126695947|ref|YP_001090833.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9301]
gi|166234267|sp|A3PBV7|DCUP_PROM0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126542990|gb|ABO17232.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9301]
Length = 346
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G N +E++GP + DPI T + + L+P+ L
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLKELSPSESL 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++ L+K + N T++GF GAPWT+A+Y++ G K++ + A+
Sbjct: 121 SF-----VGEVLTSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNKPD 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+
Sbjct: 176 LLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVEIVKA 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
+YP I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L
Sbjct: 236 EYPETPIILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGIL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + + ++ + + +I NLGHGI P +N
Sbjct: 295 FGNKESIKERIDNTFNKIKDRKYILNLGHGILPGTPEENA 334
>gi|209523447|ref|ZP_03272002.1| uroporphyrinogen decarboxylase [Arthrospira maxima CS-328]
gi|209496189|gb|EDZ96489.1| uroporphyrinogen decarboxylase [Arthrospira maxima CS-328]
Length = 354
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 185/339 (54%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R+++ +F D + VE++LQP R +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKAYRDLREQYPSFRDRSEKTDIAVEISLQPFRAFA 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLNYLLPIF 124
D ILFSDIL +G + VE++GP +D PI TQ +I L+P + L ++ I
Sbjct: 70 PDGVILFSDILTPLPGIGIDFDIVESKGPIIDPPIRTQSQIDQLHPIEPEASLPFIREIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+ LR+++ N ++GF GAPWT+A+Y I G KD+ + A+ + L L
Sbjct: 130 QT---LRREVANKAAVLGFVGAPWTLAAYAIEGKSSKDYTIIKSMAFSEPAMLHQFLGKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A Y QI +G V+Q+FD+ AG L +FE +A +++ V+ K+P+ I
Sbjct: 187 ASAIATYACYQIDSGAQVVQMFDSWAGQLSPQDFETFALPYQQQVVKQVKAKHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A + VQGN+DP L + + D
Sbjct: 247 YINGSAGILERMGK-SGVDLISVDWTVDMAEARNRIGHHLGVQGNIDPCVLFGSKETIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHG+ + +NV +T +
Sbjct: 306 RILETIRKAGNQGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|319401100|gb|EFV89319.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis FRI909]
Length = 344
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVEKLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ +++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 174 TWFAIMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 234 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADKMGVNKAIQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 292 APWDVIESRLKDILNQGLDRGKHIFNLGHGVFPEVKPETLRKVTEFVHN 340
>gi|258512054|ref|YP_003185488.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478780|gb|ACV59099.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 359
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 179/344 (52%), Gaps = 18/344 (5%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L + ++ P+W MRQAGRY PEYRQIR+ + LD+C PE +T P+ +
Sbjct: 11 RFLRACRREPVDRVPVWFMRQAGRYDPEYRQIRETY-TLLDICREPELCARVTRMPVDKL 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLL 121
DAAILFSDI+V A+G + EN GP M+ P+ T E ++ +P + L Y+L
Sbjct: 70 GVDAAILFSDIMVPVGAMGMSFSLQENVGPVMEQPLRTDEDVARLHAFDP--EEALPYVL 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I L K LP + LIGF G P+T+ASYMI GG +D+ + + ++ L+
Sbjct: 128 ---ETIRYLAKALP--VPLIGFAGGPFTLASYMIEGGPSRDYLRTKTMMLARPDLWHALM 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D LS + YL AQI AG +QIFD+ G L H F + V R+++ +
Sbjct: 183 DKLSQAMSRYLRAQIQAGASAVQIFDSWVGSLSVHTFRGHVKPYVQRMLTDLAPL--GVP 240
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F G +L + + +G+DW PL A + + +QGNLDP+ L
Sbjct: 241 VIYFGVHTGELLAEFAE-AGATVVGVDWRTPLDRARQRVGTSVALQGNLDPVSLFAPPDA 299
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +L + P +IFNLGHG+ P D + +V+ V +
Sbjct: 300 LRREVETVLRLGTESPGYIFNLGHGVKPTTDLAQLQRVVEWVHA 343
>gi|320450790|ref|YP_004202886.1| uroporphyrinogen decarboxylase [Thermus scotoductus SA-01]
gi|320150958|gb|ADW22336.1| uroporphyrinogen decarboxylase [Thermus scotoductus SA-01]
Length = 348
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 188/342 (54%), Gaps = 13/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ +G + PP+W MRQAGRY EY++IR+++ ++ PE E+TL P+++
Sbjct: 13 ILQAARGRPTSRPPVWFMRQAGRYQKEYQEIRRRY-TLPEIVQNPEVCAEVTLLPVKQLG 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLNPNIDLFLNYLLP-IF 124
DAAILF+DI +G + VE +GP + PI ++ + L P L +P +
Sbjct: 72 VDAAILFADITTPLYGIGVELDLVEGKGPVIHRPIRDSKGVEALRP---LEPEEAVPFVL 128
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I +L+++L + LIGF GAP+T+ASY+I GG + + + F Y+ ++ LL+ L
Sbjct: 129 ETIRLLKREL--EVPLIGFAGAPFTLASYLIEGGPSRQFKEVKAFMYREEALWHQLLEKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A YL AQ+ AG D++Q+FD+ G L ++ Y + R+ +R I
Sbjct: 187 TQAMARYLKAQVEAGADLLQVFDSWVGALSPADYRRYVKPHMARLFQELRPL--GVPVIH 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G +LK + + +GLD PL +A E + P+QGNLDP+ L +V+
Sbjct: 245 FGVGTMGLLKEMQE-AGGDVMGLDHHTPLPWAREALGQTPIQGNLDPVVLFAPKEVIRRE 303
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL S P IFNLGHGI P ++V +V+ ++ ++
Sbjct: 304 VERILAENASRPGHIFNLGHGILPGTPVEHVRYVVELLKEKE 345
>gi|27468431|ref|NP_765068.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis ATCC
12228]
gi|27315978|gb|AAO05112.1|AE016749_58 uroporphyrinogen decarboxylase [Staphylococcus epidermidis ATCC
12228]
Length = 359
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 16 LRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 74
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T + + ++P D+
Sbjct: 75 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDV 134
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 135 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 188
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 189 TWFALMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 248
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 249 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSILL 306
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G +IFNLGHG+ P+V P+ + + + V +
Sbjct: 307 APWDVIESRLKDILNQGLNRGKYIFNLGHGVFPEVKPETLRKVTEFVHN 355
>gi|256825387|ref|YP_003149347.1| uroporphyrinogen decarboxylase [Kytococcus sedentarius DSM 20547]
gi|256688780|gb|ACV06582.1| uroporphyrinogen decarboxylase [Kytococcus sedentarius DSM 20547]
Length = 369
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 181/329 (55%), Gaps = 14/329 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P+W MRQAGR LPEYR +R+ L+ C TPE E+TLQP+RR++
Sbjct: 34 LVAAARGQEVPHTPVWFMRQAGRSLPEYRALREG-NAMLEACRTPELCTEITLQPVRRHD 92
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI FSDI+V ALG ++ V GP + +P T+ P L + + I +S
Sbjct: 93 VDAAIFFSDIVVPLHALGVDLDIVPGTGPVVAEPFRTRADLDRLPG--LTADMVPDISES 150
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I+ +R L LIGF GAP+T+ASY++ GG K+H + + + + +N + L+
Sbjct: 151 IAAVRSALRPDQALIGFAGAPFTLASYLVEGGPSKNHERTKALMHGDPELWNDFCERLAS 210
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ +L Q+ AG D +Q+FD+ G L +++ + A +++V + P I F
Sbjct: 211 IAGAFLQVQVDAGADAVQLFDSWVGYLNRADYQRFVAPHSAAALASVAGRVPR---IHFG 267
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMID 303
G G +L + + +G+D+ V L+ ALE + G +QGNLDP L ++ ++
Sbjct: 268 VGTGELL-DLMGQAGAEVVGVDYRVDLADALE--RTGGRYALQGNLDPALLFAPDEPLMA 324
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDP 331
V+ I++ P +FNLGHG+ P DP
Sbjct: 325 RVDEIVEAGRVAPGHLFNLGHGVLPSTDP 353
>gi|218188685|gb|EEC71112.1| hypothetical protein OsI_02909 [Oryza sativa Indica Group]
Length = 402
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 186/335 (55%), Gaps = 14/335 (4%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ EY+ + K+ +F + T + VE+TLQP R + D ILFSDIL
Sbjct: 61 PPAWMMRQAGRYMAEYQALAKRHPSFRERSETTDLIVEITLQPWRAFAPDGVILFSDILT 120
Query: 80 IADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G +++GP + P+ ++E + L P ID L + +S+ ILR ++
Sbjct: 121 PLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTP-IDF--EKLRFVGESLKILRTEIDGQ 177
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
L+GF GAPWT+A+Y++ GG + + + LL L+D +EY+I Q++
Sbjct: 178 AALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRGLLSHLADAISEYIIYQVN 237
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G IQIFD+ G L H +E ++ + +I++ ++ + PN + + G G +L+
Sbjct: 238 SGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPNVPLVLYINGNGGLLE--- 294
Query: 258 RLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
R+TD+ + IGLDW+V ++ L + VQGN+DP L V+ D ++ ++ G
Sbjct: 295 RMTDTGVDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPLPVLTDEIHRVVKSAGP 354
Query: 315 GPFIFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 355 KGHILNLGHGVLVKTPEEAVAHFFDVTRSLRYDTL 389
>gi|38258941|sp|Q8CNS0|DCUP_STAES RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 353
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 10 LRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 68
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T + + ++P D+
Sbjct: 69 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDV 128
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 129 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 182
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 183 TWFALMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 242
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 243 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSILL 300
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G +IFNLGHG+ P+V P+ + + + V +
Sbjct: 301 APWDVIESRLKDILNQGLNRGKYIFNLGHGVFPEVKPETLRKVTEFVHN 349
>gi|302525785|ref|ZP_07278127.1| uroporphyrinogen decarboxylase [Streptomyces sp. AA4]
gi|302434680|gb|EFL06496.1| uroporphyrinogen decarboxylase [Streptomyces sp. AA4]
Length = 357
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 181/327 (55%), Gaps = 13/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ LD C+ PE E+T+QP+RR DAAILFSDI+V
Sbjct: 38 PVWFMRQAGRSLPEYRALREGVP-MLDACFDPEMLAEITMQPVRRLGVDAAILFSDIVVP 96
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G ++ V GP + P+ + P ++ + + + +L ++L
Sbjct: 97 LKAAGVDIDIVPGTGPVVASPVRDADAVRALPKLEP--EQVGKVADGVRLLVERL-GETP 153
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY+I GG ++H + + ++ L L+D++A +L AQ+ AG
Sbjct: 154 LIGFAGAPFTLASYLIEGGPSRNHEHTKALMHSQPEVWHDLAARLADLAATFLRAQLEAG 213
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +Q+FD+ AG L E ++ + R++ AV +Y I F G G +L R
Sbjct: 214 VDAVQLFDSWAGALSERDYREFVLPHSSRVL-AVAGEY-GVPRIHFGVGTGELLGAMRE- 270
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV-LGSGPF 317
++ +G+DW +PL A++ L VQGNLDP L V+ V I++ +
Sbjct: 271 AGADVVGVDWRIPLDVAVQRLGGNVSVQGNLDPALLYASWPVLEAEVRRIVEEGRAARGH 330
Query: 318 IFNLGHGITPQVDP---KNVLDLVKTV 341
+FNLGHG+ P VDP K V+DLV ++
Sbjct: 331 VFNLGHGVLPGVDPEVLKRVVDLVHSL 357
>gi|237838243|ref|XP_002368419.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii ME49]
gi|211966083|gb|EEB01279.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii ME49]
Length = 665
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 48/364 (13%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAAILFSDILV 79
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA I+FSDILV
Sbjct: 288 PVWMMRQAGRYLPEFRNMRRQ-HGFLEVCRDPRLASELTLQPYRRFPQLDAVIIFSDILV 346
Query: 80 IADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
I +A+G + E GPR P Q++ P+I+ L Y +F ++ + ++L
Sbjct: 347 IPEAMGMKLSMEEGVGPRFAWRIESPADMQKLNF-KPDIEETLGY---VFDAVYVTSQQL 402
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D+ EYL+
Sbjct: 403 AGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITDICVEYLVG 462
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------- 247
Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 463 QVDAGAQVLQVFDTNASQFAAETYDEIGAPYMASIAERVKARRPHVTMIAFPKDRPSAGF 522
Query: 248 ----------GAGYMLKNYRR-------------------LTDSNAIGLDWSVPLSFALE 278
G+ +++ +R LT S+A + +
Sbjct: 523 ADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESDRDRKSDVR 582
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
++ +QGNLDP L + ++ G G I NLGHG+ P++ P++ +
Sbjct: 583 GDRKA-LQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMKPEHAKAFI 641
Query: 339 KTVR 342
V+
Sbjct: 642 DGVK 645
>gi|298493162|ref|YP_003723339.1| uroporphyrinogen decarboxylase ['Nostoc azollae' 0708]
gi|298235080|gb|ADI66216.1| uroporphyrinogen decarboxylase ['Nostoc azollae' 0708]
Length = 350
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 189/342 (55%), Gaps = 12/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP R +
Sbjct: 10 LLRAARGEVVDRPPVWMMRQAGRYMKVYRDLREKYPSFRDRSEIPEVAIEVSLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNP-NIDLFLNYLLPIF 124
D ILFSDI+ +G ++ E +GP + PI TQ +I L+P + + L ++ I
Sbjct: 70 PDGVILFSDIVTPLPGIGIDMDIAEGKGPIIYSPIRTQAQIEKLHPLDPEKALPFIKMIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+S LRK++ N T++GF GAPWT+A+Y + G K + + A+ + + LL L
Sbjct: 130 ES---LRKEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILHQLLTKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A+Y+ QI G V+Q+FD+ AG L +++ +A + V+ +P+ I
Sbjct: 187 ANSIADYVRYQIDCGAQVVQMFDSWAGQLSPQDYDTFALPYQKMVFEKVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
G+ +L+ R+ S A I +DW+V ++ A L K VQGNLDP L + +
Sbjct: 247 LVTGSAGLLE---RMPASGADIITVDWAVDMADARARLGKYVKVQGNLDPGVLFGSKEFI 303
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D V + G+ I NLGHG+ P+ +NV +T ++
Sbjct: 304 RDRVLDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKN 345
>gi|41408897|ref|NP_961733.1| uroporphyrinogen decarboxylase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|81700458|sp|Q73W61|DCUP_MYCPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|41397256|gb|AAS05116.1| HemE [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 357
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 181/334 (54%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+RR++ DAAILFSDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVRRHDVDAAILFSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+ T ++ + P L + PI ++ +L L +
Sbjct: 88 LLGAGIDLDIVAGVGPVIASPVRTAADVAAMKP---LERQRVQPIADAVRLLVSAL-VEV 143
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + + +++ L++ L+D++ +L Q+ A
Sbjct: 144 PLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEKLTDITVGFLRVQLDA 203
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKF-ISFAKGAGYMLKNY 256
GVD +Q+FD+ AG L + +Y R+ +A+ P F + A+ G M
Sbjct: 204 GVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADYGVPMTHFGVGTAELLGAMSAAL 263
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ + +G+DW L+ A G +QGNLDP+ L+ G V+ A++D
Sbjct: 264 KP-APATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWPVVETAARAVVDDGRRA 322
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 323 VDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|289435553|ref|YP_003465425.1| uroporphyrinogen decarboxylase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171797|emb|CBH28343.1| uroporphyrinogen decarboxylase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 350
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 186/343 (54%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L + +N P+W MRQAGR PEYR+++ K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRAARKESVNRIPVWYMRQAGRSQPEYRKLKAKYSLF-EITHQPELCAYVTKLPVDQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP + +PI T +++ + P I++ +
Sbjct: 69 DAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIKTYQDVEKLTVFKPEIEVPY-----V 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++
Sbjct: 124 LDTIKLLTDDM-LEVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPDVWAMLMEK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A+YLIAQI+AG +Q+FD+ G L ++ Y + +II ++ +P I
Sbjct: 183 LGRMTADYLIAQINAGASAVQLFDSWVGALSRPDYATYIRPVIEKIILEIKAVHPTTPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
A GAG++L + + + +G+DW L+ A + +QGNLDP L+ + + +
Sbjct: 243 MQAVGAGHLLAEWETMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPEKCLEE 301
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+ + + +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 302 TERILQEGILKPGYIFNLGHGVFPEVSPEMLKKLTAYIHDRSE 344
>gi|32475041|ref|NP_868035.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
gi|32445581|emb|CAD75582.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
Length = 673
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 180/332 (54%), Gaps = 23/332 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRY+ EYR++R + ++FL++C P+ E+ + + N DAAI+FSD+L I
Sbjct: 338 PVWMMRQAGRYMQEYREVRSQ-QSFLELCANPKLCSEVMCTAVEKLNVDAAIIFSDLLPI 396
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G ++ FV+ +GP + +P+ + + L+ DL +++++ R LP
Sbjct: 397 LVPMGFDLEFVKGDGPVIHNPVRSAADVDRVKGLDNPQDLGF-----VYETVKQTRADLP 451
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
I LIGF GAP+T+ASY I GG + + + + L+D L+D YL Q
Sbjct: 452 EGIPLIGFAGAPFTLASYAIEGGGSRQYSSTKALMRAGDGGWAALMDRLTDAIIVYLNEQ 511
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY---M 252
I AG +Q+FD+ AGCL ++ + + RI+ V P I+FA G +
Sbjct: 512 ISAGAQCVQLFDSWAGCLSPGDYREFVLPWMKRILEGV---TPGVPLINFATGNPELLPL 568
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L+ RR +G+DW + L A + + + VQGNLDP L+ + + V +L+
Sbjct: 569 LRGDRR----TVVGVDWRIELDVAWKRVGHDISVQGNLDPSVLLTDAKTIRAAVQDVLNK 624
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G P IFNLGHG+ Q +N ++LVK V+
Sbjct: 625 AGGRPGHIFNLGHGVLQQTPVENAIELVKAVK 656
>gi|305679973|ref|ZP_07402783.1| uroporphyrinogen decarboxylase [Corynebacterium matruchotii ATCC
14266]
gi|305660593|gb|EFM50090.1| uroporphyrinogen decarboxylase [Corynebacterium matruchotii ATCC
14266]
Length = 380
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 174/336 (51%), Gaps = 27/336 (8%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W MRQAGR LPEYRQ+R + LD C+ PE E+TLQP+RR++ DAAILFSDI+V
Sbjct: 48 VWFMRQAGRSLPEYRQVRAGI-DMLDSCFMPELLAEITLQPVRRHDVDAAILFSDIVVPL 106
Query: 82 DALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN 136
A G +V V GP + PI + ++ +L+ +ID + + I+ L +
Sbjct: 107 KAAGVDVEIVSGRGPVVAQPILSMSDVDKLPVLDSDID-------GVMAGVGIIIDNLTS 159
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
LIGF GAP+T+ASY++ GG ++H + + + ++ L+ L+ +L QI
Sbjct: 160 SQALIGFAGAPFTLASYLVEGGPSRNHEKTKAMMHAQPETWHALMRKLTPTITHFLSMQI 219
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AG+D +Q+FD+ AG L E ++ Y I +A+ I F G G +L
Sbjct: 220 SAGIDAMQLFDSWAGFLTERDYREYVLPYSMEIFAAI--AGAGIPRIHFGVGTGELLGAM 277
Query: 257 RRLTDSNAIGLDWSVPLSFALEL--QKEGP--VQGNLDPMRLVVGNQVMIDGVNAILD-- 310
+ ++ G+DW VPL A GP VQGNLDP L G +V+ I
Sbjct: 278 SQ-AGADVTGVDWRVPLDVAARRIHHAVGPKSVQGNLDPALLCAGEEVVRAEAARICAEA 336
Query: 311 --VLGSG---PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ +G IFNLGHG+ P DP+ + V V
Sbjct: 337 DRAISAGHAIGHIFNLGHGVLPTTDPEMITRAVSLV 372
>gi|242802986|ref|XP_002484083.1| uroporphyrinogen decarboxylase [Talaromyces stipitatus ATCC 10500]
gi|218717428|gb|EED16849.1| uroporphyrinogen decarboxylase [Talaromyces stipitatus ATCC 10500]
Length = 363
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 186/346 (53%), Gaps = 26/346 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+W+MRQAGRYLPEY + + ++F + C +PE LTLQP+ RY
Sbjct: 13 LLRAARGETVERPPVWVMRQAGRYLPEYHEAKGN-RDFFECCRSPEIASTLTLQPVERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR-----MDPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP + P Q +L ++D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMIVEMIDKKGPSFPEPLISPDDGQYEKILKKDVDVKKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 132 Y---VYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFIQSKKWIYKYPNESK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L ++++ EYL Q+ AG ++Q+FD+ AG L F+ +A + I + ++
Sbjct: 189 AMLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPATFKEFALPYLRHISQHLPKRLQ 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L + L +S N +GLDW + A + + +QGN D
Sbjct: 249 ELGLERVPMTVFAKGAWYALDD---LCESGYNVVGLDWLHDPAEAYSVARGRVALQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNV 334
P L + V ++ G +I NLGHGITP V+P ++
Sbjct: 306 PGILYGDRNAITKTVENMVKGFGGGKKGWIANLGHGITPFVNPDDL 351
>gi|290766188|gb|ADD60150.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 342
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 183/340 (53%), Gaps = 9/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP RRY
Sbjct: 5 LLRAARGEAVERIPVWMMRQAGRHMQEYRDLIKKYPTFRERSEIHEVSTEISLQPYRRYG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP-IFQS 126
D ILFSDIL +G + + E GP++ P+ T E ID P + Q+
Sbjct: 65 TDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTID--SEKACPFVGQT 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L ++D
Sbjct: 123 LRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAKIAD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I +
Sbjct: 183 SIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDIFAAPYQKKVIQKIKSSHPEVPIIIYI 242
Query: 247 KGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+G +L+ R++ S A I LDW+V + A + + + +QGNLDP L N+V+ +
Sbjct: 243 NKSGALLE---RMSQSGADIISLDWTVMIEEARKRIGNDIGIQGNLDPAALFAPNEVIKE 299
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL G + NLGHGI + + TV++
Sbjct: 300 RTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKN 339
>gi|68536152|ref|YP_250857.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium K411]
gi|68263751|emb|CAI37239.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium K411]
Length = 385
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 179/350 (51%), Gaps = 31/350 (8%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W+MRQAGR LPEYR+IRK + L+ C+ PE E+TLQP+RR++
Sbjct: 33 LAAARGETPSRRPVWMMRQAGRSLPEYREIRKDY-GMLESCFNPELLAEITLQPVRRHDA 91
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDI+V A G ++ V GP ++ P+ T E P ++ + L I + I
Sbjct: 92 DAAILFSDIVVPLKAAGVDLDIVAGRGPVVEHPVRTAEEVTALPIVES--SQLDSIVEGI 149
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ + L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+ L+
Sbjct: 150 GGVLQGLRDDQVLIGFAGAPFTLASYLVEGGPSKNHEVTKALMYSQPDVWHALMRRLTPT 209
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+L Q AGVD +Q+FD+ AG L ++ + +I A+R I F
Sbjct: 210 IIRFLQVQAEAGVDALQLFDSWAGYLTARDYREFVRPYSTQIFDAMRAY--GIPMIHFGV 267
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFA-----LELQKEGP----------VQGNLDPM 292
G G +L + L + +G+DW VPL A LQ+ P +QGNLDP
Sbjct: 268 GTGELLGDM-ALAGPDVVGVDWRVPLDSAATRVSAALQEADPTAEPTARAKALQGNLDPA 326
Query: 293 RLVVGNQVM--------IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L G +V+ + AI G IFNLGHG+ P DP +
Sbjct: 327 VLFAGPEVVETQIARICAEADRAIERGQARG-HIFNLGHGVLPNTDPDAI 375
>gi|227549761|ref|ZP_03979810.1| uroporphyrinogen decarboxylase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078147|gb|EEI16110.1| uroporphyrinogen decarboxylase [Corynebacterium lipophiloflavum DSM
44291]
Length = 349
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 174/351 (49%), Gaps = 25/351 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I++ G P+W MRQAGR LPEYRQ+R LD C+ PE E+TLQP+RR++
Sbjct: 11 IIDAAYGRTPTRTPVWFMRQAGRSLPEYRQVRDGI-GMLDACFMPELLAEITLQPVRRHD 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPIT-----TQEIYLLNPNIDLFLNYLLP 122
DAAILFSDI+V A G NV V GP M ++ +L +++
Sbjct: 70 VDAAILFSDIVVPLKAAGVNVEIVPGRGPVMAQAVRSRGDVDKLPMLEGDVE-------E 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + ++ L++
Sbjct: 123 VARGIRIILDELTDAQALIGFVGAPFTLASYLVEGGPSKNHEKTKAMMHGEPETWHALME 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L +L Q+ AG+D +Q+FD+ AG L E ++ + I+ +V + P
Sbjct: 183 KLVPTIVAFLRTQVTAGIDAMQLFDSWAGFLTERDYREHVLPYSVEILRSVEGEIPR--- 239
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F G +L S +G+DW VPL A +QGNLDP L G V+
Sbjct: 240 IHFGVATGELLGAMSE-AGSEVMGVDWRVPLDVAARRFATPRVLQGNLDPAILFAGPGVV 298
Query: 302 IDGVNAILD-------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V I + + IFNLGHG+ P D V + V + E+
Sbjct: 299 RGEVRRIKEEAARAIAAGDATGHIFNLGHGVLPTTDADAVTEAVAMIHEER 349
>gi|221484311|gb|EEE22607.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii GT1]
Length = 665
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 48/364 (13%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAAILFSDILV 79
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA I+FSDILV
Sbjct: 288 PVWMMRQAGRYLPEFRNMRRQH-GFLEVCRDPRLASELTLQPYRRFPQLDAVIIFSDILV 346
Query: 80 IADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
I +A+G + E GPR P Q++ P+I+ L Y +F ++ + ++L
Sbjct: 347 IPEAMGMKLSMEEGVGPRFAWRIESPADMQKLNF-KPDIEGTLGY---VFDAVYVTSQQL 402
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D+ EYL+
Sbjct: 403 AGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITDICVEYLVG 462
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------- 247
Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 463 QVDAGAQVLQVFDTNASQFAAEAYDEIGAPYMASIAKRVKARRPHVTMIAFPKDRPSAGF 522
Query: 248 ----------GAGYMLKNYRR-------------------LTDSNAIGLDWSVPLSFALE 278
G+ +++ +R LT S+A + +
Sbjct: 523 ADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESDRDRKSDVR 582
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
++ +QGNLDP L + ++ G G I NLGHG+ P++ P++ +
Sbjct: 583 GDRKA-LQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMKPEHAKAFI 641
Query: 339 KTVR 342
V+
Sbjct: 642 DGVK 645
>gi|299139339|ref|ZP_07032514.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX8]
gi|298598608|gb|EFI54771.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX8]
Length = 375
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 175/334 (52%), Gaps = 11/334 (3%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
++ P+W +RQAGRY+PEY +RK + LD+C TPE E+T+ R DAAI+F+D
Sbjct: 36 VDRTPVWFLRQAGRYMPEYMAVRKH-HSLLDICRTPEIASEVTITAAERLGVDAAIIFAD 94
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQSISI-LRKK 133
+L+ +G + FV EGP ++ P+ + E + L + L Y+ + ++
Sbjct: 95 LLLPFTPMGLDFEFVNGEGPVVNTPVRSLEHVQALRTDRTDDLRYVASAIEKVAKHFNAP 154
Query: 134 LPNHITL--IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
P+ TL IGFCGAP+T+ASYMI GG +++ + + Y + + L++ L V Y
Sbjct: 155 RPDGDTLGIIGFCGAPFTLASYMIEGGSSRNYVETKKIMYSHDATWALLMEKLVTVLVAY 214
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
Q+ AG DVIQIFD+ AG L ++ Y ++ R K I F
Sbjct: 215 AEQQVEAGADVIQIFDSWAGALSVSDYRQYCLAPTTELVR--RVKALGVPVIYFGVDTAS 272
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD 310
+L R T ++ +GLDW +PL G VQGNLDP+ L V+ D V +L+
Sbjct: 273 LLPTMRETT-ADVLGLDWRIPLDEGWRAAGAGCAVQGNLDPITLFAPEDVLRDRVQEVLN 331
Query: 311 VLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ P IFNLGHGI P NV+ +V+ V+
Sbjct: 332 LANGRPGHIFNLGHGIVPGTPVDNVIRVVEWVKE 365
>gi|288917123|ref|ZP_06411493.1| uroporphyrinogen decarboxylase [Frankia sp. EUN1f]
gi|288351492|gb|EFC85699.1| uroporphyrinogen decarboxylase [Frankia sp. EUN1f]
Length = 360
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 180/327 (55%), Gaps = 19/327 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R LD C P+ E+TLQPIRR+ DAAI FSDI++
Sbjct: 41 PVWFMRQAGRVLPEYRALRAN-TAMLDSCRNPDLVTEITLQPIRRFRPDAAIFFSDIVLP 99
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +V V GP + PI + ++ +L P + Y + ++ L ++L
Sbjct: 100 LAAVGVDVDIVAGVGPVVAHPIRARADLDILRPLEPDDVPY---VQTAVGSLIREL-GTT 155
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + Y ++ LL L+D++A +L Q+ A
Sbjct: 156 PLIGFAGAPFTLASYLIEGGPSRSHIKTKALMYSEPELWHDLLGRLADITAAFLRVQVDA 215
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D +Q+FD+ AG L E ++ Y A R+++A I F G +L
Sbjct: 216 GADAVQLFDSWAGALSEDDYRRYVAPHSSRVLAAFADD--GIPRIHFGVNTGQLLGAMGE 273
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ ++ +G+DW VPL A+ ++ GP VQGNLDP + ++ + V + +
Sbjct: 274 VG-ADVVGVDWRVPLDEAV--KRIGPGRSVQGNLDPAAVFAPGDLLAEKVRDVCHRGAAA 330
Query: 316 P-FIFNLGHGITPQVDP---KNVLDLV 338
P IFNLGHG+ P+ DP +++DLV
Sbjct: 331 PGHIFNLGHGVLPESDPGVLAHIVDLV 357
>gi|313632257|gb|EFR99316.1| uroporphyrinogen decarboxylase [Listeria seeligeri FSL N1-067]
gi|313636761|gb|EFS02413.1| uroporphyrinogen decarboxylase [Listeria seeligeri FSL S4-171]
Length = 350
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 186/343 (54%), Gaps = 15/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L + +N P+W MRQAGR PEYR+++ K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRAARKESVNRIPVWYMRQAGRSQPEYRKLKAKYSLF-EITHQPELCAYVTKLPVDQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP + +PI T +++ + P I++ +
Sbjct: 69 DAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIKTYQDVEKLTIFKPEIEVPY-----V 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++
Sbjct: 124 LDTIKLLTDDM-LEVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPDVWAMLMEK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A+YLIAQI+AG +Q+FD+ G L ++ Y + +I+ ++ +P I
Sbjct: 183 LGRMTADYLIAQINAGASAVQLFDSWVGALSRPDYATYIRPVIEKIVLEIKAVHPTTPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
A GAG++L + + + +G+DW L+ A + +QGNLDP L+ + + +
Sbjct: 243 MQAVGAGHLLAEWETMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPEKCLEE 301
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+ + + +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 302 TERILQEGILKPGYIFNLGHGVFPEVSPEMLKKLTAYIHDRSE 344
>gi|163782864|ref|ZP_02177860.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881985|gb|EDP75493.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 338
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 186/341 (54%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL ++ I P+WLMRQAGRY+ EYR++R + +NFL C + V+++L P+
Sbjct: 7 ILRAVRQEPIERFPVWLMRQAGRYMKEYRELRAREENFLSFCKNVDLAVKVSLLPLELLG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DA I+FSDILV +ALG V F+E EGPR++ ++ +P + F +++
Sbjct: 67 VDAVIIFSDILVPLEALGVKVEFLEGEGPRLEWSGAVSDLKRYDPEENAF------VYEI 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I + KK + + +IGF GAP+T+ASYMI G +D ++F + F L++ L D
Sbjct: 121 IRRV-KKAQDEVPVIGFAGAPFTLASYMIEGRSSRDFRNTKLFMWDREYEFKRLMEVLVD 179
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL+ Q AG +++Q+FD+ L ++E + V +I ++ + I F
Sbjct: 180 TLHAYLVRQAEAGANLLQLFDSWTNYLSRSDYEEFVFPYVEELIERLKDS-TDVPLIYFF 238
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM-IDGV 305
KG+ L + T ++A+ +DWSV LS +++ +QGNL+P L ++ + +
Sbjct: 239 KGSSSFL-DLAEQTKADALSVDWSVDLSLE-AVRRRKVLQGNLEPSVLYASDETIRFKAL 296
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + +IFNLGHG+ P ++ + V LV TV+ +I
Sbjct: 297 ELLRGMPRKTGYIFNLGHGLAPDMEFEKVKLLVDTVKDYRI 337
>gi|70780276|gb|AAZ08389.1| uroporphyrinogen III decarboxylase [Toxoplasma gondii]
Length = 665
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 181/364 (49%), Gaps = 48/364 (13%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAAILFSDILV 79
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DAAI+FSDILV
Sbjct: 288 PVWMMRQAGRYLPEFRNMRRQH-GFLEVCRDPRLASELTLQPYRRFPQLDAAIIFSDILV 346
Query: 80 IADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
I +A+G + E GPR P +++ P+I+ L Y +F ++ + ++L
Sbjct: 347 IPEAMGMKLSMEEGVGPRFAWRIESPADMRKLNF-KPDIEGTLGY---VFDAVYVTSQQL 402
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D+ EYL+
Sbjct: 403 AGAIPLIGFCGGPLTLLTYMVEGGGGKTWRQAKKFVYEHPEATHTLLQVITDICVEYLVG 462
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------- 247
Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 463 QVDAGAQVLQVFDTNASQFAAEAYDEIGAPYMASIAKRVKARRPHVTMIAFPKDRPSAGF 522
Query: 248 ----------GAGYMLKNYRR-------------------LTDSNAIGLDWSVPLSFALE 278
G+ +++ +R LT S+A + +
Sbjct: 523 ADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESDRDRKSDVR 582
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
++ +QGNLDP L + ++ G G I NLGHG+ P++ P++ +
Sbjct: 583 GDRKA-LQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMKPEHAKAFI 641
Query: 339 KTVR 342
V+
Sbjct: 642 DGVK 645
>gi|108760710|ref|YP_633523.1| uroporphyrinogen decarboxylase [Myxococcus xanthus DK 1622]
gi|123074099|sp|Q1D1F0|DCUP_MYXXD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|108464590|gb|ABF89775.1| uroporphyrinogen decarboxylase [Myxococcus xanthus DK 1622]
Length = 348
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 186/350 (53%), Gaps = 15/350 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN+R +L + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+
Sbjct: 1 MNDR---LLRAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTV 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ R DAAI+FSDIL+ +A+G + ++GP DP+ + +I L P+
Sbjct: 57 QPVTRLGVDAAIIFSDILIPVEAMGITLEL-GDKGPHFPDPVRSAADIDKLGVPDPVEGT 115
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + ++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++
Sbjct: 116 GF---VAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQPELA 172
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L L+D YL Q+ AG ++QIFD+ G L ++E + + R++S + K
Sbjct: 173 HRLFGKLTDTLIPYLKMQVEAGASIVQIFDSWGGALSPWDYERFCIPYLKRMVSEL--KA 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F G L + + T ++ +GLDW++P+ + L + VQGNLDP+ L +
Sbjct: 231 TGVPVIVFGVGMSSHL-SLLKSTGADVVGLDWTLPMDEGRKVLGPDVAVQGNLDPLHLFL 289
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V IL G IFNLGHGI P DP LV+ V +
Sbjct: 290 PREELDGRVKDILRRAGPEGHIFNLGHGILPPTDPDAAKFLVEAVHRHGV 339
>gi|327540526|gb|EGF27106.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica WH47]
Length = 673
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 179/332 (53%), Gaps = 23/332 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRY+ EYR++R + + FL++C P+ E+ + + N DAAI+FSD+L I
Sbjct: 338 PVWMMRQAGRYMQEYREVRSQ-QTFLELCANPKLCSEVMCTAVEKLNVDAAIIFSDLLPI 396
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G ++ FV+ +GP + +P+ + + L+ DL +++++ R LP
Sbjct: 397 LVPMGFDLEFVKGDGPVIHNPVRSAADVDRVKGLDNPQDLGF-----VYETVKQTRADLP 451
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
I LIGF GAP+T+ASY I GG + + + + L+D L+D YL Q
Sbjct: 452 EGIPLIGFAGAPFTLASYAIEGGGSRQYSSTKALMRAGDGGWAALMDRLTDAIIVYLNEQ 511
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY---M 252
I AG +Q+FD+ AGCL ++ + + RI+ V P I+FA G +
Sbjct: 512 ISAGAQCVQLFDSWAGCLSPGDYREFVLPWMKRILEGV---TPGVPLINFATGNPELLPL 568
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L+ RR +G+DW + L A + + + VQGNLDP L+ + + V +L+
Sbjct: 569 LRGDRR----TVVGVDWRIELDVAWKRVGHDISVQGNLDPSVLLTDAKTIRAAVQDVLNK 624
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
G P IFNLGHG+ Q +N ++LVK V+
Sbjct: 625 AGGRPGHIFNLGHGVLQQTPVENAIELVKAVK 656
>gi|54025708|ref|YP_119950.1| uroporphyrinogen decarboxylase [Nocardia farcinica IFM 10152]
gi|81679905|sp|Q5YTA5|DCUP_NOCFA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54017216|dbj|BAD58586.1| putative uroporphyrinogen decarboxylase [Nocardia farcinica IFM
10152]
Length = 354
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 175/331 (52%), Gaps = 19/331 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R L+ C+ PE E+T+QPIRR+ DAAILFSDI+V
Sbjct: 30 PVWFMRQAGRSLPEYRELRAGI-GMLESCFDPELVCEITMQPIRRHGVDAAILFSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A G ++ V GP + P+ + P L + + + + +L L
Sbjct: 89 LKAAGIDLDIVAGVGPVVAAPVRSVADVRALPR--LRPEEVGAVVEGVRLLVDAL-GQTP 145
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG K H + + Y + + ++ LL L+D++ +L AQ+ AG
Sbjct: 146 LIGFAGAPFTLASYLVEGGPSKHHERTKAMMYADPKTWHELLGVLTDITIAFLRAQLDAG 205
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +Q+FD+ AG L ++ + R+ + + I F G G +L
Sbjct: 206 VDAVQLFDSWAGALSPADYRAFVLPHSERVFTEIADA--GVPRIHFGVGTGELLGAMGE- 262
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD------ 310
++ +G+DW V L+ A ++ GP +QGNLDP L G + + I +
Sbjct: 263 AGADVVGVDWRVSLTEA--ARRVGPGKALQGNLDPAVLFAGPRAVEAHARRIAEEADRAL 320
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
LG+ IFNLGHG+ P DP + LV+ V
Sbjct: 321 ALGAAGHIFNLGHGVLPDTDPGVLTALVELV 351
>gi|108799179|ref|YP_639376.1| uroporphyrinogen decarboxylase [Mycobacterium sp. MCS]
gi|108769598|gb|ABG08320.1| uroporphyrinogen decarboxylase [Mycobacterium sp. MCS]
Length = 372
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 186/360 (51%), Gaps = 24/360 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L +G P+W MRQAGR LPEYR +R + + C+ +
Sbjct: 19 MNTRRELPDSPYLAAARGRKPARVPVWFMRQAGRSLPEYRALRAR-NTMMQACFDADLIT 77
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNID 114
E+TLQP+RR+ DAAILFSDI+V A G + V + GP +D P+ T ++ + P
Sbjct: 78 EITLQPVRRHGVDAAILFSDIVVPLRASGIALDIVPDVGPVIDHPVRTAADVAAIRP--- 134
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + P+ Q++ +L L + LIGF GAP+T+ASY++ GG K H +
Sbjct: 135 LERQTVEPVEQAVRMLTAAL-GDVPLIGFAGAPFTLASYLVEGGPSKHHEHTKAMMLGAP 193
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
++ L+ L+DV+ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 194 DTWHALMSALTDVTIAFLQAQVDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFQALA 253
Query: 235 -RKYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
P F + A+ G M + +G+DW L+ A +++ +QGNLDP
Sbjct: 254 PAGVPMTHFGVGTAELLGAMSEAIATSGAPGVVGVDWRTSLTDAAGRVERGSALQGNLDP 313
Query: 292 MRLVVG--------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G V+ DG A+ G+ +FNLGHG+ P DP+ V V+ V S
Sbjct: 314 VVLLAGWPVVERAVRAVVEDGRRAV--DAGAAGHVFNLGHGVLPATDPEIVTATVELVHS 371
>gi|119868294|ref|YP_938246.1| uroporphyrinogen decarboxylase [Mycobacterium sp. KMS]
gi|126434787|ref|YP_001070478.1| uroporphyrinogen decarboxylase [Mycobacterium sp. JLS]
gi|166234257|sp|A3PYL0|DCUP_MYCSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234258|sp|A1UF48|DCUP_MYCSK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119694383|gb|ABL91456.1| uroporphyrinogen decarboxylase [Mycobacterium sp. KMS]
gi|126234587|gb|ABN97987.1| uroporphyrinogen decarboxylase [Mycobacterium sp. JLS]
Length = 354
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 186/360 (51%), Gaps = 24/360 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L +G P+W MRQAGR LPEYR +R + + C+ +
Sbjct: 1 MNTRRELPDSPYLAAARGRKPARVPVWFMRQAGRSLPEYRALRAR-NTMMQACFDADLIT 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNID 114
E+TLQP+RR+ DAAILFSDI+V A G + V + GP +D P+ T ++ + P
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLRASGIALDIVPDVGPVIDHPVRTAADVAAIRP--- 116
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + P+ Q++ +L L + LIGF GAP+T+ASY++ GG K H +
Sbjct: 117 LERQTVEPVEQAVRMLTAAL-GDVPLIGFAGAPFTLASYLVEGGPSKHHEHTKAMMLGAP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
++ L+ L+DV+ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 176 DTWHALMSALTDVTIAFLQAQVDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFQALA 235
Query: 235 -RKYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
P F + A+ G M + +G+DW L+ A +++ +QGNLDP
Sbjct: 236 PAGVPMTHFGVGTAELLGAMSEAIATSGAPGVVGVDWRTSLTDAAGRVERGSALQGNLDP 295
Query: 292 MRLVVG--------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G V+ DG A+ G+ +FNLGHG+ P DP+ V V+ V S
Sbjct: 296 VVLLAGWPVVERAVRAVVEDGRRAV--DAGAAGHVFNLGHGVLPATDPEIVTATVELVHS 353
>gi|118467722|ref|YP_887111.1| uroporphyrinogen decarboxylase [Mycobacterium smegmatis str. MC2
155]
gi|166234256|sp|A0QW23|DCUP_MYCS2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118169009|gb|ABK69905.1| uroporphyrinogen decarboxylase [Mycobacterium smegmatis str. MC2
155]
Length = 353
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 184/358 (51%), Gaps = 21/358 (5%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W MRQAGR LPEYR++R + + L C+ E
Sbjct: 1 MNTRRELPESPYLAAASGRSPHRVPVWFMRQAGRSLPEYRELRAQHR-MLQACFDAELVC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QP+RR+ DAAILFSDI+V A G + V + GP +D PI T P ++
Sbjct: 60 EITMQPVRRHKVDAAILFSDIVVPLKAAGIGLDIVPDVGPVIDNPIRTLGDVQAMPALES 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ +++ +L +L + LIGF GAP+T+ASY++ GG + H + + S
Sbjct: 120 --PQVAPVAEAVRLLTAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHERTKAMMLGESS 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+D++ +L AQ+ AGVD +Q+FD+ AG L ++ Y R+ + +
Sbjct: 177 TWHALMTALTDLTIAFLQAQVDAGVDALQVFDSWAGTLSLTDYREYVLPHSSRVFATMAA 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNA---IGLDWSVPLS-FALELQKEGPVQGNLDP 291
F G +L A +G+DW L+ A + +QGNLDP
Sbjct: 237 A--GVPMTHFGVGTAELLGAMSEALAPGAARVVGVDWRTSLADAAARVLPGAALQGNLDP 294
Query: 292 MRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G V+ V +++ G+ IFNLGHG+ P DP + D V+ V S
Sbjct: 295 VVLLAGWPVVEKAVRRVVEDGRAAVAAGAAGHIFNLGHGVLPATDPGIITDAVELVHS 352
>gi|221505711|gb|EEE31356.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii VEG]
Length = 665
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 180/364 (49%), Gaps = 48/364 (13%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAAILFSDILV 79
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA I+FSDILV
Sbjct: 288 PVWMMRQAGRYLPEFRNMRRQ-HGFLEVCRDPRLASELTLQPYRRFPQLDAVIIFSDILV 346
Query: 80 IADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
I +A+G + E GPR P Q++ P+++ L Y +F ++ + ++L
Sbjct: 347 IPEAMGMKLSMEEGVGPRFAWRIESPADMQKLNF-KPDVEGTLGY---VFDAVYVTSQQL 402
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D+ EYL+
Sbjct: 403 AGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITDICVEYLVG 462
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------- 247
Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 463 QVDAGAQVLQVFDTNASQFAAETYDEIGAPYMASIAKRVKARRPHVTMIAFPKDRPSAGF 522
Query: 248 ----------GAGYMLKNYRR-------------------LTDSNAIGLDWSVPLSFALE 278
G+ +++ +R LT S+A + +
Sbjct: 523 ADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESDRDRKSDVR 582
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
++ +QGNLDP L + ++ G G I NLGHG+ P++ P++ +
Sbjct: 583 GDRKA-LQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMKPEHAKAFI 641
Query: 339 KTVR 342
V+
Sbjct: 642 DGVK 645
>gi|320103648|ref|YP_004179239.1| uroporphyrinogen decarboxylase [Isosphaera pallida ATCC 43644]
gi|319750930|gb|ADV62690.1| uroporphyrinogen decarboxylase [Isosphaera pallida ATCC 43644]
Length = 360
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 177/326 (54%), Gaps = 13/326 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIWLMRQAGRY+PEYR +R K FL++C PE ++T++ DAAILF+DIL+I
Sbjct: 37 PIWLMRQAGRYMPEYRAVRNKV-GFLELCKRPELACQVTVEAAEILGVDAAILFADILLI 95
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNID-LFLNYLLPIFQSISILRKKLPNH 137
+ LG ++ F + EGP + +PI E + + P D L+Y + +++ ++R LP
Sbjct: 96 LEPLGFDLEFAKGEGPVIHNPIRCPEDLQRVRPLSDHQPLDY---VTKAVKLIRDTLPPR 152
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GAP+T+A Y I GG ++ + F + A+ LLD L+D +A YL AQ+
Sbjct: 153 LPLIGFAGAPFTLACYAIEGGGSRNFETAKSFMRTHPEAWRTLLDRLADATAIYLNAQVA 212
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG D +Q+FD+ G L ++ ++ R+ +++ P F + ML ++
Sbjct: 213 AGADALQLFDSWVGSLSPSDYVESVQPAMRRLFASLDATVPRIHFGTDTA----MLLTHQ 268
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
R IGLD VPL + E L + VQGNLDP L + + IL G P
Sbjct: 269 RDAGGEVIGLDHRVPLDWGWERLGDQVAVQGNLDPTCLFAPIPEIRRQADRILAEAGGRP 328
Query: 317 -FIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHGI P +V LV V
Sbjct: 329 GHIFNLGHGILPGTPVDHVKALVDYV 354
>gi|33861140|ref|NP_892701.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|45476858|sp|Q7V2A0|DCUP_PROMP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33639872|emb|CAE19042.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 346
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 182/340 (53%), Gaps = 12/340 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI----TTQEIYLLNPNIDL 115
QP + D ILFSDIL +G N +E++GP + DPI +++ L PN L
Sbjct: 61 QPFLAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNIRQVEKLKELIPNESL 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 SF-----VGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPD 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+
Sbjct: 176 LLHKLLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKE 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
++P+ I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L
Sbjct: 236 EFPDTPIILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPTGIGIQGNVDPGIL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + ++ + + +I NLGHGI P +N
Sbjct: 295 FGNKDSIKERIDNTFNKVKERKYILNLGHGILPGTPEENA 334
>gi|255324257|ref|ZP_05365379.1| uroporphyrinogen decarboxylase [Corynebacterium tuberculostearicum
SK141]
gi|255298773|gb|EET78068.1| uroporphyrinogen decarboxylase [Corynebacterium tuberculostearicum
SK141]
Length = 344
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 180/352 (51%), Gaps = 26/352 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +++ G + PP+W MRQAGR LPEYR R+ + LD C+ PE E+TLQP+R
Sbjct: 6 RAPLIDAALGRTPSRPPVWFMRQAGRSLPEYRAAREGI-SMLDSCFMPELLAEITLQPVR 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP- 122
R++ DAAILFSDI+V A G V V GP M+ + ++E P L +P
Sbjct: 65 RHDVDAAILFSDIVVPLKAAGVKVDIVPGRGPVMEQAVRSREDVGKLP----LLEADVPE 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I+ + +L LIGF GAP+T+ASY+I GG K+H + + + + ++ L+
Sbjct: 121 VTEGIARILAELTETQALIGFVGAPFTLASYLIEGGPSKNHQRTKALMHADPETWHMLMR 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L +L Q+ AG+D +Q+FD+ AG L E ++ + I+++V K P
Sbjct: 181 RLVPTITRFLQVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSREILASV--KIPR--- 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F G G +L S +G+D+ VP+ A E +QGNLDP L G+ +
Sbjct: 236 IHFGVGTGELLPAMSE-AGSEVMGVDYRVPMDAAAERVSARVLQGNLDPAMLFAGDDAVR 294
Query: 303 DGVNAIL----------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I D+ G I+NLGHG+ P D + + V + E
Sbjct: 295 QAVRTIRGEVDRARERGDIDG---HIWNLGHGVLPTTDAEAITRAVSIIHEE 343
>gi|113475390|ref|YP_721451.1| uroporphyrinogen decarboxylase [Trichodesmium erythraeum IMS101]
gi|123352425|sp|Q114U6|DCUP_TRIEI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110166438|gb|ABG50978.1| uroporphyrinogen decarboxylase [Trichodesmium erythraeum IMS101]
Length = 354
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 185/340 (54%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F + + VE++LQP +
Sbjct: 10 LLRATRGELLDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSENTDIAVEISLQPFHAFK 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D ILFSDIL A+G + +E++GP +DP T +I L+P + L ++ I
Sbjct: 70 PDGVILFSDILTPLPAIGIDFDIIESKGPIIDPPIRTEAQIDKLHPIEPEESLPFIREIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+ LR+++ N ++GF GAPWT+A+Y I G KD+ + A+ + L L
Sbjct: 130 QT---LRREVKNEAAVLGFIGAPWTLAAYAIEGKSCKDYTNIKKMAFCQPEMLHKFLGKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A Y QI++G VIQ+FD+ AG L ++E +A ++ V++ +PN FI
Sbjct: 187 AEAIAVYARYQINSGAQVIQMFDSWAGQLSPQDYETFALPYQKLVVQEVKKTHPNTPFIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + T + + +DWSV ++ A + L VQGN+DP L + +
Sbjct: 247 YINGSAGLLERMPQ-TGVDIVSVDWSVDIAEARQRLGNNICVQGNIDPGVLFGSQEFIKS 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + G+ I NLGHG+ + +NV KT +
Sbjct: 306 RILETIRKAGNRGHILNLGHGVLKETPEENVEFFFKTAKE 345
>gi|217963626|ref|YP_002349304.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HCC23]
gi|254767697|sp|B8DF98|DCUP_LISMH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|217332896|gb|ACK38690.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HCC23]
gi|307571798|emb|CAR84977.1| uroporphyrinogen decarboxylase [Listeria monocytogenes L99]
Length = 350
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 184/331 (55%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+S V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSEVKAAHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW ++ A E +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETITSAREKVPTKAIQGNLDPSTLLAPAKCLEEAERILQEGVLEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|118579058|ref|YP_900308.1| uroporphyrinogen decarboxylase [Pelobacter propionicus DSM 2379]
gi|171704463|sp|A1ALN0|DCUP_PELPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118501768|gb|ABK98250.1| uroporphyrinogen decarboxylase [Pelobacter propionicus DSM 2379]
Length = 340
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 180/338 (53%), Gaps = 8/338 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L+ G ++ P+WLMRQAGRYLPEY +R + FL++C TPE +++LQP+
Sbjct: 4 RFLDACWGKPVDRVPVWLMRQAGRYLPEYMAVRSRC-TFLELCKTPELAAQVSLQPVDIL 62
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL + +G + FV GP + + I + L +F
Sbjct: 63 GVDAAILFSDILTPVEPMGMKLDFVP--GPVFEKPVRCMADVERLRIPRMEDDLPFVFDI 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I ILR++L + + LIGF GAP+T+A YM+ G KD Q + Y + L++ ++
Sbjct: 121 IRILRRELADRVPLIGFGGAPFTLACYMVEGKGSKDFVQIKRMMYSAPDVYAALMEKITT 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S EYL AQI AG IQIFDT G L ++ + R+I+ + R I F
Sbjct: 181 MSMEYLNAQIAAGAQAIQIFDTWGGILSPSDYRTHVLPHTTRLINGLNRL--TTPVIHFV 238
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KGAG ML+ R + IGLDW V L+ A G VQGNLDP L V+ V
Sbjct: 239 KGAGTMLETVRE-AGGDVIGLDWHVDLATARNQLGPGVAVQGNLDPTVLFAPQAVIEQQV 297
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+LD P FIFNLGHGI P V +N +V+ V+
Sbjct: 298 QRVLDENRGLPGFIFNLGHGILPTVPAENARFMVQCVQ 335
>gi|194477307|ref|YP_002049486.1| uroporphyrinogen decarboxylase [Paulinella chromatophora]
gi|171192314|gb|ACB43276.1| uroporphyrinogen decarboxylase [Paulinella chromatophora]
Length = 355
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 176/336 (52%), Gaps = 4/336 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R F + PE + E+++
Sbjct: 1 MAETLPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDLHPGFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP + D ILFSDIL +G N VE++GP ++P + + N L+
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGIGVNFDIVESKGPLIEPAIRTDSQVKNLKT-LYPEKS 119
Query: 121 LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LP I + ++ LR+ + + T++GF GAPWT+A+YM+ G K++ + A+Q +
Sbjct: 120 LPYIGEVLTRLRQSVGDQATVLGFVGAPWTLAAYMVEGKSSKNYAIIKAMAFQEPDLLHR 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ LSD A Y+ QI G V+Q+FD+ AG L +++ +AA R+++ V+ KYPN
Sbjct: 180 LLEHLSDSIATYVCYQIEHGAQVVQLFDSWAGQLSPVDYDLFAAPYQKRVVNKVKAKYPN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I + G+ +++ + T + I LDW+V ++ L VQGN+DP L
Sbjct: 240 TPLILYISGSAGLVERMSK-TGVDIISLDWTVDMAEGCARLPAHLGVQGNVDPGILFGSP 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + + ++ + NLGHGI P N
Sbjct: 299 EAIKSRIVDVVKKAKGRSHVLNLGHGILPGTPEDNA 334
>gi|308812943|ref|XP_003083778.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116055660|emb|CAL57745.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 390
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 178/338 (52%), Gaps = 7/338 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P W+MRQAGRY+ EYR + K +F + T + VE+T+QP R +
Sbjct: 54 MVRAARGEKVERAPAWMMRQAGRYMKEYRDLAAKHPSFRERSETTDLIVEITMQPFRAFK 113
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL A G + + +GP ++ ITT+E + +D L+ + + +
Sbjct: 114 PDGVILFSDILTPFPAFGIDFEIDDYKGPMLEKTITTEEDLKMLREVD--LSKVEFVADA 171
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ILR+++ + ++GF GAPWT+ +Y++ G + + + LL ++D
Sbjct: 172 LKILRQEVGDEAAVLGFVGAPWTLCTYIVEGKSTSTYKTIKSMCFTAPDVLRTLLSHVAD 231
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
A Y+ QI AG VIQIFD+ G L H +E ++ + R+++ V++ +P +A
Sbjct: 232 ALAVYIGFQIDAGAQVIQIFDSWGGQLPPHMWEEWSKPYIERVVNKVKQTHPGVPITLYA 291
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G+G +L+ L + IGLDW++ + + VQGN+DP+ L G+ + V
Sbjct: 292 NGSGGLLERMATLP-VDTIGLDWTIDMEDGRRRVGDKAVQGNVDPVVLFAGDDAIEKAVR 350
Query: 307 AILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
+ G + NLGHG+ TP+ K+ D+ KT+
Sbjct: 351 DVCRKAGPTGHVLNLGHGVLVGTPEEAVKHFFDVSKTI 388
>gi|148271766|ref|YP_001221327.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829696|emb|CAN00612.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 375
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 183/354 (51%), Gaps = 20/354 (5%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
+N R ++E +G P+W MRQAGR LPEYR++R + LD C PE E+
Sbjct: 29 LNTRTASSLLVEAYRGRRGERAPVWFMRQAGRSLPEYRELRVGTR-MLDACLDPEMASEI 87
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
TLQP+RR++ DA I FSDI++ G V V GP ++ P+ T P++D
Sbjct: 88 TLQPVRRHHVDAGIFFSDIVIPLKLAGVGVDIVAGRGPVLEKPVRTAADVAALPSLDP-- 145
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L PI Q+++ +L LIGF GAP+T+A+Y++ GG KDH R + + A+
Sbjct: 146 AALEPIRQAVARTVAEL-GDTPLIGFAGAPFTLAAYLVEGGPSKDHIAARGLMHADPDAW 204
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR--- 234
+ L+ + ++++ +L AQ+ AG Q+FD+ AG L ++ A + + VR
Sbjct: 205 DALMRWCAEITGVFLHAQVMAGASAAQLFDSWAGGLSLADYTQRVAPASALALDHVRTIT 264
Query: 235 ----RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNL 289
R P + F G G +L + +A+G+DW +PL A L PVQGN+
Sbjct: 265 AADGRTVP---LVHFGVGTGELLGAMHDV-GVDAVGVDWRIPLDEASRRLGGSVPVQGNV 320
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L ++ V +L+ + P I NLGHG+ P+ DP + +V VR
Sbjct: 321 DPALLAAPWPILEAHVRDVLERGKAAPAHILNLGHGVPPETDPTVLTRIVDLVR 374
>gi|282875784|ref|ZP_06284651.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis SK135]
gi|281294809|gb|EFA87336.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis SK135]
gi|329724898|gb|EGG61401.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU144]
Length = 344
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T + + ++P D+
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L ++S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 174 TWFALMNHLVNISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 234 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 292 APWDVIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHN 340
>gi|299822151|ref|ZP_07054037.1| uroporphyrinogen decarboxylase [Listeria grayi DSM 20601]
gi|299815680|gb|EFI82918.1| uroporphyrinogen decarboxylase [Listeria grayi DSM 20601]
Length = 350
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 180/327 (55%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR +++K+ F ++ + PE +T P+ Y DAA+L+ DI+
Sbjct: 22 PAWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCSYVTRLPVENYGVDAAVLYKDIMSP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNP-NIDLFLNYLLPIFQSISILRKKLPNH 137
+G +V GP + PI Q++ L + + Y+L ++I +LR++ +
Sbjct: 81 LPGMGVDVEIKTGIGPVIAHPIRRYQDVESLAAFDAKSQVPYIL---ETIKLLREEQLD- 136
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GAP+T+ASY++ GG K++ Q + YQ+ + L+D L+ ++A+YL AQI
Sbjct: 137 VPLIGFGGAPFTLASYLVEGGPSKNYYQTKALMYQDEATWFALMDKLATMTADYLSAQIE 196
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG +Q+FD+ G L ++ Y S+ I + V+ K+P I A AG++L +
Sbjct: 197 AGASAVQLFDSWVGALSREDYHYYIKPSIRMITTKVKAKHPQTPIIMQAVAAGHLLPEWN 256
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + +G+DW + ++ A ++ E +QGNLDP L+ + I + + F
Sbjct: 257 DVP-IDVVGIDWRMSIAAARDILPEKALQGNLDPALLLAPQKSFDKAKTIIGEAVKQPGF 315
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P+V P + L V SE
Sbjct: 316 IFNLGHGVFPEVSPSTLKQLTALVHSE 342
>gi|289724661|gb|ADD18305.1| uroporphyrinogen decarboxylase [Glossina morsitans morsitans]
Length = 350
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 182/336 (54%), Gaps = 16/336 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ +G + P+W+MRQAGRYLPE+R+IRK++ +F +C TP E+T+QP+
Sbjct: 5 KNDNLLKAARGEPVERVPVWVMRQAGRYLPEFREIRKQY-DFFTVCRTPSIACEVTMQPL 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLL 121
RR++ DA+I+FSDILVI ALG V + GP +P+ T ++ L P + ++ +
Sbjct: 64 RRFDLDASIIFSDILVIPQALGLTVEMRPDVGPVFPEPLQTPADLKRLAP--EGAVDRVA 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I+++R L + LIGF GAPWT+ YMI GG K + + + LL
Sbjct: 122 YVGEAITMMRHVLDGKVPLIGFTGAPWTLMGYMIEGGGSKTMSKTKSWLLCYPEDSEELL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK----- 236
L+ V +YL Q+ AG ++QIF++ A L + +F + + I + R+
Sbjct: 182 TMLTSVIIDYLEMQVKAGAQMLQIFESSAEHLTKSDFLKWCLPYLKDIHDQLTRRLKEQS 241
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMR 293
P FAKGA + L L + I LDW+V A E + GP +QGNLDP
Sbjct: 242 LPLVPMTLFAKGAAHSLTEQSTL-GYDVISLDWTVDPEKARE--QVGPNITLQGNLDPQD 298
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQV 329
+ + + V ++ G +I NLGHGITPQ
Sbjct: 299 MYKTPEEIRVLVTDMVRKFGKIRYIANLGHGITPQT 334
>gi|293366189|ref|ZP_06612875.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319711|gb|EFE60071.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 353
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 193/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 10 VRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 68
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T + + ++P D+
Sbjct: 69 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRDV 128
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 129 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 182
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 183 TWFALMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 242
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 243 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLL 300
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 301 APWDVIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHN 349
>gi|206602106|gb|EDZ38588.1| Uroporphyrinogen decarboxylase [Leptospirillum sp. Group II '5-way
CG']
Length = 356
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 180/326 (55%), Gaps = 12/326 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G PP+W+MRQAGRY+PEY++IRKK +FL +C TP+ + T+ P+
Sbjct: 11 LRACRGEKTERPPVWIMRQAGRYMPEYQEIRKK-TSFLGLCKTPDLAAQATMLPVDMLGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL+ +A+G + F E++GP P+ ++ LL P + + +
Sbjct: 70 DAAILFSDILIPVEAMGMELEFSEHKGPSFPRPVQSRMDVDRLLVPEPVAHTGF---VAE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + ++L + LIGF GAP+T+A+YM+ G KD + + + + + LLD ++
Sbjct: 127 AIREINRRLSGRLPLIGFSGAPFTLATYMVEGEISKDFSRVKQMMFSDPETLHTLLDRIT 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ YL QI AG+ QIFDT AG L + ++A V RI+ +++R I +
Sbjct: 187 ETVIRYLEMQIEAGIHAYQIFDTWAGSLSPVHYRSFALPYVRRIVDSLQRY--GIPSILY 244
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G+ +L++ +N + +DW + L+ + + +QGNLDP+ L+ ++ +
Sbjct: 245 VNGSCALLEDM-VTAGTNVVSVDWRMSLANVRDRVPASVSIQGNLDPVSLLGTPAILREE 303
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQV 329
+L D+ G ++FNLGHGI P
Sbjct: 304 TRRVLEDMKGRPGYVFNLGHGILPST 329
>gi|297567363|ref|YP_003686335.1| uroporphyrinogen decarboxylase [Meiothermus silvanus DSM 9946]
gi|296851812|gb|ADH64827.1| uroporphyrinogen decarboxylase [Meiothermus silvanus DSM 9946]
Length = 356
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 181/330 (54%), Gaps = 19/330 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY ++ + +F +M TPE E+TLQP+RR+ DAAILFSDI+
Sbjct: 31 PIWVMRQAGRYLPEYLAVKAR-ASFWEMVRTPELAAEVTLQPLRRFPLDAAILFSDIMTP 89
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPN-IDLFLNYLLPIFQSISILRKKL 134
A+G + F N GP + +PI + + + + P I F ++I ++R++L
Sbjct: 90 LQAMGVRIEF--NPGPLIAEPIRSLRHIEALRVPEPEEIAPFGE------EAIRLVRREL 141
Query: 135 P-NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+I LIGF GAP T+A+Y+I G K++ R F Q A + LL+ L++VS YL
Sbjct: 142 EGKNIPLIGFGGAPLTLATYLIQGSGSKEYEAFRAFLRQEPAAAHTLLEKLTEVSIRYLQ 201
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
Q+ AG IQ+FD+ AG L E + +A R++ A+ A I A GA ++
Sbjct: 202 GQLRAGAQAIQLFDSWAGLLDEATYRAFALPYTTRVLEALAGW--GAPRIYLAVGASHLY 259
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
L + +DW + L + +QGNLDP L+ +V+ + +L
Sbjct: 260 PVIAEL-PLEVVSVDWRLGLERIRPYFPQRTLQGNLDPAVLLAPPEVIAQEAHRVLRAGL 318
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GP IFNLGHGI Q P+++ L++TV +
Sbjct: 319 GGPHIFNLGHGILRQTPPEHLAHLIETVHA 348
>gi|296332434|ref|ZP_06874895.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673714|ref|YP_003865386.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150352|gb|EFG91240.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411958|gb|ADM37077.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 353
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 187/341 (54%), Gaps = 19/341 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R+ + L+ +G + P+W MRQAGR PEYR++++K+ F D+ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-DITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + +++ ++P
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D+ + ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y
Sbjct: 120 QDVPY-----VLETIKLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S
Sbjct: 174 MPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + N I F GA ++ ++ L + +GLDW + + A VQGNLDP
Sbjct: 234 LAEE--NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLSIDEARSKGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPK 332
L+ +V+ ILD + S FIFNLGHG+ P V P+
Sbjct: 291 ILLAPWEVIEKKTTEILDQGMKSDSFIFNLGHGVFPDVSPE 331
>gi|87124030|ref|ZP_01079880.1| Uroporphyrinogen decarboxylase HemE [Synechococcus sp. RS9917]
gi|86168599|gb|EAQ69856.1| Uroporphyrinogen decarboxylase HemE [Synechococcus sp. RS9917]
Length = 352
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 184/330 (55%), Gaps = 8/330 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V+ PP+W+MRQAGRY+ YR +R ++ +F + P+ + E+++QP +
Sbjct: 8 LLRAARGEVVERPPVWMMRQAGRYMKIYRDLRDRYPSFRERSENPDLSYEISMQPFHAFK 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDIL +G + +E++GP+++ PI T +++ L P L LP +
Sbjct: 68 PDGVILFSDILTPLPGMGIDFDIIESKGPQINAPIRTIEQVKALQP---LEPAESLPFVG 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ + LR+ + N T++GF GAPWT+A+Y++ G K++ + A++ + LLD
Sbjct: 125 EVLGRLRQSVGNQATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFRKPELLHQLLDHF 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A YL QI AG V+Q+FD+ AG L +++ +AA +++ V++ +P+ FI
Sbjct: 185 AESIATYLCYQIDAGAQVVQMFDSWAGQLSPTDYDTFAAPYQKKVVDRVKQTHPDTPFIL 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +++ R T + + LDW+V ++ L + VQGN+DP L + + D
Sbjct: 245 YISGSAGVIERMGR-TGVDIVSLDWTVDMADGCARLPEHLGVQGNVDPGLLFGTPEAIRD 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
++ + I NLGHGI P +N
Sbjct: 304 RIDDCVRKAHGRRHILNLGHGILPGTPEEN 333
>gi|254527123|ref|ZP_05139175.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9202]
gi|221538547|gb|EEE41000.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9202]
Length = 346
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 179/333 (53%), Gaps = 12/333 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++QP +
Sbjct: 8 LLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISMQPFHAFK 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
D ILFSDIL +G N +E++GP + DPI + + LNP+ L
Sbjct: 68 PDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKELNPSESLSF----- 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ + LLD
Sbjct: 123 VGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHKLLD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ EYL QI +G V+QIFD+ AG L +++ +A +++ V+ ++P
Sbjct: 183 HFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKAEHPETPV 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVM 301
I + G+ +++ + T + I LDW+V + A + G +QGN+DP L + +
Sbjct: 243 ILYISGSAGVIERMSK-TGIDIISLDWTVDIEEACKRIPSGIGIQGNVDPGILFGNKESI 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++ + +I NLGHGI P +N
Sbjct: 302 KERIDNTFNKTKDRKYILNLGHGILPGTPEENA 334
>gi|225020281|ref|ZP_03709473.1| hypothetical protein CORMATOL_00284 [Corynebacterium matruchotii
ATCC 33806]
gi|224947025|gb|EEG28234.1| hypothetical protein CORMATOL_00284 [Corynebacterium matruchotii
ATCC 33806]
Length = 330
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 174/334 (52%), Gaps = 27/334 (8%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYRQ+R + LD C+ PE E+TLQP+RR++ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRQVRAGI-DMLDSCFMPELLAEITLQPVRRHDVDAAILFSDIVVPLKAA 59
Query: 85 GRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V V GP + PI + ++ +L+ +ID + I I+ L +
Sbjct: 60 GVDVEIVSGRGPVVAQPILSMSDVDKLPILDSDID-------GVMAGIGIIIDNLTSSQA 112
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG ++H + + + ++ L+ L+ +L QI AG
Sbjct: 113 LIGFAGAPFTLASYLVEGGPSRNHEKTKAMMHAQPETWHALMRKLTPTITHFLSMQISAG 172
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+D +Q+FD+ AG L E ++ Y I +A+ + I F G G +L +
Sbjct: 173 IDAMQLFDSWAGFLTERDYREYVLPYSTEIFAAIAGA--DIPRIHFGVGTGELLGAMSQ- 229
Query: 260 TDSNAIGLDWSVPLSFALEL--QKEGP--VQGNLDPMRLVVGNQVMIDGVNAILD----V 311
++ G+DW VPL A GP VQGNLDP L G +V+ V I
Sbjct: 230 AGADVTGVDWRVPLDVAARRIHHAVGPKSVQGNLDPALLCAGEEVVRAEVTRICAEADRA 289
Query: 312 LGSG---PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +G IFNLGHG+ P DP+ + V V
Sbjct: 290 ISAGHAIGHIFNLGHGVLPTTDPEMITRAVSLVH 323
>gi|313622754|gb|EFR93095.1| uroporphyrinogen decarboxylase [Listeria innocua FSL J1-023]
Length = 350
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVKEVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW ++ A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETITTARQKVPTKAIQGNLDPSTLLAPEKCLAETERILQEGVLEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L K + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTKYIHERSE 344
>gi|148239091|ref|YP_001224478.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7803]
gi|166234292|sp|A5GJR6|DCUP_SYNPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|147847630|emb|CAK23181.1| Uroporphyrinogen decarboxylase [Synechococcus sp. WH 7803]
Length = 352
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI T ++ LNP +
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRTMAQVDALHPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 121 PF-----VGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPA 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A+YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHKLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +L+ T + I LDW+V ++ AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVLERM-ATTGVDIISLDWTVDMAEALARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 295 FGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGASFFRSGKS 343
>gi|242243054|ref|ZP_04797499.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis W23144]
gi|242233512|gb|EES35824.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis W23144]
Length = 353
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 194/349 (55%), Gaps = 15/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + IL+ ++G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 10 VRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 68
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAA+L+ DI+ +G +V GP + +PI T +++ ++P D+
Sbjct: 69 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVEKLSQIDPKRDV 128
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 129 PY-----VLDTIKLLTEEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEE 182
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ +++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++
Sbjct: 183 TWFAIMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKA 242
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
Y + I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 243 YY-DVPIILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADKMGVNKAIQGNLDPSLLL 300
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + IL+ L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 301 APWDVIESRLKDILNQGLDRGKHIFNLGHGVFPEVKPETLRKVTEFVHN 349
>gi|149182662|ref|ZP_01861130.1| uroporphyrinogen decarboxylase [Bacillus sp. SG-1]
gi|148849631|gb|EDL63813.1| uroporphyrinogen decarboxylase [Bacillus sp. SG-1]
Length = 347
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 189/349 (54%), Gaps = 16/349 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MKKMNDTFLKAARGEKTDYTPVWYMRQAGRSQPEYRELKEKYSLF-EITHQPEICAYVTR 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDL 115
P+ +Y+ DAAIL+ DI+ ++G +V GP +D PI + +++ ++P D+
Sbjct: 60 LPVEQYDVDAAILYKDIMSPLPSIGVDVDIKPGIGPVIDNPIRSVADVEKLGEIDPESDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
I +I +L K+ + + LIGF GAP+T+ASYMI GG K++ + + F Y +
Sbjct: 120 PY-----ILDTIKLLTKEQLS-VPLIGFAGAPFTMASYMIEGGPSKNYNKTKAFMYAEPK 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
A+ L+D L+D++ Y AQI AG QIFD+ G L ++ + ++ +I S +++
Sbjct: 174 AWFTLMDKLADMTITYGRAQIKAGASAFQIFDSWVGALNVQDYRTFIKPTMEKIFSELKK 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
+ N I F GA ++ + L + +GLDW +P+ AL V GNLDP L+
Sbjct: 234 E--NVPLIMFGVGASHLSMEWHDLP-IDVVGLDWRLPVQEALSNGITKTVMGNLDPAILL 290
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + AILD + P IFNLGHG+ P V P+ + L V
Sbjct: 291 APWDVIEEKAKAILDQGIANPGHIFNLGHGVFPSVKPETLKRLTAFVHE 339
>gi|16801379|ref|NP_471647.1| uroporphyrinogen decarboxylase [Listeria innocua Clip11262]
gi|23814002|sp|Q929G1|DCUP_LISIN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|16414827|emb|CAC97543.1| hemE [Listeria innocua Clip11262]
Length = 350
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAQYIRPVIEMIVKEVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW ++ A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETITTARQKVPTKAIQGNLDPSTLLAPEKCIAETERILQEGILEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L K + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTKYIHERSE 344
>gi|163839966|ref|YP_001624371.1| uroporphyrinogen decarboxylase [Renibacterium salmoninarum ATCC
33209]
gi|162953442|gb|ABY22957.1| uroporphyrinogen decarboxylase [Renibacterium salmoninarum ATCC
33209]
Length = 378
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 178/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ + LD C P+ E+TLQP+RR++ DAAI FSDI++
Sbjct: 49 PVWFMRQAGRSLPEYRKVREGI-SMLDSCLKPDLASEITLQPVRRHDVDAAIFFSDIVIP 107
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP ++ P+ T P L + L PI Q++++ +L N
Sbjct: 108 LKLAGVGVDIVPGVGPVLEKPVRTLADVRALPK--LTEDSLEPIRQAVALTVAELGN-TP 164
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + +A+ L + +D S +L AQ+ AG
Sbjct: 165 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPQAWQELAAWAADASGMFLRAQLEAG 224
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG +++ + A + + + VR A I F G +L R +
Sbjct: 225 ASAAQLFDSWAGSLGLSDYQTHVAPASKQALDHVRDL--GAPLIHFGTGTSELLLAMRDV 282
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF- 317
+ IG+D+ +PL A L P+QGN+DP L V+ ILDVL G
Sbjct: 283 -GVDVIGVDYRLPLDEANRRLGGMTPLQGNIDPALLPAPWPVL---EAHILDVLRRGESA 338
Query: 318 ---IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P+ DP + +V+ V S
Sbjct: 339 PGNVVNLGHGVPPETDPSVLSRIVELVHS 367
>gi|294658305|ref|XP_460636.2| DEHA2F06402p [Debaryomyces hansenii CBS767]
gi|202953031|emb|CAG88968.2| DEHA2F06402p [Debaryomyces hansenii]
Length = 362
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 188/348 (54%), Gaps = 21/348 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP+W+MRQAGRYLPEY +++ K +F + C E E+T+QPI +N
Sbjct: 12 ILRAARGEKVERPPMWIMRQAGRYLPEYHEVKGKL-DFFETCRNAEIAAEITIQPIEHFN 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI +G + VE +GP +DP+ + +++ +N D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQVMGFEIEMVEGKGPVFVDPLRSPKDLSRVNYKPDI-LKGLDWA 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I++ R KL + L+GFCGAPWT+ YM G K + + Y+++ + LL
Sbjct: 130 FKAITLTRTKLNGRVPLLGFCGAPWTLLVYMTEGQGSKMFRYAKEWIYEHTEESHKLLQA 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D E+L Q+ AG ++Q+F++ A LG +EF ++ + +I + ++
Sbjct: 190 TTDACIEFLAQQVVAGAQMLQVFESWASELGPNEFNEFSLPYLRQISEKLPKRLQELGIT 249
Query: 244 S------FAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLDPMR 293
FAKGA Y L + L DS + + LDW A+++ + +QGNLDP
Sbjct: 250 EKIPLTVFAKGAWYALDS---LCDSGYDTVSLDWLYKPEDAVKVVNGRRITLQGNLDPGT 306
Query: 294 LVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVK 339
+ ++V+ V ++ G G +I N GHG P + P+ V +K
Sbjct: 307 IYGSDEVISKKVEQMIKGFGGGKQNYIINFGHGTHPFMKPEKVEHFLK 354
>gi|115377485|ref|ZP_01464687.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
gi|115365529|gb|EAU64562.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
Length = 348
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 15/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN+R +L+ + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+
Sbjct: 1 MNDR---LLKAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTV 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ R DAAI+FSDIL+ +A+G V + ++GP P+ T +I L P+
Sbjct: 57 QPVTRLGVDAAIIFSDILIPVEAMG-IVLELGDKGPHFPQPVRTAADIERLAVPDPVEGT 115
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + ++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++ +
Sbjct: 116 GF---VAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLLFEQPKLA 172
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L+D YL Q+ AG ++QIFD+ G L ++FE ++ + R++ ++
Sbjct: 173 HTFFQKLTDTLIPYLKMQVEAGASIVQIFDSWGGELSPYDFERFSLPYLTRMVKELQAT- 231
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F G L +R T ++ IGLDW +P L ++ VQGNLDP+ L +
Sbjct: 232 -GVPVIVFGTGMSTHLPLLKR-TGADVIGLDWRIPADDGRRILGQDVAVQGNLDPLHLFL 289
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G IFNLGHGI P DP+ LV+ V
Sbjct: 290 PREELEGRVVDILKRAGPVGHIFNLGHGILPPTDPEAAKFLVEAV 334
>gi|157413000|ref|YP_001483866.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9215]
gi|167012317|sp|A8G3U9|DCUP_PROM2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157387575|gb|ABV50280.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9215]
Length = 346
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 179/333 (53%), Gaps = 12/333 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++QP +
Sbjct: 8 LLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISMQPFHAFK 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
D ILFSDIL +G N +E++GP + DPI + + LNP+ L
Sbjct: 68 PDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKELNPSESLSF----- 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ + LLD
Sbjct: 123 VGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHKLLD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ EYL QI +G V+QIFD+ AG L +++ +A +++ V+ ++P
Sbjct: 183 HFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPEDYDIFAGPYQKKVVDIVKAEHPETPV 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVM 301
I + G+ +++ + T + I LDW+V + A + G +QGN+DP L + +
Sbjct: 243 ILYISGSAGVIERMAK-TGIDIISLDWTVDIEEACKRIPSGIGIQGNVDPGILFGNKESI 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++ + +I NLGHGI P +N
Sbjct: 302 KERIDNTFNKTKDRKYILNLGHGILPGTPEENA 334
>gi|68063873|ref|XP_673932.1| uroporphyrinogen decarboxylase [Plasmodium berghei strain ANKA]
gi|56492139|emb|CAH96991.1| uroporphyrinogen decarboxylase, putative [Plasmodium berghei]
Length = 419
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 194/344 (56%), Gaps = 25/344 (7%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N P W+MRQ+GRYLPEYR+++K + NF D+CY PE + +T+ P +R+ D ++FSDI
Sbjct: 85 NEIPFWMMRQSGRYLPEYRELKKNY-NFFDLCYNPELSSNITIMPYKRFLCDMVVIFSDI 143
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQ--EIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
L+I A+G +++FVEN GP + + LN N+ +N L ++ SI++ +KK+
Sbjct: 144 LIIFIAMGIDIKFVENVGPIFNKEINNLDDFKKLNLNLKEIINNLHFVYDSINLTKKKIN 203
Query: 136 NHITLIGFCGAPWTVASYMI--SGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
N + ++GFCG+P+T+ +Y+ + +K + + Y+NS + +L+ L ++ +L+
Sbjct: 204 NSVPVLGFCGSPFTLFTYLTKDNASKLKPYENSLKLIYENSEDTHQILNILCNICISHLL 263
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM- 252
QI G ++IQIFD++A + ++ F+ ++ + +I+ A++ PN I F K +
Sbjct: 264 NQIDGGANLIQIFDSNAEIVDKNIFKEFSLYYINKIVQAIKTYRPNTYIILFVKDNFHEN 323
Query: 253 LKN---------YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+KN +++L ++ G ++ L Q + +QG LDP L++ N+ +
Sbjct: 324 IKNLDIDILSITHKQLINN---GSNYYYDL-----FQNKIILQGALDPHILLLDNKENVQ 375
Query: 304 GVNA--ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I + +I NLGHGI P +NV ++ V+S K
Sbjct: 376 KYTSKMIQQISYKNKYIANLGHGILPNSKIENVYAFIQAVKSVK 419
>gi|254776014|ref|ZP_05217530.1| uroporphyrinogen decarboxylase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 357
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 17/334 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+RR++ DAAILFSDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVRRHDVDAAILFSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+ T ++ + L + PI ++ +L L +
Sbjct: 88 LLGAGIDLDIVAGVGPVIASPVRTAADVAAMK---TLERQRVQPIADAVRLLVSAL-GEV 143
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG + H + + + +++ L++ L+D++ +L Q+ A
Sbjct: 144 PLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEKLTDITVGFLRVQLDA 203
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKF-ISFAKGAGYMLKNY 256
GVD +Q+FD+ AG L + +Y R+ +A+ P F + A+ G M
Sbjct: 204 GVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADYGVPMTHFGVGTAELLGAMSAAL 263
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD----- 310
+ + +G+DW L+ A G +QGNLDP+ L+ G V+ A++D
Sbjct: 264 KP-APATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWPVVETAARAVVDDGRRA 322
Query: 311 -VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 323 VDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|320352977|ref|YP_004194316.1| uroporphyrinogen decarboxylase [Desulfobulbus propionicus DSM 2032]
gi|320121479|gb|ADW17025.1| uroporphyrinogen decarboxylase [Desulfobulbus propionicus DSM 2032]
Length = 341
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 193/337 (57%), Gaps = 12/337 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGRYLP+Y+++R + +FL++C TPE E+TLQP+ + F
Sbjct: 6 LQACRGERTAYTPVWFMRQAGRYLPQYQKVRGQV-SFLELCKTPELATEVTLQPVDLFGF 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL+ +A+ ++ F E GP DP+ +Q+ L+ P + + ++L +
Sbjct: 65 DAAILFSDILIPMEAMRLSLEFHEGRGPIFADPVRSQKAVDDLVVPVPEEAVPFVL---E 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LR++L + LIGF GAP+T+A+Y+I GG K + ++ R ++ L+ ++
Sbjct: 122 TIRLLRREL--RVPLIGFAGAPFTLATYLIEGGSSKVFLNTKKMMFREPRLYHNLMAKIT 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++ YL AQ AG +Q+FD+ G L ++E +A V II+ +R + I F
Sbjct: 180 ACTSAYLQAQARAGAQALQLFDSWVGILAPCDYEEFALPYVRSIITDLRATT-DVPIIYF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
A G L ++ +G DW +P+ A VQGNLDP+ L + + + + +
Sbjct: 239 ANN-GATLTRMTTTVGADVLGFDWRLPIGEAAARSGRHAVQGNLDPLALFLPKERLEERI 297
Query: 306 NAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+A+L D + +IFNLGHGI P+ P+ V V+ V
Sbjct: 298 HAMLTDARDARGYIFNLGHGILPETPPEQVRIAVEAV 334
>gi|319441609|ref|ZP_07990765.1| uroporphyrinogen decarboxylase [Corynebacterium variabile DSM
44702]
Length = 335
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 174/331 (52%), Gaps = 24/331 (7%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W+MRQAGR LPEYR++R + LD C+ P+ E+TLQP+RR++ DAAILFSDI+V
Sbjct: 1 MWMMRQAGRSLPEYRELRAGVE-MLDSCFRPDLLSEITLQPVRRHDADAAILFSDIVVPL 59
Query: 82 DALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
A G V V GP ++ P+ T P ++ L + + I + +L + L
Sbjct: 60 KAAGVAVDIVPGRGPVLEHPVRTPADIAALPTVEP--GQLESVVEGIGGVLDELRDDQVL 117
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAP+T+ASY+I GG K+HG + Y + ++ L++ L+ +L Q+ AG+
Sbjct: 118 IGFAGAPFTLASYLIEGGPSKNHGITKSLMYSEPQTWHALMEKLTPTVITFLRTQLEAGI 177
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
D +Q+FD+ AG L ++ + A RI AVR I F +L +
Sbjct: 178 DALQLFDSWAGFLSLKDYREFVAPYSQRIFDAVRPY--GVPMIHFGVNTAELLGEMAAV- 234
Query: 261 DSNAIGLDWSVPLSFA-----LELQKEG-----PVQGNLDPMRLVVGNQVMIDGV----- 305
+ IG+DW PL A +L+ G +QGNLDP L+ G +V+ V
Sbjct: 235 GPDIIGVDWKTPLDVAAARVTADLRDRGLRVPRAIQGNLDPAVLLAGPEVIAGHVRRICA 294
Query: 306 --NAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+A + + IFNLGHG+ P+ DP +
Sbjct: 295 EGDAAIAAGNATGHIFNLGHGVLPETDPDAI 325
>gi|289550451|ref|YP_003471355.1| Uroporphyrinogen III decarboxylase [Staphylococcus lugdunensis
HKU09-01]
gi|289179983|gb|ADC87228.1| Uroporphyrinogen III decarboxylase [Staphylococcus lugdunensis
HKU09-01]
Length = 344
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL ++G P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MHNKNNAILNTIKGEKATHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAAIL+ DI+ +G +V GP + +PI + ++ ++P D+
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIQSVNDVDKLTQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTQEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYRDEE 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L +S +Y++AQ+ AG ++IQIFD+ G L +++ Y ++ ++IS ++
Sbjct: 174 TWFALMNHLVSISIDYVVAQVEAGAELIQIFDSWVGALNVQDYKYYIKPAMQKLISGIKE 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW + + A + +QGNLDP L+
Sbjct: 234 KH-DVPIILFGVGASHLIDEWNDLP-IDVLGLDWRISIIQAQSMGISKTLQGNLDPALLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + + ILD L G IFNLGHG+ P+V+P +
Sbjct: 292 APWPVIEERLKNILDQGLMYGKHIFNLGHGVFPEVNPDTL 331
>gi|114556204|ref|XP_001154358.1| PREDICTED: uroporphyrinogen decarboxylase isoform 4 [Pan
troglodytes]
Length = 298
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 8/274 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
A I FAK + L+ + +GLDW+V
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTV 286
>gi|320583670|gb|EFW97883.1| Uroporphyrinogen decarboxylase [Pichia angusta DL-1]
Length = 389
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 183/345 (53%), Gaps = 26/345 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP+WLMRQAGRYLPEY +++ ++F + C PE +T+QPI ++
Sbjct: 40 ILRAARGEAVERPPVWLMRQAGRYLPEYHEVKGN-RDFFETCRDPEIASAITIQPIDHFD 98
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI A+G +V+ V+ GPR DP+ E + L+ N D+ L
Sbjct: 99 GLIDAAIIFSDILVIPQAMGMDVQMVDKVGPRFTDPLRVPEDLNRLHKNTDV-AKELHWA 157
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F SI+ R KL + L+GFCGAPWT+ YMI GG K + + + ++ A + LL
Sbjct: 158 FTSITTTRIKLQGRVPLLGFCGAPWTLMCYMIEGGGSKIYRFVKEWLFKYPEASHKLLQM 217
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS---------AVR 234
++DV+ E+L Q+ AG ++Q+F++ G L +F ++ + +I +
Sbjct: 218 ITDVAVEFLALQVKAGAQMLQVFESWGGELSPADFREFSLPYLRQISQKLPLRLKELGIT 277
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
K P FAKG+ Y L L +S + + LDW A++ + +QGNLDP
Sbjct: 278 EKIP---LTVFAKGSFYALDE---LCESGYDVVSLDWLYEPEEAVKVVNGRVALQGNLDP 331
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ + + ++ G G +I N GHG P +DP+ +
Sbjct: 332 CVMYGSRETIRRKTEEMIKGFGGGKKNYIINFGHGTHPFMDPEQI 376
>gi|320033479|gb|EFW15427.1| uroporphyrinogen decarboxylase [Coccidioides posadasii str.
Silveira]
Length = 344
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 176/345 (51%), Gaps = 45/345 (13%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ +G + PPIW+MRQAGRYLPEY + K ++F + C PE LTLQPI RY
Sbjct: 13 LLKAARGEKVQRPPIWIMRQAGRYLPEYHEA-KGTRDFFECCRDPEVASTLTLQPIERYE 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V VE +GP P Q ++ +D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVKAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ +
Sbjct: 132 Y---VYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTW--------- 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA------ 232
YL Q+ AG ++Q+FD+ AG L F +A + R I+A
Sbjct: 180 ------------YLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYL-RYIAANLPKRV 226
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-SVPLSFALELQKEGPVQGNLDP 291
V Y FAKGA Y L + + + N +GLDW P +QGN DP
Sbjct: 227 VELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADP 285
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
L + + V ++ G G +I NLGHGITP V+P+++
Sbjct: 286 GCLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDL 330
>gi|300866848|ref|ZP_07111525.1| Uroporphyrinogen decarboxylase [Oscillatoria sp. PCC 6506]
gi|300335158|emb|CBN56685.1| Uroporphyrinogen decarboxylase [Oscillatoria sp. PCC 6506]
Length = 351
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 179/339 (52%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V+ PP+W+MRQAGRY+ YR +R K+ +F D + VE++LQP R +
Sbjct: 10 LLRAARGEVLERPPVWMMRQAGRYMKAYRDLRDKYPSFRDRSEKTDIAVEISLQPFRAFE 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL +G N VE+ GP +DP + ++I L+P L LP +
Sbjct: 70 PDGVILFSDILTPLPGIGINFDIVESRGPMIDPPIRSVEQIEKLHP---LEPAESLPFIR 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
I LR+++ + T++GF GAPWT+A+Y I G KD+ + A+ + L L
Sbjct: 127 EILQTLRQEVGDRSTVLGFVGAPWTLAAYAIEGKSSKDYTVIKGMAFSEPAMLHQFLSKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+ +P+ I
Sbjct: 187 ADAIAIYVRYQIDCGAQVVQMFDSWAGQLSPQDYETFALPYQRQVVEQVKATHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L + +
Sbjct: 247 YINGSAGLLERMPK-SGVDLVSVDWTVDMAEARARLGSKVGVQGNIDPCVLFGSKDFIRE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHG+ +NV KT +
Sbjct: 306 RILETIRKAGNKGHILNLGHGVLQNTPEENVAFFFKTAK 344
>gi|321314735|ref|YP_004207022.1| uroporphyrinogen decarboxylase [Bacillus subtilis BSn5]
gi|320021009|gb|ADV95995.1| uroporphyrinogen decarboxylase [Bacillus subtilis BSn5]
Length = 353
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 190/352 (53%), Gaps = 19/352 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R+ + L+ +G + P+W MRQAGR PEYR++++K+ F D+ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-DITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + +++ ++P
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLSDIEKLGQIDPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D+ + ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y
Sbjct: 120 QDVPY-----VLETIKLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S
Sbjct: 174 MPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + N I F GA ++ ++ L + +GLDW + + A VQGNLDP
Sbjct: 234 LAEE--NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ +V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 291 ILLAPWEVIEKKTKEILDQGMKSDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 342
>gi|328793755|ref|XP_001122233.2| PREDICTED: uroporphyrinogen decarboxylase [Apis mellifera]
Length = 346
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 178/348 (51%), Gaps = 28/348 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ ++G PIW+MRQAGRYLPE+++IR K +F +C TP E+TLQPI+R++
Sbjct: 14 ILKAIRGESTERIPIWIMRQAGRYLPEFQEIRSKH-DFFSICQTPTLACEVTLQPIKRFD 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLP 122
DA I+FSDILVI A+G V + GP + DP T + L+ PN++ L Y
Sbjct: 73 LDAGIIFSDILVIPQAMGLTVEMIPGMGPVLPKPLKDP--TDLVRLIQPNVEKDLKY--- 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I++ R KL + LIGF GA WT+ SYMI GG + R + Y+ + LL
Sbjct: 128 VGDAITLTRYKLEGKVPLIGFTGAAWTLMSYMIQGGGSSTMIRAREWLYKYPDDSHKLLQ 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY----- 237
+++V +YL+ Q+ AG A E Y+ + + I VR++
Sbjct: 188 LITNVIIDYLVMQVKAG----------AQXXXXXXXEIYSFKYLKEISEKVRQRLKKENI 237
Query: 238 PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLV 295
P I+F KGA L+ + +GLDW++ P+ + E +QGN DP L
Sbjct: 238 PEVPMIAFPKGATINSLEMLAKSKTYEVLGLDWTIDPIEARKKFGSEIILQGNFDPCALY 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q +I+ + G +I NLGHGI P +V +K + S
Sbjct: 298 GSEQEIINRAKDMALKFGKIRYIANLGHGILPDTPIASVTAFIKGIHS 345
>gi|73977148|ref|XP_861922.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 6 [Canis familiaris]
Length = 321
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 167/340 (49%), Gaps = 45/340 (13%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG +I D H +A + +
Sbjct: 194 ILTDALVPYLVGQVAAGAQIIFAKDGH-----------FALEELAQ-------------- 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
AGY +GLDW+V A E + K +QGNLDP L + +
Sbjct: 229 ------AGY-----------EVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEI 271
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 GRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 311
>gi|310823311|ref|YP_003955669.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
gi|309396383|gb|ADO73842.1| Uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
Length = 355
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 186/345 (53%), Gaps = 15/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN+R +L+ + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+
Sbjct: 8 MNDR---LLKAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTV 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFL 117
QP+ R DAAI+FSDIL+ +A+G V + ++GP P+ T +I L P+
Sbjct: 64 QPVTRLGVDAAIIFSDILIPVEAMG-IVLELGDKGPHFPQPVRTAADIERLAVPDPVEGT 122
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + ++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++ +
Sbjct: 123 GF---VAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLLFEQPKLA 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L+D YL Q+ AG ++QIFD+ G L ++FE ++ + R++ ++
Sbjct: 180 HTFFQKLTDTLIPYLKMQVEAGASIVQIFDSWGGELSPYDFERFSLPYLTRMVKELQAT- 238
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F G L +R T ++ IGLDW +P L ++ VQGNLDP+ L +
Sbjct: 239 -GVPVIVFGTGMSTHLPLLKR-TGADVIGLDWRIPADDGRRILGQDVAVQGNLDPLHLFL 296
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G IFNLGHGI P DP+ LV+ V
Sbjct: 297 PREELEGRVVDILKRAGPVGHIFNLGHGILPPTDPEAAKFLVEAV 341
>gi|225874011|ref|YP_002755470.1| uroporphyrinogen decarboxylase [Acidobacterium capsulatum ATCC
51196]
gi|225792797|gb|ACO32887.1| uroporphyrinogen decarboxylase [Acidobacterium capsulatum ATCC
51196]
Length = 362
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 178/333 (53%), Gaps = 11/333 (3%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
++ P+W +RQAGRY+PEY +RK + LD+C PE E+T+ + + DAAI+F+D
Sbjct: 33 VDRTPVWFLRQAGRYMPEYMAVRKH-HSLLDICKRPEIAAEVTITAAEKLDVDAAIIFAD 91
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
+L+ + +G F EGP + P+ T +++ L + L Y + Q+I +
Sbjct: 92 LLLPFECMGLPFEFQAGEGPVVHHPVRTLEDVERLRTDKASELIY---VAQAIEKVVAHF 148
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ + +IGFCGAP+T+ASYMI GG + + + + F Y+ A+ LLD L V Y
Sbjct: 149 KDRLGIIGFCGAPYTLASYMIEGGGTRQYIETKKFMYRQPDAWKQLLDKLVTVLTAYARQ 208
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
Q+ AG DVIQIFD+ AG L ++ + +++ V+ I F +L
Sbjct: 209 QVEAGADVIQIFDSWAGSLSVEDYREFVLPVTRQLVREVQAL--GVPVIYFGVDTASLLP 266
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ R T ++ +GLDW PL+ A G VQGNLDP+ L ++ + V IL
Sbjct: 267 SMRE-TGADVLGLDWRTPLAEAWHRLDYGCAVQGNLDPITLFAEPDLIRNRVENILAQAA 325
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ P IFNLGHGI P ++V +VK VR K
Sbjct: 326 NRPGHIFNLGHGIVPGTPVEHVQAVVKFVREYK 358
>gi|320108939|ref|YP_004184529.1| uroporphyrinogen decarboxylase [Terriglobus saanensis SP1PR4]
gi|319927460|gb|ADV84535.1| uroporphyrinogen decarboxylase [Terriglobus saanensis SP1PR4]
Length = 366
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 177/334 (52%), Gaps = 11/334 (3%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
++ P+W +RQAGRY+PEY +RK + L++C PE E+T+ DAAI+F+D
Sbjct: 33 VDRTPVWFLRQAGRYMPEYMAVRKH-HSLLEICRNPEVASEVTITAAEHLGVDAAIIFAD 91
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQSISI---LR 131
+L+ +G + FV EGP + PI T +++ L + L+Y+ + ++
Sbjct: 92 LLLPFTPMGLDFEFVNGEGPVVHAPIRTLEQVQALRTDRAEELSYVARAIEKVAAHFSAP 151
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
++ + + +IGF GAP+T+ASYMI G +++ + + Y N A+ L+ L V EY
Sbjct: 152 REDGDQLGIIGFIGAPFTLASYMIEGASSRNYIETKKLMYSNGAAWQLLMQKLISVLVEY 211
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
Q+ AG DVIQIFD+ AG L ++ + ++ R + I F
Sbjct: 212 AQQQVEAGADVIQIFDSWAGALSVSDYRQFVLPITKELVQ--RVQALGVPVIYFGVDTAS 269
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD 310
+LK R T ++ +GLDW VPL +L G VQGNLDP+ L ++ V +LD
Sbjct: 270 LLKTMRE-TGADVLGLDWRVPLDEGWKLAGSGCAVQGNLDPIALFAPEALLKQRVKEVLD 328
Query: 311 VLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHGI P +NV+++ + VR
Sbjct: 329 AAGNRNGHIFNLGHGIVPGTPVENVINVARWVRE 362
>gi|238063533|ref|ZP_04608242.1| uroporphyrinogen decarboxylase [Micromonospora sp. ATCC 39149]
gi|237885344|gb|EEP74172.1| uroporphyrinogen decarboxylase [Micromonospora sp. ATCC 39149]
Length = 363
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 167/336 (49%), Gaps = 34/336 (10%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IRK L+ C PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 38 PVWFMRQAGRSLPEYREIRKNV-GMLESCRRPELVAEITLQPVRRHGVDAAILFSDIVVP 96
Query: 81 ADALGRNVRFVENEGP-------------RMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
A G + V GP R+ PIT ++ ++ + L + L
Sbjct: 97 VAAAGVELDIVAGTGPVVAEPVRTAADVERIRPITRDDVSCVDEAVRLLVAEL------- 149
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LIGF GAP+T+ASY++ GG + H + + Y + ++ L L++V
Sbjct: 150 --------GDTPLIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCARLAEV 201
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ +L Q+ AGV +Q+FD+ AG L E ++ Y R+++ + I F
Sbjct: 202 TLAFLRVQVDAGVSAVQLFDSWAGALSEADYRRYVLPHSARVLAGLADA--GVPRIHFGV 259
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G +L ++ +G+DW PL A + + VQGNLDP L V+ V
Sbjct: 260 GTAELLPAMGE-AGADVVGVDWRTPLDVASRRIGADKAVQGNLDPCVLFAPWPVVEAEVR 318
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
IL + P +FNLGHG+ P+ DP + +V V
Sbjct: 319 RILAEGRATPGHVFNLGHGVLPETDPDVLTRVVALV 354
>gi|223994985|ref|XP_002287176.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976292|gb|EED94619.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 392
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 181/350 (51%), Gaps = 20/350 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G P+W+MRQAGR++ EYR + KK+ F + PE VE++LQP R Y
Sbjct: 42 LIRAARGETTERVPVWMMRQAGRHIKEYRDLCKKYPTFRERSEIPEVAVEVSLQPWRNYQ 101
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITT----QEIYLLNPNIDLFLNYLLPI 123
D ILFSDIL +G E GP + P+ T +++L++P+ +
Sbjct: 102 TDGCILFSDILTPLPGMGVEFDIDEKVGPVVKPMRTWDDVNKMHLIDPSKSIPFTA---- 157
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ ILR+++ ++GF G P+T+A+Y++ G K++ + + A+ + + +L
Sbjct: 158 -EALRILRQEVTPETAVLGFVGCPYTLATYLVEGKTSKEYLEIKKMAFTEPKLLHAILKN 216
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS+ AEY + QI G +IQIFD+ AG L +++ +AA I+ ++ KYP +
Sbjct: 217 LSESIAEYALFQIENGAQLIQIFDSWAGHLSPRDYDEFAAPYQKVILDKIKEKYPTVPTV 276
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----------LQKEGPVQGNLDPMR 293
++ K +G +++ T + + LDW+V ++ E L+ G VQGNLDP
Sbjct: 277 TYIKHSGALIERM-AATGVDVVSLDWTVDMAEGRERIAAGRAKAGLEGPGGVQGNLDPGV 335
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + I+ G + NLGHGI +N ++TVR+
Sbjct: 336 LFGDFATIKERAEEIMKKAGPTGHVMNLGHGIEAATPEENAAYFIETVRN 385
>gi|291295787|ref|YP_003507185.1| uroporphyrinogen decarboxylase [Meiothermus ruber DSM 1279]
gi|290470746|gb|ADD28165.1| uroporphyrinogen decarboxylase [Meiothermus ruber DSM 1279]
Length = 352
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 175/325 (53%), Gaps = 13/325 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEYR I+ + +F +M TPE E+TLQP+RR+ DAAILFSDI+
Sbjct: 26 PLWLMRQAGRYLPEYRAIKAR-ASFWEMVRTPELAAEITLQPLRRFPLDAAILFSDIMTP 84
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + F N GP + +P+ TQ L P Y + ++I ++R++L
Sbjct: 85 LPAMGVPIEF--NPGPVVAEPLRTQAQLEALRLPEPQEIAPY---VAEAIRLVRRELAGK 139
Query: 138 -ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAP T+A+Y++ G KD+ + R F Q + LL L++++ YL QI
Sbjct: 140 PVALIGFAGAPLTLATYLVQGSGAKDYEEFRAFLRQAPHLAHQLLQKLTELTIRYLRMQI 199
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AG + +Q+FD+ AG + + +++SA+ I A GA + L
Sbjct: 200 EAGAEAVQLFDSWAGLHDPDTYRTFGLPYNQKVLSALAGL--GVPRIYLAVGASH-LYPL 256
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
L A+ +DW + L+ +QGNLDP L+ +V+ + +L GP
Sbjct: 257 LALLPCEAVSVDWRLSLAQVRPFFPAHTLQGNLDPAVLLAPLEVITQEAHKVLRAGLGGP 316
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P++V LV+ V
Sbjct: 317 HIFNLGHGVIRTTPPEHVAHLVEVV 341
>gi|126657440|ref|ZP_01728596.1| uroporphyrinogen decarboxylase [Cyanothece sp. CCY0110]
gi|126621144|gb|EAZ91857.1| uroporphyrinogen decarboxylase [Cyanothece sp. CCY0110]
Length = 354
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 193/344 (56%), Gaps = 17/344 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F + P+ +E++LQP R +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLREKYPSFRERSENPDLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G VE++GP +DP T +++ L P + + L ++ I
Sbjct: 70 PDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
QS LR+++ N T++GF G+PWT+A+Y I G K++ + A+ + L +
Sbjct: 130 QS---LRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPEILHSFLSKI 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+ +P+ I
Sbjct: 187 ADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW+V ++ A + L K+ VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGQ-SGVDIVSVDWTVDMAEARQRLGKDMKVQGNIDP-GVLFGSQDFIK 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
ILD + G G I NLGHG+ TP+ + + + K V
Sbjct: 305 A--RILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAKQV 346
>gi|94967724|ref|YP_589772.1| uroporphyrinogen decarboxylase [Candidatus Koribacter versatilis
Ellin345]
gi|172046734|sp|Q1ITV2|DCUP_ACIBL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|94549774|gb|ABF39698.1| uroporphyrinogen decarboxylase [Candidatus Koribacter versatilis
Ellin345]
Length = 351
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 171/326 (52%), Gaps = 12/326 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY+ EYR +R+K+ + +++C P+ E+T+ N DAAI+F+D+L+
Sbjct: 21 PVWFMRQAGRYMSEYRAVREKY-SLVEICKKPDVAAEVTITAAEALNVDAAIIFADLLLP 79
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSIS-ILRKKLPNH 137
+ +G F EGP ++ PI I L + L Y+ + +S KLP
Sbjct: 80 LEVMGLPFHFSPGEGPVIEVPIRDAAHITRLRTDRAHDLGYVAEAVKKVSDHFGSKLP-- 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+IGFCGAP+T+ASYMI GG +++ + + Y + A++ LL L V +EY Q+
Sbjct: 138 --VIGFCGAPFTLASYMIEGGGSRNYLEVKKLMYNSPHAWDELLGKLVAVLSEYTADQVK 195
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG DVIQIFD+ GCL ++ Y ++ A++ I F + +L + R
Sbjct: 196 AGADVIQIFDSWVGCLSVEDYRRYVLPRTTELVKALQHST-RVPIIYFGTDSATLLPSMR 254
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
T + IGLDW VPL L + +QGNLDP+ L + IL P
Sbjct: 255 E-TGAEVIGLDWRVPLDQGWSLLEHSVAIQGNLDPVLLFAEWPELKSRAERILKQADGRP 313
Query: 317 -FIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHGI P +NV DL K V
Sbjct: 314 GHIFNLGHGILPHTPVQNVKDLAKFV 339
>gi|290893160|ref|ZP_06556148.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-071]
gi|290557322|gb|EFD90848.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-071]
Length = 350
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+S V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSEVKAAHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW ++ A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPAKCLEEAERILQEGVLEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|229010471|ref|ZP_04167674.1| Uroporphyrinogen decarboxylase [Bacillus mycoides DSM 2048]
gi|228750814|gb|EEM00637.1| Uroporphyrinogen decarboxylase [Bacillus mycoides DSM 2048]
Length = 348
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/344 (34%), Positives = 187/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+V +G P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKVCRGERTEYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|296501778|ref|YP_003663478.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis BMB171]
gi|296322830|gb|ADH05758.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis BMB171]
Length = 348
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 187/339 (55%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V +ILD P +IFNLGHG+ P+V+P + L
Sbjct: 297 IEEHVKSILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLT 335
>gi|254456526|ref|ZP_05069955.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083528|gb|EDZ60954.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 333
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 182/328 (55%), Gaps = 17/328 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPE+R+IRK +F+ +C + + E+TLQP++R++ DAAI+FSDIL++
Sbjct: 17 PIWIMRQAGRYLPEFREIRKLNPDFIKLCLNEDLSSEITLQPLKRFDLDAAIIFSDILML 76
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI-SILRKKLPNHIT 139
L + V F +N GP + I EI ++ F+ + P+++++ + ++ ++
Sbjct: 77 PYGLNQKVEFKKNFGPILGQININEISKISETD--FVEKIFPVYKALDKVSNNQITSNKN 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
IGF GAPWT+ YMI+ K ++ F +N +L L ++ Q+ G
Sbjct: 135 TIGFVGAPWTLLVYMINQQSPKKDLKHDFFEDKN--LIKKILSILEKFLMIHIKNQVKNG 192
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+VIQIFD+ AG L + ENY +++ V K N I F + +KNY++
Sbjct: 193 ANVIQIFDSWAGLLQGKDLENYIYFPTLNLVNYV--KSLNVPVICFPRE----IKNYKKF 246
Query: 260 TD---SNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ +A+ +D++V P ++Q P+QG LDP L+ + + LD+
Sbjct: 247 CEVVKPDAVSIDYNVDPKQILKDIQ--IPIQGGLDPKVLLSDKENLKKETIKYLDIFKDH 304
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+IFNLGHG+ P+ DP + LVK V+
Sbjct: 305 PYIFNLGHGVLPETDPNMMDHLVKIVKD 332
>gi|315657942|ref|ZP_07910816.1| uroporphyrinogen decarboxylase [Staphylococcus lugdunensis M23590]
gi|315496978|gb|EFU85299.1| uroporphyrinogen decarboxylase [Staphylococcus lugdunensis M23590]
Length = 344
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 190/340 (55%), Gaps = 15/340 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL ++G P+W MRQAGR PEYR++++K+ F ++ + PE +T
Sbjct: 1 MHNKNNAILNTIKGEKATHTPVWFMRQAGRSQPEYRKLKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
P+ Y DAAIL+ DI+ +G +V GP + +PI + ++ ++P D+
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIQSVNDVDKLTQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + Y++
Sbjct: 120 PY-----VLDTIKLLTQEKLN-VPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYRDEA 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L++ L +S +Y++AQ+ AG ++IQIFD+ G L +++ Y ++ ++IS ++
Sbjct: 174 TWFALMNHLVSISIDYVVAQVEAGAELIQIFDSWVGALNVQDYKYYIKPAMQKLISGIKE 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
K+ + I F GA +++ + L + +GLDW + + A + +QGNLDP L+
Sbjct: 234 KH-DVPIILFGVGASHLIDEWNDLP-IDVLGLDWRISIIQAQSMGISKTLQGNLDPALLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNV 334
V+ + + ILD L G IFNLGHG+ P+V+P +
Sbjct: 292 APWPVIEERLKNILDQGLMYGKHIFNLGHGVFPEVNPDTL 331
>gi|311740968|ref|ZP_07714793.1| uroporphyrinogen decarboxylase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303770|gb|EFQ79848.1| uroporphyrinogen decarboxylase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 344
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 179/352 (50%), Gaps = 26/352 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +++ G + PP+W MRQAGR LPEYR R+ + LD C+ PE E+TLQP+R
Sbjct: 6 RAPLIDAALGRTPSRPPVWFMRQAGRSLPEYRAAREGI-SMLDSCFMPELLAEITLQPVR 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP- 122
R++ DAAILFSDI+V A G V V GP M+ + ++E P L +P
Sbjct: 65 RHDVDAAILFSDIVVPLKAAGVKVDIVPGRGPVMEQAVRSREDVGKLP----LLEADVPE 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I+ + +L LIGF GAP+T+ASY+I GG K+H + + + + ++ L+
Sbjct: 121 VTEGIARILAELTETQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHADPETWHMLMR 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L +L Q+ AG+D +Q+FD+ AG L E ++ + I++ V + P
Sbjct: 181 RLVPTITRFLQVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSREILAGV--EIPR--- 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F G G +L S +G+D+ VP+ A E +QGNLDP L G+ +
Sbjct: 236 IHFGVGTGELLPAMSE-AGSEVMGVDYRVPMDAAAERVSARVLQGNLDPAMLFAGDDAVR 294
Query: 303 DGVNAIL----------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I D+ G I+NLGHG+ P D + + V + E
Sbjct: 295 QAVRTIRGEVDRARERGDIDG---HIWNLGHGVLPTTDAEAITRAVSIIHEE 343
>gi|302849420|ref|XP_002956240.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300258543|gb|EFJ42779.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 395
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 179/338 (52%), Gaps = 10/338 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P W+MRQAGRY YR++ KK +F + T E VE++LQP +
Sbjct: 52 MVRAARGEKVERAPCWMMRQAGRYQKSYRELAKKHPSFRERSETTELIVEISLQPWNSFR 111
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL +G N +N+GP +D PI + +++ L+ ++ + + +
Sbjct: 112 PDGVILFSDILTPLPGIGVNFDIDDNKGPIIDTPIRSLEQVKQLH---EMDFGKVDFVGR 168
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ LR ++ N ++GF G+PWT+A+Y+I GG + + + + LL L+
Sbjct: 169 ALTQLRAEVNNQAAVLGFVGSPWTLATYLIEGGSTSLYKTIKTMCFSAPDVLDALLTKLA 228
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A Y+ QI AG +QIFD+ G L E+E ++ + RII++V+ +YP +
Sbjct: 229 DAMAAYIKYQIRAGAQCVQIFDSWGGQLPPREWEKWSGPYLKRIIASVKAEYPTVPLTLY 288
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
A G+G +L+ T ++ +G+DW+ +S A + VQGN+DP L + D
Sbjct: 289 ANGSGGLLERL-AATGADVVGVDWTTDMSDARRRIDSNVSVQGNVDPAILFASKDAIEDA 347
Query: 305 VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVK 339
V L G I NLGHG+ TP+ ++ DL K
Sbjct: 348 VRDCLRKAGGNRHILNLGHGVLVGTPEEGVAHMFDLSK 385
>gi|322697618|gb|EFY89396.1| uroporphyrinogen decarboxylase [Metarhizium acridum CQMa 102]
Length = 339
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 175/331 (52%), Gaps = 23/331 (6%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILV 79
+W+MRQAGRYLPEY + + ++F + C PE LTLQP+ R+ DAAI+FSDILV
Sbjct: 1 MWVMRQAGRYLPEYHEAKGN-RDFFECCRDPEVASTLTLQPVERFAGLLDAAIIFSDILV 59
Query: 80 IADALGRNVRFVENEGPRM-DPITTQE------IYLLNPNIDLFLNYLLPIFQSISILRK 132
I A+G V V+ +GP +P+ T E + + + L+Y ++++I++ RK
Sbjct: 60 IPQAMGMQVEMVDKKGPHFPNPLKTPEDGQYDQVLKKDVQVAEELDY---VYKAITLTRK 116
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
K+ + LIGFCGAPWT+ YM+ GG K Q++ + Y+ LL ++D+ ++L
Sbjct: 117 KIAGRVPLIGFCGAPWTLFCYMVEGGGTKLFAQSKTWIYKYPEESKKLLSKIADICVDHL 176
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAK 247
Q+ AG ++ +FD+ AG L F ++ + I + K + F K
Sbjct: 177 ARQVEAGAQMVMVFDSWAGELSPSSFREFSEPYLLHIAQKLPSKLKSLGLDRVPMTVFPK 236
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGV 305
GA Y L + L N +G+DW + AL ++ V QGN DP L + + V
Sbjct: 237 GAWYALDSVCNL-GYNVVGMDWLQDPAAALRIRGSRNVVFQGNADPGVLYGTKEAITLAV 295
Query: 306 NAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
++ + +I NLGHGITP VDP N+
Sbjct: 296 EQMVKGFWAAKKGWIANLGHGITPGVDPDNL 326
>gi|318061062|ref|ZP_07979783.1| uroporphyrinogen decarboxylase [Streptomyces sp. SA3_actG]
gi|318079174|ref|ZP_07986506.1| uroporphyrinogen decarboxylase [Streptomyces sp. SA3_actF]
Length = 343
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 16/347 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M R L+ + + P+W MRQAGR LPEY + R+ L+ C PE E+T+
Sbjct: 1 MTPRDSVFLKACRREPVPYTPVWFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITM 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLN 118
QP+RR+ DAA+ FSDI+V A+G ++ GP + DP+ ++ L P ++
Sbjct: 60 QPVRRHKVDAAVYFSDIVVPLKAIGIDLDIKPGIGPVVADPVRGAADLARLRPLQPEDVS 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++I +L +L LIGF GAP+T+ASY++ GG ++H + + Y +
Sbjct: 120 Y---VTEAIGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWA 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D++ +L QI AG +Q+FD+ G L ++ Y + ++ +AV
Sbjct: 176 QLLDRLADITTGFLKVQIEAGASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY-- 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLV 295
I F G G +L + ++ +G+DW VPL A ++ GP +QGNLDP L
Sbjct: 234 GVPRIHFGVGTGELLHDLGE-AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLF 290
Query: 296 VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + +LD IFNLGHG+ P DP + DLV V
Sbjct: 291 ADEAAIREKTTEVLDAARDLEGHIFNLGHGVLPTTDPGVLTDLVADV 337
>gi|313205040|ref|YP_004043697.1| uroporphyrinogen decarboxylase [Paludibacter propionicigenes WB4]
gi|312444356|gb|ADQ80712.1| uroporphyrinogen decarboxylase [Paludibacter propionicigenes WB4]
Length = 344
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 187/347 (53%), Gaps = 28/347 (8%)
Query: 10 EVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFD 69
+ L+G PP+W MRQAGR LP Y ++R+++ +F ++ PE T E+TL P+ D
Sbjct: 8 DTLKGIKRERPPVWFMRQAGRVLPSYLKLREQY-SFRELMLNPELTAEVTLLPVNDLGVD 66
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRMD-PI--TTQEIYLLNPNIDLFLNYLLPIFQS 126
AAILFSDILVI +ALG +++F E +GP D P+ + L P++ L I+++
Sbjct: 67 AAILFSDILVIPEALGMDLKFTE-KGPIFDSPLQDAVNQYSSLQPDV----TKLEHIYKA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA------YQNSRAFNWL 180
+ ++R++ P + LIGFCGAP+T YM+ G + N F+ Y N +
Sbjct: 122 LDVIRERKPADVGLIGFCGAPFTTFCYMVEG-----NSANHTFSKAIKLFYNNPDISAKI 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++D+S Y + Q G+DV Q+F+THAG + + V RI +AVR N
Sbjct: 177 LEIITDLSIHYAVEQTKHGIDVFQLFETHAGLIPSDLYMERIMPHVSRITNAVRAN--NV 234
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDW--SVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F KG G L ++ +G+DW S+P + A+ +K G VQGNLDP L + +
Sbjct: 235 PVIFFPKGLGLGLAQV-NFDVADFVGIDWQYSLPEARAIVDKKVG-VQGNLDPRILSIDD 292
Query: 299 QVMIDGVNAILDVLGSGPF--IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ M+ A G + IFN GHG +P NV ++ V+S
Sbjct: 293 RTMLKKELAKFKAFGKDNYNWIFNTGHGFSPDNKVDNVKFVIDWVKS 339
>gi|291483487|dbj|BAI84562.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. natto
BEST195]
Length = 353
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 191/352 (54%), Gaps = 19/352 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R+ + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + +++ ++P
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D+ + ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y
Sbjct: 120 QDVPY-----VLETIKLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S
Sbjct: 174 MPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ ++ N I F GA ++ ++ L + +GLDW + + A VQGNLDP
Sbjct: 234 LAKE--NVPLIMFGVGASHLADDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ +V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 291 ILLAPWEVIEKKTKEILDQGMKSDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 342
>gi|313607390|gb|EFR83774.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL F2-208]
Length = 350
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWTILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+S V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSDVKAAHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW ++ A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPAKCLEEADRILQEGVLEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|46198540|ref|YP_004207.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB27]
gi|46196162|gb|AAS80580.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB27]
Length = 360
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 13/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL P++
Sbjct: 27 ILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTLLPVKALG 85
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLP-IF 124
DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P L +P +
Sbjct: 86 VDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRP---LVPEEAVPFVL 142
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++ L++ L
Sbjct: 143 ETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKL 200
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R I
Sbjct: 201 TEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPA--GVPVIH 258
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G +L++ + + +GLD PL +A L PVQGNLDP L+ V+
Sbjct: 259 FGVGTMGLLEDMKE-AGGDVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPKGVIRRE 317
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL + G IFNLGHGI P+ +NV +V+ ++
Sbjct: 318 VQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 357
>gi|16078076|ref|NP_388893.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308850|ref|ZP_03590697.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313174|ref|ZP_03594979.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318097|ref|ZP_03599391.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322372|ref|ZP_03603666.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|416890|sp|P32395|DCUP_BACSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|143043|gb|AAA22517.1| uroporphyrinogen decarboxylase [Bacillus subtilis]
gi|2226230|emb|CAA74518.1| Uroporphyrinogen III decarboxylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|2633348|emb|CAB12852.1| uroporphyrinogen III decarboxylase [Bacillus subtilis subsp.
subtilis str. 168]
Length = 353
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 193/352 (54%), Gaps = 19/352 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R+ + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + +++ ++P
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D+ Y+L ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y
Sbjct: 120 QDV--PYVL---ETIKLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S
Sbjct: 174 MPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ ++ N I F GA ++ ++ L + +GLDW + + A VQGNLDP
Sbjct: 234 LAKE--NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ +V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 291 ILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 342
>gi|156838526|ref|XP_001642967.1| hypothetical protein Kpol_1071p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113550|gb|EDO15109.1| hypothetical protein Kpol_1071p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 370
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 21/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP W+MRQAGRYLPEY + K ++F + C E E+T+QP+RRY
Sbjct: 20 MLRAARGEAVERPPCWIMRQAGRYLPEYHEA-KAGRDFFETCRDAEVAAEITIQPVRRYR 78
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ T E +LN +D+ L L
Sbjct: 79 GLLDAAIIFSDILVIPQAMGMKVELIEGKGPHFPEPLRTPEDVEKVLNYKVDV-LKELDW 137
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
F++I++ R +L + L GFCG PWT+ YM GG + + + + + LL
Sbjct: 138 AFKAITLTRMQLQGEVPLFGFCGGPWTLLVYMSEGGGSRLFRFAKQWINEYPELSHKLLQ 197
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY----- 237
++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 198 KITDVAIEFLAQQVVAGAQILQVFESWGGELSSADFDEFSLPYLKQIAEKVPKRLLELGI 257
Query: 238 -PNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEG-PVQGNLDPMR 293
N FAKG+ Y L +L S + LDWS A+++ +QGNLDP
Sbjct: 258 TENVPMTVFAKGSWYALD---KLCSSGYQTVSLDWSWDPEEAVKINNNRVTLQGNLDPGA 314
Query: 294 LVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ N+++ ++ G G +I N GHG P +D + +
Sbjct: 315 IYGTNEIITKKTEKMIKGFGGGKKNYIVNFGHGTHPFMDTEKI 357
>gi|56750472|ref|YP_171173.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 6301]
gi|81299895|ref|YP_400103.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
gi|231982|sp|P16891|DCUP_SYNE7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81676942|sp|Q5N4W6|DCUP_SYNP6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|48040|emb|CAA77766.1| putative uroporphyrinogen decarboxylase [Synechococcus elongatus
PCC 7942]
gi|56685431|dbj|BAD78653.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 6301]
gi|81168776|gb|ABB57116.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
Length = 354
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 184/345 (53%), Gaps = 16/345 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G V++ PP+W+MRQAGRY+ YR +R K+ F + TPE +E++LQP R +
Sbjct: 9 RLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQPFRAF 68
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLL 121
D ILFSDIL +G +E++GP ++ PI T E ++ L+P + ++
Sbjct: 69 KPDGVILFSDILTPLPGMGIPFDIIESKGPILEPPIRTAEQVAAVHDLDP--EEATPFIR 126
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI ++ LR+++ N ++GF GAPWT+A+Y I G K + + A+ + LL
Sbjct: 127 PILET---LRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILHELL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+D A YL QI G V+Q+FD+ AG L +++ +A R+ V+ K+P
Sbjct: 184 GKLADNIAIYLCHQIDCGAQVVQLFDSWAGQLSPIDYDTFALPYQQRVFQQVKAKHPEVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGN 298
I + G+ +L+ + + + + +DW+V L A ++ GP +QGN+DP L
Sbjct: 244 LILYISGSAGVLERMGQ-SGCDIVSVDWTVDLLDA--RRRLGPDIGLQGNIDPGVLFGSQ 300
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D + + G+ I NLGHGI P N +T ++
Sbjct: 301 DFIRDRILDTVRKAGNQRHILNLGHGILPGTPEDNARHFFETAKN 345
>gi|194014822|ref|ZP_03053439.1| uroporphyrinogen decarboxylase [Bacillus pumilus ATCC 7061]
gi|194013848|gb|EDW23413.1| uroporphyrinogen decarboxylase [Bacillus pumilus ATCC 7061]
Length = 352
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 188/339 (55%), Gaps = 22/339 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 12 LKACKGEKTDHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVEQYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP +D PI T + + L+P DL Y+L
Sbjct: 71 DAAILYKDIMTPLPAIGVDVEIKNGIGPVIDSPIRTKADIERLGELHPEEDL--PYVL-- 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L K+ N + LIGF GAP+T+ASYMI GG K++ + + Y + L++
Sbjct: 127 -DTIQLLTKEQLN-VPLIGFAGAPFTMASYMIEGGPSKNYHKTKALMYSEPETWMLLMNK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQ+ AGV QIFD+ G L ++ + + RI + ++ + N I
Sbjct: 185 LADMTITYIRAQVKAGVSAFQIFDSWVGALNAADYRTFIKPVMQRIFTELKSE--NVPMI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQV 300
+ GA +++K++ L + +GLDW + + E +KEG +QGNLDP L+ +V
Sbjct: 243 MYGVGASHLVKDWHDLP-LDVVGLDWRMSVD---EARKEGLTKTLQGNLDPTILLSPWEV 298
Query: 301 MIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLV 338
+ + ILD + S FIFNLGHG+ P V P + L
Sbjct: 299 IEERAKDILDQGMKSDHFIFNLGHGVFPDVSPDTLKKLT 337
>gi|229918183|ref|YP_002886829.1| uroporphyrinogen decarboxylase [Exiguobacterium sp. AT1b]
gi|229469612|gb|ACQ71384.1| uroporphyrinogen decarboxylase [Exiguobacterium sp. AT1b]
Length = 349
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 12/334 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ +G + P+W MRQAGRY PEYR+I KK ++ ++ + PE +T P+++
Sbjct: 9 ILKAFKGEATDYVPVWYMRQAGRYQPEYREI-KKTRSLFEITHDPELCAYVTELPVKQLG 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQ 125
DAAIL+ DI+ ++G +V GP +D P T E + L P ++Y +F
Sbjct: 68 VDAAILYKDIMTPLPSMGVDVEIKSGIGPVIDNPYRTMEDVERLKPLNPEDISY---VFD 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LR++L + LIGF GAP+T+ASYMI GG +++ + + Y +N L++ L
Sbjct: 125 TIRLLRERL--EVPLIGFSGAPFTLASYMIEGGPSRNYHRTKALMYAEPDVWNALMEKLG 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D+ Y AQ AG+ Q+FD+ G L ++ Y + RI +R + I
Sbjct: 183 DMVITYAKAQADAGIQAFQLFDSWVGTLSRKDYARYIKPTTERIFKELRSL--DIPLIMH 240
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
GA + ++ + L + +GLDW + + A + VQGNLDP L+ V+ + V
Sbjct: 241 GVGASHQIEEWHDLP-LDVVGLDWRLSVQEARDRGITKAVQGNLDPSFLLAPWPVIEEKV 299
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
ILD P ++FNLGHG+ P+VDP ++ L
Sbjct: 300 KEILDEGMKQPGYVFNLGHGVFPEVDPAVLVKLT 333
>gi|282898644|ref|ZP_06306632.1| Uroporphyrinogen decarboxylase HemE [Cylindrospermopsis raciborskii
CS-505]
gi|281196512|gb|EFA71421.1| Uroporphyrinogen decarboxylase HemE [Cylindrospermopsis raciborskii
CS-505]
Length = 350
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR +R+K+ +F + PE +E++LQP R +
Sbjct: 10 LLRAARGEKVDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEVSLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNIDLFLNYLLP 122
D ILFSDI+ +G ++ E +GP + PI TQ E++ L+P L
Sbjct: 70 PDGVILFSDIVTPLPGMGIDMDIKEGKGPIIFSPIRTQQQVDELHPLDPETALPF----- 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I Q + LR+++ + T++GF GAPWT+A+Y + G K + + A+ +S + LLD
Sbjct: 125 IRQILGALRQEVGSASTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDSNILHQLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ A Y+ QI G V+Q+FD+ AG L +++ +A ++ V+R +P
Sbjct: 185 KLAESIAVYIRYQIDCGAQVVQMFDSWAGQLSPQDYDIFALPYQKKVFELVKRTHPQTPL 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I G+ +L+ R+ S A + +DW+V ++ A L VQGNLDP L Q
Sbjct: 245 ILLVTGSAGLLE---RMATSGADILTIDWTVDMADARRRLGNNVKVQGNLDPGVLFGSKQ 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + + G+ I NLGHG+ P+ +NV +T ++
Sbjct: 302 FIRERILDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKN 345
>gi|218288839|ref|ZP_03493090.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
LAA1]
gi|218240928|gb|EED08105.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
LAA1]
Length = 359
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 180/346 (52%), Gaps = 22/346 (6%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L + ++ P+W MRQAGRY PEYRQIR+ + LD+C PE +T P+ +
Sbjct: 11 RFLRACRREPVDRVPVWFMRQAGRYDPEYRQIRETY-TLLDICREPELCARVTRMPVDKL 69
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLL 121
DAAILFSDI+V A+G EN GP M+ P+ T E ++ +P + L Y+L
Sbjct: 70 GVDAAILFSDIMVPVGAMGMAFSLQENVGPVMEHPLRTDEDVARLHAFDP--EEALPYVL 127
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I L LP + LIGF G P+T+ASYMI GG +D+ + + ++ L+
Sbjct: 128 ---ETIRHLANTLP--VPLIGFAGGPFTLASYMIEGGPSRDYLRTKTMMLARPDLWHALM 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D LS + YL AQI AG +QIFD+ G L H F + V R+++ +
Sbjct: 183 DKLSQAMSRYLRAQIQAGASAVQIFDSWVGSLSVHGFRAHVKPHVQRMLADLTDL--ATP 240
Query: 242 FISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F G +L + D+ A +G+DW PL A + + +QGNLDP+ L
Sbjct: 241 VIYFGVHTGELLAEF---ADAGATVVGVDWRTPLDRARQRVGASVALQGNLDPVSLFAPP 297
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +L + P +IFNLGHG+ P D + +V+ V +
Sbjct: 298 EALRREVETVLRLGTQSPGYIFNLGHGVKPTTDLAQLQRVVEWVHA 343
>gi|323489412|ref|ZP_08094641.1| uroporphyrinogen decarboxylase [Planococcus donghaensis MPA1U2]
gi|323396906|gb|EGA89723.1| uroporphyrinogen decarboxylase [Planococcus donghaensis MPA1U2]
Length = 348
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 183/341 (53%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN
Sbjct: 8 LRAARGEKTDHVPVWYMRQAGRSQPEYRKIKEKY-SLEEITHQPELCAYVTKLPVDQYNN 66
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V+ GP +D PI T + + +NP D+ +
Sbjct: 67 DAAILYKDIVTPLPAIGVDVKIKSGIGPVIDNPIRTMADIERLGEINPEQDVDF-----V 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ N + LIGF GAP+T+ASYMI GG K + + + + L+D
Sbjct: 122 LDTIRLLTQEQLN-VPLIGFSGAPFTLASYMIEGGPSKSYNKTKAMMVSEPAMWFALMDK 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D Y+ AQI AG IQIFD+ G L ++ + + RI + +R + N
Sbjct: 181 LADTIIPYVKAQIKAGAKAIQIFDSWVGALNVEDYRIFIKPVMDRIFAELRTE--NVPLT 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW +P+S A + +QGNLDP L+ V+ +
Sbjct: 239 IFGVGASHLAKEWHELP-VDVVGLDWRLPISEARSMGLTKTLQGNLDPSYLLADWSVIEE 297
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
ILD+ + + +IFNLGHG+ P+V+P + L V
Sbjct: 298 RTKKILDMGMQNDGYIFNLGHGVFPEVNPDTLKRLTSFVHE 338
>gi|237756709|ref|ZP_04585211.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691133|gb|EEP60239.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 348
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/350 (34%), Positives = 182/350 (52%), Gaps = 18/350 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + L + + PIWLMRQAGRY+ EYRQ+R+ +F + + V+ ++
Sbjct: 3 NPKNDLFLRACRRQKVERTPIWLMRQAGRYMKEYRQLREIAGSFKNYYKNVDLAVKASIL 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLF 116
P DA I+FSDIL +++G F E EGP + PI ++E + NP F
Sbjct: 63 PYTLLGVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKSKEDIQKLKEFNPEDVYF 122
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + I + + I +IGF GAP+T+A+YMI G KD + + F Y N
Sbjct: 123 VGEI------IKGVNQTTGREIPVIGFAGAPFTIAAYMIEGRGSKDFKKTKSFMYNNQED 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
F LLD ++D++ +YL QI +G D +QIFD+ AG L +++ + SV +II + K
Sbjct: 177 FKILLDKIADMTIKYLSFQIESGADAVQIFDSWAGHLSPKDYKEFVLPSVKKIIENL--K 234
Query: 237 YPNAKFISFAKG-AGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL 294
+ N I F KG G+M ++ ++++ +DW + + A +L + VQGNLDPM L
Sbjct: 235 HYNKPIIHFTKGVCGFM--DFILESNADVYSIDWMIDIKKAKDLIYPKASVQGNLDPMVL 292
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I+ G IFNLGHG+ P +D V LV TV+
Sbjct: 293 YADTDIIKKEAEYIIKSWGEDTGHIFNLGHGLMPDMDASKVKFLVDTVKE 342
>gi|229101770|ref|ZP_04232487.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-28]
gi|228681718|gb|EEL35878.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-28]
Length = 348
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 184/335 (54%), Gaps = 16/335 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + V AILD P +IFNLGHG+ P+V+P +
Sbjct: 297 IEEHVKAILDQGMKEPGYIFNLGHGVFPEVNPDTL 331
>gi|172046170|sp|Q72L31|DCUP_THET2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 341
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 13/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL P++
Sbjct: 8 ILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTLLPVKALG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLP-IF 124
DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P L +P +
Sbjct: 67 VDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRP---LVPEEAVPFVL 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++ L++ L
Sbjct: 124 ETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R I
Sbjct: 182 TEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPA--GVPVIH 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G +L++ + + +GLD PL +A L PVQGNLDP L+ V+
Sbjct: 240 FGVGTMGLLEDMKE-AGGDVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPKGVIRRE 298
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL + G IFNLGHGI P+ +NV +V+ ++
Sbjct: 299 VQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 338
>gi|30019223|ref|NP_830854.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 14579]
gi|206967828|ref|ZP_03228784.1| uroporphyrinogen decarboxylase [Bacillus cereus AH1134]
gi|218233350|ref|YP_002365836.1| uroporphyrinogen decarboxylase [Bacillus cereus B4264]
gi|228938305|ref|ZP_04100918.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228951531|ref|ZP_04113636.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228971183|ref|ZP_04131814.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|229078374|ref|ZP_04210937.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock4-2]
gi|229189264|ref|ZP_04316285.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10876]
gi|38257411|sp|Q81GW6|DCUP_BACCR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723866|sp|B7HGF9|DCUP_BACC4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29894766|gb|AAP08055.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 14579]
gi|206736748|gb|EDZ53895.1| uroporphyrinogen decarboxylase [Bacillus cereus AH1134]
gi|218161307|gb|ACK61299.1| uroporphyrinogen decarboxylase [Bacillus cereus B4264]
gi|228594164|gb|EEK51962.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10876]
gi|228704915|gb|EEL57338.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock4-2]
gi|228788510|gb|EEM36458.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228808096|gb|EEM54610.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228821342|gb|EEM67354.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 348
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 187/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|83314562|ref|XP_730413.1| uroporphyrinogen decarboxylase [Plasmodium yoelii yoelii str.
17XNL]
gi|23490130|gb|EAA21978.1| uroporphyrinogen decarboxylase, putative [Plasmodium yoelii yoelii]
Length = 372
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 193/344 (56%), Gaps = 25/344 (7%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N P W+MRQAGRYLPEYR+++K + NF DMCY PE + +T+ P +R+ D ++FSDI
Sbjct: 38 NEIPFWIMRQAGRYLPEYRELKKNY-NFFDMCYNPELSSNITIMPYKRFLCDMVVIFSDI 96
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQ--EIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
L+I A+G +++F+EN GP + + LN N+ +N L ++ SI++ +KK+
Sbjct: 97 LIIFIAMGIDIQFIENVGPIFNKKINNLDDFKTLNLNLKEIINNLHFVYDSINLTKKKIN 156
Query: 136 NHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
N + L+GFCG+P+T+ +Y+ K + + Y+NS + +L+ L ++ +++
Sbjct: 157 NSVPLLGFCGSPFTLFTYLTKDNTSKLSPYENSLKLIYENSEDTHHILNTLCNICISHVL 216
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM- 252
QI +G ++IQIFD++A + ++ F+ ++ + +II A+++ PN I F K +
Sbjct: 217 NQIDSGANLIQIFDSNAEIVDKNIFKKFSLNYINKIIQAIKKYRPNIYVILFIKDNFHED 276
Query: 253 LKN---------YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+KN +++L ++ G ++ L Q + +QG LDP L++ N+ +
Sbjct: 277 IKNLDIDVLSITHKQLINN---GSNYYYNL-----FQNKIILQGALDPHILLLDNKKNVQ 328
Query: 304 --GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I + +I +LGHGI P +NV ++ V+S K
Sbjct: 329 KYASEMIQQISHKNKYIASLGHGILPNSKIENVYAFIQAVKSVK 372
>gi|315283314|ref|ZP_07871530.1| uroporphyrinogen decarboxylase [Listeria marthii FSL S4-120]
gi|313613035|gb|EFR86961.1| uroporphyrinogen decarboxylase [Listeria marthii FSL S4-120]
Length = 352
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 182/331 (54%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++++ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEQYSLF-EITHQPELCAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFQPEIEV--PYVL---DTIKLLADDM- 134
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YL+AQ
Sbjct: 135 LEVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTASYLVAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYATYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW L+ A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETLTTARQKVPTKAIQGNLDPSTLLAPEKCLEEAERILQEGVLKP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
FIFNLGHG+ P+V P+ + L + RSE
Sbjct: 314 GFIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|226355380|ref|YP_002785120.1| uroporphyrinogen decarboxylase [Deinococcus deserti VCD115]
gi|226317370|gb|ACO45366.1| putative uroporphyrinogen decarboxylase [Deinococcus deserti
VCD115]
Length = 362
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 184/342 (53%), Gaps = 13/342 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L+G + P+W MRQAGRY+PEYR +R ++ LD TPE E+TLQPI+
Sbjct: 25 LKALRGEPASHTPVWFMRQAGRYMPEYRALRAG-RSMLDCIRTPELAAEITLQPIKAMPL 83
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN-PNIDLFLNYLLPIFQ 125
DAAILF+DIL +G ++ FV GP++ +P+ TT ++ L P+ + Y +
Sbjct: 84 DAAILFNDILTPLPTMGLDLDFVGGVGPQIANPVSTTADVDRLGVPSTAETMPY---TAE 140
Query: 126 SISILRKKL-PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
SI +L +L I LIGF GAP+T+ASY I G +++ + + F Y A+ L+
Sbjct: 141 SIRLLVPELNARGIPLIGFVGAPFTLASYAIEGKGSRNYERTKRFMYAEPAAWERLMGKF 200
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A+YL Q+ AG +QIFD+ G L +++ + + R+I V++ I
Sbjct: 201 EAILADYLTEQVKAGASAVQIFDSWVGALSIYDYRTFVKPATSRLIERVKKL--GVPVIY 258
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGNQVMID 303
F G ++L + L +N +G DW +PL A +L + G +QGNLDP+ L + +
Sbjct: 259 FGTGTTHLLPDMASL-GTNIVGADWRLPLDQAWDLLESGQGIQGNLDPLLLQAPWRELRH 317
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL + G +FN+GHGI P+ V L V +
Sbjct: 318 QTDRILGEAAGRPGHVFNVGHGILPETPQAMVHRLTDYVHEQ 359
>gi|229171825|ref|ZP_04299396.1| Uroporphyrinogen decarboxylase [Bacillus cereus MM3]
gi|228611645|gb|EEK68896.1| Uroporphyrinogen decarboxylase [Bacillus cereus MM3]
Length = 348
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 187/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKV--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|332705581|ref|ZP_08425657.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
gi|332355373|gb|EGJ34837.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
Length = 353
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 184/341 (53%), Gaps = 13/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E++LQP + +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDIAIEISLQPWKAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLLP 122
D ILFSDIL +G VE++GP ++ PI TQE ++LL+ + F+ +L
Sbjct: 70 PDGVILFSDILTPLPGIGIEFEIVESKGPIINQPIRTQEQIDQLHLLDLDRFGFIREIL- 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
LR+++ N ++GF GAPWT+ +Y I G K++ + A+ + L
Sbjct: 129 -----KALRQEVGNEAAVLGFVGAPWTLGAYAIEGKSSKNYSIIKGMAFSQPAMLHQFLG 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D A Y+ QI++G VIQ+FD+ AG L ++E +A R++ V+ +P+ F
Sbjct: 184 KLADAIAIYVRYQINSGAQVIQMFDSWAGELSPQDYETFALPYQQRVVQQVKATHPDTPF 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I + G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L +
Sbjct: 244 ILYISGSAGVLERMGQ-SGVDMVSVDWTVDMAEARTRLGDKMKVQGNIDPGVLFGSQAFI 302
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
D + + G+ I NLGHG+ P NV +T +
Sbjct: 303 RDRIVDTIRKAGNKGHILNLGHGVLPGTPEDNVRFFFETAK 343
>gi|284928914|ref|YP_003421436.1| uroporphyrinogen decarboxylase [cyanobacterium UCYN-A]
gi|284809373|gb|ADB95078.1| uroporphyrinogen decarboxylase [cyanobacterium UCYN-A]
Length = 354
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 185/341 (54%), Gaps = 11/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R ++ +F + P +E++LQP +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPNLAIEISLQPWHAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G + + N+GP + P T ++I L+ DL LP +
Sbjct: 70 PDGVIMFSDILTPLSGMGVSFDIIPNKGPVISPAIRTLKQIEDLH---DLEPEESLPFVK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LRK++ N T++GF GAPWT+A+Y I G K++ + A+ + LL +
Sbjct: 127 TILQSLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKNYTITKAMAFSEPEILHRLLSKI 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A Y QI G +IQ+FD+ AG L ++E++A ++I +++ YP+ I
Sbjct: 187 TNSIATYACHQIACGAQIIQLFDSWAGHLSPQDYESFALPYQQQVIHKIKKIYPDTPVIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ + L N + ++ + +DW++ ++ A + L +QGN+DP L ++V+ +
Sbjct: 247 YINSSAGKL-NQMECSKADIVSIDWTIDMAEARQRLSNHITIQGNIDPGILFGSHKVIKE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
+ + G G I NLGHG+ TP+ + + ++ K +
Sbjct: 306 RIIDTVQKAGKGRHILNLGHGVVVGTPEENVRYFFEIAKQI 346
>gi|255712319|ref|XP_002552442.1| KLTH0C04994p [Lachancea thermotolerans]
gi|238933821|emb|CAR22004.1| KLTH0C04994p [Lachancea thermotolerans]
Length = 368
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 186/343 (54%), Gaps = 21/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL G + PP W+MRQAGRYLPEY ++ K ++F + C E E+T+QP+RRY
Sbjct: 17 ILRAALGQPVERPPCWIMRQAGRYLPEYHKV-KDGRDFFETCRDAEIASEITIQPVRRYA 75
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLP 122
DAAI+FSDILVI ALG V +E +GP + I T+E +L+ + D+ L L
Sbjct: 76 GLLDAAIIFSDILVIPQALGMRVEMLEGKGPHFPELIRTEEDMKKVLDYHTDV-LKELDW 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
F++I++ R KL + L+GFCG PWT+ YM GG + + + ++ + LL
Sbjct: 135 AFRAITVTRHKLGGQVPLLGFCGGPWTLLVYMTEGGGSRLFRFAKQWLNESPELCHKLLQ 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP---- 238
++DV+ E+L Q+ AG ++Q+F++ G LG +F+ ++ + +I + +
Sbjct: 195 KITDVAVEFLAQQVVAGAQMLQVFESWGGELGPRDFDEFSLPYIRQISKRLPHRLKELGI 254
Query: 239 --NAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLDPMR 293
F+KG+ Y L +L DS NA+ LDW A+++ +QGNLDP
Sbjct: 255 EEQIPLTIFSKGSWYALD---KLCDSGYNAVSLDWLWDPKDAVKVNAGRVTLQGNLDPGV 311
Query: 294 LVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ ++V+ V ++ G G +I N GHG P +DP+ +
Sbjct: 312 IYGTDEVISKRVEEMITGFGGGKKQYIVNFGHGTHPFMDPEKI 354
>gi|313673714|ref|YP_004051825.1| uroporphyrinogen decarboxylase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940470|gb|ADR19662.1| uroporphyrinogen decarboxylase [Calditerrivibrio nitroreducens DSM
19672]
Length = 336
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 193/344 (56%), Gaps = 23/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++VL G ++ PP+WLMRQAGRY+PEY ++R+K FL++C PE ++T QP+
Sbjct: 5 LIDVLDGKKVDRPPVWLMRQAGRYMPEYMEVRRKV-TFLELCKNPELAAKVTHQPVDILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLP 122
DAAILFSDIL+ + +G + F + P + +P+ TQ+ + +L P D+
Sbjct: 64 VDAAILFSDILIPVEPMGVKLDF--DPAPVISNPVRTQKDVDRLTILEPYKDVPF----- 116
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +L K L ++ LIGF GAP+T+A YM+ GG K+ + + + + ++F+ L++
Sbjct: 117 VVETVKLLVKDL--NVPLIGFSGAPFTLACYMVEGGGSKNFIEIKRMMHNDYKSFSTLME 174
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + +YL AQI G V+QIFDT AG L E+ V ++ ++ NA
Sbjct: 175 KLTISTIKYLQAQIDNGCPVVQIFDTWAGILSPCEYAEMVLPFVNILVDNLK----NAHV 230
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDPMRLVVGNQV 300
+ FAK + K L S IG+DW + L A G +QGN+DP+ L +
Sbjct: 231 VYFAKDSATFYKYISNLKCS-CIGVDWKIELDEADMQLGTGKFVLQGNMDPVILFTNREK 289
Query: 301 MIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ I+D S IFNLGHGI P +NV LV+ +++
Sbjct: 290 IMNIAKLIVDKGKSLKGHIFNLGHGILPNTPVENVKYLVELIKN 333
>gi|29828770|ref|NP_823404.1| uroporphyrinogen decarboxylase [Streptomyces avermitilis MA-4680]
gi|38257428|sp|Q82KY4|DCUP_STRAW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29605875|dbj|BAC69939.1| putative uroporphyrinogen decarboxylase [Streptomyces avermitilis
MA-4680]
Length = 355
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 175/328 (53%), Gaps = 12/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+RR+N DAAI FSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVAEITLQPVRRHNVDAAIYFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI T+ ++ L DL + + ++I +L +L
Sbjct: 92 LKAIGIDLDIKPGVGPVVEKPIRTRADLAQLR---DLTPEDVSYVTEAIKLLTAEL-GET 147
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG K+H + Y + + + LLD L+++++ +L QI A
Sbjct: 148 PLIGFAGAPFTLASYLVEGGPSKNHEHTKALMYGDPQLWADLLDRLAEITSAFLKVQIEA 207
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 208 GASAVQLFDSWVGALAPADYRRSVMPASTKVFQAVESY--GVPRIHFGVGTGELL-GLMG 264
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGP 316
++ +G+DW VPL A G +QGNLDP L + + +LD G
Sbjct: 265 EAGADVVGVDWRVPLDEAARRVGTGKALQGNLDPAVLFSTTEAVETKTREVLDAAAGLEG 324
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P DP + LV+ V ++
Sbjct: 325 HVFNLGHGVPPTTDPDALTRLVEYVHTQ 352
>gi|89100440|ref|ZP_01173303.1| uroporphyrinogen decarboxylase [Bacillus sp. NRRL B-14911]
gi|89084869|gb|EAR64007.1| uroporphyrinogen decarboxylase [Bacillus sp. NRRL B-14911]
Length = 348
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 184/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR PEYR I++K+ F ++ + PE +T P+ Y
Sbjct: 10 LKAARGEKTDRVPVWYMRQAGRSQPEYRAIKEKYSLF-EITHQPELCAYVTRLPVENYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +P+ + +++ L+P D+ Y+L
Sbjct: 69 DAAILYKDIMTPLPAIGVDVDIKTGIGPVISNPVRSLSDVEKLGELHPEQDI--PYVLDT 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + +P LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 127 IKLLTEEQLTVP----LIGFSGAPFTIASYMIEGGPSKNYNKTKAFMYSEPQAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D Y+ AQI AG IQ+FD+ G L ++ + + RI +A++ + N I
Sbjct: 183 LADTIIVYVKAQIKAGAKAIQLFDSWVGALNVADYRCFIKPVMERIFTALKEE--NVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L + +GLDW +P+S A E+ V GNLDP L+ +V+ +
Sbjct: 241 MFGVGASHLAMEWHDLP-LDVVGLDWRLPISEAREMGIRKTVMGNLDPAILLAPWEVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
ILD P +IFNLGHG+ P V+P + L
Sbjct: 300 RAREILDQGMQQPGYIFNLGHGVFPSVNPDTLKKLT 335
>gi|88809573|ref|ZP_01125080.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7805]
gi|88786323|gb|EAR17483.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7805]
Length = 352
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R ++ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDRYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ +PI T ++ LNP +
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGEPIRTMAQVDALHPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 121 PF-----VGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPA 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A+YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHKLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +L+ T + I LDW+V ++ AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVLERM-ATTGVDIISLDWTVDMAEALARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 295 FGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGASFFRSGKS 343
>gi|256270819|gb|EEU05966.1| Hem12p [Saccharomyces cerevisiae JAY291]
Length = 362
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 182/348 (52%), Gaps = 37/348 (10%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+RRY
Sbjct: 12 ILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNN-RDFFQTCRDAEIASEITIQPVRRYR 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ E +L+ +D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDV-LKELDW 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW--- 179
F++I++ R KL + L GFCG PWT+ YM G G +R+F + A W
Sbjct: 130 AFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEG------GGSRLFRF----AKQWINM 179
Query: 180 -------LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I
Sbjct: 180 YPELSHKLLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAER 239
Query: 233 VRRKYPNAKFIS------FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PV 285
V ++ I FAKG+ Y L + + + LDWS A+++ K +
Sbjct: 240 VPKRLQELGIIEQIPMIVFAKGSWYALDKL-CCSGFDVVSLDWSWDPREAVKINKNRVTL 298
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDP 331
QGNLDP + +V+ V +++ G G +I N GHG P +DP
Sbjct: 299 QGNLDPGVMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDP 346
>gi|55980570|ref|YP_143867.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB8]
gi|81678593|sp|Q5SKP2|DCUP_THET8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|55771983|dbj|BAD70424.1| uroporphyrinogen decarboxylase (HemE) [Thermus thermophilus HB8]
Length = 341
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 185/340 (54%), Gaps = 13/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL P++
Sbjct: 8 ILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTLLPVKALG 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLP-IF 124
DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P L +P +
Sbjct: 67 VDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRP---LVPEEAVPFVL 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++ L++ L
Sbjct: 124 ETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWHRLMEKL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R I
Sbjct: 182 TEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPV--GVPVIH 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G +L++ + + +GLD PL +A L PVQGNLDP L+ V+
Sbjct: 240 FGVGTMGLLEDMKE-AGGDVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPKGVIRRE 298
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL + G IFNLGHGI P+ +NV +V+ ++
Sbjct: 299 VQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 338
>gi|218247770|ref|YP_002373141.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8801]
gi|218168248|gb|ACK66985.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8801]
Length = 354
Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 184/342 (53%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R K+ +F D + +E++LQP + +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSENADLAIEISLQPWKAFR 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLLP 122
D I+FSDIL +G + E++GP +D PI TQE ++ L+P LP
Sbjct: 70 PDGVIMFSDILTPLPGIGISFEIPESKGPMIDSPIRTQEQVDNLHSLDPEAS------LP 123
Query: 123 IFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I LR ++ N T++GF G+PWT+A+Y I G KD+ + A+ + L
Sbjct: 124 FIKTILKALRDEVKNEATVLGFVGSPWTLAAYAIEGKSSKDYANIKRMAFSEPAILHQFL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+D A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+
Sbjct: 184 SKLADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYKVFALPYQQQVVRQVKATHPDTP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + + + +DW+V ++ A + L + VQGN+DP L QV
Sbjct: 244 LILYISGSAGVLELMGQ-SGVDIVSVDWTVDMADARQRLGRNMMVQGNIDPGILFGSKQV 302
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D + + G G I NLGHG+ +NV +T +
Sbjct: 303 IRDRILDTVQKAGKGGHILNLGHGVLVGTPEENVGYFFETAK 344
>gi|269838339|ref|YP_003320567.1| uroporphyrinogen decarboxylase [Sphaerobacter thermophilus DSM
20745]
gi|269787602|gb|ACZ39745.1| uroporphyrinogen decarboxylase [Sphaerobacter thermophilus DSM
20745]
Length = 348
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 180/342 (52%), Gaps = 16/342 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L + ++ P+W MRQAGRY+ EYR IR + L++C P+ E+TLQPI R
Sbjct: 10 RFLRACRREPVDRTPVWFMRQAGRYMAEYRAIRAR-HTLLEICAQPDLAAEVTLQPIDRL 68
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI----TTQEIYLLNPNIDLFLNYLL 121
DAAILF+DIL+ +G ++ F EGP + +P+ + + +P
Sbjct: 69 GVDAAILFADILLPLVPMGIDLEFAAGEGPVIHNPVREAADVARLVVRDPE-----EATP 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +++ ++R++L + LIGF G P+TVASY+I GG + + + + Y+ ++ L+
Sbjct: 124 AVLEAVRLIRRELDGRVPLIGFAGGPFTVASYLIEGGSSRHYRRTKEMMYRAPDVWDALM 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+D++A YL QI AG +Q+FD+ G L ++E V RI++ V
Sbjct: 184 EKLADMTARYLAGQIRAGAQAVQLFDSWVGALSPLDYERRVLPYVQRIVAHV--APLGVP 241
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G +L + T ++ +G+DW + L + + VQGNLDP+ L +
Sbjct: 242 VIVFGTGTAGLL-SLMATTGADVVGIDWRIALDDGWARVGHDRAVQGNLDPLVLFAPREE 300
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL G P IFNLGHGI P+ NV +V+ V
Sbjct: 301 IERHVRDILARAGGRPGHIFNLGHGILPETPVDNVRYVVELV 342
>gi|229166008|ref|ZP_04293772.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH621]
gi|228617419|gb|EEK74480.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH621]
Length = 348
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|303228663|ref|ZP_07315488.1| uroporphyrinogen decarboxylase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516643|gb|EFL58560.1| uroporphyrinogen decarboxylase [Veillonella atypica
ACS-134-V-Col7a]
Length = 348
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 176/332 (53%), Gaps = 15/332 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+++QG P+W MRQAGR YR+I++K+ F ++ PE ++T P++ Y
Sbjct: 6 LDMIQGKNPGITPVWYMRQAGRSQAAYRKIKEKYTLF-EITKQPELCAQVTELPVKEYGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G NV GP D PI E +Y + +++
Sbjct: 65 DAAILYKDIMSPMVAIGVNVDIKPGVGPVFDTPIRRMEDIERLYAFDATKVEYIS----- 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ + + LIGFCGAP+T+ASY+I GG K + + R +N L++
Sbjct: 120 -KTIELLTTEVLD-VPLIGFCGAPFTIASYLIEGGPTKSYNKTRGMLISKPEIWNRLMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S EYL Q AG + +QIFD+ G + E+E + RIIS V+ ++PN
Sbjct: 178 LADMSIEYLSMQARAGANALQIFDSWVGAVNSTEYEQAIFPHMKRIISTVKSRFPNLPLA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + +L + I LDW L A + VQGNLDP L + +
Sbjct: 238 MNGVGTDHLISTWAKLP-LDVIALDWRSSLGAAKDRGVTQTVQGNLDPAYLYGDTKTIAK 296
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNV 334
V+ IL D + G +FNLGHG+ P+ DP +
Sbjct: 297 VVDEILMDGVRHGKHVFNLGHGVFPEADPAKL 328
>gi|330466517|ref|YP_004404260.1| uroporphyrinogen decarboxylase [Verrucosispora maris AB-18-032]
gi|328809488|gb|AEB43660.1| uroporphyrinogen decarboxylase [Verrucosispora maris AB-18-032]
Length = 365
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 176/325 (54%), Gaps = 12/325 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+RR+ DAAILFSDI+V
Sbjct: 38 PVWFMRQAGRSLPEYREIRANVA-MLESCRRPDLVTEITLQPVRRHKVDAAILFSDIVVP 96
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V GP + +P+ T ++ + P + Y + +++ +L K+L
Sbjct: 97 VAAAGVDLDIVPGTGPVVAEPVRTAADVQRIRPIGRDDVPY---VDEAVRMLVKEL-GDT 152
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + ++ L L++V+ +L QI A
Sbjct: 153 PLIGFAGAPFTLASYLVEGGPSRNHVKTKALMYGDPELWHALAGRLAEVTLAFLRVQIAA 212
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L E ++ + ++S + I F G +L
Sbjct: 213 GVSAVQLFDSWAGALSEADYRRFVLPHSTTVLSGLADA--GIPRIHFGVGTAELLGAMGE 270
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
++ +G+DW PL A + + VQGNLDP L V+ V ILD + P
Sbjct: 271 -AGADVVGVDWRTPLDVATCRIGPDKAVQGNLDPCLLFAPWPVIEAEVRRILDQGRAAPG 329
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P+ DP+ + +V V
Sbjct: 330 HVFNLGHGVLPETDPEVLTRVVALV 354
>gi|255725572|ref|XP_002547715.1| uroporphyrinogen decarboxylase [Candida tropicalis MYA-3404]
gi|240135606|gb|EER35160.1| uroporphyrinogen decarboxylase [Candida tropicalis MYA-3404]
Length = 361
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 183/347 (52%), Gaps = 31/347 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY +++ ++F C E +T+QP+ ++
Sbjct: 12 ILRAAKGEKVERPPIWIMRQAGRYLPEYHEVKGD-RDFFQCCQDAEIASAITIQPVDHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFLNYLL 121
DAAI+FSDILVI A+G +++ V+ +GP DP+ E LNP++ L +
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFDIKMVDGKGPVFSDPLRKPEDLDRIDLNPDVKTKLAW-- 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + LL
Sbjct: 129 -AYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA--------- 232
SD E+L Q+ AG ++QIF++ AG LG EF +A + R ISA
Sbjct: 188 QATSDACVEFLAQQVVAGAQMVQIFESWAGELGPDEFNEFALPYL-RQISAKLPPRLKEL 246
Query: 233 -VRRKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQG 287
+ K P FAKGA Y L + L DS + + LDW A+++ + +QG
Sbjct: 247 GIEEKIP---MTVFAKGAWYALDD---LCDSGYDCVSLDWLYKPEDAVKVVNGRRITLQG 300
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
NLDP + ++ + V +L G +I N GHG P +DPK +
Sbjct: 301 NLDPGVMYGSDEAIAKKVEKMLKGFGKQNYIINFGHGTHPFMDPKKI 347
>gi|227505113|ref|ZP_03935162.1| uroporphyrinogen decarboxylase [Corynebacterium striatum ATCC 6940]
gi|227198316|gb|EEI78364.1| uroporphyrinogen decarboxylase [Corynebacterium striatum ATCC 6940]
Length = 321
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 16/328 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR++R+ + LD C+ PE E+TLQP+RR++ D AILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRKVREGI-DMLDSCFMPELLAEITLQPVRRHDVDGAILFSDIVVPLKAA 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V GP MD PI T++ N+ + + + + I I+ +L LIGF
Sbjct: 60 GVGVNIVPGRGPVMDAPIRTRQDV---ENLPILDQDVPEVREGIRIILDELNPQQALIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG K+H + + + ++ L+ L+ +L Q+ AG+D +
Sbjct: 117 VGAPFTLASYLVEGGPSKNHEKTKALMHAEPETWHVLMKRLTPTIISFLELQMEAGIDAM 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ AG L E ++ + RI++A + P I F G G +L S
Sbjct: 177 QLFDSWAGYLNERDYREFVLPYSTRILAAAEGRVPR---IHFGVGTGELLGAMSE-AGSE 232
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-------P 316
+G+D+ V + A + +QGNLDP L G+ + V I D + +
Sbjct: 233 VMGVDYRVSMDAAAKRVSARTLQGNLDPALLFAGDDAIRGAVRTIKDEVAAAQAAGDIDT 292
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+N GHG+ P D V V + E
Sbjct: 293 HIWNSGHGVLPTTDADAVTRAVAIIHEE 320
>gi|172056737|ref|YP_001813197.1| uroporphyrinogen decarboxylase [Exiguobacterium sibiricum 255-15]
gi|171989258|gb|ACB60180.1| uroporphyrinogen decarboxylase [Exiguobacterium sibiricum 255-15]
Length = 348
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 181/327 (55%), Gaps = 12/327 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L ++G ++ P+W MRQAGRY EYR+I KK + ++ + PE +T P+++
Sbjct: 10 LRAIRGEEVSHVPVWYMRQAGRYQAEYREI-KKTRTLFEITHDPELCAYVTELPVKQLGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQS 126
DAAIL+ DI+ ++G +V GP + +PI T + + F +P IF++
Sbjct: 69 DAAILYKDIMTPLPSMGVDVEIKSGIGPVIANPIRTMDDV---QALQTFKKEDIPYIFET 125
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +LR++L + LIGF GAP+T+ASYMI GG K + + + Y + ++ L++ L D
Sbjct: 126 IKLLRERL--EVPLIGFSGAPFTLASYMIEGGPSKGYHKTKALMYGHPDVWHALMEKLGD 183
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +Y+ AQ+ AG+ QIFD+ G +++ Y ++ RI + ++ I F
Sbjct: 184 MVIDYIKAQVDAGIQAFQIFDSWVGTTSRNDYVLYIKPTMERIFTELKET--GVPMIMFG 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GA ++ + + L + +GLDW + + A E +QGNLDP L+ +++
Sbjct: 242 VGASHLAEEWHDLP-LDVVGLDWRLSVDAARERGLTKTLQGNLDPSYLLAPWEILEAKTK 300
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPK 332
ILD+ P FIFNLGHGI P+VDP+
Sbjct: 301 EILDMGMKRPGFIFNLGHGIFPEVDPE 327
>gi|220909768|ref|YP_002485079.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7425]
gi|219866379|gb|ACL46718.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7425]
Length = 349
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 179/340 (52%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR +R K+ +F D + VE++LQP R +
Sbjct: 11 LLRAARGERLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSEKTDLAVEISLQPFRAFE 70
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL +G +E+ GP +DP T ++I L P L LP +
Sbjct: 71 PDGVILFSDILTPLPGMGIPFDIIESRGPIIDPPIRTLEQIKQLRP---LEPEESLPFIR 127
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
I + LR+++ + T++GF GAPWT+A+Y I G KD+ + A+ + L +
Sbjct: 128 EILTTLRQEVGDRATVLGFVGAPWTLAAYAIEGKSSKDYTIIKSLAFAQPEILHQFLAHI 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI +G V+QIFD+ AG L +++ +A R+I V+ +P I
Sbjct: 188 ADSIATYVRYQIDSGAQVVQIFDSWAGQLSPIDYDTFALPYQQRVIQQVKATHPETPLIL 247
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW V ++ A + G VQGN+DP+ L + D
Sbjct: 248 YISGSAGVLERMGK-SGVDLVSVDWMVDMAEARQRLGSGVGVQGNMDPVALFGPQPFIRD 306
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + G I NLGHG+ +NV +TV+S
Sbjct: 307 RIYDTIRKAGQQGHIMNLGHGVLQNTPEENVAFFFETVKS 346
>gi|158316931|ref|YP_001509439.1| uroporphyrinogen decarboxylase [Frankia sp. EAN1pec]
gi|158112336|gb|ABW14533.1| uroporphyrinogen decarboxylase [Frankia sp. EAN1pec]
Length = 360
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 182/339 (53%), Gaps = 19/339 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L G+ + P+W MRQAGR LPEYR +R LD C + E+TLQP+RR+
Sbjct: 29 LRAAAGDRPDSVPVWFMRQAGRVLPEYRALRAT-TAMLDSCRNADMVTEITLQPVRRFRP 87
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI FSDI++ A+G +V V GP + P+ ++ +L P + Y + ++
Sbjct: 88 DAAIFFSDIVLPLAAVGVDVDIVAGVGPVVAHPVRAPSDLDVLRPLEPGDVPY---VSEA 144
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ L ++L LIGF GAP+T+ASY+I GG ++H + + Y ++ LL L+D
Sbjct: 145 VASLVREL-GQTPLIGFAGAPFTLASYLIEGGPSRNHTRTKALMYAEPALWHDLLGRLAD 203
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++A +L Q+ AG D IQ+FD+ AG L E ++ Y A R+++A I F
Sbjct: 204 ITAAFLRVQVDAGADAIQLFDSWAGALSEDDYLRYVAPHSTRVLAAFADD--GIPRIHFG 261
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMID 303
G +L ++ +G+DW VPL A ++ GP VQGNLDP + + V+
Sbjct: 262 VNTGELLGAMG-AAGADVVGVDWRVPLDEAA--RRVGPGRAVQGNLDPAAVFAPSDVLAA 318
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDP---KNVLDLV 338
V + + P IFN GHG+ P+ DP +++DLV
Sbjct: 319 KVRDVCRRGAAAPGHIFNFGHGVLPESDPGVLAHIVDLV 357
>gi|151942038|gb|EDN60394.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae YJM789]
Length = 362
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 182/348 (52%), Gaps = 37/348 (10%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+RRY
Sbjct: 12 ILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNN-RDFFQTCRDAEIASEITIQPVRRYR 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ E +L+ +D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDV-LKELDW 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW--- 179
F++I++ R KL + L GFCG PWT+ YM G G +R+F + A W
Sbjct: 130 AFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEG------GGSRLFRF----AKQWINM 179
Query: 180 -------LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I
Sbjct: 180 YPELSHKLLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAER 239
Query: 233 VRRK------YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PV 285
V ++ I FAKG+ Y L + + + LDWS A+++ K +
Sbjct: 240 VPKRLQELGIMEQIPMIVFAKGSWYALDKL-CCSGFDVVSLDWSWDPREAVKINKNRVTL 298
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDP 331
QGNLDP + +V+ V +++ G G +I N GHG P +DP
Sbjct: 299 QGNLDPGVMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDP 346
>gi|297203087|ref|ZP_06920484.1| uroporphyrinogen decarboxylase [Streptomyces sviceus ATCC 29083]
gi|197712085|gb|EDY56119.1| uroporphyrinogen decarboxylase [Streptomyces sviceus ATCC 29083]
Length = 351
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 179/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+RR+N DAAI +SDI+V
Sbjct: 29 PVWFMRQAGRSLPEYRKVREGIP-MLESCARPELVAEITLQPVRRHNVDAAIYYSDIVVP 87
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI T+ ++ L DL + + ++I +L ++L
Sbjct: 88 LKAIGIDLDIKPGVGPVVEHPIRTRADLAQLR---DLTPEDVSYVTEAIGLLTREL-GPT 143
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + + + Y + + LLD L++++A +L QI A
Sbjct: 144 PLIGFAGAPFTLASYLVEGGPSRTYENAKSMMYGDPELWADLLDRLAEITAAFLKVQIEA 203
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ AG L ++ + ++ AV I F G G +L+
Sbjct: 204 GASAVQLFDSWAGALAPADYRRSVLPASAKVFKAVEGY--GVPRIHFGVGTGELLQLMGE 261
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L + + +LD G
Sbjct: 262 -AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPTVLFASTEAVEAKTREVLDSAEGL 318
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHG+ P DP + LV+ V +
Sbjct: 319 EGHVFNLGHGVMPSTDPDALTRLVEYVHT 347
>gi|303230314|ref|ZP_07317079.1| uroporphyrinogen decarboxylase [Veillonella atypica ACS-049-V-Sch6]
gi|302515025|gb|EFL57002.1| uroporphyrinogen decarboxylase [Veillonella atypica ACS-049-V-Sch6]
Length = 348
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 176/332 (53%), Gaps = 15/332 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+++QG P+W MRQAGR YR+I++K+ F ++ PE ++T P++ Y
Sbjct: 6 LDMIQGKNPGITPVWYMRQAGRSQAAYRKIKEKYTLF-EITKQPELCAQVTELPVKEYGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G NV GP D PI E +Y + +++
Sbjct: 65 DAAILYKDIMSPMVAIGVNVDIKPGVGPVFDTPIRRMEDIERLYAFDATKVEYIS----- 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ + + LIGFCGAP+T+ASY+I GG K + + R +N L++
Sbjct: 120 -KTIELLTTEVLD-VPLIGFCGAPFTIASYLIEGGPTKSYNKTRGMLISEPEIWNRLMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S EYL Q AG + +QIFD+ G + E+E + RIIS V+ ++PN
Sbjct: 178 LADMSIEYLSMQARAGANALQIFDSWVGAVNSTEYEQAIFPHMKRIISTVKSRFPNLPLA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + +L + I LDW L A + VQGNLDP L + +
Sbjct: 238 MNGVGTDHLISTWAKLP-LDVIALDWRSSLGAAKDRGVTQTVQGNLDPAYLYGDTKTIAK 296
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNV 334
V+ IL D + G +FNLGHG+ P+ DP +
Sbjct: 297 VVDEILMDGVRHGKHVFNLGHGVFPEADPAKL 328
>gi|242058073|ref|XP_002458182.1| hypothetical protein SORBIDRAFT_03g028330 [Sorghum bicolor]
gi|241930157|gb|EES03302.1| hypothetical protein SORBIDRAFT_03g028330 [Sorghum bicolor]
Length = 404
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 180/332 (54%), Gaps = 8/332 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R + D ILFSDIL
Sbjct: 63 PPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFAPDGVILFSDILT 122
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++GP + P+ ++E IDL + L + +S+ ILR ++
Sbjct: 123 PLPAIGVPFDISDSKGPVIQSPVRSEEQVRELVPIDL--DMLQFVGESLKILRNEIDGKA 180
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L+ ++Y+I Q+++
Sbjct: 181 ALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPDVLRSLLSHLAQAISDYIIYQVNS 240
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQIFD+ G L H +E ++ + +I+S ++++ P+ + + G G +L+ +
Sbjct: 241 GAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPHVPLVLYINGNGGLLERMKD 300
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
T + IGLDW+V +S G VQGN+DP L V+ D ++ ++ G
Sbjct: 301 -TGVDVIGLDWTVDMSDGRRRLGNGISVQGNVDPAFLFSPLPVLTDEIHRVVKSAGPKGH 359
Query: 318 IFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 360 ILNLGHGVLQKTPEEAVAHFFDVTRSLRYDTL 391
>gi|325193804|emb|CCA28013.1| uroporphyrinogen decarboxylase putative [Albugo laibachii Nc14]
Length = 332
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 176/328 (53%), Gaps = 17/328 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR+LPE+R +RK +F MC PE VE++LQP RRY DA I+FSDILVI A+
Sbjct: 1 MRQAGRHLPEFRSLRKAGYDFFMMCTVPELAVEVSLQPFRRYGVDAVIIFSDILVIPMAM 60
Query: 85 GRNVRFVENEGPRMD-PI---TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
G + V + GP PI E L P+I+ L Y+L +I++ R+++ + L
Sbjct: 61 GMQISMVPSVGPVFSKPIRDLKDVETLNLTPDIEESLGYVL---DAINLARQEIDGQVPL 117
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCG P T+ YMI G + + F Y++ + LL L+D+ +L+AQ AG
Sbjct: 118 IGFCGGPLTLLCYMIEGRGSRTKSIFKTFLYEHPAKVHTLLYALTDICIRFLVAQQRAGA 177
Query: 201 DVIQIFDTHAG--CLGEHEFE---NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
V+Q+F++ A +H FE Y + R+ A P + F+KG Y +
Sbjct: 178 QVLQVFESVAAESVTQKHYFEFAFPYLEQIAARVKDACGETVP---IVCFSKGTPYAYEA 234
Query: 256 YRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
T +++ +DW + ++ + +QGN+DP + +++ V A+L+ G+
Sbjct: 235 LAT-TKYDSLQVDWQSDVYQVRDIVDGKLSLQGNMDPCAIYASPEIIKSNVRAMLESFGT 293
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ NLGHG P ++P +V VK+V+
Sbjct: 294 QNYVANLGHGCFPDMEPSHVDTFVKSVQ 321
>gi|113953768|ref|YP_731091.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9311]
gi|122945623|sp|Q0I8Y1|DCUP_SYNS3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|113881119|gb|ABI46077.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9311]
Length = 351
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 187/348 (53%), Gaps = 11/348 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +L +G + PP+W+MRQAGRY+ YR +R + +F + P+ + E+++
Sbjct: 1 MSETLPLLLRAARGETVERPPVWMMRQAGRYMKVYRDLRDRHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLN 118
QP + + D ILFSDIL +G VE++GP++ DPI + ++ L P L
Sbjct: 61 QPFKAFQPDGVILFSDILTPLPGMGIEFDIVESKGPQIGDPIRSLSQVEALRP---LQPE 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + + + LR + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 118 ESMPFVGEVLGRLRSSVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKKMAFQEPELL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD + A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +
Sbjct: 178 HKLLDHFATSIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ FI + G+ +L+ R T + I LDW+V ++ L L VQGN+DP L
Sbjct: 238 PDTPFILYISGSAGVLERMGR-TGVDIISLDWTVDMAEGLARLPDHIGVQGNVDPGLLFG 296
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
+ + D ++ + I NLGHGI TP+ + + + KTV
Sbjct: 297 TPEAIRDRIDDCVRKARGRRHILNLGHGILPGTPEENGRAFFEAGKTV 344
>gi|6320252|ref|NP_010332.1| Hem12p [Saccharomyces cerevisiae S288c]
gi|416894|sp|P32347|DCUP_YEAST RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3767|emb|CAA45253.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae]
gi|4776|emb|CAA79514.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae]
gi|798900|emb|CAA89078.1| Hem12p [Saccharomyces cerevisiae]
gi|190404982|gb|EDV08249.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae RM11-1a]
gi|207346807|gb|EDZ73194.1| YDR047Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259145291|emb|CAY78555.1| Hem12p [Saccharomyces cerevisiae EC1118]
gi|285811071|tpg|DAA11895.1| TPA: Hem12p [Saccharomyces cerevisiae S288c]
gi|323349330|gb|EGA83555.1| Hem12p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355740|gb|EGA87555.1| Hem12p [Saccharomyces cerevisiae VL3]
Length = 362
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 182/348 (52%), Gaps = 37/348 (10%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+RRY
Sbjct: 12 ILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNN-RDFFQTCRDAEIASEITIQPVRRYR 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ E +L+ +D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDV-LKELDW 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW--- 179
F++I++ R KL + L GFCG PWT+ YM G G +R+F + A W
Sbjct: 130 AFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEG------GGSRLFRF----AKQWINM 179
Query: 180 -------LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I
Sbjct: 180 YPELSHKLLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAER 239
Query: 233 VRRK------YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PV 285
V ++ I FAKG+ Y L + + + LDWS A+++ K +
Sbjct: 240 VPKRLQELGIMEQIPMIVFAKGSWYALDKL-CCSGFDVVSLDWSWDPREAVKINKNRVTL 298
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDP 331
QGNLDP + +V+ V +++ G G +I N GHG P +DP
Sbjct: 299 QGNLDPGVMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDP 346
>gi|157691740|ref|YP_001486202.1| uroporphyrinogen decarboxylase [Bacillus pumilus SAFR-032]
gi|172045998|sp|A8FBM5|DCUP_BACP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157680498|gb|ABV61642.1| uroporphyrinogen decarboxylase [Bacillus pumilus SAFR-032]
Length = 352
Score = 185 bits (469), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 187/339 (55%), Gaps = 22/339 (6%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 12 LKACKGEKTDHVPAWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVEQYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP +D PI T + + L+P DL Y+L
Sbjct: 71 DAAILYKDIMTPLPAIGVDVEIKNGIGPVIDSPIRTKADIERLGELHPEEDL--PYVL-- 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L K+ N + LIGF GAP+T+ASYMI GG K++ + + Y + L++
Sbjct: 127 -DTIQLLTKEQLN-VPLIGFAGAPFTMASYMIEGGPSKNYHKTKALMYSEPETWMLLMNK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQ+ AGV QIFD+ G L ++ + + RI + ++ + N I
Sbjct: 185 LADMTITYIRAQVKAGVSAFQIFDSWVGALNAADYRTFIKPVMQRIFTELKSE--NVPMI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQV 300
+ GA +++K++ L + +GLDW + + E +KEG +QGNLDP L+ +V
Sbjct: 243 MYGVGASHLVKDWHDLP-LDVVGLDWRMSVD---EARKEGLTKTLQGNLDPTILLSPWEV 298
Query: 301 MIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLV 338
+ + ILD + S FIFNLGHG+ P V P + L
Sbjct: 299 IEERAKDILDQGMKSDHFIFNLGHGVFPDVSPDTLKKLT 337
>gi|302522531|ref|ZP_07274873.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB78]
gi|302431426|gb|EFL03242.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB78]
Length = 355
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 173/327 (52%), Gaps = 16/327 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY + R+ L+ C PE E+T+QP+RR+ DAA+ FSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITMQPVRRHKVDAAVYFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + DP+ ++ L P ++Y + ++I +L +L
Sbjct: 92 LKAIGIDLDIKPGIGPVVADPVRGAADLARLRPLEPEDVSY---VTEAIGLLTAEL-GAT 147
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + LLD L+D++ +L QI A
Sbjct: 148 PLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWARLLDRLADITTGFLKVQIEA 207
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ Y + ++ +AV I F G G +L +
Sbjct: 208 GASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--GVPRIHFGVGTGELLHDLGE 265
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGS- 314
++ +G+DW VPL A ++ GP +QGNLDP L + + +LD
Sbjct: 266 -AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFADEAAIREKTTEVLDAARDL 322
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P DP + DLV V
Sbjct: 323 EGHIFNLGHGVLPTTDPGVLTDLVADV 349
>gi|52784864|ref|YP_090693.1| uroporphyrinogen decarboxylase [Bacillus licheniformis ATCC 14580]
gi|319646713|ref|ZP_08000942.1| uroporphyrinogen decarboxylase [Bacillus sp. BT1B_CT2]
gi|52347366|gb|AAU40000.1| HemE [Bacillus licheniformis ATCC 14580]
gi|317391301|gb|EFV72099.1| uroporphyrinogen decarboxylase [Bacillus sp. BT1B_CT2]
Length = 354
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y+
Sbjct: 13 LKACRGEKAAHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVEQYDV 71
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP +D PIT+ +++ L+P ++ +
Sbjct: 72 DAAILYKDIMTPLPGIGVDVEIKNGIGPVIDQPITSLADVEKLGELDPQ-----EHIPYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ N + LIGF GAP+T+ASYMI GG K++ + + F Y A++ L+
Sbjct: 127 LETIRLLTEEQLN-VPLIGFTGAPFTLASYMIEGGPSKNYNKTKAFMYSQPAAWDLLMKK 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A Y+ AQI AG IQ+FD+ G L ++ Y ++ + ++++ + I
Sbjct: 186 LGKMAAVYVKAQIRAGAKAIQVFDSWVGALNAGDYCRYIKPTMDVLFKELKKE--DVPLI 243
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L D + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 244 MFGVGASHLATEWHDL-DLDVVGLDWRMSVQEARDKGLTKTLQGNLDPSILLAPWEVIEE 302
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + + FIFNLGHGI P+V P + L V
Sbjct: 303 RTKAILDQGMQTDRFIFNLGHGIFPEVSPDTLKKLTAFVHE 343
>gi|52079499|ref|YP_078290.1| uroporphyrinogen decarboxylase [Bacillus licheniformis ATCC 14580]
gi|52002710|gb|AAU22652.1| uroporphyrinogen III decarboxylase [Bacillus licheniformis ATCC
14580]
Length = 353
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 187/341 (54%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y+
Sbjct: 12 LKACRGEKAAHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVEQYDV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP +D PIT+ +++ L+P ++ +
Sbjct: 71 DAAILYKDIMTPLPGIGVDVEIKNGIGPVIDQPITSLADVEKLGELDPQ-----EHIPYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ N + LIGF GAP+T+ASYMI GG K++ + + F Y A++ L+
Sbjct: 126 LETIRLLTEEQLN-VPLIGFTGAPFTLASYMIEGGPSKNYNKTKAFMYSQPAAWDLLMKK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A Y+ AQI AG IQ+FD+ G L ++ Y ++ + ++++ + I
Sbjct: 185 LGKMAAVYVKAQIRAGAKAIQVFDSWVGALNAGDYCRYIKPTMDVLFKELKKE--DVPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L D + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 243 MFGVGASHLATEWHDL-DLDVVGLDWRMSVQEARDKGLTKTLQGNLDPSILLAPWEVIEE 301
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + + FIFNLGHGI P+V P + L V
Sbjct: 302 RTKAILDQGMQTDRFIFNLGHGIFPEVSPDTLKKLTAFVHE 342
>gi|228984254|ref|ZP_04144436.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775541|gb|EEM23925.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 348
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|241952404|ref|XP_002418924.1| uroporphyrinogen decarboxylase, putative [Candida dubliniensis
CD36]
gi|223642263|emb|CAX44232.1| uroporphyrinogen decarboxylase, putative [Candida dubliniensis
CD36]
Length = 361
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 183/343 (53%), Gaps = 23/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY +++ K ++F + C E +T+QP+ ++
Sbjct: 12 ILRAAKGEKVERPPIWIMRQAGRYLPEYHEVKGK-RDFFETCQDAEIASAITIQPVDHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNYLL 121
DAAI+FSDILVI A+G + +E +GP P+ T E L P++ L +
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFEINMIEGKGPVFAAPLRTPEDLSRIDLKPDVKTKLAW-- 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ +A + LL
Sbjct: 129 -AYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPQAAHKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY---- 237
D E+L QI AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 188 QATCDACIEFLAQQIVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKELG 247
Query: 238 --PNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLDP 291
+ FAKGA Y L + L DS + + LDW A+E+ + +QGNLDP
Sbjct: 248 IEEHIPMTVFAKGAWYALDS---LCDSGYDCVSLDWLYKPEDAVEVVNGRRITLQGNLDP 304
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++V+ V +L+ G +I N GHG P +DPK +
Sbjct: 305 GVMYGSDEVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKI 347
>gi|228906808|ref|ZP_04070677.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 200]
gi|228852812|gb|EEM97597.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 200]
Length = 348
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|118476672|ref|YP_893823.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis str. Al
Hakam]
gi|225863029|ref|YP_002748407.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB102]
gi|118415897|gb|ABK84316.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis str. Al
Hakam]
gi|225787488|gb|ACO27705.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB102]
Length = 356
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 15 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 74 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 131 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 188 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 246 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 304
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P +IFNLGHG+ P+V+P + L
Sbjct: 305 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLT 343
>gi|42780242|ref|NP_977489.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10987]
gi|49480147|ref|YP_035323.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52144241|ref|YP_082587.1| uroporphyrinogen decarboxylase [Bacillus cereus E33L]
gi|196036435|ref|ZP_03103831.1| uroporphyrinogen decarboxylase [Bacillus cereus W]
gi|217958652|ref|YP_002337200.1| uroporphyrinogen decarboxylase [Bacillus cereus AH187]
gi|228944796|ref|ZP_04107159.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|81689078|sp|Q63ES5|DCUP_BACCZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81696923|sp|Q6HM98|DCUP_BACHK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81699945|sp|Q73C99|DCUP_BACC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171473047|sp|A0RAS3|DCUP_BACAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723867|sp|B7HZJ8|DCUP_BACC7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|42736161|gb|AAS40097.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10987]
gi|49331703|gb|AAT62349.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51977710|gb|AAU19260.1| uroporphyrinogen decarboxylase [Bacillus cereus E33L]
gi|195990909|gb|EDX54881.1| uroporphyrinogen decarboxylase [Bacillus cereus W]
gi|217064787|gb|ACJ79037.1| uroporphyrinogen decarboxylase [Bacillus cereus AH187]
gi|228814824|gb|EEM61082.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|324325196|gb|ADY20456.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 348
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|172037879|ref|YP_001804380.1| uroporphyrinogen decarboxylase [Cyanothece sp. ATCC 51142]
gi|226696373|sp|B1WVY1|DCUP_CYAA5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171699333|gb|ACB52314.1| uroporphyrinogen decarboxylase [Cyanothece sp. ATCC 51142]
Length = 354
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 192/344 (55%), Gaps = 17/344 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E++LQP R +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G VE++GP +DP T +++ L P + + L ++ I
Sbjct: 70 PDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEESLPFIKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
QS LR+++ N T++GF G+PWT+A+Y I G K++ + A+ + L +
Sbjct: 130 QS---LRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPEILHSFLSKI 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+ +P+ I
Sbjct: 187 ADAIAIYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW+V ++ A + L ++ VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGQ-SGVDIVSVDWTVDMAEARQRLGRDMKVQGNIDP-GVLFGSQDFIK 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
ILD + G G I NLGHG+ TP+ + + + K V
Sbjct: 305 A--RILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAKQV 346
>gi|163938985|ref|YP_001643869.1| uroporphyrinogen decarboxylase [Bacillus weihenstephanensis KBAB4]
gi|229889829|sp|A9VI98|DCUP_BACWK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163861182|gb|ABY42241.1| uroporphyrinogen decarboxylase [Bacillus weihenstephanensis KBAB4]
Length = 348
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHRAVQGNMDPSFLLAPWPV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|328885876|emb|CCA59115.1| Uroporphyrinogen III decarboxylase [Streptomyces venezuelae ATCC
10712]
Length = 358
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 179/328 (54%), Gaps = 14/328 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 36 PVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVTEITLQPVRRHKVDAAIYFSDIVVP 94
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G ++ GP + DPI T+ L+ DL + + + ++I +L +L
Sbjct: 95 LKAIGLDLDIKPGVGPVVADPIRTRAD--LDRLRDLTPDDVHYVTEAIGMLTAEL-GDTP 151
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG + H + + Y + + + LLD L+++++ +L QI AG
Sbjct: 152 LIGFAGAPFTLASYLVEGGPSRSHERTKAMMYGDPQLWADLLDRLAEITSAFLKVQIEAG 211
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 212 ASAVQLFDSWVGALAPADYRRSVMPASVKVFDAVAGY--GVPRIHFGVGTGELL-GLMGE 268
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GSG 315
++ +G+DW VPL A ++ GP +QGNLDP L G +V+ + +L G
Sbjct: 269 AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAGREVVEAKTDEVLAAAKGLE 326
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHG+ P +DP + LV+ V +
Sbjct: 327 GHVFNLGHGVMPSMDPDALTRLVEYVHT 354
>gi|196037564|ref|ZP_03104875.1| uroporphyrinogen decarboxylase [Bacillus cereus NVH0597-99]
gi|301052719|ref|YP_003790930.1| uroporphyrinogen decarboxylase [Bacillus anthracis CI]
gi|196031806|gb|EDX70402.1| uroporphyrinogen decarboxylase [Bacillus cereus NVH0597-99]
gi|300374888|gb|ADK03792.1| uroporphyrinogen decarboxylase [Bacillus cereus biovar anthracis
str. CI]
Length = 348
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGIHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|284053030|ref|ZP_06383240.1| uroporphyrinogen decarboxylase [Arthrospira platensis str. Paraca]
gi|291566307|dbj|BAI88579.1| uroporphyrinogen III decarboxylase [Arthrospira platensis NIES-39]
Length = 354
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 182/339 (53%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR +R+++ +F D + VE++LQP R +
Sbjct: 10 LLRAARGEALDRPPVWMMRQAGRYMKAYRDLREQYPSFRDRSEKTDIAVEISLQPFRAFA 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLNYLLPIF 124
D ILFSDIL +G + VE++GP +D PI TQ +I L+P + L ++ I
Sbjct: 70 PDGVILFSDILTPLPGIGIDFDIVESKGPIIDPPIRTQSQIDQLHPIEPEASLPFIREIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+ LR ++ N ++GF GAPWT+A+Y I G KD+ + A+ + L L
Sbjct: 130 QT---LRHEVGNKAAVLGFVGAPWTLAAYAIEGKSSKDYTIIKSMAFSEPAMLHQFLGKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A Y QI +G V+Q+FD+ AG L ++E +A +++ V+ K+P+ I
Sbjct: 187 ASAIATYACYQIDSGAQVVQMFDSWAGQLSPQDYETFALPYQQQVVKQVKAKHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A + VQGN+DP L + D
Sbjct: 247 YINGSAGILERMGK-SGVDMISVDWTVDMAEARNRIGHHLGVQGNIDPCVLFGSKDTIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHG+ + +NV +T +
Sbjct: 306 RILETIRKAGNRGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|56419196|ref|YP_146514.1| uroporphyrinogen decarboxylase [Geobacillus kaustophilus HTA426]
gi|56379038|dbj|BAD74946.1| uroporphyrinogen decarboxylase [Geobacillus kaustophilus HTA426]
Length = 347
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 184/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 12 LRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G NV GP + +PI + + + ++P D+ +
Sbjct: 71 DAAILYKDIMTPLPAIGVNVEIQGGIGPVIANPIRSLQDVERLGEIDPEHDVPY-----V 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 126 FETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 185 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVSADDYRTFIKPAMARIFAALREE--GAPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 243 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 301
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 302 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLT 337
>gi|315502678|ref|YP_004081565.1| uroporphyrinogen decarboxylase [Micromonospora sp. L5]
gi|315409297|gb|ADU07414.1| uroporphyrinogen decarboxylase [Micromonospora sp. L5]
Length = 380
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+RR+ DAAILFSDI+V
Sbjct: 55 PVWFMRQAGRSLPEYREIRANVP-MLESCRRPDLVTEITLQPVRRHGVDAAILFSDIVVP 113
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V GP + +P+ T ++ + P ++Y+ + + + P
Sbjct: 114 VAAAGIDLDIVPGTGPVVAEPVRTAADVERITPIGRDDVSYVDEAVRRLVVELGDTP--- 170
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + + Y + ++ L L++V+ +L QI A
Sbjct: 171 -LIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCARLAEVTLAFLQVQIDA 229
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L E ++ + ++ + I F G G +L
Sbjct: 230 GVSAVQLFDSWAGALSEADYRRFVLPHSTYVLGGLADA--GVPRIHFGVGTGELLGAMGE 287
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
++ +G+DW PL A + + VQGNLDP L+ G V+ V I++ + P
Sbjct: 288 -AGADVVGVDWRTPLDVATGRIGPDKAVQGNLDPTVLLAGWPVVEAEVRRIVEQGRAAPG 346
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P+ DP+ + +V V
Sbjct: 347 HVFNLGHGVLPETDPEVLTRVVALV 371
>gi|91762524|ref|ZP_01264489.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062164|gb|AAZ21167.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718326|gb|EAS84976.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 313
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/321 (36%), Positives = 178/321 (55%), Gaps = 11/321 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R+IRK +F+++C + E+TLQP++R++ DAAI+FSDIL+I L
Sbjct: 1 MRQAGRYLPEFREIRKLNPDFINLCLNENLSSEITLQPLKRFDLDAAIIFSDILMIPYGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI-SILRKKLPNHITLIGF 143
+ V+F +N GP++ + ++I ++ ID F+ L P+++SI + L + LIGF
Sbjct: 61 NQEVKFEKNFGPKLGLLDLEKISKID-EID-FVEKLYPVYKSIKKVSEDNLIKNKNLIGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ YMI+ K F ++ N +L L ++ QI G VI
Sbjct: 119 VGAPWTLLVYMINKHSPKKELVKDFF--KDEFLINRVLIILEKFLKLHIDQQIKNGATVI 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ AG L E + NY +++ ++ N I F +G KNY + +
Sbjct: 177 QIFDSWAGLLEEKDLPNYVYVPTLNLVNYIKSL--NIPVICFPRGIKNY-KNYCDIVKPD 233
Query: 264 AIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
A+ +D+ V P+S E++ PVQG LDP L+ + + L+ P+IFNLG
Sbjct: 234 AVNIDYDVDPVSACKEIK--IPVQGGLDPKILLTDKENLKKETLKYLNTFKDHPYIFNLG 291
Query: 323 HGITPQVDPKNVLDLVKTVRS 343
HG+ P+ +P V LVK V+
Sbjct: 292 HGVLPETNPNMVEYLVKIVKD 312
>gi|172045728|sp|Q5L284|DCUP_GEOKA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 345
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 184/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G NV GP + +PI + + + ++P D+ +
Sbjct: 69 DAAILYKDIMTPLPAIGVNVEIQGGIGPVIANPIRSLQDVERLGEIDPEHDVPY-----V 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVSADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLT 335
>gi|290956582|ref|YP_003487764.1| uroporphyrinogen decarboxylase [Streptomyces scabiei 87.22]
gi|260646108|emb|CBG69201.1| uroporphyrinogen decarboxylase [Streptomyces scabiei 87.22]
Length = 359
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 178/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR++ DAAI FSDI+V
Sbjct: 37 PVWFMRQAGRSLPEYLKVRQGI-GMLDSCMRPELVTEITLQPVRRHHVDAAIYFSDIVVP 95
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI ++ ++ L DL + + ++I +L +L I
Sbjct: 96 LKAIGVDLDIKPGVGPVVEKPIRSRADLAQLR---DLTPEDVSYVTEAIGMLTAEL-GEI 151
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + + + Y + + LLD L+ +++ +L QI A
Sbjct: 152 PLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDRLAGITSAFLRVQIEA 211
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ AG L ++ + ++ AV I F G G +L
Sbjct: 212 GASAVQLFDSWAGALAPADYRRSVLPASAKVFDAVAGY--GVPRIHFGVGTGELL-GLMG 268
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + +LD G
Sbjct: 269 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPTVLFAGTEAVEAKTREVLDAAAGL 326
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHG+ P DP ++ LV+ V +
Sbjct: 327 EGHVFNLGHGVMPSTDPDSLTRLVEYVHT 355
>gi|167635369|ref|ZP_02393683.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0442]
gi|170707610|ref|ZP_02898062.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0389]
gi|177654151|ref|ZP_02936124.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0174]
gi|229601385|ref|YP_002865616.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0248]
gi|167529197|gb|EDR91950.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0442]
gi|170127385|gb|EDS96260.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0389]
gi|172080858|gb|EDT65938.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0174]
gi|229265793|gb|ACQ47430.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0248]
Length = 356
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 15 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 74 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 131 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 188 IDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 246 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 304
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P +IFNLGHG+ P+V+P + L
Sbjct: 305 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLT 343
>gi|30261187|ref|NP_843564.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Ames]
gi|47777891|ref|YP_017695.2| uroporphyrinogen decarboxylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184020|ref|YP_027272.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Sterne]
gi|165871836|ref|ZP_02216479.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0488]
gi|170688112|ref|ZP_02879324.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0465]
gi|254682753|ref|ZP_05146614.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CNEVA-9066]
gi|254725544|ref|ZP_05187326.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A1055]
gi|254734170|ref|ZP_05191883.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Western
North America USA6153]
gi|254740186|ref|ZP_05197878.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Kruger B]
gi|254753525|ref|ZP_05205561.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Vollum]
gi|254758623|ref|ZP_05210650.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Australia
94]
gi|38257417|sp|Q81U23|DCUP_BACAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|30254801|gb|AAP25050.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Ames]
gi|47551596|gb|AAT30170.2| uroporphyrinogen decarboxylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177947|gb|AAT53323.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Sterne]
gi|164712413|gb|EDR17947.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0488]
gi|170668007|gb|EDT18758.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0465]
Length = 348
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 IDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|255084091|ref|XP_002508620.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226523897|gb|ACO69878.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 390
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 177/343 (51%), Gaps = 9/343 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++ +++ +G ++ PP W+MRQAGRY+ EYR + K +F + + VE+TLQ
Sbjct: 48 DAKEPRLVRAAKGLPVDRPPAWMMRQAGRYMKEYRDLAVKVPSFRERSENTDLIVEITLQ 107
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P R + D ILFSDIL A+G + +GP +D PI E + ++DL +
Sbjct: 108 PFRAFKPDGVILFSDILTPLPAIGIPFEIDDYKGPILDQPIRDAEGLKMMHDLDL---DM 164
Query: 121 LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LP + ++++ LRK++ + ++GF GAPWT+A+Y++ GG + +
Sbjct: 165 LPFVGEALTTLRKEVGDEAAVLGFVGAPWTLATYIVEGGSSSTYKTIKSMTMTEPEVLKS 224
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L ++D +Y+ QI AG +QIFD+ G L H +E ++ + +++ VR +P
Sbjct: 225 ILSKVADAVGDYVGYQIDAGAQCVQIFDSWGGQLPPHMWEQWSKPYIQQVVDKVRATHPG 284
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
+A G+G +L+ T + IGLDW++ + + VQGN+DP L +
Sbjct: 285 TPLTLYANGSGGLLERM-ATTGVDCIGLDWTIDMEDGRRRVGDKAVQGNVDPAVLFAPPE 343
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVK 339
+ V ++ G I NLGHG+ TP+ K D K
Sbjct: 344 AIEKAVKDVVKKAGPTGHILNLGHGVLVGTPEESVKLFFDTAK 386
>gi|227502555|ref|ZP_03932604.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49725]
gi|306835120|ref|ZP_07468160.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49726]
gi|227076717|gb|EEI14680.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49725]
gi|304568977|gb|EFM44502.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49726]
Length = 347
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 176/347 (50%), Gaps = 16/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ I++ G + PP+WLMRQAGR LPEYR R+ + L+ C+ PE E+TLQP+R
Sbjct: 9 RAPIIDAALGRTPSRPPVWLMRQAGRSLPEYRAAREGI-SMLESCFMPELLAEITLQPVR 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++ DAAILFSDI+V A G NV V GP M+ ++ + + + + +
Sbjct: 68 RHDVDAAILFSDIVVPLKAAGVNVDIVPGRGPVMEKAVREKGDI--GKLPILEADVPEVA 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q I+ + +L LIGF GAP+T+ASY+I GG K+H + + + ++ L+ L
Sbjct: 126 QGIAGILGELTETQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHAEPETWHMLMRRL 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+L Q+ AG+D +Q+FD+ AG L E ++ + I+++V + I
Sbjct: 186 VPTIINFLRVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSQEILASV-----DIPRIH 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F G G +L+ S +G+D+ V + A + +QGNLDP L G+ +
Sbjct: 241 FGVGTGELLQAMSE-AGSEVMGVDYRVAMDAAAQRVNSRVLQGNLDPALLFAGDDAVRQA 299
Query: 305 VNAILDVLGSG-------PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I + I+NLGHG+ P D + + V + E
Sbjct: 300 VRTIRGEVERAQQCGDIDTHIWNLGHGVLPTTDAEAITRAVSIIHEE 346
>gi|308810174|ref|XP_003082396.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116060864|emb|CAL57342.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 401
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 180/340 (52%), Gaps = 10/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PPIW+MRQAGRY+ Y+ + K+ F + T + VE++LQP R +
Sbjct: 63 MLRAIRGEDVERPPIWMMRQAGRYMKVYQDLCKRHTTFRERSETVDLAVEISLQPYRAFK 122
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + V+ GP + +P+ +E+ + +L +P + +
Sbjct: 123 PDGVILFSDILTPLQGMNIPFDIVKGTGPIIFNPV--REMEDIKAITNLEPEKSVPFVGE 180
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ +LR ++ N TL+GFCGAP+T+ASY++ GG + + A+ + L++ L+
Sbjct: 181 SLKLLRSEIGNEATLLGFCGAPFTLASYIVEGGTSSHYKVIKKMAFDAPAVYEALMNKLT 240
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D EY Q AG V+QIFD+ A +FE Y + RI++ ++ +P+ I +
Sbjct: 241 DAVIEYTRYQADAGAQVVQIFDSWASEFSPADFEKYCLPYLQRIVAECKKTHPHVPLIIY 300
Query: 246 AKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
+ G+G L+ RL +NA + LD +V ++ A L VQGN+DP+ L +
Sbjct: 301 SSGSGGFLE---RLATTNADVLSLDGTVDMADARRRLGANQAVQGNMDPVHLFASQDFIT 357
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ ++ G + NLGHG+ +NV +TVR
Sbjct: 358 KKVHETIEKAGKSRHVMNLGHGVMVGTPEENVAHFFQTVR 397
>gi|16804251|ref|NP_465736.1| uroporphyrinogen decarboxylase [Listeria monocytogenes EGD-e]
gi|224500988|ref|ZP_03669295.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-561]
gi|254826899|ref|ZP_05231586.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N3-165]
gi|254831351|ref|ZP_05236006.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 10403S]
gi|255029962|ref|ZP_05301913.1| uroporphyrinogen decarboxylase [Listeria monocytogenes LO28]
gi|284802659|ref|YP_003414524.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5578]
gi|284995801|ref|YP_003417569.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5923]
gi|23813994|sp|Q8Y564|DCUP_LISMO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|16411682|emb|CAD00290.1| hemE [Listeria monocytogenes EGD-e]
gi|258599279|gb|EEW12604.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N3-165]
gi|284058221|gb|ADB69162.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5578]
gi|284061268|gb|ADB72207.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5923]
Length = 353
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 187/333 (56%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI + +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L+
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLEE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLG 313
+ + + +G+DW ++ A + +QGNLDP L+ + + + N IL VL
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPEKCLKEA-NRILQEGVLE 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
G +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 313 PG-YIFNLGHGVFPEVPPEMLKQLTNYIHERSE 344
>gi|159903610|ref|YP_001550954.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9211]
gi|238056494|sp|A9BAY8|DCUP_PROM4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|159888786|gb|ABX09000.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9211]
Length = 351
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 182/343 (53%), Gaps = 18/343 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G ++ PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MTQSVPLLLRAARGENVDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDL 115
QP R + D ILFSDIL +G + VE++GP + DPI + + L+P+
Sbjct: 61 QPFRAFKPDGVILFSDILTPLPGMGIDFDIVESKGPLIKDPIRNESQIKTLRALSPSESC 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 121 PF-----VGEVLKRLRDSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD +D A YL QI +G V+Q+FD+ AG L ++E +AA ++I V++
Sbjct: 176 LLHKLLDHFADSIANYLCYQIDSGAQVVQMFDSWAGQLSPIDYETFAAPYQKKVIDLVKK 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P I + G+ +L+ R T + + LDW+V ++ L + +QGN+DP L
Sbjct: 236 THPETPMILYISGSAGVLERMGR-TGVDIVSLDWTVDMAEGCARLPQNVGIQGNVDP-GL 293
Query: 295 VVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
+ G+ I I+D + FI NLGHGI P +N
Sbjct: 294 LFGSPESIRA--RIIDTVKKAKGRKFILNLGHGILPGTPEENA 334
>gi|323309846|gb|EGA63049.1| Hem12p [Saccharomyces cerevisiae FostersO]
Length = 367
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 182/348 (52%), Gaps = 37/348 (10%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+RRY
Sbjct: 12 ILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNN-RDFFQTCRDAEIASEITIQPVRRYR 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI A+G V +E +GP +P+ E +L+ +D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDV-LKELDW 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW--- 179
F++I++ R KL + L GFCG PWT+ YM G G +R+F + A W
Sbjct: 130 AFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEG------GGSRLFRF----AKQWINM 179
Query: 180 -------LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I
Sbjct: 180 YPELSHKLLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAER 239
Query: 233 VRRK------YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PV 285
V ++ I FAKG+ Y L + + + LDWS A+++ K +
Sbjct: 240 VPKRLQELGIMEQIPMIVFAKGSWYALDKL-CCSGFDVVSLDWSWDPREAVKINKNRVTL 298
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDP 331
QGNLDP + +V+ V +++ G G +I N GHG P +DP
Sbjct: 299 QGNLDPGVMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDP 346
>gi|218896123|ref|YP_002444534.1| uroporphyrinogen decarboxylase [Bacillus cereus G9842]
gi|228904029|ref|ZP_04068135.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 4222]
gi|228964128|ref|ZP_04125252.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|226723865|sp|B7IKE2|DCUP_BACC2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218545162|gb|ACK97556.1| uroporphyrinogen decarboxylase [Bacillus cereus G9842]
gi|228795562|gb|EEM43045.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228855625|gb|EEN00179.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 4222]
Length = 348
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|229028856|ref|ZP_04184957.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1271]
gi|228732427|gb|EEL83308.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1271]
Length = 348
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|257060909|ref|YP_003138797.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8802]
gi|256591075|gb|ACV01962.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8802]
Length = 354
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 184/342 (53%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R K+ +F D + +E++LQP + +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSENADLAIEISLQPWKAFR 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLFLNYLLP 122
D I+FSDIL +G + E++GP +D PI TQE ++ L+P LP
Sbjct: 70 PDGVIMFSDILTPLPGIGISFEIPESKGPMIDSPIRTQEQVDNLHSLDPEAS------LP 123
Query: 123 IFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I LR ++ N T++GF G+PWT+A+Y I G KD+ + A+ + L
Sbjct: 124 FIKTILKALRDEVKNEATVLGFVGSPWTLAAYAIEGKSSKDYANIKRMAFCEPAILHQFL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+D A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+
Sbjct: 184 SKLADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYKVFALPYQQQVVRQVKATHPDTP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + + + +DW+V ++ A + L + VQGN+DP L QV
Sbjct: 244 LILYISGSAGVLELMGQ-SGVDIVSVDWTVDMADARQRLGRNMMVQGNIDPGILFGSKQV 302
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D + + G G I NLGHG+ +NV +T +
Sbjct: 303 IRDRILDTVQKAGKGGHILNLGHGVLVGTPEENVGYFFETAK 344
>gi|118138487|pdb|2INF|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138488|pdb|2INF|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138489|pdb|2INF|C Chain C, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138490|pdb|2INF|D Chain D, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
Length = 359
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 192/352 (54%), Gaps = 19/352 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R+ + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 7 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 65
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + +++ ++P
Sbjct: 66 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 125
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D+ Y+L ++I +L + N + LIGF GAP+T+ASYM GG K++ + + F Y
Sbjct: 126 QDV--PYVL---ETIKLLVNEQLN-VPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYS 179
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S
Sbjct: 180 MPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSE 239
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ ++ N I F GA ++ ++ L + +GLDW + + A VQGNLDP
Sbjct: 240 LAKE--NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPS 296
Query: 293 RLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ +V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 297 ILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHE 348
>gi|291287170|ref|YP_003503986.1| uroporphyrinogen decarboxylase [Denitrovibrio acetiphilus DSM
12809]
gi|290884330|gb|ADD68030.1| uroporphyrinogen decarboxylase [Denitrovibrio acetiphilus DSM
12809]
Length = 337
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 185/348 (53%), Gaps = 29/348 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L + G PP+W MRQAGRY+ EYR IRKK +FL++C TP+ E+TLQPI +
Sbjct: 7 LLRTINGEKTERPPVWFMRQAGRYMEEYRAIRKKV-SFLELCKTPDLCTEVTLQPIEAFG 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
FD AILFSDIL+ + +G + F N P + +PI T ++ L+P D+
Sbjct: 66 FDNAILFSDILIPIEPMGIQLDF--NPAPVIANPIRTMADADKLRELDPEKDVPF----- 118
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ L K L + LIGF GAP+T+A YM+ G K+ + + + + +++
Sbjct: 119 VMETVRKLVKAL--DVPLIGFSGAPFTLACYMVEGSGSKNFENIKTLIHTDPETYRIMME 176
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + +YL AQI G V+Q+FDT AG + +++E Y V I + ++ A
Sbjct: 177 KLTSSTLKYLQAQIDNGAHVVQMFDTWAGVVSPYDYEKYIFPYVEHIANNLK----GAPL 232
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNLDPMRLVVGNQV 300
I FAK + +L + +G+DW L A E +G +QGN DP+ L +
Sbjct: 233 IYFAKDSFSFYDTIGKL-NCAGMGVDWKATLKDADERLSKGKFVLQGNFDPVLLFGSKEA 291
Query: 301 MIDGVNAIL----DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + I+ D+ G IFNLGHGI P +NV LVK V+ E
Sbjct: 292 IKETAEKIIAEGKDLKGH---IFNLGHGILPPTPRENVEYLVKIVKGE 336
>gi|239983040|ref|ZP_04705564.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
gi|291454871|ref|ZP_06594261.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
gi|291357820|gb|EFE84722.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
Length = 354
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 174/329 (52%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ LD C PE E+T+QP+RR+ DAAI FSDI+V
Sbjct: 32 PVWFMRQAGRSLPEYRKVREGIA-MLDSCMRPELVTEITMQPVRRHGVDAAIYFSDIVVP 90
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI T+ ++ L DL + + ++I +L +L
Sbjct: 91 LKAIGIDLDIKPGVGPVVEQPIRTRADLARLR---DLTPEDVWYVTEAIGLLTAEL-GAT 146
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + Y + + LLD L+D++A +L QI A
Sbjct: 147 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPELWADLLDRLADITAGFLKVQIEA 206
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 207 GASAVQLFDSWVGALAPADYRRSVMPASRKVFEAVAGY--GVPRIHFGVGTGELL-GLMG 263
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
++ +G DW +PL A ++ GP VQGNLDP L + + +L G
Sbjct: 264 EAGADVVGADWRIPLDEA--SRRIGPGKAVQGNLDPAVLFAPTEAVRAKTGEVLQAAEGL 321
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP + LV+ V +
Sbjct: 322 EGHIFNLGHGVLPDTDPDALTRLVEDVHT 350
>gi|229016368|ref|ZP_04173312.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1273]
gi|229022598|ref|ZP_04179124.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1272]
gi|228738689|gb|EEL89159.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1272]
gi|228744924|gb|EEL94982.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1273]
Length = 348
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G P W MRQAGR PEYR+I++K F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKHSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRIFIKPAMERIFAEVRKM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|75758788|ref|ZP_00738902.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493692|gb|EAO56794.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 356
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 15 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 74 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 131 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 188 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 246 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 304
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P +IFNLGHG+ P+V+P + L
Sbjct: 305 IEEHVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLT 343
>gi|33240529|ref|NP_875471.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|45476863|sp|Q7VBL3|DCUP_PROMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33238057|gb|AAQ00124.1| Uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 351
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 181/336 (53%), Gaps = 18/336 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +N PP+W+MRQAGRY+ YR++R +F + P+ + E+++QP R +
Sbjct: 8 LLRAARGESVNRPPVWMMRQAGRYMKVYRELRDNHPSFRERSENPDLSYEISMQPFREFK 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLP 122
D ILFSDIL +G + VE++GP + DPI T E + L P + L
Sbjct: 68 PDGVILFSDILTPLPGMGIDFDIVESKGPLINDPIRTLEQVKTLRPLEPQVSLPF----- 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q + LL+
Sbjct: 123 VGEVLGRLRESVKNEAAVLGFVGAPWTLAAYVVEGKSSKNYSVIKAMAFQQPDLLHKLLN 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ A YL QI +G V+Q+FD+ AG L +++NYAA +++ V++ +P+
Sbjct: 183 HFAESIANYLKYQIESGAQVVQMFDSWAGQLSPIDYDNYAAPYQKKVVDLVKQSHPDTPM 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I + G+ +++ + T + + LDW+V ++ L +QGN+DP ++ G M
Sbjct: 243 ILYISGSAGVIERMAK-TGVDIVSLDWTVDMAEGCARLPNNIGIQGNVDP-GILFGTPKM 300
Query: 302 IDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
I I+D + I NLGHGI P +N
Sbjct: 301 IQ--ERIIDTVKKAKGRKHILNLGHGILPGTPEENA 334
>gi|119717896|ref|YP_924861.1| uroporphyrinogen decarboxylase [Nocardioides sp. JS614]
gi|167012316|sp|A1SMY9|DCUP_NOCSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119538557|gb|ABL83174.1| uroporphyrinogen decarboxylase [Nocardioides sp. JS614]
Length = 345
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 175/337 (51%), Gaps = 9/337 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + P+W MRQAGR LPEY +R+ L+ C P+ VE+TLQP+RRY
Sbjct: 13 LKAARGEPVPHTPVWYMRQAGRSLPEYLAVREGI-GMLESCMDPDLVVEITLQPVRRYGV 71
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI FSDI++ A+G ++ GP + P+ T P DL ++ I +++
Sbjct: 72 DAAIFFSDIVLPLKAVGVDLDIKPGVGPVVAHPVRTLADVEAIP--DLTPEHVPFITEAV 129
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L +L LIGF GAP+TVASY++ GG K+H + + + ++ LL ++ +
Sbjct: 130 RGLVGEL-GGTPLIGFAGAPFTVASYLVEGGPSKEHARTKAMMFGAPDVWDALLRKIAGI 188
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
SA YL Q+ AG +Q+FD+ AG L ++ + R++ R I F
Sbjct: 189 SASYLEVQVAAGASAVQLFDSWAGALTPADYRAFVMPHSARVLE--RAGALGVPRIHFGV 246
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
G +L ++ +G+DW PL+ A+ L + VQGNLDP + +VM
Sbjct: 247 GTANLL-GLMGEAGADVVGVDWRTPLAHAIALVGDRGVQGNLDPTLVFAPTEVMTARAAE 305
Query: 308 ILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I++ + IFNLGHG+ P DP + L + V++
Sbjct: 306 IVEAGRAARGHIFNLGHGVIPSTDPDQLKRLTEFVQT 342
>gi|257053384|ref|YP_003131217.1| uroporphyrinogen decarboxylase [Halorhabdus utahensis DSM 12940]
gi|256692147|gb|ACV12484.1| uroporphyrinogen decarboxylase [Halorhabdus utahensis DSM 12940]
Length = 335
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 176/341 (51%), Gaps = 18/341 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G PP+WLMRQAGR+LPEYR++R+++ +FL+ TPE E+TLQP RY
Sbjct: 5 LVRAARGERTERPPVWLMRQAGRHLPEYRELREEY-DFLEAVTTPEIAAEITLQPWDRYR 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLP 122
D ++FSDIL I + LG + GP + DP + Y I L+Y
Sbjct: 64 PDGVVMFSDILTILEPLGFDYHIESGTGPVVESPIADPGDVPQAYA---PIQESLDY--- 117
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + + L ++ +IGF G P+T+ASY ++G ++H R F ++ AF LL
Sbjct: 118 VGELLDRLDTQVGEETGIIGFAGGPFTLASYAVAGRPTRNHYPLRQFKARHPEAFADLLS 177
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D E+L Q+ G DV+Q+FDT+AG L + + I++ + +
Sbjct: 178 IVADAVREFLSYQVDHGADVVQLFDTYAGVLPPAAYREFIQPLHREILTDI-----DVPT 232
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F + G L T ++ + LDW+V + A E + PVQGNLDP L G + +
Sbjct: 233 ILFVRNMGGRLDQL-AATGADVVSLDWTVEMDTAREQLGDRPVQGNLDPSVLFAGPETVR 291
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +++ G I NLGHG+ ++V V+T +S
Sbjct: 292 ERTREVIEAAGDQGHILNLGHGVHQDTPIESVEAFVETAKS 332
>gi|46908446|ref|YP_014835.1| uroporphyrinogen decarboxylase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093737|ref|ZP_00231488.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 4b
H7858]
gi|254825224|ref|ZP_05230225.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-194]
gi|254853336|ref|ZP_05242684.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-503]
gi|254931675|ref|ZP_05265034.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HPB2262]
gi|254992116|ref|ZP_05274306.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-064]
gi|300763978|ref|ZP_07073974.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N1-017]
gi|67460305|sp|Q71XF3|DCUP_LISMF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|46881717|gb|AAT05012.1| uroporphyrinogen decarboxylase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017894|gb|EAL08676.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 4b
H7858]
gi|258606700|gb|EEW19308.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-503]
gi|293583230|gb|EFF95262.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HPB2262]
gi|293594470|gb|EFG02231.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-194]
gi|300515319|gb|EFK42370.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N1-017]
gi|328465795|gb|EGF36983.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 1816]
gi|332312664|gb|EGJ25759.1| Uroporphyrinogen decarboxylase [Listeria monocytogenes str. Scott
A]
Length = 353
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 186/333 (55%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI + +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTMFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLG 313
+ + + +G+DW ++ A + +QGNLDP L+ + + + N IL VL
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPEKCLKEA-NRILQEGVLE 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
G +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 313 PG-YIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|226224820|ref|YP_002758927.1| uroporphyrinogen III decarboxylase [Listeria monocytogenes
Clip81459]
gi|259645152|sp|C1KXG7|DCUP_LISMC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|225877282|emb|CAS05996.1| Putative uroporphyrinogen III decarboxylase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 353
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 186/333 (55%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI + +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTMFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INAGTSAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLG 313
+ + + +G+DW ++ A + +QGNLDP L+ + + + N IL VL
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPEKCLKEA-NRILQEGVLE 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
G +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 313 PG-YIFNLGHGVFPEVPPEMLKKLTNYIHERSE 344
>gi|228919902|ref|ZP_04083257.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839718|gb|EEM85004.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 348
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 185/335 (55%), Gaps = 16/335 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL +QI+AG +QIFD+ G + ++ + ++ RI + VR+
Sbjct: 180 MDKLADMVITYLKSQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVLKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ + V ILD P +IFNLGHG+ P+V+P +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTL 331
>gi|116873645|ref|YP_850426.1| uroporphyrinogen decarboxylase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466540|sp|A0AKW5|DCUP_LISW6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116742523|emb|CAK21647.1| uroporphyrinogen decarboxylase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 350
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 182/331 (54%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T ++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGIDVEIKSGIGPVIHNPIRTFQDVDKLSIFKPEIEV--PYVL---DTIKLLADDM- 134
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASYMI GG K++ + F Y+ ++ L++ L ++A YLIAQ
Sbjct: 135 LEVPLIGFAGAPFTLASYMIEGGPSKNYHLTKSFMYREPEVWSILMEKLGRMTATYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L+
Sbjct: 195 INAGASAVQLFDSWVGALSRADYTKYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLEE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW L+ A + +QGNLDP L+ + + + I + +
Sbjct: 255 WETMP-LDVVGVDWRETLTGARKKVPSKAIQGNLDPSTLLAPEKCLEEAERIIQEGILKP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L + RSE
Sbjct: 314 GYIFNLGHGVFPEVQPEMLKKLTNYIHDRSE 344
>gi|318041195|ref|ZP_07973151.1| uroporphyrinogen decarboxylase [Synechococcus sp. CB0101]
Length = 352
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 179/339 (52%), Gaps = 12/339 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++
Sbjct: 1 MTETAPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSENPDLSFEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G N VE++GP + DPI + + + LNP +
Sbjct: 61 QPFEAFKPDGVILFSDILTPLPGMGINFDIVESKGPLIHDPIRSMAQVEALRPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++ LR + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLTRLRSAVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHKLLDHFAESIAAYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +++ R T + + LDW+V ++ L L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVIERMAR-TGVDIVSLDWTVDMAEGLARLPEHVGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ + ++ + I NLGHGI P +N
Sbjct: 295 FGSKEAIQARIDDTVRKARGRKHILNLGHGILPGTPEEN 333
>gi|313617652|gb|EFR89941.1| uroporphyrinogen decarboxylase [Listeria innocua FSL S4-378]
Length = 350
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 182/331 (54%), Gaps = 15/331 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+ G +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L
Sbjct: 195 INVGASAVQLFDSWVGALSRADYAQYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ + + +G+DW + A + +QGNLDP L+ + + + + + +
Sbjct: 255 WETMP-LDVVGVDWRETIITARQKVPTKAIQGNLDPSTLLAPEKCIAETERILQEGILEP 313
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+IFNLGHG+ P+V P+ + L K + RSE
Sbjct: 314 GYIFNLGHGVFPEVPPEMLKKLTKYIHERSE 344
>gi|88770678|gb|ABD51942.1| chloroplast uroporphyrinogen decarboxylase [Guillardia theta]
Length = 404
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 178/341 (52%), Gaps = 6/341 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ EYR++ KK+ F + PE E++LQP Y
Sbjct: 66 LLRAARGEKVEMTPVWMMRQAGRHMQEYRELVKKYPTFRERSEIPEVATEISLQPWEAYG 125
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D ILFSDIL +G E GP++ P+ T+E + + + Q++
Sbjct: 126 VDGCILFSDILTPLPGMGVEFDIKETSGPKLKPLRTKEQIDTMKICSDWSTSMPFVKQTL 185
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LRK++ N T++GF G P+T+A+Y++ GG ++ + + Y N +L+ L++
Sbjct: 186 GELRKRVGNSATVLGFVGLPFTLATYLVEGGTSSEYLEIKKMMYYNPSLLTAMLENLAEN 245
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y QI AG VIQIFD+ AG L +++ +A +++A+++K+P+ I +
Sbjct: 246 IGNYANFQIEAGAQVIQIFDSWAGSLSPEDYDLFAFPYQKMVVNAIKKKHPDVPIIIYIA 305
Query: 248 GAGYMLKNYRRLTDS--NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+G + R+ D+ + + LDW+V + A + ++ +QGNLDP L ++ +
Sbjct: 306 KSG---AHVERMADTGVDIVSLDWTVTIDEARRRIGRDIGLQGNLDPAILYGPEHIIKER 362
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+IL + I NLGHGI NV V TV + K
Sbjct: 363 TESILKMAKGRHHIMNLGHGIEATTPQPNVKFFVDTVHAFK 403
>gi|303274130|ref|XP_003056388.1| uroporphyrinogen decarboxylase [Micromonas pusilla CCMP1545]
gi|226462472|gb|EEH59764.1| uroporphyrinogen decarboxylase [Micromonas pusilla CCMP1545]
Length = 414
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 187/354 (52%), Gaps = 19/354 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRK-KFKNFLDMCYTPEYTVELTLQPIRRY 66
+L +G ++ P+WL RQAGR+LPEY + +K K KNFL++ P+ E TLQP+RRY
Sbjct: 51 MLRAAKGEKVDRTPVWLFRQAGRHLPEYNEYKKVKNKNFLELLKDPKDVAECTLQPVRRY 110
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEG-PRMDPITT-QEIYLLNPNIDLF--LNYLLP 122
N DA ILFSDILV+A+A+ NV G ++P+ +++ L ++D+ L ++L
Sbjct: 111 NVDAGILFSDILVVAEAMNINVEMPGGRGIVVVNPLNKPEDLERLPSSVDVHKKLGHVLE 170
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ I+ K + LIGF APWT+ YM+ G K+ G ++ + + LLD
Sbjct: 171 AIKEINRQIDKENLGVPLIGFSAAPWTLLYYMVGGSSKKNTGNGMLWLRDHPKESRLLLD 230
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ V +YL AQIHAGV ++Q+F+ + E F N+A + RI +R ++P+
Sbjct: 231 SLTTVVIDYLDAQIHAGVHMVQVFEAMCEHIDEENFINFAYPCLERIAIEIRSRHPDTPI 290
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE---------GPVQGNLDPMR 293
+ F + A Y L +Y + + + +D ++ A + +E G +QGN DP
Sbjct: 291 LGFTRDAPYGL-HYLQHAGYDVMTVDTTMRGHDARAILQEEASARGVEPGQLQGNFDPAL 349
Query: 294 LVVGN----QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + GV +L G I NLG G+T + DP V V V +
Sbjct: 350 LHIDTGGDLKAIESGVKRMLTEFGPQKLIANLGAGLTGKEDPARVDFFVNCVHN 403
>gi|254421940|ref|ZP_05035658.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7335]
gi|196189429|gb|EDX84393.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7335]
Length = 354
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 180/334 (53%), Gaps = 16/334 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L QG + PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP + +
Sbjct: 10 LLRAAQGQSVERPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWKAFK 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFLNYLLP 122
D ILFSDI+ +G + E +GP +D PI +Q + L+P D + Y+
Sbjct: 70 PDGVILFSDIVTPLPGMGVAMDVAEGKGPIIDEPIRSQAQIDALTTLDP--DESMPYIRK 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I + LR+++ N T++GF GAPWT+A+Y++ G K + + A+ + LL
Sbjct: 128 ILGA---LREEVGNQSTVLGFVGAPWTLAAYIVEGKGSKTYSVIKNMAFSRPEMLHSLLS 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D A Y+ QI G V+Q+FD+ AG L +++ +A +I+ V+ +P+
Sbjct: 185 KIADNIAIYVRHQIDCGAQVVQLFDSWAGQLSPQDYKTFALPYQQQIVRQVKETHPDTPL 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQ 299
I G+ +L+ + + + +DWSV ++ A ++ GP VQGN+DP L +
Sbjct: 245 ILLVSGSAGVLELMGE-SGVDIVSVDWSVDMADA--RRRLGPNMMVQGNVDPGVLFGSKE 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
V+ D + + GS I NLGHGI P +N
Sbjct: 302 VIRDRIIDTVRKAGSKGHILNLGHGILPGTPEEN 335
>gi|218439622|ref|YP_002377951.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7424]
gi|226723868|sp|B7KKW4|DCUP_CYAP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218172350|gb|ACK71083.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7424]
Length = 353
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 186/340 (54%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G +E++GP +DP T Q+I L+P + D + ++ I
Sbjct: 70 PDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQQQIDHLHPFDPDQTVPFVKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LL L
Sbjct: 130 KT---LRQEVGNQSTVLGFVGAPWTLAAYAVEGKSSKTYSIIKSMAFSEPAILHQLLSKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMVASYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQQVVRQVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A + L KE VQGN+DP L + D
Sbjct: 247 YISGSAGVLERMGK-SGVDMISVDWTVDMAEARQRLGKEMKVQGNIDPGVLFGSQSFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + G+ I NLGHG+ NV +T ++
Sbjct: 306 RIVDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAKN 345
>gi|218902270|ref|YP_002450104.1| uroporphyrinogen decarboxylase [Bacillus cereus AH820]
gi|226723864|sp|B7JDM6|DCUP_BACC0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218538223|gb|ACK90621.1| uroporphyrinogen decarboxylase [Bacillus cereus AH820]
Length = 348
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 16/344 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 123 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAPHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V ILD P +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEEHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHE 340
>gi|228913753|ref|ZP_04077379.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228926221|ref|ZP_04089296.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228932465|ref|ZP_04095346.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229090126|ref|ZP_04221376.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-42]
gi|229120694|ref|ZP_04249937.1| Uroporphyrinogen decarboxylase [Bacillus cereus 95/8201]
gi|228662699|gb|EEL18296.1| Uroporphyrinogen decarboxylase [Bacillus cereus 95/8201]
gi|228693203|gb|EEL46914.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-42]
gi|228827155|gb|EEM72908.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228833474|gb|EEM79036.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228845945|gb|EEM90970.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 328
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 180/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G +V GP +D PI + +++ +NP D+ I +I +L ++
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEML 115
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQ
Sbjct: 116 D-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQ 174
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +QIFD+ G + ++ + ++ RI + VR I GA +++
Sbjct: 175 INAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNE 232
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ L + +GLDW +P+ A VQGN+DP L+ V+ + V ILD
Sbjct: 233 WHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQ 291
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P +IFNLGHG+ P+V+P + L +
Sbjct: 292 PGYIFNLGHGVFPEVNPDTLKRLTTFIHE 320
>gi|114556200|ref|XP_001153755.1| PREDICTED: similar to Chain A, Phe232leu Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 1 [Pan
troglodytes]
Length = 329
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 170/348 (48%), Gaps = 53/348 (15%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ-- 61
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQQP 73
Query: 62 ------PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID 114
P+RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + +
Sbjct: 74 VSCFLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPE 133
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ + L +FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ
Sbjct: 134 VVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRP 193
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+A + LL L+D YL+ Q+ AG +I D H +A + +
Sbjct: 194 QASHQLLRILTDALVPYLVGQVAAGAQIIFAKDGH-----------FALEELAQ------ 236
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
AGY +GLDW+V A E + K +QGNLDP
Sbjct: 237 --------------AGY-----------EVVGLDWTVAPKKARECVGKTVTLQGNLDPCA 271
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 LYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 319
>gi|167640255|ref|ZP_02398521.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0193]
gi|167511856|gb|EDR87236.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0193]
Length = 356
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/339 (34%), Positives = 184/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 15 ETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ +NP D+
Sbjct: 74 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY--- 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L
Sbjct: 131 --ILDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR
Sbjct: 188 IDKLADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA +++ + L + +GLDW +P+ A VQGN+DP L+ V
Sbjct: 246 PMIMHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSV 304
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ V ILD P +IFNLGHG+ P+V+P + L
Sbjct: 305 IEGHVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLT 343
>gi|317969675|ref|ZP_07971065.1| uroporphyrinogen decarboxylase [Synechococcus sp. CB0205]
Length = 352
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 183/337 (54%), Gaps = 8/337 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSSNAPLLLRAARGEQVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + ++ L P L
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIQDPIRSMAQVEALTP---LNPA 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 118 ETMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPQIL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +
Sbjct: 178 HKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
P+ FI + G+ +++ + T + + LDW+V ++ L E VQGN+DP L
Sbjct: 238 PDTPFILYISGSAGVIERMAK-TGVDIVSLDWTVDMAEGLARMPEHIGVQGNVDPGLLFG 296
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ D ++ + I NLGHGI P +N
Sbjct: 297 SQDAIRDRIDDCVRKARGRKHILNLGHGILPGTPEEN 333
>gi|261418905|ref|YP_003252587.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC61]
gi|319765722|ref|YP_004131223.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC52]
gi|261375362|gb|ACX78105.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC61]
gi|317110588|gb|ADU93080.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC52]
Length = 345
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 184/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ +
Sbjct: 69 DAAILYKDIMTPLPAIGVDVEIQGGVGPVIANPICSLQDVERLGEIDPEHDVPY-----V 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLT 335
>gi|65318454|ref|ZP_00391413.1| COG0407: Uroporphyrinogen-III decarboxylase [Bacillus anthracis
str. A2012]
Length = 328
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 180/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G +V GP +D PI + +++ +NP D+ I +I +L ++
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEML 115
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQ
Sbjct: 116 D-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDKLADMVITYLKAQ 174
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +QIFD+ G + ++ + ++ RI + VR I GA +++
Sbjct: 175 INAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNE 232
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ L + +GLDW +P+ A VQGN+DP L+ V+ + V ILD
Sbjct: 233 WHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQ 291
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P +IFNLGHG+ P+V+P + L +
Sbjct: 292 PGYIFNLGHGVFPEVNPDTLKRLTTFIHE 320
>gi|47097353|ref|ZP_00234907.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 1/2a
F6854]
gi|254899086|ref|ZP_05259010.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J0161]
gi|254912773|ref|ZP_05262785.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J2818]
gi|254937100|ref|ZP_05268797.1| uroporphyrinogen decarboxylase [Listeria monocytogenes F6900]
gi|47014276|gb|EAL05255.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609702|gb|EEW22310.1| uroporphyrinogen decarboxylase [Listeria monocytogenes F6900]
gi|293590767|gb|EFF99101.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J2818]
Length = 353
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 185/333 (55%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G V GP + +PI + +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVEVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASYMI GG K++ Q + F Y+ + L++ L ++A YLIAQ
Sbjct: 136 G-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQ 194
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA ++L+
Sbjct: 195 INAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLEE 254
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLG 313
+ + + +G+DW ++ A + +QGNLDP L+ + + + N IL VL
Sbjct: 255 WETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPEKCLKEA-NRILQEGVLE 312
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
G +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 313 PG-YIFNLGHGVFPEVPPEMLKQLTNYIHERSE 344
>gi|302866121|ref|YP_003834758.1| uroporphyrinogen decarboxylase [Micromonospora aurantiaca ATCC
27029]
gi|302568980|gb|ADL45182.1| uroporphyrinogen decarboxylase [Micromonospora aurantiaca ATCC
27029]
Length = 380
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+RR+ DAAILFSDI+V
Sbjct: 55 PVWFMRQAGRSLPEYREIRANVP-MLESCRRPDLVTEITLQPVRRHGVDAAILFSDIVVP 113
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V GP + +P+ T ++ + P ++++ + + + P
Sbjct: 114 VAAAGIDLDIVPGTGPVVAEPVRTAADVERITPIGRDDVSFVDEAVRRLVVELGDTP--- 170
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + + Y + ++ L L++V+ +L QI A
Sbjct: 171 -LIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCARLAEVTLAFLQVQIDA 229
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L E ++ + ++ + I F G G +L
Sbjct: 230 GVSAVQLFDSWAGALSEADYRRFVLPHSTYVLGGLADA--GVPRIHFGVGTGELLGAMGE 287
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
++ +G+DW PL A + + VQGNLDP L+ G V+ V I++ + P
Sbjct: 288 -AGADVVGVDWRTPLDVATGRIGPDKAVQGNLDPTVLLAGWPVVETEVRRIVEQGRAAPG 346
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P+ DP+ + +V V
Sbjct: 347 HVFNLGHGVLPETDPEVLTRVVALV 371
>gi|291436574|ref|ZP_06575964.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
gi|291339469|gb|EFE66425.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
Length = 356
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYRKVREGI-GMLDSCMRPELVAEITLQPVRRHRVDAAIFFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ P+ T+ ++ L DL + + ++I +L +L
Sbjct: 93 LKAIGIDLDIKPGIGPVVEQPVRTRADLARLR---DLTPEDVSYVTEAIGLLLPEL-GST 148
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + + + Y + + LLD L+D++A +L QI A
Sbjct: 149 PLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDRLADITAAFLKVQIEA 208
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L ++ + ++ V I F G G +L
Sbjct: 209 GVSAVQLFDSWAGALAPADYRRSVLSASAKVFREVADH--GVPRIHFGVGTGELL-GLMG 265
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + +L+ G
Sbjct: 266 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPTVLFAGREAVEAKAQEVLESAAGL 323
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P + + LV+ V +
Sbjct: 324 EGHIFNLGHGVMPSTEADALTHLVEYVHT 352
>gi|308177935|ref|YP_003917341.1| uroporphyrinogen decarboxylase [Arthrobacter arilaitensis Re117]
gi|307745398|emb|CBT76370.1| uroporphyrinogen decarboxylase [Arthrobacter arilaitensis Re117]
Length = 351
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 181/346 (52%), Gaps = 16/346 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +++ L G + P+W MRQAGR LPEY ++R+ + LD C P E+TLQP+
Sbjct: 15 QDSALIQALTGKKPSHHPVWFMRQAGRSLPEYLKLREGV-SMLDSCLDPAMASEITLQPV 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR+ DA I FSDI++ G V V GP +D PI T E P +L L P
Sbjct: 74 RRHKVDAGIFFSDIVIPLRLAGIGVDIVPGVGPVLDTPIRTAEQVAALP--ELTDEALEP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I +++ + +L LIGF GAP+TVA+YM+ G +DH R + + ++ L+
Sbjct: 132 IREAVRLTVAEL-GSTPLIGFAGAPFTVAAYMVEGKPSRDHLGPRTMMHTDPEVWDGLMS 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ ++ S ++L AQ+ AG Q+FD+ AG L +++ + A + + VR
Sbjct: 191 WAANASGKFLRAQVEAGASASQLFDSWAGSLSLPDYQKFVAPYSVKSLDDVRDL--GVPL 248
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L R + +G+D+ +PL A+E L ++ VQGN+DP L +V+
Sbjct: 249 IHFGTGTGELLTAMRD-AGVDTVGVDYRIPLETAIERLGQDVSVQGNIDPALLAAPWEVL 307
Query: 302 IDGVNAILDVLGSGP----FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +V+ +G + NLGHG+ P DP + +V+ + S
Sbjct: 308 EAHVR---EVVAAGKNARGHVVNLGHGVPPTTDPTVLTRVVELIHS 350
>gi|255639814|gb|ACU20200.1| unknown [Glycine max]
Length = 387
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/347 (32%), Positives = 189/347 (54%), Gaps = 21/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQP +
Sbjct: 49 LLNAVRGIDVERPPVWLMRQAGRYMKSYQTICEKYPSFRERSENVDLVVEISLQPWHVFK 108
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL----LP 122
D ILFSDIL + V+ +GP + DPI T +D ++ +P
Sbjct: 109 PDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHTAA------QVDQVREFIPEESVP 162
Query: 123 -IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+ S+ + LL
Sbjct: 163 YVGEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKNFSKIKRLAFSESKILHSLL 222
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ A Y+ Q G +QIFD+ A L +FE ++ + +II V++ +PN
Sbjct: 223 QKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIIDTVKKSHPNLP 282
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGN 298
I +A G+G +L+ LT + + LDW+V + A ++ GP VQGN+DP L
Sbjct: 283 LILYASGSGGLLERLA-LTGVDVVSLDWTVDM--ADGRRRLGPNIAVQGNVDPGVLFGSK 339
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + D +N + G G I NLGHGI TP+ + + ++ K++R
Sbjct: 340 EFITDRINDTVRKAGRGKHILNLGHGIKVGTPEENVAHFFEVAKSIR 386
>gi|297531143|ref|YP_003672418.1| uroporphyrinogen decarboxylase [Geobacillus sp. C56-T3]
gi|297254395|gb|ADI27841.1| uroporphyrinogen decarboxylase [Geobacillus sp. C56-T3]
Length = 345
Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 184/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ +
Sbjct: 69 DAAILYKDIMTPLPAIGVDVEIQGGVGPVIANPIRSLQDVERLGEIDPEHDVPY-----V 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLT 335
>gi|124025350|ref|YP_001014466.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL1A]
gi|166234268|sp|A2C141|DCUP_PROM1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123960418|gb|ABM75201.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. NATL1A]
Length = 352
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 185/343 (53%), Gaps = 18/343 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNE +L +G + PP+W+MRQAGRY+ YR +R +F + P+ + E+++
Sbjct: 1 MNETTPLLLRAARGEHVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G N VE++GP + DPI + +++ L P +
Sbjct: 61 QPFTAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 121 SF-----VGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA ++++ V+
Sbjct: 176 LLHQLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKE 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
K+P+ I + G+ +L+ + T + + LDW+V ++ L+ L + VQGN+DP L
Sbjct: 236 KHPDTPMILYISGSAGVLERMGQ-TGVDIVSLDWTVDMADGLKRLPQSVGVQGNVDP-GL 293
Query: 295 VVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
+ G I + I+DV+ I NLGHGI P +N
Sbjct: 294 LFGTPDAIR--SRIVDVVKKAKGRKHILNLGHGILPGTPEENA 334
>gi|302554898|ref|ZP_07307240.1| uroporphyrinogen decarboxylase [Streptomyces viridochromogenes DSM
40736]
gi|302472516|gb|EFL35609.1| uroporphyrinogen decarboxylase [Streptomyces viridochromogenes DSM
40736]
Length = 355
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 175/328 (53%), Gaps = 14/328 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+RR+N DAAI FSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYRKVREGIP-MLESCMRPELVTEITLQPVRRHNVDAAIYFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G ++ GP ++ PI ++E L DL + + ++I +L ++L
Sbjct: 92 LKAIGVDLDIKPGVGPVVERPIRSRED--LAQLRDLTPEDVSYVTEAIGLLTREL-GATP 148
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG + + + Y + + LLD L+ ++A +L QI AG
Sbjct: 149 LIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDRLAGITAAFLKVQIEAG 208
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+Q+FD+ AG L ++ + ++ AV I F G G +L
Sbjct: 209 ASAVQLFDSWAGALAPVDYRRSVLPASAKVFDAVAGY--GVPRIHFGVGTGELLPLMGE- 265
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGS-G 315
++ +G+DW VP+ A ++ GP +QGNLDP L + + +LD
Sbjct: 266 AGADVVGVDWRVPMDEA--ARRVGPGKALQGNLDPTVLFAPTEAVEAKTQEVLDAAADLE 323
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHG+ P DP + LV+ V +
Sbjct: 324 GHVFNLGHGVMPATDPDALTRLVEYVHT 351
>gi|331696708|ref|YP_004332947.1| uroporphyrinogen decarboxylase [Pseudonocardia dioxanivorans
CB1190]
gi|326951397|gb|AEA25094.1| Uroporphyrinogen decarboxylase [Pseudonocardia dioxanivorans
CB1190]
Length = 356
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 171/330 (51%), Gaps = 19/330 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + C PE T E+T+QP+RR+ DAAILFSDI+V
Sbjct: 35 PVWFMRQAGRSLPEYRALRAD-TGIIQACLDPELTCEITMQPVRRHGVDAAILFSDIVVP 93
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP + P+ T P L + P+ +I +L L
Sbjct: 94 LYLSGVGVDIVAGTGPVVARPVRTAADVEALPR--LHPEQVAPVVDAIRLLLPAL-GETP 150
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG ++H + + ++ LL L+ +A +L AQ+ AG
Sbjct: 151 LIGFAGAPFTLASYLVEGGPSRNHERTKALMRSAPDVWHALLSRLAANAATFLQAQVDAG 210
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +Q+FD+ AG L E ++ Y ++ + I F G G +L +
Sbjct: 211 VDAVQLFDSWAGALSERDYRRYVMPHSAAVLEPLAGS--GIPRIHFGVGTGELLGA---M 265
Query: 260 TDSNA--IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG--S 314
D+ A IG+DW VPL A+ VQGNLDP ++ + V I+ + G +
Sbjct: 266 ADAGADVIGVDWRVPLDEAVRRTGGRHAVQGNLDPA-VLFADPVSIEAEVRRIAAEGRAA 324
Query: 315 GPFIFNLGHGITPQVDP---KNVLDLVKTV 341
+FNLGHG+ P+ DP V+DLV T+
Sbjct: 325 SGHVFNLGHGVLPETDPDVVTRVVDLVHTL 354
>gi|219115715|ref|XP_002178653.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217410388|gb|EEC50318.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 409
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 181/346 (52%), Gaps = 14/346 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G P+W+MRQAGR++ EYR + KK+ F + PE VE++LQP R Y
Sbjct: 61 LIRAARGEKTERTPVWMMRQAGRHIAEYRDLCKKYPTFRERSEIPEVAVEVSLQPWRNYQ 120
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL +G E GP M+P+ + +I ++P +D + + + ++
Sbjct: 121 TDGCILFSDILTPLPGIGCEFTIDEKVGPLMEPMRSYDDIKKMHP-MDPYKSTPF-VAEA 178
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ LR+++ ++GF G P+T+A+Y++ G K++ + + A + +L L+D
Sbjct: 179 LKALRQEVGPETAVLGFVGCPYTLATYIVEGKTSKEYLEIKKMALNEPDLLHAILQQLAD 238
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+Y + QI G +IQIFD+ AG L ++ +AA +I+ ++ KYP+ + +
Sbjct: 239 NIGDYALFQIENGAQLIQIFDSWAGHLSPRDYNTFAAPYQKQILDKIKEKYPDVPTVIYI 298
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----------LQKEGPVQGNLDPMRLVV 296
K +G +++ T + + LDW+V ++ + L+ G VQGNLDP L
Sbjct: 299 KHSGALIERM-AATGVDVVSLDWTVDMADGRDRIEAGRKSAGLEGRGGVQGNLDPAVLFA 357
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ + IL GS + NLGHGI +N ++TVR
Sbjct: 358 NHDVIEERAIEILKKAGSVGHVMNLGHGIEAATPEENAHHFIETVR 403
>gi|229183377|ref|ZP_04310604.1| Uroporphyrinogen decarboxylase [Bacillus cereus BGSC 6E1]
gi|228600093|gb|EEK57686.1| Uroporphyrinogen decarboxylase [Bacillus cereus BGSC 6E1]
Length = 328
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 180/329 (54%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G +V GP +D PI + +++ +NP D+ I +I +L ++
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEML 115
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQ
Sbjct: 116 D-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQ 174
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I+AG +QIFD+ G + ++ + ++ RI + VR I GA +++
Sbjct: 175 INAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTL--GVPMIMHGVGAAHLVNE 232
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ L + +GLDW +P+ A VQGN+DP L+ V+ + V ILD
Sbjct: 233 WHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQ 291
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P +IFNLGHG+ P+V+P + L +
Sbjct: 292 PGYIFNLGHGVFPEVNPDTLKRLTTFIHE 320
>gi|239928245|ref|ZP_04685198.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
Length = 346
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 24 PVWFMRQAGRSLPEYRKVREGI-GMLDSCMRPELVAEITLQPVRRHRVDAAIFFSDIVVP 82
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ P+ T+ ++ L DL + + ++I +L +L
Sbjct: 83 LKAIGIDLDIKPGIGPVVEQPVRTRADLARLR---DLTPEDVSYVTEAIGLLLPEL-GST 138
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + + + Y + + LLD L+D++A +L QI A
Sbjct: 139 PLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDRLADITAAFLKVQIEA 198
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L ++ + ++ V I F G G +L
Sbjct: 199 GVSAVQLFDSWAGALAPADYRRSVLSASAKVFREVADH--GVPRIHFGVGTGELL-GLMG 255
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + +L+ G
Sbjct: 256 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPTVLFAGREAVEAKAQEVLESAAGL 313
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P + + LV+ V +
Sbjct: 314 EGHIFNLGHGVMPSTEADALTHLVEYVHT 342
>gi|78184493|ref|YP_376928.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9902]
gi|123581675|sp|Q3AYE3|DCUP_SYNS9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78168787|gb|ABB25884.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9902]
Length = 352
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + E + LNP +
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LRK + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHTLLNHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ F+ + G+ +L+ R T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 236 THPDTPFVLYISGSAGVLERMAR-TGVDIISLDWTVDMAEACARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + I NLGHGI P +N ++ +S
Sbjct: 295 FGTPDAIQARIDDTVRKARGRRHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|326507992|dbj|BAJ86739.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 182 bits (463), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 180/332 (54%), Gaps = 8/332 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP + D ILFSDIL
Sbjct: 62 PPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPWHAFAPDGVILFSDILT 121
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G E++GP + P+ T+E IDL + L + +S+ ILR ++
Sbjct: 122 PLPAIGVPFDISESKGPVIQSPVRTEEQVRELVPIDL--DKLQFVGESLKILRSEIDGKA 179
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L++ ++Y+I Q+++
Sbjct: 180 ALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLSHLAEAISDYIIYQVNS 239
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQIFD+ G L H +E ++ + +I++ ++ + P+ + + G G +L+ +
Sbjct: 240 GAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTECPHIPLVLYINGNGGLLERMKD 299
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + IGLDW+V ++ +G VQGN+DP L V+ D ++ ++ G
Sbjct: 300 I-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVLTDEIHRVVKSAGPKGH 358
Query: 318 IFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 359 ILNLGHGVFQQTPEEAVAHFFDVTRSLRYDTL 390
>gi|171769482|sp|A7GM02|DCUP_BACCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 348
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACKGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP ++ PI + +++ ++P D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIENPIRSMQDVEKLGEIHPEEDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L
Sbjct: 123 --ILDTIRLLTAEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D LSD+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR N
Sbjct: 180 MDKLSDMVIAYLKAQIQAGAKAVQVFDSWVGTVNVADYRIFIKPAMERIFAQVREM--NV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GAG++ + L + +GLDW + + A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAGHLANEWNDLP-LDVVGLDWRLSIEEARTRGIHKAVQGNMDPSLLLAPWNV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P ++FNLGHG+ P+V+P + L
Sbjct: 297 IEEHVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLT 335
>gi|326493868|dbj|BAJ85396.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499676|dbj|BAJ86149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 181/332 (54%), Gaps = 8/332 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP + D ILFSDIL
Sbjct: 62 PPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPWHAFAPDGVILFSDILT 121
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G E++GP + P+ T+E + + + L+ L + +S+ ILR ++
Sbjct: 122 PLPAIGVPFDISESKGPVIQSPVRTEE--QVRELVPIDLDKLQFVGESLKILRSEIDGKA 179
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L++ ++Y+I Q+++
Sbjct: 180 ALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLSHLAEAISDYIIYQVNS 239
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQIFD+ G L H +E ++ + +I++ ++ + P+ + + G G +L+ +
Sbjct: 240 GAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTECPHIPLVLYINGNGGLLERMKD 299
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + IGLDW+V ++ +G VQGN+DP L V+ D ++ ++ G
Sbjct: 300 I-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVLTDEIHRVVKSAGPKGH 358
Query: 318 IFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 359 ILNLGHGVLQQTPEEAVAHFFDVTRSLRYDTL 390
>gi|152974638|ref|YP_001374155.1| uroporphyrinogen decarboxylase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023390|gb|ABS21160.1| uroporphyrinogen decarboxylase [Bacillus cytotoxicus NVH 391-98]
Length = 357
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/339 (33%), Positives = 185/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G + P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 16 ETFLKACKGERTDYVPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 74
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP ++ PI + +++ ++P D+
Sbjct: 75 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIENPIRSMQDVEKLGEIHPEEDVPY--- 131
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L
Sbjct: 132 --ILDTIRLLTAEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFAL 188
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D LSD+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR N
Sbjct: 189 MDKLSDMVIAYLKAQIQAGAKAVQVFDSWVGTVNVADYRIFIKPAMERIFAQVREM--NV 246
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GAG++ + L + +GLDW + + A VQGN+DP L+ V
Sbjct: 247 PMIMHGVGAGHLANEWNDLP-LDVVGLDWRLSIEEARTRGIHKAVQGNMDPSLLLAPWNV 305
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P ++FNLGHG+ P+V+P + L
Sbjct: 306 IEEHVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLT 344
>gi|260434883|ref|ZP_05788853.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8109]
gi|260412757|gb|EEX06053.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8109]
Length = 352
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 184/339 (54%), Gaps = 12/339 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + + ++ LNP +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVDALHPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 ILHKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +++ T + + LDW+V ++ AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVIERMAN-TGVDIVSLDWTVDMAEALARLPEHVGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ + ++ + I NLGHGI P +N
Sbjct: 295 FGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEEN 333
>gi|120403471|ref|YP_953300.1| uroporphyrinogen decarboxylase [Mycobacterium vanbaalenii PYR-1]
gi|166234261|sp|A1T7Z4|DCUP_MYCVP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119956289|gb|ABM13294.1| uroporphyrinogen decarboxylase [Mycobacterium vanbaalenii PYR-1]
Length = 354
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/336 (33%), Positives = 177/336 (52%), Gaps = 24/336 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGR LPEYR +R K + C+ + E+TLQP+RR+ DAAILFSDI+V
Sbjct: 25 PVWMMRQAGRSLPEYRALRAK-NTMMQACFDADLITEITLQPVRRHGVDAAILFSDIVVP 83
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + P+ T ++ + P L + + P+ +I L +L +
Sbjct: 84 LRAAGIDLDIVPDVGPVIAQPVRTADDVAAIRP---LEPSRVDPVATAIGRLVGEL-GDV 139
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + + ++ L+ L+D++ +L AQ+ A
Sbjct: 140 PLIGFAGAPFTLASYLVEGGPSRNHERTKAMMLGETATWHALMTALTDITIAFLRAQVDA 199
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GVD IQ+FD+ AG L ++ Y R+ +++ F G +L
Sbjct: 200 GVDAIQVFDSWAGTLSLADYRTYVLPHSARVFASLAGA--GVPMTHFGVGTAELLGAMSE 257
Query: 259 LTDSNA----IGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVG--------NQVMIDGV 305
+ +G+DW L+ A + G +QGNLDP+ L+ G V+ DG
Sbjct: 258 AVTGHGVPAMVGVDWRTSLTDAAARVRPGTALQGNLDPVVLLAGWPVVERAVRAVVEDGR 317
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
A+ G+ +FNLGHG+ P DP + D V V
Sbjct: 318 RAV--DAGAVGHVFNLGHGVLPATDPAVITDTVALV 351
>gi|116070841|ref|ZP_01468110.1| uroporphyrinogen decarboxylase [Synechococcus sp. BL107]
gi|116066246|gb|EAU72003.1| uroporphyrinogen decarboxylase [Synechococcus sp. BL107]
Length = 352
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 182/339 (53%), Gaps = 12/339 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + E + LNP +
Sbjct: 61 QPFEAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LRK + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHTLLNHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ F+ + G+ +L+ R T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 236 THPDTPFVLYISGSAGVLERMAR-TGVDIISLDWTVDMAEACARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ ++ + I NLGHGI P +N
Sbjct: 295 FGTPDAIQARIDDTVRKARGRRHILNLGHGILPGTPEEN 333
>gi|154685469|ref|YP_001420630.1| uroporphyrinogen decarboxylase [Bacillus amyloliquefaciens FZB42]
gi|171854999|sp|A7Z323|DCUP_BACA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|154351320|gb|ABS73399.1| HemE [Bacillus amyloliquefaciens FZB42]
Length = 353
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 186/341 (54%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G N P+W MRQAGR PEYR++++K+ +++ + PE +T P+ +Y
Sbjct: 12 LKAARGEKTNHVPVWYMRQAGRSQPEYRKLKEKY-GLVEITHQPELCAYVTRLPVEQYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP +D P+ + +++ LNP D+ Y+L
Sbjct: 71 DAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIEKLGELNPEQDV--PYVL-- 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F + +A+ L+D
Sbjct: 127 -ETIRLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHSMPQAWKMLMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ Y AQI+AG IQIFD+ G L ++ + + RI + + I
Sbjct: 185 LADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRQFIKPVMDRIFRELSAE--QVPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ ++ L + +GLDW + + A + VQGNLDP L+ +V+
Sbjct: 243 MFGVGASHLAGDWHDLP-LDVVGLDWRLGIDDARKQGITKTVQGNLDPSLLLAPWEVIEK 301
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + + FIFNLGHG+ P V+P+ + L V
Sbjct: 302 KAKAILDQGMKTDGFIFNLGHGVFPDVNPETLKKLTAFVHE 342
>gi|296131258|ref|YP_003638508.1| uroporphyrinogen decarboxylase [Cellulomonas flavigena DSM 20109]
gi|296023073|gb|ADG76309.1| uroporphyrinogen decarboxylase [Cellulomonas flavigena DSM 20109]
Length = 354
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 171/327 (52%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR R LD C P+ E+TLQP+RR+ DAA+ FSDI+V
Sbjct: 32 PVWFMRQAGRSLPEYRASRAG-TAMLDACLDPDLASEITLQPVRRHGVDAAVFFSDIVVP 90
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G +V V GP + P+ T ++ L L L P+ + +L +
Sbjct: 91 LRLVGVDVEIVPGTGPVIGTPVRTLDDVARLRDLGPLDAERLAPVAAGVERTVAQL-DRT 149
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAP+T+A+Y++ GG +DH R + + A+ L+D+ ++V+ ++ AQ+ A
Sbjct: 150 PLVGFAGAPFTLAAYLVEGGPSRDHLAARRLMHADPAAWAALMDWTAEVTGAFVAAQVTA 209
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G Q+FD+ AG L ++ + A + R+++ R + F G +L R
Sbjct: 210 GASAAQLFDSWAGALSLADYTTHCAPASARVLAQARAL--GVPTVHFGVATGELLVAMRD 267
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
++ +G+D+ VPL A G P+QGN+DP L V+ V ++ + P
Sbjct: 268 -AGADVMGVDYRVPLDEASRRLGGGTPLQGNVDPALLAAPWDVLEAHVRDVVRRGAAAPA 326
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P+ DP + LV+ V S
Sbjct: 327 HVVNLGHGVPPETDPTVLTRLVQLVHS 353
>gi|114556196|ref|XP_001154766.1| PREDICTED: uroporphyrinogen decarboxylase isoform 7 [Pan
troglodytes]
Length = 346
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 172/345 (49%), Gaps = 30/345 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ ++ + ++ + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA---RSVGRIISAVRRKYPN 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A R+
Sbjct: 173 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 232
Query: 240 A--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
A I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 233 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 291
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 292 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 336
>gi|72381859|ref|YP_291214.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL2A]
gi|123773819|sp|Q46LW7|DCUP_PROMT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72001709|gb|AAZ57511.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL2A]
Length = 352
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 186/343 (54%), Gaps = 18/343 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNE +L +G + PP+W+MRQAGRY+ YR +R +F + P+ + E+++
Sbjct: 1 MNETTPLLLRAARGENVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + + D ILFSDIL +G N VE++GP + DPI + +++ L P +
Sbjct: 61 QPFKAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPEESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 121 SF-----VGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA ++++ V+
Sbjct: 176 LLHQLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKE 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
K+P+ I + G+ +++ + T + + LDW+V ++ L+ L + VQGN+DP L
Sbjct: 236 KHPDTPMILYISGSAGVIERMGQ-TGVDIVSLDWTVDMADGLKRLPQAVGVQGNVDP-GL 293
Query: 295 VVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNV 334
+ G I + I+DV+ I NLGHGI P +N
Sbjct: 294 LFGTPDAIR--SRIVDVVRKAKGRKHILNLGHGILPGTPEENA 334
>gi|87308937|ref|ZP_01091075.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
gi|87288280|gb|EAQ80176.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
Length = 645
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 19/329 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRY+ EYR++R K FL++C P+ E+ + + DAAI+FSD+L I
Sbjct: 321 PIWMMRQAGRYMAEYREVRAK-TTFLELCKNPQLCSEVMCTAVTKLGVDAAIIFSDLLPI 379
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY-----LLPIFQSISILRKKL 134
+ +G ++ + + EGP + +P+ + ++D L L + +++ R +
Sbjct: 380 LEPMGLDLEYAQGEGPVIHNPVRE------SADVDRVLELESAESLHYVMETVRQTRADM 433
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
P HI +IGF GAP+T+ASY I GG + + + Y++ A+ L++ L YL A
Sbjct: 434 PEHIPVIGFAGAPFTLASYAIEGGASRTYLHTKTLMYRDPDAWRALMERLVRAITVYLNA 493
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
QI AG +QIFD+ AGCL ++ Y + II + P I+FA G +L
Sbjct: 494 QIAAGAQCVQIFDSWAGCLSPADYRRYLLPHMKEIIGGI---TPGTPIINFATGNPALLP 550
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ +G+DW + L+ A E VQGNLDP+ L+ + +LD
Sbjct: 551 LLAEAGPA-VVGVDWRIGLADAWNTIGENFAVQGNLDPVTLLADPIEIRRRAKEVLDQAA 609
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P IFNLGHGI Q N + LV V
Sbjct: 610 GRPGHIFNLGHGILQQTPVDNAIALVDMV 638
>gi|33866029|ref|NP_897588.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8102]
gi|45476851|sp|Q7U645|DCUP_SYNPX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33639004|emb|CAE08010.1| Uroporphyrinogen decarboxylase (URO-D) [Synechococcus sp. WH 8102]
Length = 352
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + + + LNP+ +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVNALRPLNPSESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 LLHKLLDHFAESIANYLRFQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +L+ T + I LDW+V + AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVLERM-ATTGVDIISLDWTVDMGEALARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + I NLGHGI P +N ++ +S
Sbjct: 295 FGTPDAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|269958018|ref|YP_003327807.1| uroporphyrinogen decarboxylase [Xylanimonas cellulosilytica DSM
15894]
gi|269306699|gb|ACZ32249.1| uroporphyrinogen decarboxylase [Xylanimonas cellulosilytica DSM
15894]
Length = 378
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 180/352 (51%), Gaps = 22/352 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+G+ P+W MRQAGR LPEYR++R+ LD C P E+TLQP+R
Sbjct: 35 ASPLVRALRGDRPERLPVWFMRQAGRSLPEYREVRRGHA-MLDSCLNPPLATEITLQPVR 93
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL--- 121
R+ DAAI FSDI+V G V V GP MD + Y ++D ++ L
Sbjct: 94 RHGVDAAIFFSDIVVPLRLAGVAVDIVPGVGPVMD-----QPYRTPSDVDRLVSTALDDE 148
Query: 122 ---PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
PI +++++ +L LIGF GAP+T+A+Y++ G +DH R + + + ++
Sbjct: 149 ALAPIREAVALTVAQL-GGTPLIGFGGAPFTLAAYLVEGRPSRDHLAARTLMHADPQTWD 207
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ + + ++ ++L Q+ AG +Q+FD+ AG L ++ A S R ++AV
Sbjct: 208 RLVTWTASLTGDFLRTQVLAGASAVQLFDSWAGSLSLADYTARVAPSSARALAAVADL-- 265
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAI-----GLDWSVPLSFALELQKEGP-VQGNLDPM 292
I F G ++L R + S I G+D+ PL AL + G +QGNLDP
Sbjct: 266 GVPGIHFGTGTAHLLPAMRDVLTSAGIADRTVGVDYRTPLDEALGMIGAGVNLQGNLDPA 325
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L +V+ V ++ P + NLGHG+ P+ DP + +V+ V S
Sbjct: 326 LLAAPWEVLEAHVRDVVARGAEAPGHVVNLGHGVPPETDPTVLTRVVELVHS 377
>gi|254416278|ref|ZP_05030032.1| uroporphyrinogen decarboxylase [Microcoleus chthonoplastes PCC
7420]
gi|196176960|gb|EDX71970.1| uroporphyrinogen decarboxylase [Microcoleus chthonoplastes PCC
7420]
Length = 353
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 182/338 (53%), Gaps = 7/338 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+W+MRQAGRY+ YR +R K+ +F + PE +E++LQP + +
Sbjct: 10 LLRAARGEKLERPPVWMMRQAGRYMKAYRDLRDKYPSFRERSEIPEIAIEISLQPWKAFR 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL +G VE++GP +D PI +Q +I L+P L L L + +
Sbjct: 70 PDGVILFSDILTPLPGVGIPFDIVESKGPIIDPPIRSQAQIDGLHP---LELEKLTFVGE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ LR+++ N ++GF GAPWT+A+Y I G K++ + A+ + L ++
Sbjct: 127 ILQALRQEVGNEAAVLGFVGAPWTLAAYAIEGKSSKNYSIIKGMAFSQPAMLHEFLGKIA 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A Y+ QI G V+Q+FD+ AG L +++ +A R++ V+ +P+ I +
Sbjct: 187 DAIAVYVRYQIDNGAQVVQLFDSWAGQLSPQDYDTFALPYQQRVVEQVKATHPDTPLILY 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G+ +L+ + + + I +DW+V ++ A + L + VQGN+DP L + D
Sbjct: 247 ISGSAGILERMGK-SGVDIISVDWTVDMAEARQRLGYKMNVQGNMDPGVLFGSQDFIRDR 305
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ IFNLGHG+ P NV +T +
Sbjct: 306 ILDTIRKAGNRGHIFNLGHGVLPGTPEDNVRFFFETAK 343
>gi|68477717|ref|XP_717171.1| hypothetical protein CaO19.5369 [Candida albicans SC5314]
gi|68477880|ref|XP_717092.1| hypothetical protein CaO19.12829 [Candida albicans SC5314]
gi|46438790|gb|EAK98116.1| hypothetical protein CaO19.12829 [Candida albicans SC5314]
gi|46438872|gb|EAK98197.1| hypothetical protein CaO19.5369 [Candida albicans SC5314]
Length = 361
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 185/343 (53%), Gaps = 23/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY +++ ++F + C E E+T+QP+ ++
Sbjct: 12 ILRAAKGEKVERPPIWIMRQAGRYLPEYHKVKGN-RDFFETCQDAEIASEITIQPVDHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNYLL 121
DAAI+FSDILVI A+G + VE +GP P+ T + L P+++ L +
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFAAPLRTPDDLSRIDLKPDVNTKLAW-- 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + LL
Sbjct: 129 -AYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D E+L Q+ AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 188 QATCDACVEFLAQQVVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKELG 247
Query: 240 -AKFIS---FAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLDP 291
++I FAKGA Y L + L DS + + LDW A+++ + +QGNLDP
Sbjct: 248 VEEYIPMTVFAKGAWYALDD---LCDSGYDCVSLDWLYDPKNAVKVVNGRRITLQGNLDP 304
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++V+ V +L+ G +I N GHG P +DPK +
Sbjct: 305 GVMYGSDKVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKI 347
>gi|188997009|ref|YP_001931260.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932076|gb|ACD66706.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 348
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/352 (34%), Positives = 180/352 (51%), Gaps = 22/352 (6%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + L + + PIWLMRQAGRY+ EYRQ+R+ +F + + V+ ++
Sbjct: 3 NPKNDLFLRACRRQKVERTPIWLMRQAGRYMKEYRQLREIAGSFKNYYKNVDLAVKASIL 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE----IYLLNPNIDLF 116
P DA I+FSDIL +++G F E EGP + PI +E + N F
Sbjct: 63 PYTLLGVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKGKEDIQSLKEFNAEDVYF 122
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + I + + + I +IGF GAP+T+A+YMI G KD + + F Y N
Sbjct: 123 VGEI------IKGVNQTINREIPVIGFAGAPFTIAAYMIEGRGSKDFKKTKSFMYNNQED 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
F LLD ++D++ +YL QI +G D +QIFD+ AG L +++ + SV ++I + K
Sbjct: 177 FKILLDKIADMTIKYLSFQIESGADAVQIFDSWAGHLSPKDYKEFVLPSVKKVIENL--K 234
Query: 237 YPNAKFISFAKG-AGYMLKNYRRLTDSNA--IGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+ N I F KG G+M + DSNA +DW + + A +L + VQGNLDPM
Sbjct: 235 HYNKPIIHFTKGVCGFM----DFILDSNADVYSIDWMIDIKKAKDLIYPKASVQGNLDPM 290
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L ++ I+ G IFNLGHG+ P +D V LV TV+
Sbjct: 291 VLYADKDIIKKEAEYIIKSWGEDTGHIFNLGHGLMPDMDASKVKFLVDTVKE 342
>gi|145594079|ref|YP_001158376.1| uroporphyrinogen decarboxylase [Salinispora tropica CNB-440]
gi|189083019|sp|A4X548|DCUP_SALTO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145303416|gb|ABP53998.1| uroporphyrinogen decarboxylase [Salinispora tropica CNB-440]
Length = 371
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR L+ C PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 44 PVWFMRQAGRSLPEYRKIRASVA-MLESCRRPELITEITLQPVRRHGVDAAILFSDIVVP 102
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G + V GP + DP+TT ++ + P + Y + +++ +L +L
Sbjct: 103 VAAAGVALDIVPGTGPVVNDPVTTAADVDRIRPISREDVPY---VDEAVRMLVGEL-GAT 158
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG ++H + + Y + ++ L L++V+ +L QI A
Sbjct: 159 PLIGFAGAPFTLASYLIEGGPSRNHTKTKALMYGDPDLWHALASRLAEVTLAFLKVQIDA 218
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
GV +Q+FD+ AG L E ++ Y +++ + I F G G +L
Sbjct: 219 GVSAVQLFDSWAGALSEADYRRYVQPHSQAVLAGLADA--GVPRIHFGVGTGELLAAMGE 276
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
++ +G+DW PL A + E VQGNLDP L V+ V +L + P
Sbjct: 277 -AGADVVGVDWRTPLDVATRRVGSERAVQGNLDPCLLFAPWPVIEAEVRRVLAQGRAAPG 335
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P+ DP + +V +
Sbjct: 336 HIFNLGHGVLPETDPDVLTRVVALI 360
>gi|325092952|gb|EGC46262.1| uroporphyrinogen decarboxylase [Ajellomyces capsulatus H88]
Length = 323
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 166/299 (55%), Gaps = 20/299 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPIERYV 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P Q +L+ N+D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPLKSPDDPQYRQILDKNVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYRYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +++ + I + + ++
Sbjct: 189 ALLQKIAEICVEYLALQVVAGSQLVQVFDSWAGELSPASFADFSLPYLRYISANLPKRLA 248
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDP 291
FAKGA Y L + + + +GLDW A+ + + +QGN DP
Sbjct: 249 ELGQEAVPMTVFAKGAWYALDSLCG-SGYDVVGLDWLHDPVEAMNIARGRVTLQGNADP 306
>gi|229084164|ref|ZP_04216453.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-44]
gi|228699200|gb|EEL51896.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-44]
Length = 335
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 16/320 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 9 PAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 67
Query: 81 ADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G +V GP +D PI + +++ ++P D+ I +I +L ++
Sbjct: 68 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEIHPEDDVPY-----ILDTIRLLTTEML 122
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L+D L+D+ YL AQ
Sbjct: 123 D-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFALMDKLADMVITYLKAQ 181
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG +Q+FD+ G L ++ + ++ RI + VR N I GAG++
Sbjct: 182 IKAGAKAVQVFDSWVGTLNVADYRVFIKPAMERIFAEVRAM--NVPMIMHGVGAGHLANE 239
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ L + +GLDW + + A VQGN+DP L+ V+ + V ILD
Sbjct: 240 WNNLP-LDVVGLDWRLSIEEARGRGIHKAVQGNMDPSFLLAPWDVIEEHVKGILDQGMKQ 298
Query: 316 P-FIFNLGHGITPQVDPKNV 334
P ++FNLGHG+ P+V+P +
Sbjct: 299 PGYVFNLGHGVFPEVNPDTL 318
>gi|326490599|dbj|BAJ89967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 179/332 (53%), Gaps = 8/332 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP + D ILFSDIL
Sbjct: 62 PPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPWHAFAPDGVILFSDILT 121
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G E++GP + P+ T+E IDL + L + +S+ ILR ++
Sbjct: 122 PLPAIGVPFDISESKGPVIQSPVRTEEQVRGLVPIDL--DKLQFVGESLKILRSEIDGKA 179
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L++ ++Y+I Q+++
Sbjct: 180 ALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLSHLAEAISDYIIYQVNS 239
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQIFD+ G L H +E ++ + +I++ ++ P+ + + G G +L+ +
Sbjct: 240 GAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTGCPHIPLVLYINGNGGLLERMKD 299
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + IGLDW+V ++ +G VQGN+DP L V+ D ++ ++ G
Sbjct: 300 I-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVLTDEIHRVVKSAGPKGH 358
Query: 318 IFNLGHGI---TPQVDPKNVLDLVKTVRSEKI 346
I NLGHG+ TP+ + D+ +++R + +
Sbjct: 359 ILNLGHGVLQQTPEEAVAHFFDVTRSLRYDTL 390
>gi|271967977|ref|YP_003342173.1| uroporphyrinogen decarboxylase [Streptosporangium roseum DSM 43021]
gi|270511152|gb|ACZ89430.1| Uroporphyrinogen decarboxylase [Streptosporangium roseum DSM 43021]
Length = 345
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 172/330 (52%), Gaps = 22/330 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + L C TPE VE+T+QP+RRY DAAI FSDI+V
Sbjct: 23 PVWFMRQAGRSLPEYRAVRGEVP-MLTACATPELIVEITMQPVRRYGVDAAIFFSDIVVP 81
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI I L P ++Y + +++ L +L
Sbjct: 82 LKAIGIDLDIKPGVGPVVAEPIRDAAAIETLRPIEPGDVSY---VTEAVRALTGEL-GPT 137
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG K+H + Y R ++ +++ L+ ++ E+L QI A
Sbjct: 138 PLIGFAGAPFTLASYLIEGGPSKNHDHTKAMMYGEPRLWHAMMERLTGITLEFLRIQIAA 197
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G + ++ + RI + + + I F G G +L
Sbjct: 198 GASAVQLFDSWVGAVAPEDYREFVLPHTSRIFAGLADL--DVPRIHFGVGTGELLALLGE 255
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
++ +G+DW VPL A ++ GP +QGNLDP L +V+ D+L G
Sbjct: 256 -AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPATLFAPWEVV---ERRAADILARG 309
Query: 316 P----FIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P DP + L V
Sbjct: 310 AKAEGHIFNLGHGVPPSTDPDQLARLTDFV 339
>gi|333023771|ref|ZP_08451835.1| putative uroporphyrinogen decarboxylase [Streptomyces sp. Tu6071]
gi|332743623|gb|EGJ74064.1| putative uroporphyrinogen decarboxylase [Streptomyces sp. Tu6071]
Length = 322
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 172/326 (52%), Gaps = 16/326 (4%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W MRQAGR LPEY + R+ L+ C PE E+T+QP+RR+ DAA+ FSDI+V
Sbjct: 1 MWFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITMQPVRRHKVDAAVYFSDIVVPL 59
Query: 82 DALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G ++ GP + DP+ ++ L P ++Y + ++I +L +L
Sbjct: 60 KAIGIDLDIKPGIGPVVADPVRGAADLARLRPLQPEDVSY---VTEAIGLLTAEL-GATP 115
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG ++H + + Y + LLD L+D++ +L QI AG
Sbjct: 116 LIGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWAQLLDRLADITTGFLKVQIEAG 175
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+Q+FD+ G L ++ Y + ++ +AV I F G G +L +
Sbjct: 176 ASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--GVPRIHFGVGTGELLHDLGE- 232
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGS-G 315
++ +G+DW VPL A ++ GP +QGNLDP L + + +LD
Sbjct: 233 AGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFADEAAIREKTTEVLDAARDLE 290
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV 341
IFNLGHG+ P DP + DLV V
Sbjct: 291 GHIFNLGHGVLPTTDPGVLTDLVADV 316
>gi|228990170|ref|ZP_04150140.1| Uroporphyrinogen decarboxylase [Bacillus pseudomycoides DSM 12442]
gi|228996256|ref|ZP_04155901.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock3-17]
gi|229003923|ref|ZP_04161729.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock1-4]
gi|228757292|gb|EEM06531.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock1-4]
gi|228763448|gb|EEM12350.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock3-17]
gi|228769533|gb|EEM18126.1| Uroporphyrinogen decarboxylase [Bacillus pseudomycoides DSM 12442]
Length = 348
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 184/339 (54%), Gaps = 16/339 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ +G P W MRQAGR PEYR+I++K+ F ++ + PE +T P+ +
Sbjct: 7 ETFLKACKGEQTEYIPAWYMRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
YN DAAIL+ DI+ A+G +V GP +D PI + +++ ++P D+
Sbjct: 66 YNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEIHPEEDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L
Sbjct: 123 --ILDTIRLLTNEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR
Sbjct: 180 MDKLADMVVTYLKAQIKAGAKAVQVFDSWVGTVNVADYRLFIKPAMERIFTEVRTM--GV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GAG++ + L+ + +GLDW + + A VQGN+DP L+ V
Sbjct: 238 PMIMHGVGAGHLANEWNDLS-LDVVGLDWRLSIEEARARGIHKAVQGNMDPSFLLAPWDV 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+ + V ILD P ++FNLGHG+ P+V+P + L
Sbjct: 297 IREHVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLT 335
>gi|299115713|emb|CBN74278.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 429
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 177/353 (50%), Gaps = 23/353 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIR-KKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ +G + P+WL RQAGR+LPEY + +K KNFL++ P+ E+T+QPIRRY
Sbjct: 61 LVRAAKGEKVERTPVWLFRQAGRHLPEYSAYKNEKGKNFLELLQDPDDVAEVTMQPIRRY 120
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEIYLLNPNIDLFLNYLL 121
N DAAILFSDILV+ ALG +V G P DP + ++ L++
Sbjct: 121 NLDAAILFSDILVVPQALGIDVEMPGGVGILVPHPLKDPADFEARIPKEVDVKDKLSH-- 178
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ Q+++ ++++L + LIGF APWT+ YM+ G K+ + + A ++
Sbjct: 179 -VIQAVTRIKEELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDSGERWLQDHPEASAKMM 237
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+ V +Y+ AQ+ AG D++Q+F+ G + E F + A + RI S ++ + P
Sbjct: 238 DLLTGVVIDYMAAQVEAGADILQVFEAMGGFISEDHFYDRAMPYLTRIASELKERCPGVP 297
Query: 242 FISFAKGAGY-----MLKNYRRLTDSNAIGLDWSVPL--SFALELQKE-GPVQGNLDPMR 293
+ FA+GA Y Y +T G + A E +E VQGN DP R
Sbjct: 298 LMVFARGATYANVALQAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDP-R 356
Query: 294 LVVGNQVMI-----DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L+ M + ++ LG I NLG G+ + DPK+V V +
Sbjct: 357 LLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAI 409
>gi|256372593|ref|YP_003110417.1| uroporphyrinogen decarboxylase [Acidimicrobium ferrooxidans DSM
10331]
gi|256009177|gb|ACU54744.1| uroporphyrinogen decarboxylase [Acidimicrobium ferrooxidans DSM
10331]
Length = 356
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 168/327 (51%), Gaps = 11/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R ++ L + PE +TLQP+ RY+ DAAIL+SDI+
Sbjct: 25 PVWFMRQAGRSLPEYRAVRG-VESILTVLEDPELAATITLQPVERYHVDAAILYSDIMAP 83
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS-ISILRKKLPNHIT 139
A G V V GP DP L +D F L S + ++ P +
Sbjct: 84 LAAAGVGVDIVPGLGPTFDPPIRARSDLAR--LDRFHPEALEAMASTVRLVTAASP--VP 139
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G P+TVASY+I G +D+ + ++ F LL+ L+D++A + Q+ AG
Sbjct: 140 LIGFAGGPFTVASYLIEGRPSRDYSATKRLMLADAGLFAALLERLTDIAAASIAVQVEAG 199
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ AG L F ++ AR + R+ + + I F+ G ++ + L
Sbjct: 200 ASAVQIFDSWAGALSGPAFRDHVARHLRRLAAVIGEL--GVPSIYFSVGTAHLEADICEL 257
Query: 260 TDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+A+G+DW V L FA +QGNLDP ++ V++ A+L P +
Sbjct: 258 -GFDAVGIDWRVDLEGFATRHGSRLALQGNLDPAYVLAPVDVVLAEARAVLTASAPAPGY 316
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P+ DP + +V V E
Sbjct: 317 VFNLGHGVLPESDPDVLARVVDLVHDE 343
>gi|325963983|ref|YP_004241889.1| uroporphyrinogen decarboxylase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470070|gb|ADX73755.1| uroporphyrinogen decarboxylase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 364
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 172/330 (52%), Gaps = 13/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++RK LD C PE E+TLQP+RR++ DA I FSDI++
Sbjct: 42 PVWFMRQAGRSLPEYLEVRKGVA-MLDSCLRPELASEITLQPVRRHDVDAGIFFSDIVIP 100
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP +D P+ T P L L PI +++ + +L N
Sbjct: 101 LKLAGVGVDIVPGVGPVLDTPVRTAADVAALPQ--LTWESLEPIREAVRLTVAELGN-TP 157
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + ++ L ++ +D S +L AQ+ AG
Sbjct: 158 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWSALANWAADASGMFLQAQLEAG 217
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG ++ Y A + R + VR + A I F G +L R +
Sbjct: 218 ASAAQLFDSWAGSLGLADYTKYVAPASTRALDHVR--HLGAPLIHFGTGTSELLVAMRDV 275
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+D+ +PL A L P+QGN+DP L +++ V ++ + P
Sbjct: 276 GVDVVG-VDYRLPLDEANRRLGGTVPLQGNIDPALLPAPWEILEAHVREVIAAGAAAPGH 334
Query: 318 IFNLGHGITPQVDP---KNVLDLVKTVRSE 344
+ NLGHG+ P+ DP V++L+ ++ E
Sbjct: 335 VVNLGHGVPPETDPAVLTRVVELIHSISPE 364
>gi|145341574|ref|XP_001415881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576104|gb|ABO94173.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 172/337 (51%), Gaps = 3/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+WLMRQAGRY+ E+R K+ F TPE +EL++QP R +
Sbjct: 21 LLRAARGEDVERPPVWLMRQAGRYMAEFRAYSTKY-GFRHRSETPEIAIELSMQPWRAFK 79
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D I+FSDIL ALG V+ +GP + P+ T + +D + L + + +
Sbjct: 80 PDGVIMFSDILTPLPALGIEFDVVKGKGPVVTPVRTMDDVKAMKQLDDPDSQLPFVREIL 139
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S LRK++ T++GF G+PWT+A+Y + G + + Q+ + L L+D
Sbjct: 140 STLRKEIEGQSTMLGFIGSPWTLAAYAMEGSSDRHLVTTKQIMTQDPETLHAFLSKLADA 199
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y+ QI +G V+QIFD+ A L ++ ++ R+I+ V+++YP+ I A
Sbjct: 200 LGVYVCHQIDSGAQVVQIFDSWAHHLSPQQYLEFSHPYNERVIAYVKQRYPDTPLIFHAN 259
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L ++ T ++ IGLDW+ +S A L + +QGN+DPM L + + V
Sbjct: 260 GGCGKLHELKKST-ADVIGLDWNTSMSEARAVLGPDRVLQGNMDPMYLFASPERIRQEVA 318
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ GS I N+GHG+ +NV R+
Sbjct: 319 NNVRDAGSRKHILNVGHGVVQGTPEENVGHFCDAARA 355
>gi|238883927|gb|EEQ47565.1| uroporphyrinogen decarboxylase [Candida albicans WO-1]
Length = 361
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 184/343 (53%), Gaps = 23/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY +++ ++F + C E E+T+QP+ ++
Sbjct: 12 ILRAAKGEKVERPPIWIMRQAGRYLPEYHKVKGN-RDFFETCQDAEIASEITIQPVDHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNYLL 121
DAAI+FSDILVI A+G + VE +GP P+ T + L P++ L +
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFAAPLRTPDDLSRIDLKPDVKTKLAW-- 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + LL
Sbjct: 129 -AYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D E+L Q+ AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 188 QATCDACVEFLAQQVVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKELG 247
Query: 240 -AKFIS---FAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLDP 291
++I FAKGA Y L + L DS + + LDW A+++ + +QGNLDP
Sbjct: 248 VEEYIPMTVFAKGAWYALDD---LCDSGYDCVSLDWLYDPKNAVKVVNGRRITLQGNLDP 304
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ ++V+ V +L+ G +I N GHG P +DPK +
Sbjct: 305 GVMYGSDKVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKI 347
>gi|289641270|ref|ZP_06473436.1| uroporphyrinogen decarboxylase [Frankia symbiont of Datisca
glomerata]
gi|289508868|gb|EFD29801.1| uroporphyrinogen decarboxylase [Frankia symbiont of Datisca
glomerata]
Length = 319
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 175/329 (53%), Gaps = 22/329 (6%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
+W MRQAGR LPEYR++R LD C P+ E+TLQPIRR+ DAAILFSDI++
Sbjct: 1 MWFMRQAGRALPEYRRLRAG-TAMLDSCRDPDMVTEITLQPIRRFRTDAAILFSDIVLPL 59
Query: 82 DALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G ++ V GP + +PI + L P + Y + +++ L ++L
Sbjct: 60 VAIGVDIDIVAGVGPVVAEPIRDGAALARLRPLAGDDVPY---VTEAVHTLVREL-GPTP 115
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG + H + + Y + ++ L D L+D++ YL Q+ AG
Sbjct: 116 LIGFAGAPFTLASYLVEGGPSRTHARTKQLMYSAPQVWHELADRLADITIGYLRVQVDAG 175
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V +Q+FD+ AG L E ++ Y R++ A I F G +L
Sbjct: 176 VSALQLFDSWAGALDEADYRRYVLPHSRRVLEAFAGD--GVPRIHFGVNTGELLAVMAE- 232
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
++ +G+DW VPL A + GP VQGNLDP + V+ + V+ DV G
Sbjct: 233 AGADVVGVDWRVPLDEA--AHRIGPGRAVQGNLDPTAVFAPRDVLAEKVH---DVCSRGA 287
Query: 317 ----FIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P+ DP + +V+ V
Sbjct: 288 KADGHVFNLGHGVLPETDPDVLAHIVELV 316
>gi|182435266|ref|YP_001822985.1| uroporphyrinogen decarboxylase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775905|ref|ZP_08235170.1| Uroporphyrinogen decarboxylase [Streptomyces cf. griseus XylebKG-1]
gi|254767708|sp|B1VWH6|DCUP_STRGG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|178463782|dbj|BAG18302.1| putative uroporphyrinogen decarboxylase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326656238|gb|EGE41084.1| Uroporphyrinogen decarboxylase [Streptomyces cf. griseus XylebKG-1]
Length = 365
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 177/330 (53%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 43 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVAEITLQPVRRHKVDAAIYFSDIVVP 101
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI T+ ++ L DL + + ++I +L +L
Sbjct: 102 LKAIGIDLDIKPGVGPVIAEPIRTRADLARLR---DLTPEDVPYVTEAIGMLTAEL-GAT 157
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + + + L+D L++++ +L QI A
Sbjct: 158 PLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPQLWADLVDRLAEITGAFLKVQIEA 217
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 218 GASAVQLFDSWVGALAPADYRRAVLPASAKVFDAVAPY--GVPRIHFGVGTGELL-GLMG 274
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL+ A ++ GP +QGNLDP L + + +LD G
Sbjct: 275 EAGADVVGVDWRVPLNEA--ARRVGPGKALQGNLDPAVLFAPTPAVEEKTREVLDAAAGL 332
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P +DP + LV V +
Sbjct: 333 EGHIFNLGHGVMPNMDPDALTRLVGYVHEQ 362
>gi|304570645|ref|YP_832251.2| uroporphyrinogen decarboxylase [Arthrobacter sp. FB24]
Length = 373
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 172/330 (52%), Gaps = 13/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR++ DAAI FSDI++
Sbjct: 51 PVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELASEITLQPVRRHDVDAAIFFSDIVIP 109
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP +D P+ T E P L L PI +++ + +L
Sbjct: 110 LKLAGVGVDIVPGVGPVLDKPVRTAEDVAALPQ--LTWEALEPIREAVRLTVAQL-GKTP 166
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + +N L ++ +D S +L AQ+ AG
Sbjct: 167 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANWAADASGMFLRAQLEAG 226
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG +++ + A + R + VR + A I F G +L R +
Sbjct: 227 ASAGQLFDSWAGSLGLADYKRFVAPASARALDHVR--HLGAPLIHFGTGTSELLVAMRDV 284
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+D+ +PL A L P+QGN+DP L V+ V ++ P
Sbjct: 285 GVDVVG-VDYRLPLDEANRRLGGTVPLQGNIDPALLSAPWAVLEAHVREVIKAGSFAPGH 343
Query: 318 IFNLGHGITPQVDP---KNVLDLVKTVRSE 344
+ NLGHG+ P+ DP V++L+ ++ E
Sbjct: 344 VLNLGHGVPPETDPDVLTRVVELIHSISPE 373
>gi|255071125|ref|XP_002507644.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522919|gb|ACO68902.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 391
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 179/341 (52%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PPIW+MRQAGRY+ Y+ + K+ F + + VE++LQP +
Sbjct: 53 MLRAIRGEKVERPPIWMMRQAGRYMKIYQDLCKRHPTFRERSEKVDLAVEISLQPWEAFQ 112
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQE----IYLLNPNIDLFLNYLLP 122
D ILFSDIL + V+ GP M+P+ + E I L P +
Sbjct: 113 PDGVILFSDILTPLSGMNIPFDIVKGTGPIIMNPVRSMEDVKTINALEPEKSVPF----- 167
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +LR+++ N+ T++GF GAP+T+ASY++ GG + + A+ ++ LL
Sbjct: 168 VGEALGLLRQEVGNNATVLGFVGAPFTLASYIVEGGTSTHYKVIKKMAFDAPDVYHALLS 227
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D EY+ Q +G V+QIFD+ A +FENY + RI+ V+ +P+
Sbjct: 228 SITDSVVEYVKYQADSGAQVVQIFDSWASEFCPADFENYCLPYLKRIVDEVKVTHPDLPL 287
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I +A G+G +L+ + T ++ I LD +V + A L E VQGN+DP+ L +V+
Sbjct: 288 ILYASGSGGLLERL-QTTGADVISLDGTVDMEDARRRLGPEQAVQGNIDPVTLFASKEVI 346
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
D V + G + NLGHG+ ++V KTVR
Sbjct: 347 TDRVLQTIQKAGDKKHVVNLGHGVMQGTPEEHVAHFFKTVR 387
>gi|239945116|ref|ZP_04697053.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
gi|239991579|ref|ZP_04712243.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
11379]
gi|291448579|ref|ZP_06587969.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
gi|291351526|gb|EFE78430.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
Length = 365
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 175/330 (53%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 43 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVAEITLQPVRRHKVDAAIYFSDIVVP 101
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI T+ ++ L DL + + ++I IL +L
Sbjct: 102 LKAIGIDLDIKPGVGPVIAEPIRTRADLARLR---DLTPEDVPYVTEAIGILTAEL-GAT 157
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + + + L+D L++++ +L QI A
Sbjct: 158 PLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPQLWADLVDRLAEITGAFLKVQIEA 217
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 218 GASAVQLFDSWVGALAPADYRRAVLPASAKVFDAVAPY--GVPRIHFGVGTGELL-GLMG 274
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L + +LD G
Sbjct: 275 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAPTPAVEAKTREVLDAAAGL 332
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P +DP + LV V +
Sbjct: 333 DGHVFNLGHGVMPNMDPDALTRLVAYVHEQ 362
>gi|171855200|sp|A0JYN1|DCUP_ARTS2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116611427|gb|ABK04151.1| uroporphyrinogen decarboxylase [Arthrobacter sp. FB24]
Length = 345
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 172/330 (52%), Gaps = 13/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR++ DAAI FSDI++
Sbjct: 23 PVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELASEITLQPVRRHDVDAAIFFSDIVIP 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP +D P+ T E P L L PI +++ + +L
Sbjct: 82 LKLAGVGVDIVPGVGPVLDKPVRTAEDVAALPQ--LTWEALEPIREAVRLTVAQL-GKTP 138
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + +N L ++ +D S +L AQ+ AG
Sbjct: 139 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANWAADASGMFLRAQLEAG 198
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG +++ + A + R + VR + A I F G +L R +
Sbjct: 199 ASAGQLFDSWAGSLGLADYKRFVAPASARALDHVR--HLGAPLIHFGTGTSELLVAMRDV 256
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+D+ +PL A L P+QGN+DP L V+ V ++ P
Sbjct: 257 GVDVVG-VDYRLPLDEANRRLGGTVPLQGNIDPALLSAPWAVLEAHVREVIKAGSFAPGH 315
Query: 318 IFNLGHGITPQVDP---KNVLDLVKTVRSE 344
+ NLGHG+ P+ DP V++L+ ++ E
Sbjct: 316 VLNLGHGVPPETDPDVLTRVVELIHSISPE 345
>gi|297156495|gb|ADI06207.1| uroporphyrinogen decarboxylase [Streptomyces bingchenggensis BCW-1]
Length = 361
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 176/329 (53%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C P+ E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 39 PVWFMRQAGRSLPEYHKVREGIA-MLDSCTRPDLITEITLQPVRRHHVDAAVYFSDIVVP 97
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + DPI T+ ++ L P + Y + +++ +L +L
Sbjct: 98 LKAIGLDLDIKPGVGPVIADPIRTRADLDRLRPLDPDDVKY---VTEAVGMLTGEL-GAT 153
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG ++H + + Y + + LLD L+D++A +L QI A
Sbjct: 154 PLIGFAGAPFTLASYLIEGGPSRNHERTKALMYGDPELWAELLDRLADIAAAFLKVQIEA 213
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I + G L
Sbjct: 214 GASAVQLFDSWVGALSPADYRARVMPASTKVFDAVAGY--GVPRIHYGVGT-GELLGLLG 270
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
++ +G+DW VPL A ++ GP +QGNLDP L Q + + +LD G
Sbjct: 271 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAPRQAVEAKTDEVLDAARGL 328
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP + LV+ V +
Sbjct: 329 EGHIFNLGHGVLPSTDPDALTRLVEYVHT 357
>gi|229195379|ref|ZP_04322148.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1293]
gi|228588078|gb|EEK46127.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1293]
Length = 323
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 178/325 (54%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQIHAG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQIHAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|116075430|ref|ZP_01472690.1| uroporphyrinogen decarboxylase [Synechococcus sp. RS9916]
gi|116067627|gb|EAU73381.1| uroporphyrinogen decarboxylase [Synechococcus sp. RS9916]
Length = 352
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + + LNP +
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPAESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 121 PF-----VGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPD 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 ILHKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQ 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +++ T + + LDW+V ++ AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVIERM-ATTGVDIVSLDWTVDMAEALARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 295 FGSPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|86170683|ref|XP_966063.1| term=uroporphyrinogen III
decarboxylase;db_xref=PMID:19041871;evidence=inferred
from direct assay [Plasmodium falciparum 3D7]
gi|46362305|emb|CAG25243.1| term=uroporphyrinogen III
decarboxylase;db_xref=PMID:19041871;evidence=inferred
from direct assay [Plasmodium falciparum 3D7]
gi|70780288|gb|AAZ08395.1| uroporphyrinogen III decarboxylase [Plasmodium falciparum]
Length = 413
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 191/332 (57%), Gaps = 10/332 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +IRKK+ +F ++C +P+ + +++ P R+ D ++FSDIL+I
Sbjct: 83 PLWIMRQAGRYLPEYVEIRKKY-DFFEICKSPDLSSYVSIMPYDRFKTDMIVIFSDILII 141
Query: 81 ADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++FVEN GP ++ + LN N+ ++ L ++ SI++ +KK+ N +
Sbjct: 142 FVAMGIDIKFVENLGPVFNLEIYNMNDFNKLNLNMKEIIDNLYYVYDSINLTKKKINNDV 201
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
++GFCG+P+T+ Y+ K + + F Y+ + +++ LSD+ +LI QI +
Sbjct: 202 PILGFCGSPFTLFMYLTKNN-KKTYEDSFKFLYEKPNDAHQIINKLSDICLNHLINQIDS 260
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY-MLKNYR 257
G ++IQIFD++A + ++ F ++ + ++I +++ PN I F K + +KN +
Sbjct: 261 GANIIQIFDSNAELVDKNIFNEFSIIYLKKVIEIIKKYRPNIYIILFIKNNFHDDIKNLK 320
Query: 258 --RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG--VNAILDVLG 313
L+ ++ +D + F L Q +QG LDP L++ + +I + + ++
Sbjct: 321 IDVLSITHKQLIDNTDQFYFKL-FQNNIILQGALDPYILLLNDHELIQKHIIQMMKNITH 379
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+I NLGHGI P KNV + T+R+ +
Sbjct: 380 KNKYIANLGHGILPTTKIKNVNLFIDTIRNNE 411
>gi|284104496|ref|ZP_06386142.1| Uroporphyrinogen decarboxylase [Candidatus Poribacteria sp. WGA-A3]
gi|283830196|gb|EFC34450.1| Uroporphyrinogen decarboxylase [Candidatus Poribacteria sp. WGA-A3]
Length = 320
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 169/312 (54%), Gaps = 17/312 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRY+ EY+++R K LD+C TP+ E+TLQPI R++ DAAI+F+DIL+ + +
Sbjct: 1 MRQAGRYMAEYQRMRAK-HGILDVCKTPDLAAEVTLQPIERFDLDAAIIFADILLPLEPM 59
Query: 85 GRNVRFVENEGPR-MDPITTQE-IYLLNP-NIDLFLNYLLPIFQS--ISILRKKLPNHIT 139
G + F E EGP ++P+ Q+ + L P D F F S +S+ +K L +
Sbjct: 60 GLQLTFREEEGPVILNPVRHQDDVTRLRPVERDAFR------FSSDAVSLTKKALDGRVP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY I GG +++ + + ++ LL SDV YL QI AG
Sbjct: 114 LIGFAGAPFTLASYAIEGGSSRNYLNTKQMMFGRPDQWHALLRKFSDVVVTYLENQIRAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
VD +QIFD+ GCL ++ Y V II R K I F G +L R
Sbjct: 174 VDAVQIFDSWVGCLTPADYGEYVLPHVQTIID--RLKPEGIPIIYFGTGTSTLLPLMRS- 230
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPF 317
S+ +GLDW V L A + + VQGNLDP+ L + + ILD G+
Sbjct: 231 AGSDVLGLDWHVELDEAWARVGFDVAVQGNLDPVVLFAPLPEIERRIKDILDRAGNRAGH 290
Query: 318 IFNLGHGITPQV 329
IFNLGHGI P+
Sbjct: 291 IFNLGHGILPKT 302
>gi|166365870|ref|YP_001658143.1| uroporphyrinogen decarboxylase [Microcystis aeruginosa NIES-843]
gi|189083010|sp|B0JL12|DCUP_MICAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166088243|dbj|BAG02951.1| uroporphyrinogen decarboxylase [Microcystis aeruginosa NIES-843]
Length = 350
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 189/342 (55%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR++R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAAKGEILPRPPVWMMRQAGRYMQIYRELRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G +E++GP +D PI TQ ++ LNP L + LP +
Sbjct: 70 PDGVIMFSDILTPLAGIGIPFDIIESKGPIIDSPIRTQAQVDQLNP---LDPDQSLPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LD L
Sbjct: 127 TILKTLRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V L+ A + L K VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGK-SGVDIISVDWTVDLAEARQRLGKAMMVQGNIDP-GVLFGSQSFIR 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I+D + G+ I NLGHG+ NV +T +
Sbjct: 305 --ERIIDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAK 344
>gi|145353039|ref|XP_001420838.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581073|gb|ABO99131.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 176/345 (51%), Gaps = 20/345 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PPIW+MRQAGRY+ Y+ + KK F + T + VE++LQP +
Sbjct: 1 MLRAIRGEDVERPPIWMMRQAGRYMKVYQDLCKKHTTFRERSETVDLAVEISLQPYEAFK 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGP-------RMDPITTQEIYLLNPNIDLFLNYL 120
D ILFSDIL + V+ GP MD I + I L P +
Sbjct: 61 PDGVILFSDILTPLQGMNIPFDIVKGTGPIIFNPVREMDDI--KSITPLEPEKSVPF--- 115
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +S+ +LR ++ N TL+GFCGAP+T+ASY++ GG + + A+ + + L
Sbjct: 116 --VGESLKVLRNEIGNEATLLGFCGAPFTLASYIVEGGTSSHYKVIKKMAFDSPAVYEAL 173
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L+D EY Q +G V+QIFD+ A +FE Y + RI++ ++ +P+
Sbjct: 174 MNKLTDAVIEYTRYQADSGAQVVQIFDSWASEFSPADFEVYCLPYLQRIVAECKQTHPHV 233
Query: 241 KFISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I ++ G+ L+ RL +NA I LD ++ ++ A L + VQGN+DP+ L
Sbjct: 234 PLILYSSGSAGFLE---RLATTNADVISLDGTIDMADARARLGMDQAVQGNMDPLHLFAS 290
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ + G+ + NLGHG+ +NV KTVR
Sbjct: 291 QDFITKKVHETIAKAGNKKHVMNLGHGVMVGTPEENVGHFFKTVR 335
>gi|138894243|ref|YP_001124696.1| uroporphyrinogen decarboxylase [Geobacillus thermodenitrificans
NG80-2]
gi|166234250|sp|A4IKU7|DCUP_GEOTN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|134265756|gb|ABO65951.1| Uroporphyrinogen decarboxylase [Geobacillus thermodenitrificans
NG80-2]
Length = 345
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 183/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRACRGEKTAYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ Y+L
Sbjct: 69 DAAILYKDIMTPLPAIGVDVEIRGGVGPVIANPIRSLHDVERLGEIDPEHDV--PYVL-- 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 -ETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVKAQIQAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLAHEWNDLP-LDVIGLDWRLSIREARRRGITKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 300 RVKRILDEGMEQPGYIFNLGHGIFPDVQPATLKRLT 335
>gi|18400577|ref|NP_566495.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|30683381|ref|NP_850587.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|238064978|sp|Q93ZB6|DCUP1_ARATH RecName: Full=Uroporphyrinogen decarboxylase 1, chloroplastic;
Short=UPD1; Short=URO-D1; Flags: Precursor
gi|332642068|gb|AEE75589.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
gi|332642069|gb|AEE75590.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
Length = 418
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 178/339 (52%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G I+ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQP + +
Sbjct: 62 LVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFR 121
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E +GP + PI T+E + L+P ID L +
Sbjct: 122 PDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-ID--FEKLQFVGD 178
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + LL L+
Sbjct: 179 SLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLT 238
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+ + +
Sbjct: 239 KAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFY 298
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L + +
Sbjct: 299 INGNGGLLERMKG-TGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEE 357
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G I NLGHG+ + V +T R+
Sbjct: 358 IERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|328911047|gb|AEB62643.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens LL3]
Length = 357
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 182/341 (53%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGR PEYR++++K+ +++ + PE +T P+ +Y
Sbjct: 16 LKAARGEKAGHVPVWYMRQAGRSQPEYRKLKEKY-GLVEITHQPELCAYVTRLPVEQYGV 74
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP +D P+ + ++ LNP D+ +
Sbjct: 75 DAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIDKLGELNPEQDVPY-----V 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F + +A+ L+D
Sbjct: 130 LETIRLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHSMPQAWQMLMDK 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ Y AQI+AG IQIFD+ G L ++ Y + RI + + I
Sbjct: 189 LADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRMYIKPVMDRIFRELSAE--QVPLI 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ ++ L + +GLDW + + A + VQGNLDP L+ +V+ +
Sbjct: 247 MFGVGASHLAGDWHDLP-LDVVGLDWRLSIDDARKQGITKTVQGNLDPSLLLAPWEVIEE 305
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + + FIFNLGHG+ P V+P + L V
Sbjct: 306 KAKAILDQGMKTDRFIFNLGHGVFPDVNPDTLKKLTAFVHE 346
>gi|237785639|ref|YP_002906344.1| uroporphyrinogen decarboxylase [Corynebacterium kroppenstedtii DSM
44385]
gi|237758551|gb|ACR17801.1| uroporphyrinogen decarboxylase [Corynebacterium kroppenstedtii DSM
44385]
Length = 384
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 186/368 (50%), Gaps = 36/368 (9%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L+ G + P+W MRQAGR LPEYR++R+ L+ C+TP+ E+TLQP+R
Sbjct: 23 QSSLLDAAYGATPHHRPVWFMRQAGRSLPEYRKLRENI-GMLEACFTPDAAAEITLQPVR 81
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+N DAAI FSDI+V A G V V GP +D PI ++ P +D + + I
Sbjct: 82 RHNVDAAIFFSDIVVPLKAAGIGVEIVAGRGPIVDHPIRSRADIDSLPELDP--DSISSI 139
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L + LIGF GAP+T+ASY+I GG K H + + + +++ L+
Sbjct: 140 GEAVREIIGELRDDQALIGFAGAPFTIASYLIEGGPSKTHQHTKAMMHADPDSWHALMRV 199
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV--------RR 235
L+D +L QI G+D +Q+FD+ AG L ++ + A I V RR
Sbjct: 200 LTDYIKVFLGVQIDGGIDAMQLFDSWAGYLHARDYNDLVAPYSAEIFRFVSERSSRGGRR 259
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE------LQKEG------ 283
P I F G +L + + T + +G+DW V ++ A + K G
Sbjct: 260 PIPR---IHFGVTTGELLGSMAQ-TGPDVMGVDWRVDMATAAQRINVALADKNGEAGSGA 315
Query: 284 -PVQGNLDPMRLVVGNQVMIDGVNAIL----DVLGSGPF---IFNLGHGITPQVDPKNVL 335
+QGN+DP L G + + +N +L ++ G I NLGHG+ DP +
Sbjct: 316 ITLQGNIDPALLFAGKEAVDKEINHLLTTTDQLISEGKISGHIVNLGHGVLADTDPDVIS 375
Query: 336 DLVKTVRS 343
+V+ V S
Sbjct: 376 HIVEKVHS 383
>gi|229143778|ref|ZP_04272198.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST24]
gi|228639653|gb|EEK96063.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST24]
Length = 323
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 179/316 (56%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR+ + I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--DVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V +ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKSILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|224476892|ref|YP_002634498.1| uroporphyrinogen decarboxylase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254767707|sp|B9DN00|DCUP_STACT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|222421499|emb|CAL28313.1| uroporphyrinogen decarboxylase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 345
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 188/348 (54%), Gaps = 15/348 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL++++G + P+W MRQAGR PEYR +++K+ F ++ + PE +T
Sbjct: 1 MHSKNNTILKMIKGEEVTHTPVWFMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLL---NPNIDL 115
P+ Y DAAIL+ DI+ +G +V GP + T Q++ L +P D+
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVISNTIKTVQDVEKLGQIDPKRDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
Y+L +I +L ++ N + LIGF GAP+T+ASYMI GG K++ + +++
Sbjct: 120 --PYVL---DTIKLLTEEKLN-VPLIGFVGAPFTLASYMIEGGPSKNYHFTKAMMFRDEA 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L+D L D+S Y AQI AG ++IQIFD+ G L +F Y S+ R+I ++
Sbjct: 174 TWFALMDHLVDMSITYASAQIEAGAELIQIFDSWIGALNAVDFNYYIKPSMERLIKGIKA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++ + I F A ++++ + L + +G+DW + + +QGNLDP L+
Sbjct: 234 QH-DVPIILFGVNATHLIEEWNNLP-IDVLGIDWRTTIKETSDSGVAKTIQGNLDPSLLL 291
Query: 296 VGNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ ++ ILD + G IFNLGHG+ P+V+P + + V
Sbjct: 292 APWDVIQPRLDKILDEGMQHGKHIFNLGHGVFPEVNPDTLKQITAYVH 339
>gi|196251138|ref|ZP_03149816.1| uroporphyrinogen decarboxylase [Geobacillus sp. G11MC16]
gi|196209336|gb|EDY04117.1| uroporphyrinogen decarboxylase [Geobacillus sp. G11MC16]
Length = 345
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 183/336 (54%), Gaps = 16/336 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+ +Y
Sbjct: 10 LRACRGEKTAYVPVWYMRQAGRSQPEYRALKEKYSLF-EITHQPELCAYVTRLPVEQYGV 68
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ A+G +V GP + +PI + + + ++P D+ Y+L
Sbjct: 69 DAAILYKDIMTPLPAIGVDVEIRGGVGPVIANPIRSLHDVERLGEIDPEHDV--PYVL-- 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 -ETIRLLVNEQLD-VPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVKAQIQAGASTVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLAHEWNDLP-LDVIGLDWRLSIREARRRGITKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
V ILD P +IFNLGHGI P V P + L
Sbjct: 300 RVKRILDEGMEQPGYIFNLGHGIFPDVQPATLKRLT 335
>gi|16323119|gb|AAL15294.1| AT3g14930/K15M2_7 [Arabidopsis thaliana]
Length = 418
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 178/339 (52%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G I+ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQP + +
Sbjct: 62 LVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFR 121
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E +GP + PI T+E + L+P ID L +
Sbjct: 122 PDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-ID--FEKLQFVGD 178
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + LL L+
Sbjct: 179 SLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLT 238
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+ + +
Sbjct: 239 KAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFY 298
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L + +
Sbjct: 299 INGNGGLLERMKG-TGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEE 357
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G I NLGHG+ + V +T R+
Sbjct: 358 IERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|78212551|ref|YP_381330.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9605]
gi|123756918|sp|Q3AKV7|DCUP_SYNSC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78197010|gb|ABB34775.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9605]
Length = 352
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 182/339 (53%), Gaps = 12/339 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + D ILFSDIL +G + +E++GP++ DPI + + LNP+ +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPLNPSESM 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + LR+ + N ++GF GAPWT+A+Y++ G K++ + ++
Sbjct: 121 PF-----VGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREPE 175
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++
Sbjct: 176 ILHKLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKK 235
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ FI + G+ +++ T + + LDW+V ++ AL L + VQGN+DP L
Sbjct: 236 THPDTPFILYISGSAGVIERMAN-TGVDIVSLDWTVDMAEALARLPEHIGVQGNVDPGLL 294
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ + ++ + I NLGHGI P +N
Sbjct: 295 FGTPEAIEARIDDCVRKARGRKHILNLGHGILPGTPEEN 333
>gi|308172996|ref|YP_003919701.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens DSM
7]
gi|307605860|emb|CBI42231.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens DSM
7]
gi|328552640|gb|AEB23132.1| uroporphyrinogen decarboxylase [Bacillus amyloliquefaciens TA208]
Length = 353
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 182/341 (53%), Gaps = 16/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGR PEYR++++K+ +++ + PE +T P+ +Y
Sbjct: 12 LKAARGEKAGHVPVWYMRQAGRSQPEYRKLKEKY-GLVEITHQPELCAYVTRLPVEQYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G +V GP +D P+ + ++ LNP D+ +
Sbjct: 71 DAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIDKLGELNPEQDVPY-----V 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F + +A+ L+D
Sbjct: 126 LETIRLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHSMPQAWQMLMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ Y AQI+AG IQIFD+ G L ++ Y + RI + + I
Sbjct: 185 LADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRMYIKPVMDRIFRELSAE--QVPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ ++ L + +GLDW + + A + VQGNLDP L+ +V+ +
Sbjct: 243 MFGVGASHLAGDWHDLP-LDVVGLDWRLSIDDARKQGITKTVQGNLDPSLLLAPWEVIEE 301
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + + FIFNLGHG+ P V+P + L V
Sbjct: 302 KAKAILDQGMKTDRFIFNLGHGVFPDVNPDTLKKLTAFVHE 342
>gi|270015170|gb|EFA11618.1| hypothetical protein TcasGA2_TC030590 [Tribolium castaneum]
Length = 330
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 184/347 (53%), Gaps = 34/347 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G V + P+W+MRQAGRYLPE+ + RK +F ++C TP+ E+TL PI
Sbjct: 8 KNDRLLRAARGEVPDKLPVWVMRQAGRYLPEFMEFRKD-HSFFEICQTPQLACEVTLMPI 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
+RY+ DAAI+FSDILVI ALG V E P+T + + LN ++ L +
Sbjct: 67 KRYDLDAAIIFSDILVIPQALGMVV-----EMKAGIPLTLENFHELNKTGA--VDRLKYV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I++ R KL + L GF GAP + ++AY + + LL+
Sbjct: 120 GEAITLTRHKLDGKVPLFGFSGAP----------------AKKWLYAY--PKIAHKLLEL 161
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKYP 238
L++V +Y++ Q+ AG ++QIFD++A L + + + + +I +VR +K
Sbjct: 162 LTEVIIDYVVMQVEAGAQILQIFDSNADLLNKELYTKFGLPYLKKIRDSVRLKLNQKKLE 221
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVV 296
+ FAKGA Y L L +G+DW++ L K VQGNLDP L
Sbjct: 222 QVPMVLFAKGAHYCLAEQADL-GYEVLGVDWTLEPQVVRTLLKGKNVTVQGNLDPCALYA 280
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +I V+ +++ GS +I NLGHGI P +++ LV+TV +
Sbjct: 281 PKEELIALVHKMVEEFGSQRYIVNLGHGIYPDAPTESLQTLVETVHN 327
>gi|320007814|gb|ADW02664.1| uroporphyrinogen decarboxylase [Streptomyces flavogriseus ATCC
33331]
Length = 369
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 47 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVTEITLQPVRRHKVDAAIYFSDIVVP 105
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI T+ ++ L DL + + +I +L +L
Sbjct: 106 LKAIGIDLDIKPGIGPVIAEPIRTRADLARLR---DLTPEDVPYVTAAIGMLTAEL-GAT 161
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + + LLD L++++ +L QI A
Sbjct: 162 PLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPELWADLLDRLAEITGAFLKVQIEA 221
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 222 GASAVQLFDSWVGALAPADYRRSVMPASAKVFDAVASY--GVPRIHFGVGTGELL-GLMG 278
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VP+ ++ GP +QGNLDP L + + +LD G
Sbjct: 279 EAGADVVGVDWRVPMDEG--ARRVGPGKALQGNLDPAVLFAPTEAVEAKAREVLDAAAGL 336
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P DP + LV+ V +
Sbjct: 337 DGHIFNLGHGVMPSTDPDALTRLVEYVHRQ 366
>gi|84496257|ref|ZP_00995111.1| putative uroporphyrinogen decarboxylase [Janibacter sp. HTCC2649]
gi|84383025|gb|EAP98906.1| putative uroporphyrinogen decarboxylase [Janibacter sp. HTCC2649]
Length = 342
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 173/327 (52%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ L+ C TP+ E+T+QP+RR+N DAAI FSDI+V
Sbjct: 20 PVWFMRQAGRSLPEYRALREG-TVMLEACRTPDLVTEITMQPVRRHNVDAAIFFSDIVVP 78
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
A+G ++ V GP + P + L+ +L + + I +S+ L +L L
Sbjct: 79 LAAVGVDLDIVPGTGPVV-PAPFRTRADLDRLPELTADAIPDITESVQRLVGEL-GSTPL 136
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAP+T+ASY++ GG + H + + + + + +N L + L+ +S +L Q+ AG
Sbjct: 137 IGFAGAPFTLASYLVEGGPSRTHEKTKALMHGDPQLWNDLCERLAQISGAFLRVQVEAGA 196
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
IQ+FD+ G L ++ Y + ++AV I F G G +L +
Sbjct: 197 SAIQLFDSWVGALPRADYTAYVQKHSATALAAVADL--GVPRIHFGVGTGELL-DLMGEA 253
Query: 261 DSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
++ +G+D+ V L+ A+ L VQGNLDP L V+ V AI+D P I
Sbjct: 254 GADVVGVDYRVSLTDAVARLGDAYAVQGNLDPALLGAPWDVLEARVRAIVDEGRHAPGHI 313
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHG+ P DP + +V V
Sbjct: 314 FNLGHGVPPHADPDVLTRIVDVVHEHS 340
>gi|288818087|ref|YP_003432435.1| uroporphyrinogen-III decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|288787487|dbj|BAI69234.1| uroporphyrinogen-III decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|308751689|gb|ADO45172.1| uroporphyrinogen decarboxylase [Hydrogenobacter thermophilus TK-6]
Length = 336
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 186/344 (54%), Gaps = 25/344 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G I P+WLMRQAGRY+ EYR++R+K ++FL C E V+++L P+ +
Sbjct: 6 LLRSIRGEKIERFPVWLMRQAGRYMKEYRELREKERDFLSFCKNVELAVKVSLLPLELLD 65
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM----DPITTQEIYLLNPNIDLFLNYLLPI 123
DA I+FSDIL+ + +G + F E EGP + D + I + + F+N +
Sbjct: 66 VDAVIIFSDILIPLEPMGVCIEFKEGEGPVISWDRDVKALKRISYKDTD---FVN---EV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ + +K +P +IGFCG P+T+ SY+I G KD ++F ++ ++ L+
Sbjct: 120 IKGVKEAQKDVP----VIGFCGGPFTLLSYLIEGRGGKDMKDTKIFMWKQE-DYHALMSL 174
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D EYL QI AG D++QIFD+ A L ++ +YA + +++ ++R++ N I
Sbjct: 175 LVDNLIEYLKGQILAGADLVQIFDSWAMYLPYEDYRDYAETYLKKLLEGIKREF-NVPII 233
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F +G+G L+ + L + I +DW+V + + QGNLDP L + +
Sbjct: 234 YFYRGSGSFLEAIKDLP-VDVISVDWTVDMLGGMR-SVHRAFQGNLDPHVLYADEETIF- 290
Query: 304 GVNAILDVLGSGP----FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L++L P +IFNLGHG+ P ++ V LV V+S
Sbjct: 291 --KKTLELLRCVPRKTKYIFNLGHGLMPDMEFNKVKFLVNAVKS 332
>gi|311898878|dbj|BAJ31286.1| putative uroporphyrinogen decarboxylase [Kitasatospora setae
KM-6054]
Length = 359
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 171/329 (51%), Gaps = 18/329 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C P+ E+TLQP+RR+ DAAI FSDI+V
Sbjct: 35 PVWFMRQAGRSLPEYLKVREGIP-MLDSCMRPDLVKEITLQPVRRHKVDAAIFFSDIVVP 93
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +V GP + DPI T+ ++ L P + Y I +++ +L +L
Sbjct: 94 LKAVGIDVEIKAGVGPVIADPIRTEADLQRLRPLEPDDMPY---ITEAVGLLVAEL-GAT 149
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG K + + Y + L+D L+ +++ +L QI A
Sbjct: 150 PLIGFAGAPFTLASYLVEGGPSKSYENTKAMMYGAPELWAGLVDRLAQITSAFLKIQIEA 209
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ AG L E+ + ++ AV I F G +L +
Sbjct: 210 GASAVQLFDSWAGALAPDEYRRSVLPASTKVFDAVAPY--GVPRIHFGVNTGELLGLMGQ 267
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAIL---DVL 312
++ +G+DW VPL A + GP +QGNLDP L V+ +L L
Sbjct: 268 -AGADIVGVDWRVPLDEA--ANRVGPGKGLQGNLDPAVLYAPTHVVETKAREVLHAAQAL 324
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G IFNLGHG+ P +DP + LV V
Sbjct: 325 GGSHHIFNLGHGVMPSMDPDALTRLVAFV 353
>gi|325115608|emb|CBZ51163.1| uroporphyrinogen decarboxylase,related [Neospora caninum Liverpool]
Length = 651
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 178/363 (49%), Gaps = 46/363 (12%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY-NFDAAILFSDILV 79
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP R+ DA I+FSDILV
Sbjct: 276 PVWMMRQAGRYLPEFRNMRRQH-GFLEVCRDPRLASELTLQPYHRFPQLDAVIIFSDILV 334
Query: 80 IADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
I +A+G + E GPR P +++ L P+I+ L Y +F ++ + ++L
Sbjct: 335 IPEAMGMKLSMEEGVGPRFAWRIESPADIKKL-TLKPDIENTLGY---VFDAVYVTSQRL 390
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
I LIGFCG P T+ +YM+ GG K + + F Y+ A + LL +SD+ +YL+
Sbjct: 391 AGGIPLIGFCGGPLTLLTYMVEGGGSKTWRRAKKFIYEEPEATHTLLQVISDICVDYLVG 450
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------- 247
Q AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 451 QADAGAQVLQVFDTNASQFAADTYDEIGAPFLASIAERVKERRPHVTMIAFPKDRPSPVF 510
Query: 248 ----------GAGYMLKNYRRL---------TDSNAIGLDWSVPLSFALELQKE------ 282
G+ + + +R + A G + S +++
Sbjct: 511 ADSAFDVISLGSSAEIDSMQRRFSGRRETGKSGEAAEGAESRGTCSGEAGERRDRDNGER 570
Query: 283 ---GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+QGNLDP L + ++ G G I NLGHG+ P++ P++ ++
Sbjct: 571 ADGKALQGNLDPQILYTDIATIKRETAKMIRRFGVGRHIANLGHGMEPEMSPEHAQAFIE 630
Query: 340 TVR 342
+V+
Sbjct: 631 SVK 633
>gi|297191332|ref|ZP_06908730.1| uroporphyrinogen decarboxylase [Streptomyces pristinaespiralis ATCC
25486]
gi|197720657|gb|EDY64565.1| uroporphyrinogen decarboxylase [Streptomyces pristinaespiralis ATCC
25486]
Length = 353
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 176/330 (53%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 31 PVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVTEITLQPVRRHKVDAAIFFSDIVVP 89
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI T+ ++ L DL + + + +++ +L +L
Sbjct: 90 LKAIGIDLDIKPGVGPVVAEPIRTRADLARLR---DLTPDDVRYVTEAMGMLTDEL-GPT 145
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + Y + + + LLD L+++++ +L QI A
Sbjct: 146 PLIGFAGAPFTLASYLVEGGPSRNHENTKALMYGDPQLWADLLDRLAEITSAFLKVQIEA 205
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 206 GASAVQLFDSWVGALAPADYRRSVMPASEKVFEAVASY--GVPRIHFGVGTGELL-GLMG 262
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L + + +LD G
Sbjct: 263 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFSSREAVESKTREVLDAAAGL 320
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P DP + LV V +
Sbjct: 321 EGHVFNLGHGVLPTTDPDALTRLVAYVHEQ 350
>gi|253573268|ref|ZP_04850611.1| uroporphyrinogen decarboxylase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846796|gb|EES74801.1| uroporphyrinogen decarboxylase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 353
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 193/344 (56%), Gaps = 21/344 (6%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+++ L+ ++ P+W MRQAGRY P+YR+I++K+ + L++C PE E+T+ P+R+
Sbjct: 6 RLIRALRKQEVDRLPVWYMRQAGRYDPDYRKIKEKY-SLLEICRQPELAAEVTMMPVRKL 64
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIF 124
DAAIL+SDI+ +LG V+N GP ++ PI T +I L P ID+ + L I
Sbjct: 65 GVDAAILYSDIMNPVASLGVKFDIVKNFGPVIEQPIRTLADIERLRP-IDVHKD-LSHIL 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I+IL K+L + LI F GAP+T+ASY+I G K + + + Y + A+ L+D L
Sbjct: 123 ETIAILDKEL--DVPLITFAGAPFTIASYLIEGRPSKSYSRTKAMMYGDPEAWFKLMDKL 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFI 243
D+ YL A + +G Q+FD+ G L +F+ Y ++ RI + ++ P F
Sbjct: 181 GDMVITYLRAHVESGGKAFQLFDSWVGALAPKDFQRYVLPTITRIFAELQDLDVPKIYFP 240
Query: 244 SFAKGAGYMLKNYRRLTD--SNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGN 298
+ +G +L LTD ++AIGLDW V +S ++ G +QGNLDP L
Sbjct: 241 GVS--SGELLPT---LTDIAADAIGLDWRVSISEG--RRRTGGKFAMQGNLDPYVLTAPM 293
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
V+ I+D + P F+FNLGHG+ P+ + +L + V
Sbjct: 294 DVIKAQAKEIIDDGLNAPGFVFNLGHGLFPEASLDKLRELTEFV 337
>gi|256833693|ref|YP_003162420.1| uroporphyrinogen decarboxylase [Jonesia denitrificans DSM 20603]
gi|256687224|gb|ACV10117.1| uroporphyrinogen decarboxylase [Jonesia denitrificans DSM 20603]
Length = 353
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 174/326 (53%), Gaps = 8/326 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY R+ L+ C P+ E+T+QP+RR+N DAAI FSDI++
Sbjct: 32 PVWFMRQAGRSLPEYIAARRGI-GMLESCLRPDLAAEITMQPVRRHNVDAAIFFSDIVIP 90
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V V GP + PI TQ ++ L + L PI ++I+++ +L +
Sbjct: 91 LRLAGVDVDIVSGVGPVLGSPIRTQADLDALESLTLTEDALAPIREAITLITAELGSR-P 149
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + L+ + + V+ ++L QI +G
Sbjct: 150 LIGFAGAPFTLAAYMVEGRPSRDHLAARHMMVGQPDLWARLMTWCARVTGQFLRTQILSG 209
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG L + + A + R+ + + + I F G++L + R +
Sbjct: 210 ASAAQLFDSWAGSLSRDLYVAHVAPASARVFAHISDL--DVPRIHFGTHTGHLLTDMREV 267
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+ IG+D+ PLS A L P+QGN+DP L V+ D V A+++ + P
Sbjct: 268 -GATVIGVDYRTPLSEANAILGGTTPLQGNIDPAYLGAPWPVLEDHVRAVVESGRAAPGH 326
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P DP + +V+ V S
Sbjct: 327 VVNLGHGVPPTTDPTVLTRIVELVHS 352
>gi|159030620|emb|CAO88288.1| hemE [Microcystis aeruginosa PCC 7806]
Length = 350
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 189/342 (55%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR++R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAAKGEILPRPPVWMMRQAGRYMQIYRELRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G +E++GP +D PI TQ ++ LNP L + LP +
Sbjct: 70 PDGVIMFSDILTPLAGIGIPFDIIESKGPIIDSPIRTQAQVDQLNP---LDPDQSLPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LD L
Sbjct: 127 TILKTLRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A + L K VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGK-SGVDIISVDWTVDMAEARQRLGKAMMVQGNIDP-GVLFGSQSFIR 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I+D + G+ I NLGHG+ NV +T +
Sbjct: 305 --ERIIDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAK 344
>gi|169603205|ref|XP_001795024.1| hypothetical protein SNOG_04611 [Phaeosphaeria nodorum SN15]
gi|160706347|gb|EAT88371.2| hypothetical protein SNOG_04611 [Phaeosphaeria nodorum SN15]
Length = 351
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 174/326 (53%), Gaps = 23/326 (7%)
Query: 27 QAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADAL 84
+AGRYLPEY + + K +F + C +PE LTLQPI RY DAAI+FSDILVI A+
Sbjct: 18 KAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPIERYAGLIDAAIIFSDILVIPQAM 76
Query: 85 GRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LNYLLPIFQSISILRKKLPNH 137
G V V+ +GP +P+ T E +L +D+ L+Y ++++I++ R KL
Sbjct: 77 GMEVIMVDKKGPHFPEPLQTPEDKQYKEVLEREVDVAESLDY---VYKAITMTRHKLAGR 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGFCGAPWT+ YM+ GG K Q + + Y+ LL ++++ EYL Q+
Sbjct: 134 VPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPAESKALLQKIAELCVEYLALQVQ 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYM 252
AG +IQ+FD+ AG L F+ ++ + I + + + FAKGA Y
Sbjct: 194 AGAQMIQVFDSWAGELSPSCFKEFSLPYLNIIADNLPARLKSKGLEPVPMTVFAKGAWYA 253
Query: 253 LKNYRRLTDSNAIGLDW--SVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD 310
L + T N IGLDW ++ + K +QGN DP L ++ + V ++
Sbjct: 254 LHDLCE-TKYNTIGLDWLHDPAEAYKIARAKGKVLQGNADPGVLYGTHESITKVVENMVA 312
Query: 311 VLGSGP--FIFNLGHGITPQVDPKNV 334
G G +I NLGHGITP V P ++
Sbjct: 313 GFGGGKEGWIANLGHGITPFVKPDDL 338
>gi|298243812|ref|ZP_06967619.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
gi|297556866|gb|EFH90730.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
Length = 359
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 176/329 (53%), Gaps = 12/329 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR L EYR +R+K+ + L M TPE + E+TL P++ + DAAI++SDIL
Sbjct: 35 PVWFMRQAGRCLAEYRALRQKY-DMLTMVKTPELSTEVTLMPVKTFGVDAAIIYSDILTP 93
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+A+G + GP + PI Q+ + PN Y++ Q+I ++R+++
Sbjct: 94 LEAMGVSFEIRHEVGPLIHHPIRNQQDVENIRIPNGPEIAPYMM---QAIQMVRREVEGK 150
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+IGF GAP+T+A Y+I G +D+ + Y ++ L++ L+ V+ YL Q+
Sbjct: 151 QAVIGFAGAPFTLACYLIEGRPSRDYRNAKAMMYSQPELWHALMEKLTTVTQSYLGEQVQ 210
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AGVD +Q+FD+ G L +E Y V I +V++ I F G +L++
Sbjct: 211 AGVDAVQLFDSWVGALSPSVYERYVQPYVHHIFDSVKQT--GIPAIHFGTGTSALLESM- 267
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ IGLD V L E + E VQGNLDP+ L+ V+ + +L + P
Sbjct: 268 TAAGGDIIGLDSHVELDEGWERVGFEHGVQGNLDPILLLTEWPVIESAMRDVLKRAANRP 327
Query: 317 -FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P +P + LV+ V +E
Sbjct: 328 GHIFNLGHGVLPPTNPDLLRQLVEAVHAE 356
>gi|294632017|ref|ZP_06710577.1| uroporphyrinogen decarboxylase [Streptomyces sp. e14]
gi|292835350|gb|EFF93699.1| uroporphyrinogen decarboxylase [Streptomyces sp. e14]
Length = 356
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 173/326 (53%), Gaps = 14/326 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+RR++ DAAI FSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYRKVREGI-GMLESCARPELAAEITLQPVRRHDVDAAIYFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G + GP ++ P T+E L DL + + ++I +L +L
Sbjct: 93 LKAIGVELDIKPGVGPVVERPFRTRED--LARLRDLTPEDVPYVTEAIGLLTAEL-GATP 149
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG + + + Y + + + LLD L+ ++A +L QI AG
Sbjct: 150 LIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPQLWADLLDRLAVITAGFLKVQIEAG 209
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+Q+FD+ AG L ++ + ++ AV I F G G +L
Sbjct: 210 ASAVQLFDSWAGALAPADYRRSVLPASAKVFEAVAGY--GVPRIHFGVGTGELL-GLMGE 266
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGSG 315
++ +G+DW VPL A +++ GP +QGNLDP L + + +L+ G
Sbjct: 267 AGADVVGVDWRVPLDEA--VRRVGPGKALQGNLDPTVLFASREAVEAKTREVLEAAAGLE 324
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P DP + LV V
Sbjct: 325 GHVFNLGHGVMPATDPDALTRLVAYV 350
>gi|145613461|ref|XP_363696.2| hypothetical protein MGG_01622 [Magnaporthe oryzae 70-15]
gi|145020529|gb|EDK04658.1| hypothetical protein MGG_01622 [Magnaporthe oryzae 70-15]
Length = 338
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 180/330 (54%), Gaps = 25/330 (7%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIAD 82
MRQAGRYLPEY + + ++F + C PE LTLQPI R++ DA+I+FSDILVI
Sbjct: 1 MRQAGRYLPEYHEAKGN-RDFFECCRDPEVASTLTLQPIDRFDGLLDASIIFSDILVIPQ 59
Query: 83 ALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLP 135
A+G V V+ +GP P Q +L ++D+ L+Y ++++I++ RKKL
Sbjct: 60 AMGMVVEMVDKKGPHFPNPLQSPDDGQYAEVLARDVDVSKELDY---VYKAITLTRKKLQ 116
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGFCGAPWT+ YM+ GG K Q++ + +++ +L ++++ EYL Q
Sbjct: 117 GRVPLIGFCGAPWTLFCYMVEGGGTKLFIQSKKWIFRHPEESKKMLQKIAELCVEYLALQ 176
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-----ISFAKGAG 250
+ AG ++Q+FD+ AG L FE ++A + I + ++ I F KGA
Sbjct: 177 VQAGAQLVQVFDSWAGELSPASFEQFSAPYLRYISENLPKRLKELSLDPVPMIVFPKGAW 236
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALELQ--KEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+ L++ + N +GLDW + A +++ +E +QGN DP L + V +
Sbjct: 237 FALEDCCAMG-YNVVGLDWLYSPAKANQVRGDREIVLQGNADPGVLYGTKDAITAAVKDM 295
Query: 309 LDVLG----SGPFIFNLGHGITPQVDPKNV 334
++ +I NLGHGITP V+P ++
Sbjct: 296 VEGFDWKEKKKGWIVNLGHGITPLVNPDDL 325
>gi|220913239|ref|YP_002488548.1| uroporphyrinogen decarboxylase [Arthrobacter chlorophenolicus A6]
gi|219860117|gb|ACL40459.1| uroporphyrinogen decarboxylase [Arthrobacter chlorophenolicus A6]
Length = 381
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 168/326 (51%), Gaps = 10/326 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR++ DA I FSDI++
Sbjct: 59 PVWFMRQAGRSLPEYLKVREGIA-MLDSCLRPELASEITLQPVRRHDVDAGIFFSDIVIP 117
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP +D P+ T P L L PI +++ + +L
Sbjct: 118 LKLAGVGVDIVPGVGPVLDKPVRTAVDVAALPK--LTWEALEPIREAVRLTVAEL-GKTP 174
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + +N L ++ +D S +L AQ+ AG
Sbjct: 175 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANWAADASGLFLRAQLEAG 234
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG +++ + A + R + VR + A I F G +L R +
Sbjct: 235 ASAGQLFDSWAGSLGLADYQRFVASASSRALDHVR--HLGAPLIHFGTGTSELLVAMRDV 292
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+D+ +PL A L P+QGN+DP L V+ V ++ P
Sbjct: 293 GVDVVG-VDYRLPLDEANRRLGGSVPLQGNIDPALLSAPWDVLEAHVREVIAAGAGAPGH 351
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P+ DP + +VK + S
Sbjct: 352 VLNLGHGVPPETDPDVLTRVVKLIHS 377
>gi|119961786|ref|YP_948467.1| uroporphyrinogen decarboxylase [Arthrobacter aurescens TC1]
gi|119948645|gb|ABM07556.1| uroporphyrinogen decarboxylase [Arthrobacter aurescens TC1]
Length = 371
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 170/330 (51%), Gaps = 13/330 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR++ DAAI FSDI++
Sbjct: 49 PVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELAAEITLQPVRRHDVDAAIFFSDIVIP 107
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G V V GP +D P+ T P L L PI +++ + +L
Sbjct: 108 LKLAGVGVDIVPGVGPVLDKPVRTAADVAALPT--LTWEALEPIREAVRLTVAEL-GKTP 164
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+A+YM+ G +DH R + + + L ++ +D S +L AQ+ AG
Sbjct: 165 LIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWAALANWAADTSGMFLQAQLEAG 224
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+FD+ AG LG ++ Y A + R + VR A I F G +L R +
Sbjct: 225 ASAAQLFDSWAGSLGLADYTKYVAPASTRALDHVRGL--GAPLIHFGTGTSELLVAMRDV 282
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+D+ +PL A L P+QGN+DP L +V+ V ++ P
Sbjct: 283 GVDVVG-VDYRLPLDEANRRLGGTVPLQGNIDPALLSAPWEVLEAHVREVIAAGSHAPGH 341
Query: 318 IFNLGHGITPQVDP---KNVLDLVKTVRSE 344
+ NLGHG+ P+ DP V++L+ ++ +E
Sbjct: 342 VLNLGHGVPPETDPTVLTRVVELIHSIPAE 371
>gi|311742290|ref|ZP_07716099.1| uroporphyrinogen decarboxylase [Aeromicrobium marinum DSM 15272]
gi|311313918|gb|EFQ83826.1| uroporphyrinogen decarboxylase [Aeromicrobium marinum DSM 15272]
Length = 345
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 179/340 (52%), Gaps = 14/340 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L +G + P+W MRQAGR LPEY +R+ L+ C+ + VE+TLQP+RRY
Sbjct: 11 LRAARGEQPDHTPVWFMRQAGRSLPEYLALREGVP-MLESCFRTDMVVEITLQPVRRYGV 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI FSDI+V A+G ++ V GP + +P+ E L D+ + + + ++
Sbjct: 70 DAAIFFSDIVVPLKAIGVDLDIVPGTGPVVAEPVRRPE--QLAQLRDVEPDDVTAVTDAV 127
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ L +L LIGF GAP+T+ASY+I GG +DH + Y + ++ LL ++ +
Sbjct: 128 TALVGEL-GSTPLIGFAGAPFTLASYLIEGGPSRDHRLTKQMMYAEPQLWHALLGRIAAI 186
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ ++L Q+ AG +Q+FD+ AG L ++E Y ++ +V I F
Sbjct: 187 AGQFLRLQVEAGASAVQLFDSWAGALSLADYERYVRPHSAAVLESVADL--GVPRIHFGV 244
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVM-ID 303
G G +L + ++ +G+DW VPL A +++ GP VQGNLDP + +V+ +
Sbjct: 245 GTGELLGSMGE-AGADVVGVDWRVPLDEA--VRRVGPGRSVQGNLDPTVVFAPTEVVHAE 301
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I + IFNLGHG+ P DP + LV V +
Sbjct: 302 AARVIEAGRAAQGHIFNLGHGVLPATDPDALARLVDFVHA 341
>gi|229160140|ref|ZP_04288141.1| Uroporphyrinogen decarboxylase [Bacillus cereus R309803]
gi|228623351|gb|EEK80176.1| Uroporphyrinogen decarboxylase [Bacillus cereus R309803]
Length = 323
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 178/316 (56%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR+ I GA +++ ++ L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKV--GVPMIMHGVGAAHLVNEWQDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKEPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|317508454|ref|ZP_07966124.1| uroporphyrinogen decarboxylase [Segniliparus rugosus ATCC BAA-974]
gi|316253301|gb|EFV12701.1| uroporphyrinogen decarboxylase [Segniliparus rugosus ATCC BAA-974]
Length = 363
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 172/347 (49%), Gaps = 17/347 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L L G+ + P+W MRQAGR LPEYR +R ++ L C PE E+TLQP+RR+
Sbjct: 23 LVALAGDRPSRRPVWFMRQAGRSLPEYRALRAG-RDMLATCLDPELVCEITLQPVRRHGV 81
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V G V GP +D P+ + ++ L P L P+ +
Sbjct: 82 DAAILFSDIVVPLKTAGVGVTIKPGVGPVLDAPVRARADVDALPPPSP---EGLEPVASA 138
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L +L LIGF GAP+T+ASY++ GG K H + + F LLD L+D
Sbjct: 139 VGSLIAEL-GQTPLIGFAGAPFTLASYLVEGGPSKHHEKTKALMTGAPDVFAALLDKLAD 197
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ +L AQ+ AG D +Q+FD+ G L ++E + R+ + + + + F
Sbjct: 198 HTISFLTAQLAAGADAVQVFDSWVGALTLADYERHVLPHTRRVFAEIAQF--GVPGVHFG 255
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV------GNQ 299
G++L T + AIG DW PL A + G +QGNLDP L+
Sbjct: 256 VNTGHLLGAMAG-TGAQAIGADWRTPLPEAAKAVGPGLALQGNLDPALLLAPRAALEAET 314
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ G+ +FNLGHG+ P+ DP + +V V SE +
Sbjct: 315 RRVLADADAALAEGTPGHVFNLGHGVLPETDPGALTAVVDLVHSEPV 361
>gi|297584766|ref|YP_003700546.1| uroporphyrinogen decarboxylase [Bacillus selenitireducens MLS10]
gi|297143223|gb|ADH99980.1| uroporphyrinogen decarboxylase [Bacillus selenitireducens MLS10]
Length = 347
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 182/343 (53%), Gaps = 17/343 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L+ + I+ P+W MRQAGR PEYR+++KK+ + + PE +T P+ +Y
Sbjct: 5 QFLKSCRKEAIDHVPVWYMRQAGRSQPEYRELKKKY-SLEGITEDPELCAYVTKLPVDQY 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT----TQEIYLLNPNIDLFLNYLL 121
+ DAAIL+ DI+ A+G +V+ + GP + +PIT + LNP D+
Sbjct: 64 DNDAAILYKDIMTPLPAMGVDVKIQKGIGPVISNPITGMRDVDALTALNPEKDVPY---- 119
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +LRK+L ++ LI F GAP+T+ASYMI GG K++ + + Y + L+
Sbjct: 120 -VLDTIKLLRKQL--NVPLISFSGAPFTLASYMIEGGPSKNYYKTKGLMYSEPETWFKLM 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L D+ Y+ AQ+ AG IQIFD+ G L + +++ Y + RI + ++ +
Sbjct: 177 DTLGDMVITYVKAQVQAGSQAIQIFDSWVGTLNQADYQFYVKPVMERIFNELQGE--GVP 234
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA ++ ++ + +GLDW P+ A + VQGNLDP L +V+
Sbjct: 235 LILFGIGARHLTLDWNSF-HLDVVGLDWRYPIHEARKDGVTKAVQGNLDPTVLTAPWRVI 293
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+D P F+FNLGHG+ P+VDP + L V
Sbjct: 294 ETRAKEIIDQGLEQPGFVFNLGHGVFPEVDPAKLRQLTAFVHD 336
>gi|282866540|ref|ZP_06275583.1| uroporphyrinogen decarboxylase [Streptomyces sp. ACTE]
gi|282558587|gb|EFB64146.1| uroporphyrinogen decarboxylase [Streptomyces sp. ACTE]
Length = 356
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 173/330 (52%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVTEITLQPVRRHKVDAAIYFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +P+ T+ ++ L DL + + ++I +L +L
Sbjct: 93 LKAIGIDLDIRPGIGPVIAEPVRTRADLARLR---DLTPEDVSYVTEAIGMLTAEL-GAT 148
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + Y + + LLD L++++ +L QI A
Sbjct: 149 PLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPELWADLLDRLAEITGAFLEVQIEA 208
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 209 GASAVQLFDSWVGALAPADYRRSVLPASAKVFDAVAGY--GVPRIHFGVGTGELL-GLMG 265
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL ++ GP +QGNLDP L + +LD G
Sbjct: 266 EAGADVVGVDWRVPLDEG--ARRVGPGKALQGNLDPAVLFAPTATVEAKTREVLDAAAGL 323
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHG+ P DP + LV+ V +
Sbjct: 324 EGHIFNLGHGVMPTTDPDALTRLVEYVHEQ 353
>gi|228957446|ref|ZP_04119200.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228977792|ref|ZP_04138176.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis Bt407]
gi|229126478|ref|ZP_04255492.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-Cer4]
gi|229149379|ref|ZP_04277615.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1550]
gi|229177601|ref|ZP_04304978.1| Uroporphyrinogen decarboxylase [Bacillus cereus 172560W]
gi|228605791|gb|EEK63235.1| Uroporphyrinogen decarboxylase [Bacillus cereus 172560W]
gi|228634021|gb|EEK90614.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1550]
gi|228656867|gb|EEL12691.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-Cer4]
gi|228781902|gb|EEM30096.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis Bt407]
gi|228802200|gb|EEM49063.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|326938814|gb|AEA14710.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 323
Score = 179 bits (453), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|297830042|ref|XP_002882903.1| hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp.
lyrata]
gi|297328743|gb|EFH59162.1| hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 5/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G ++ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQP + +
Sbjct: 62 LVKAAKGQSVSRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFR 121
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL A G E +GP + PI T+E ID L + S
Sbjct: 122 PDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDLKRLHAIDF--EKLQFVGDS 179
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + LL L+
Sbjct: 180 LKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPNVLRALLSHLTK 239
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+ + +
Sbjct: 240 AITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYI 299
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L + + +
Sbjct: 300 NGNGGLLERMKG-TGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEI 358
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ G I NLGHG+ + V +T R+
Sbjct: 359 ERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|70945538|ref|XP_742577.1| uroporphyrinogen decarboxylase [Plasmodium chabaudi chabaudi]
gi|56521640|emb|CAH75805.1| uroporphyrinogen decarboxylase, putative [Plasmodium chabaudi
chabaudi]
Length = 390
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 200/357 (56%), Gaps = 25/357 (7%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
E K K ++ N P W+MRQAGRYLPEYR+++K + +F D+CY PE + ++T+ P
Sbjct: 41 ENKDKEIDEKDEGEKNEIPFWIMRQAGRYLPEYRELKKNY-DFFDLCYNPELSSDITIMP 99
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFLNYL 120
+R++ D ++FSDIL+I A+G +++FVEN GP + ++ LN N+ +N L
Sbjct: 100 YKRFSCDMVVIFSDILIIFIAMGIDIKFVENVGPIFNKEINNLEDFTKLNLNLKEIINNL 159
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFN 178
++ SI++ ++K+ N + ++GFCG+P+T+ +Y+ K + ++ Y++S +
Sbjct: 160 HFVYDSINLTKRKINNSVPVLGFCGSPFTLFTYLTKNHVSKLMPYEKSLKLIYEHSADTH 219
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ L ++ +L+ QI +G ++IQIFD++A + ++ F+ ++ + +I+ ++ P
Sbjct: 220 TILNILCNICISHLLNQIDSGANLIQIFDSNAEIVDKNIFKEFSLYYINKIVHTIKAYRP 279
Query: 239 NAKFISFAKGAGY-MLKN---------YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
N I F K + +KN +++L ++ G ++ L + + +QG
Sbjct: 280 NTYIILFVKDNFHDDIKNLDIEILSITHKQLINN---GSNYYYDL-----FKNKIILQGA 331
Query: 289 LDPMRLVVGNQVMIDGVNA--ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LDP L++ N+ + + I + +I +LGHGI P +NV ++ V+S
Sbjct: 332 LDPHILLLDNKETVKKYTSQMIQQISYKNKYIASLGHGILPNSKIENVHAFIQAVKS 388
>gi|229042916|ref|ZP_04190649.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH676]
gi|228726381|gb|EEL77605.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH676]
Length = 323
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGIHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|255568118|ref|XP_002525035.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
gi|223535697|gb|EEF37362.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
Length = 429
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 176/341 (51%), Gaps = 7/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G ++ PP W+MRQAGRY+ YR++ +K+ +F + T + VE++LQP ++
Sbjct: 76 LVKAARGEPVSRPPAWMMRQAGRYMAVYRKVAEKYPSFRERSETTDLIVEISLQPWEAFH 135
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E GP + PI ++E + L+P + L L +
Sbjct: 136 PDGVIIFSDILTPLPAFGVPFDIEEVRGPVIQTPICSEEGLKALHP---IELEKLHFVGD 192
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ ++GF GAPWT+A+Y++ GG + + + + LL L+
Sbjct: 193 SLRILRREVDGRAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRALLSHLT 252
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+EY++ Q+ +G IQIFD+ G L ++ ++ + ++ VR K P + +
Sbjct: 253 QAISEYIVFQVESGAQCIQIFDSWGGQLPPEMWDCWSKPYIEEVVRKVRSKCPEIPLVLY 312
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T + IGLDW+V ++ + G VQGN+DP L + D
Sbjct: 313 INGNGGLLERMKG-TGVDVIGLDWTVDMADGRKRLGSGISVQGNVDPAYLFSPLSALTDE 371
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ G I NLGHG+ + V + RS K
Sbjct: 372 IQRVVRCAGPKGHILNLGHGVLVGTPEEAVAHFFEVARSLK 412
>gi|229131976|ref|ZP_04260840.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST196]
gi|228651480|gb|EEL07451.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST196]
Length = 323
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 179/325 (55%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V +QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 VKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|15806153|ref|NP_294857.1| uroporphyrinogen decarboxylase [Deinococcus radiodurans R1]
gi|6458871|gb|AAF10707.1|AE001963_2 uroporphyrinogen decarboxylase [Deinococcus radiodurans R1]
Length = 392
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 13/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L+ +G P+W MRQAGRY+PEYR +R K L+ TP+ E+TLQPI
Sbjct: 50 RDSAFLKTARGEQAPYTPVWFMRQAGRYMPEYRALRAG-KTMLECIRTPDLAAEITLQPI 108
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLN-PNIDLFLNYL 120
+ DAAILF+DIL +G ++ FV GP + +PI T +++ +L P + Y
Sbjct: 109 KAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVLGVPATAETMPY- 167
Query: 121 LPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+SI +L +L + I LIGF GAP+T+ASY I G +++ + + F Y A+
Sbjct: 168 --TAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWAR 225
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ V A+YL Q+ AG +QIFD+ G L ++++ + + +I V++
Sbjct: 226 LMGKFESVLADYLTEQVKAGASAVQIFDSWVGALSVYDYQTFVKPATAGLIERVKKL--G 283
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F GA +++ + L S+ +G DW PL A +L + G +QGNLDP+ L
Sbjct: 284 VPVIYFGTGATHLMPDMASL-GSDVMGADWRTPLDKAWDLIQPGQSIQGNLDPLLLQAPW 342
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + IL P IFN+GHG+ P+ V L V +
Sbjct: 343 RELKHQTDRILHEANGRPGHIFNVGHGLLPETPQDMVHRLTDYVHEQ 389
>gi|255559645|ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
gi|223539973|gb|EEF41551.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
Length = 389
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 187/347 (53%), Gaps = 21/347 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQP +
Sbjct: 51 LLNAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWNVFK 110
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL----LP 122
D ILFSDIL + V+ +GP + +P+ T E ++D ++ +P
Sbjct: 111 PDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPLRTAE------DVDQVREFVPEESVP 164
Query: 123 -IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +S++ILRK++ N ++GF GAP+T+ASY + GG K + + A+ + LL
Sbjct: 165 YVGESLTILRKEVDNKAAVLGFVGAPFTLASYCVEGGSSKHFSKIKRLAFSQPEVLHALL 224
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ A+Y+ Q G +QIFD+ A L +FE ++ + +I+ V++ +PN
Sbjct: 225 QKFATSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEQFSLPYLKQIVDTVKKTHPNLP 284
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGN 298
I +A G+G +L+ LT + + LDW+V A ++ GP VQGN+DP L
Sbjct: 285 LILYASGSGGLLERL-ALTGVDVVSLDWTV--DMAEGRRRLGPDMAVQGNVDPGVLFGSK 341
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + + +N ++ G G I NLGHGI TP+ + + ++ K +R
Sbjct: 342 EFITNRINDVVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIR 388
>gi|8928071|sp|Q9RV96|DCUP_DEIRA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 344
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 13/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L+ +G P+W MRQAGRY+PEYR +R K L+ TP+ E+TLQPI
Sbjct: 2 RDSAFLKTARGEQAPYTPVWFMRQAGRYMPEYRALRAG-KTMLECIRTPDLAAEITLQPI 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLN-PNIDLFLNYL 120
+ DAAILF+DIL +G ++ FV GP + +PI T +++ +L P + Y
Sbjct: 61 KAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVLGVPATAETMPY- 119
Query: 121 LPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+SI +L +L + I LIGF GAP+T+ASY I G +++ + + F Y A+
Sbjct: 120 --TAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWAR 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ V A+YL Q+ AG +QIFD+ G L ++++ + + +I V++
Sbjct: 178 LMGKFESVLADYLTEQVKAGASAVQIFDSWVGALSVYDYQTFVKPATAGLIERVKKL--G 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F GA +++ + L S+ +G DW PL A +L + G +QGNLDP+ L
Sbjct: 236 VPVIYFGTGATHLMPDMASL-GSDVMGADWRTPLDKAWDLIQPGQSIQGNLDPLLLQAPW 294
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + IL P IFN+GHG+ P+ V L V +
Sbjct: 295 RELKHQTDRILHEANGRPGHIFNVGHGLLPETPQDMVHRLTDYVHEQ 341
>gi|229056802|ref|ZP_04196203.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH603]
gi|228720543|gb|EEL72109.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH603]
Length = 323
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 179/325 (55%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
V +QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 VKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|195629468|gb|ACG36375.1| hypothetical protein [Zea mays]
Length = 374
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 166/305 (54%), Gaps = 5/305 (1%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R + D ILFSDIL
Sbjct: 59 PPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFAPDGVILFSDILT 118
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++GP + P+ ++E IDL + L + +S+ ILR ++
Sbjct: 119 PLPAIGVPFDISDSKGPVIQSPVRSKEQVRELVPIDL--DMLQFVGESLKILRNEIDGKA 176
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L+ ++Y+I Q+++
Sbjct: 177 ALLGFVGAPWTIATYIVEGGMTNTYTNIKSMCHTAPDVLKGLLSHLAQAISDYIIYQVNS 236
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQIFD+ G L H +E ++ + +I+S ++++ PN + + G G +L+ +
Sbjct: 237 GAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPNVPLVLYINGNGGLLERMKN 296
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
T ++ IGLDW+V ++ G VQGN+DP L V+ D ++ ++ G
Sbjct: 297 -TGADVIGLDWTVDMTDGRRRLGNGISVQGNVDPAFLFSPLPVLTDEIHRVVKAAGPKGH 355
Query: 318 IFNLG 322
I NLG
Sbjct: 356 ILNLG 360
>gi|229108634|ref|ZP_04238245.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-15]
gi|228674775|gb|EEL30008.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-15]
Length = 323
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 177/316 (56%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVVDYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|73977146|ref|XP_861894.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 5 [Canis familiaris]
Length = 346
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 167/345 (48%), Gaps = 30/345 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRAA-QDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ + + + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG +Q+F++HAG LG F +A V + V+ + A
Sbjct: 173 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGL 232
Query: 243 -----ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 233 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 291
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 292 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 336
>gi|225849334|ref|YP_002729498.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643957|gb|ACN99007.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 349
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 190/348 (54%), Gaps = 12/348 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + L+ + I PIWLMRQAGRY+ EYR++R+K +F + + VE +L
Sbjct: 1 MNLKNDLFLKACKNQKIERTPIWLMRQAGRYMKEYRELREKAGSFKNFYKNVDLAVEASL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLN 118
P + + DA I+FSDIL +++G F E EGP + PI + +++ L P ++
Sbjct: 61 LPKKILDVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKSVEDVENLKPFNTEDVH 120
Query: 119 YLLPIFQSIS-ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y+ I + ++ L ++LP +IGF GAP+T+A+YMI G +D + + F Y N + F
Sbjct: 121 YVGEIIKGVNQTLNRELP----VIGFAGAPFTLAAYMIEGRGSRDFKKAKKFMYDNPQEF 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LLD ++DV +YL QI +G D +QIFD+ AG L +++ +A + +II +++ Y
Sbjct: 177 KKLLDIIADVIIDYLNFQIKSGADAVQIFDSWAGHLSPKDYKEFALPPIKKIIKNLKKDY 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVV 296
I F+KG ++ ++ + ++ +DW V + ++ VQGNLDP L
Sbjct: 237 --QPVIHFSKGVAGVI-DFIGESGADVYSVDWMVDIKDVKNKIYPNAAVQGNLDPTILYA 293
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL+ G IFNLGHG+ P +D + V LV TV+
Sbjct: 294 EKNAIKKEAEYILESWGKDSGHIFNLGHGLNPDMDVEKVKYLVDTVKE 341
>gi|311067501|ref|YP_003972424.1| uroporphyrinogen decarboxylase [Bacillus atrophaeus 1942]
gi|310868018|gb|ADP31493.1| uroporphyrinogen decarboxylase [Bacillus atrophaeus 1942]
Length = 351
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 183/344 (53%), Gaps = 20/344 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L+ +G + P+W MRQAGR PEYR +++K+ +++ + PE +T P+ +
Sbjct: 7 ETLLKAARGGKADHVPVWYMRQAGRSQPEYRALKEKY-GLVEITHQPELCAYVTRLPVEQ 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYL 120
Y DAAIL+ DI+ +G +V GP +D P+ + +++ +L P D+
Sbjct: 66 YGVDAAILYKDIMTPLPYIGVDVEIKNGIGPVIDNPVRSLQDIEKLGVLEPEQDVPY--- 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +L + N + LIGF GAP+T+ASYMI GG K++ + + F Y A+N L
Sbjct: 123 --VLETIRLLVNEQLN-VPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNQL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L+D+ Y AQI AG QIFD+ G L + ++ Y + RI + + + N
Sbjct: 180 MNKLADMIIVYAKAQIKAGAKAFQIFDSWVGALNQADYRTYIKPVMNRIFTELADQ--NV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I GA ++ ++ L N +GLDW + + A VQGNLDP L+ V
Sbjct: 238 PLIMHGVGASHLASDWHDLP-LNVVGLDWRLGVDEARAQGITKTVQGNLDPSILLAPWDV 296
Query: 301 MIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD + S FIFNLGHG+ P V P D++K + S
Sbjct: 297 IEKKAKDILDQGMKSDSFIFNLGHGVFPDVSP----DVLKKLTS 336
>gi|222151795|ref|YP_002560953.1| uroporphyrinogen decarboxylase [Macrococcus caseolyticus JCSC5402]
gi|222120922|dbj|BAH18257.1| uroporphyrinogen decarboxylase [Macrococcus caseolyticus JCSC5402]
Length = 324
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKI-KETHSLFEITHDPELCAYVTKLPVDQYNTDAAILYKDIMSPLGAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ ++P D+ Y+L + ++ + +P
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSKADVEKLGEIHPEQDV--PYILDTIKLLTTEQLNVP---- 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG K++ + + Y+ A++ L+D L+D+ Y AQI AG
Sbjct: 114 LIGFTGAPFTLASYMIEGGPSKNYNKTKAMMYEAPEAWHLLMDKLADMCITYTHAQIDAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+IQ+FD+ G L ++ + A + RI ++ K +F GA ++++ + L
Sbjct: 174 CKMIQVFDSWVGALNRADYHTFIAPHMERIFKEIKAK--GVPVTTFGVGASHLIEEWNAL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV-LGSGPFI 318
+ +GLDW + + A +L +QGNLDP L+ +V+ + ILD L S +I
Sbjct: 232 P-VDVLGLDWRLQIEEARQLGITKTLQGNLDPAILMAPWEVIESHLKRILDQGLQSNSYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V P +
Sbjct: 291 FNLGHGVFPEVQPDTL 306
>gi|224117002|ref|XP_002331805.1| predicted protein [Populus trichocarpa]
gi|222874501|gb|EEF11632.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G ++ PP W+MRQAGRY+ YR++ +K+ +F + T + VE++LQP ++
Sbjct: 5 LVKAAKGEPVSRPPAWMMRQAGRYMAVYRKLAEKYPSFRERSETTDLIVEISLQPWEAFH 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E GP + PI ++E + L+P + L L +
Sbjct: 65 PDGVIIFSDILTPLPAFGVPFDIEEVRGPVIQSPIRSEEGLKALHP---IELEKLQFLGD 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR ++ ++GF GAPWT+A+Y++ GG + + + + + LL L+
Sbjct: 122 SLRILRNEVEGRAAVLGFVGAPWTIATYIVEGGTTRTYTNIKSMCHTAPQVLRALLSHLT 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++Y++ Q+ +G IQIFD+ G L ++ ++ + I+S VR K P + +
Sbjct: 182 KAISDYIVFQVESGAHCIQIFDSWGGQLPPDMWDRWSKPYIEEIVSTVRNKCPETPLVLY 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T + IGLDW+V L+ + G VQGN+DP L + D
Sbjct: 242 INGNGGLLERMKG-TGVDVIGLDWTVDLADGRKRLGSGISVQGNVDPAYLFSPLPALTDE 300
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G I NLGHG+ + V + RS
Sbjct: 301 IQRVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARS 339
>gi|47567548|ref|ZP_00238259.1| uroporphyrinogen decarboxylase [Bacillus cereus G9241]
gi|47555743|gb|EAL14083.1| uroporphyrinogen decarboxylase [Bacillus cereus G9241]
Length = 323
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 176/316 (55%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARTRGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|229154746|ref|ZP_04282861.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 4342]
gi|228628694|gb|EEK85406.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 4342]
Length = 323
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 176/316 (55%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|159487621|ref|XP_001701821.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
gi|158281040|gb|EDP06796.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
Length = 398
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 175/334 (52%), Gaps = 9/334 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G P+WLMRQAGRY+ +R+ K+ F TPE +EL+LQP+R +
Sbjct: 44 LLRVARGEDAERTPVWLMRQAGRYMAAFREYSDKYP-FRMRSETPEIAIELSLQPLRAFR 102
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQ 125
D I FSDIL +G V+ +GP + +P+ +T+ + L P D LP
Sbjct: 103 PDGIIFFSDILTPLPGMGIEFDMVKGKGPVIANPMRSTEHLKQLTPLSDPASR--LPFIN 160
Query: 126 SI-SILRKKL-PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I S LRK+ N +TL+GF G PWT+A+Y + G KD + + + N + LDF
Sbjct: 161 TILSTLRKEADSNGVTLLGFIGTPWTLAAYSMEGKADKDCKETKKIMFHNPALLHSFLDF 220
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ Y QI +G VIQ+FD+ A L +F ++ + RI A++ KYP+ I
Sbjct: 221 LTEQLIVYAGYQIESGAQVIQLFDSWAHHLSPAQFTEFSLPYMERITVALKAKYPHVPVI 280
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
A G L+ R + ++ IGLDW+V + A + VQGN+DPM L +V+
Sbjct: 281 MHANGGTGKLELMRE-SAADVIGLDWAVDMKDARQQLAGKRVQGNVDPMSLFGPEEVIRA 339
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
V L G I N+GHG+ Q P++ + L
Sbjct: 340 EVERCLRAAGPRGHILNVGHGVV-QGTPESSVAL 372
>gi|196044232|ref|ZP_03111468.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB108]
gi|206976592|ref|ZP_03237498.1| uroporphyrinogen decarboxylase [Bacillus cereus H3081.97]
gi|222094800|ref|YP_002528860.1| uroporphyrinogen decarboxylase [Bacillus cereus Q1]
gi|229137862|ref|ZP_04266461.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST26]
gi|196024871|gb|EDX63542.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB108]
gi|206745275|gb|EDZ56676.1| uroporphyrinogen decarboxylase [Bacillus cereus H3081.97]
gi|221238858|gb|ACM11568.1| uroporphyrinogen decarboxylase [Bacillus cereus Q1]
gi|228645519|gb|EEL01752.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST26]
Length = 323
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 178/325 (54%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|299537562|ref|ZP_07050855.1| uroporphyrinogen decarboxylase [Lysinibacillus fusiformis ZC1]
gi|298726931|gb|EFI67513.1| uroporphyrinogen decarboxylase [Lysinibacillus fusiformis ZC1]
Length = 349
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 188/348 (54%), Gaps = 13/348 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G I P+W MRQAGR PEYR I++K+ + ++ + PE +T
Sbjct: 1 MTTFNDTLLRAARGERIAHTPVWYMRQAGRSQPEYRAIKEKY-SLEEITHQPELCAYVTR 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNP-NIDLFL 117
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + ++ L N
Sbjct: 60 LPVENYNVDAAILYKDIVTPLPGIGIDVKIKAGVGPVISNPIRSVADVEKLGEFNAKEHT 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
++L ++I +L ++ N + LIGF GAP+T+ASYMI GG +++ + + F +A+
Sbjct: 120 PFVL---ETIKLLAEEQLN-VPLIGFAGAPFTLASYMIEGGPSRNYNKTKSFMVSEPQAW 175
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D L+D+ + AQI AG IQ+FD+ G L ++ + + RI + ++++
Sbjct: 176 FALMDKLADMIIADVTAQIKAGAKAIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE- 234
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F GA +++K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 235 -NVPLIQFGVGASHLVKEWNDLP-IDVVGLDWRLPIKDARANGITKPVQGNLDPSLLLAD 292
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ I+D P IFNLGHG+ P+VDP +VL + T+ E
Sbjct: 293 WSVIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDP-DVLKRLTTLIHE 339
>gi|190566523|ref|ZP_03019440.1| uroporphyrinogen decarboxylase [Bacillus anthracis Tsiankovskii-I]
gi|227816079|ref|YP_002816088.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CDC 684]
gi|190562075|gb|EDV16043.1| uroporphyrinogen decarboxylase [Bacillus anthracis Tsiankovskii-I]
gi|227005079|gb|ACP14822.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CDC 684]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 178/325 (54%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|254431209|ref|ZP_05044912.1| uroporphyrinogen decarboxylase [Cyanobium sp. PCC 7001]
gi|197625662|gb|EDY38221.1| uroporphyrinogen decarboxylase [Cyanobium sp. PCC 7001]
Length = 352
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 178/347 (51%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++
Sbjct: 1 MAETAPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLN 118
QP R + D ILFSDIL +G + +E++GP ++P T ++ L P L
Sbjct: 61 QPFRAFQPDGVILFSDILTPLPGMGIDFDIIESKGPIIEPAIRTRAQVDALRP---LNPA 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
LP + + + LR + N ++GF GAPWT+A+Y + G K + + A+Q
Sbjct: 118 EALPFVGEVLGRLRADVGNAAAVLGFVGAPWTLAAYAVEGKSSKTYAVIKAMAFQEPALL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL L+D A Y+ QI +G V+Q+FD+ AG L +++ +AA R+I V+ +
Sbjct: 178 HQLLGHLADSIATYVRYQIDSGAQVVQLFDSWAGQLSPIDYDVFAAPYQKRVIDQVKATH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ I + G+ +L+ R T + + LDW+V ++ L + VQGN+DP L
Sbjct: 238 PDTPLILYISGSAGVLERMGR-TGVDIVSLDWTVDMADGCARLPQHVGVQGNVDPGLLFG 296
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + + + S I NLGHGI P N +T ++
Sbjct: 297 SPEAIRERILDTVRKARSRRHILNLGHGILPGTPEDNARVFFETGKA 343
>gi|154508273|ref|ZP_02043915.1| hypothetical protein ACTODO_00769 [Actinomyces odontolyticus ATCC
17982]
gi|153797907|gb|EDN80327.1| hypothetical protein ACTODO_00769 [Actinomyces odontolyticus ATCC
17982]
Length = 365
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 175/354 (49%), Gaps = 40/354 (11%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
P P+W MRQAGR LPEYR++R L+ C P+ E T+QP+RR+ DA I FSD
Sbjct: 15 GPTPVWFMRQAGRSLPEYRELRADVGLPMLEACLRPDVAAEATVQPVRRHGVDAGIFFSD 74
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY---------------- 119
I+V G V GP +D P T+E +ID L++
Sbjct: 75 IMVPLRLAGVGVEIEPGVGPVLDHPYRTRE------SIDELLSHRYGEGSWTDSTGRARD 128
Query: 120 ----LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ ++L +LIGF GAP+T+A+YM+ G +DH R A +
Sbjct: 129 CAEGAQSVRDGVATAVREL-GSTSLIGFGGAPFTLAAYMVEGRPSRDHMAARSLAASDPG 187
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF-ENYA------ARSVGR 228
A++ L+++ + VSA+++ AQI AG Q+FD+ G L + E+ A A+ V
Sbjct: 188 AWDALMNWCAWVSADFITAQIEAGASAAQLFDSWVGSLSPRTYRESVAPYSRLVAQRVAG 247
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+S V + A I F G+ +L + + + +G+DW LS+A+ VQGN
Sbjct: 248 AVSPVTGE--RAPLIHFGTGSAPILADMAEV-GVDCVGVDWKTDLSWAVTQVPGKAVQGN 304
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LDP L V+ V ILD S P +FNLGHG+ P DP + +V+ V
Sbjct: 305 LDPALLQAPWHVIEQAVRDILDAGRSAPGHVFNLGHGVPPTTDPDVLTRIVELV 358
>gi|145355394|ref|XP_001421947.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582186|gb|ABP00241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 321
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 170/323 (52%), Gaps = 9/323 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ EYR + K +F + T + E+TLQP R + D ILFSDIL A
Sbjct: 1 MMRQAGRYMKEYRDVAVKHPSFRERSETTDLICEITLQPFRAFQPDGVILFSDILTPFPA 60
Query: 84 LGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
G + + +GP ++ + +++ +L+ ++ L+ + + S+ ILR+++ + ++
Sbjct: 61 FGIDFEIDDYKGPMLEKTIRSAEDLKMLH---EVDLSKVEFVADSLKILRQEVGDEAAVL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAPWT+ +Y++ G + + + N + LL ++D A Y+ QI AG
Sbjct: 118 GFVGAPWTLCTYIVEGQSTSTYKTIKSMCFNNPEVLHKLLSAVADALAVYVGFQIDAGAQ 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
VIQ+FD+ G L H +E ++ + R++ V + +P +A G+G +L+ L
Sbjct: 178 VIQVFDSWGGQLPPHMWEEWSKPYIERVVRKVNQTHPGVPITMYANGSGGLLERMATLP- 236
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ IGLDW++ + + VQGN+DP+ L G + V + G I NL
Sbjct: 237 VDTIGLDWTIDMEDGRRRVGDKAVQGNVDPVVLFAGEDAIEKAVRDVCRKAGPTGHILNL 296
Query: 322 GHGI---TPQVDPKNVLDLVKTV 341
GHG+ TP+ K+ D+ KT+
Sbjct: 297 GHGVLVGTPEESVKHFFDVSKTI 319
>gi|21224363|ref|NP_630142.1| uroporphyrinogen decarboxylase [Streptomyces coelicolor A3(2)]
gi|256784451|ref|ZP_05522882.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
gi|289768330|ref|ZP_06527708.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
gi|6014940|sp|O69861|DCUP_STRCO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3169045|emb|CAA19243.1| uroporphyrinogen decarboxylase [Streptomyces coelicolor A3(2)]
gi|289698529|gb|EFD65958.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
Length = 355
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 175/330 (53%), Gaps = 16/330 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+RR+ DAA+ FSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVAEITLQPVRRHGVDAAVYFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +PI T+ ++ L DL + + ++ +L ++L
Sbjct: 92 LKAIGIDLDIKPGVGPVIAEPIRTRADLARLR---DLTPEDVAYVTEAFGLLTREL-GAT 147
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + Y + + + LLD L+ ++A +L QI A
Sbjct: 148 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPQLWADLLDRLAGITAAFLKVQIEA 207
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G L
Sbjct: 208 GASAVQLFDSWVGALSPADYRRSVLPASRKVFEAVSGY--GVPRIHFGVGT-GELLGLLG 264
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + +LD G
Sbjct: 265 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAGREAVETKTREVLDAATGL 322
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P DP + LV+ V ++
Sbjct: 323 EGHVFNLGHGVLPTTDPDALTRLVEYVHTQ 352
>gi|83767798|dbj|BAE57937.1| unnamed protein product [Aspergillus oryzae]
Length = 378
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 26/327 (7%)
Query: 27 QAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADAL 84
+AGRYLPEY + K ++F + C +PE LT+QP+ RY DAAI+FSDILVI A+
Sbjct: 47 RAGRYLPEYHEA-KGGRDFFECCRSPEIASTLTIQPVERYAGLIDAAIIFSDILVIPQAM 105
Query: 85 GRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNH 137
G V V+ +GP P Q ++ +D+ L+Y ++++I + R KL
Sbjct: 106 GMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKQVDVKEELDY---VYKAIRLTRHKLQGR 162
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGFCGAPWT+ YM+ GG K Q++ + Y+ + LL ++++ EYL Q+
Sbjct: 163 VPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWVYKYPKESQALLQKIAEICVEYLALQVA 222
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYM 252
AG ++Q+FD+ AG L F++++ + I + + ++ FAKGA Y
Sbjct: 223 AGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPKRLKEMGLEPVPMTVFAKGAWYA 282
Query: 253 LKNYRRLTDS--NAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
L + L +S N +GLDW + A + +QGN DP L G + + V ++
Sbjct: 283 LDD---LCESGYNVVGLDWLHDPAEARRIANGRVTIQGNADPGMLYGGRAAITETVETMV 339
Query: 310 DVLGSGP--FIFNLGHGITPQVDPKNV 334
G +I NLGHG+TP V P ++
Sbjct: 340 KGFEKGKQGWIANLGHGVTPFVKPDDL 366
>gi|296118426|ref|ZP_06837005.1| uroporphyrinogen decarboxylase [Corynebacterium ammoniagenes DSM
20306]
gi|295968567|gb|EFG81813.1| uroporphyrinogen decarboxylase [Corynebacterium ammoniagenes DSM
20306]
Length = 325
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 167/332 (50%), Gaps = 20/332 (6%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR R+ LD C+ PE E+TLQP+RR++ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRTAREGI-TMLDSCFMPELLAEITLQPVRRHDVDAAILFSDIVVPLRAA 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V GP MD P+ T+ N+ + ++ + I I+ +L + LIGF
Sbjct: 60 GIGVDIVAGRGPVMDKPVRTRSDI---DNLPILDEHVDEVADGIRIILDELTDTQALIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG K+H + + + ++ L+ L +L QI AG+D +
Sbjct: 117 VGAPFTLASYLVEGGPSKNHEKTKALMHSEPETWHALMKRLVPTIINFLDVQIDAGIDAM 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ AG L ++ Y +I+ V+ P I F G G +L S
Sbjct: 177 QLFDSWAGYLNREDYRKYVLPYSTQILDHVQGVVPR---IHFGVGTGELLPAMAE-AGSE 232
Query: 264 AIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--- 316
+G+D+ V + A E +QGNLDP L G+ + V +I D + +
Sbjct: 233 VMGVDYRVRMDEAAERIHAAHGAHALQGNLDPAMLFAGDDAVRQAVRSIRDQVATAQQAG 292
Query: 317 ----FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+NLGHG+ P + + + V + E
Sbjct: 293 HATGHIWNLGHGVLPTTEAEAITRAVAIIHEE 324
>gi|326332252|ref|ZP_08198532.1| uroporphyrinogen decarboxylase [Nocardioidaceae bacterium Broad-1]
gi|325949958|gb|EGD42018.1| uroporphyrinogen decarboxylase [Nocardioidaceae bacterium Broad-1]
Length = 360
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 175/339 (51%), Gaps = 8/339 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L G + P+W MRQAGR LPEY ++R+ L+ C E E+TLQP+RRY
Sbjct: 20 LQALAGQKPSRTPVWFMRQAGRSLPEYLKVREGI-GMLESCQNAELITEITLQPVRRYGV 78
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL-FLNYLLPIFQS 126
DAAI FSDI++ A+G ++ GP + DP+ T P++ + Y+ Q+
Sbjct: 79 DAAIFFSDIVLPLKAVGVDLEIKPGVGPVVADPVRTMADVEAIPDLTPEHVPYITEAVQN 138
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ + LIGF GAP+TVASY++ GG K++ + + + ++ L+ ++
Sbjct: 139 LTGELAGINGGTPLIGFAGAPFTVASYLVEGGPSKEYAKTKALMFGAPDVWDALMRKIAG 198
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+SA +L Q+ AG +Q+FD+ AG ++E + ++S + I F
Sbjct: 199 ISAAFLEVQVRAGASAVQLFDSWAGACTPADYERHVLPHSTAVLSRIGEL--GVPRIHFG 256
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
+ ML + +G+DW PL +A++ +G VQGNLDP + VM++
Sbjct: 257 VNSA-MLLPLMGSAGAEVVGVDWRTPLDWAIDQLGDGFGVQGNLDPALVFAPTDVMLEQA 315
Query: 306 NAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I++ + +FNLGHG+ P DP + L + V+S
Sbjct: 316 GRIIETGRRAKGHVFNLGHGVIPSTDPDQLARLTEFVQS 354
>gi|159037110|ref|YP_001536363.1| uroporphyrinogen decarboxylase [Salinispora arenicola CNS-205]
gi|157915945|gb|ABV97372.1| uroporphyrinogen decarboxylase [Salinispora arenicola CNS-205]
Length = 365
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 177/328 (53%), Gaps = 18/328 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+IR + L+ C P+ E+TLQP+RR+ DAAILFSDI+V
Sbjct: 38 PVWFMRQAGRSLPEYRKIRSEVA-MLESCRRPDLITEITLQPVRRHKVDAAILFSDIVVP 96
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A G + V GP + DP+TT + I L++ + +++ +++ +L +L
Sbjct: 97 VAAAGVALDIVPGTGPVVTDPVTTRADVERIRLIDRDDVHYVD------EAVRMLVDEL- 149
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAP+T+ASY++ GG + H + + Y + ++ L L++++ +L Q
Sbjct: 150 GGTPLIGFAGAPFTLASYLVEGGPSRTHVRTKALMYGDPDLWHALAGRLAEMTLAFLKVQ 209
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AGV +Q+FD+ AG L E ++ Y +++ + I F G G ++
Sbjct: 210 IDAGVSAVQLFDSWAGALSEADYRRYVLPHSRAVLAGLADA--GVPRIHFGVGTGELIAA 267
Query: 256 YRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++ +G+DW PL A + E VQGNLDP L V+ V +L +
Sbjct: 268 MGE-AGADVVGVDWRTPLDVATRRIGPERAVQGNLDPCLLFAPWPVIEAEVRRVLAQGRA 326
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P IFNLGHG+ P+ DP+ + +V V
Sbjct: 327 APGHIFNLGHGVLPETDPEVLTRVVALV 354
>gi|116624284|ref|YP_826440.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
gi|122253030|sp|Q01W10|DCUP_SOLUE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116227446|gb|ABJ86155.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
Length = 345
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 178/327 (54%), Gaps = 11/327 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY+ +YRQIR+K L++C P+ +TLQPI + DAAI+F+D+L+
Sbjct: 23 PVWFMRQAGRYMKQYRQIREK-HGILEICKRPDLAATVTLQPIEVLDVDAAIIFADLLLP 81
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+ +G +++ + EGP + +P+ T+ ++ L+ L Y + ++I + + L +
Sbjct: 82 IEPMGLKLKYEKGEGPVIGNPVRTSDDVDSLSTTNTDELGY---VGEAIQHVVRALAGKV 138
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
++GF GAP+T+ASYMI GG ++ + + Y + + L+ + DV A + +Q+ A
Sbjct: 139 PVVGFVGAPFTMASYMIEGGASRNFVRTKKLMYSDETLWRRLMGKIVDVLAPFAHSQVAA 198
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G IQ+FD+ G LG ++ +AA +I +R I F GA +
Sbjct: 199 GARAIQVFDSWVGALGSDDYVRFAAPYSRALIERIRST--GVPVIHFGTGASGFFREL-H 255
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
+ +G+DW + + A +++ +QGNLDP+ L + V +L G+ P
Sbjct: 256 AAGGDVMGVDWRINIDQAWMDISYRSAIQGNLDPVALFAPLPELRTKVQELLKRTGTRPG 315
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P+ +NV +V+ VR
Sbjct: 316 HIFNLGHGILPETPVENVKAVVELVRE 342
>gi|170077445|ref|YP_001734083.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7002]
gi|238058172|sp|B1XIF6|DCUP_SYNP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169885114|gb|ACA98827.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7002]
Length = 350
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 17/346 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGRY+ YR +R+K+ +F + P+ +E++LQP +
Sbjct: 10 LLRAARGEKVERTPVWMMRQAGRYMKIYRDLREKYPSFRERSENPDLAIEISLQPWHAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G +E++GP ++ PI TQ ++ + P LP +
Sbjct: 70 PDGVIMFSDILTPLPGMGIPFDIIESKGPIIENPIRTQAQVDAMTP---FDPAESLPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y I G K++ + A+ + L +
Sbjct: 127 TILGTLRQEVGNASTVLGFVGAPWTLAAYAIEGKSSKNYAIIKNMAFSEPAVLHSFLGKI 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A+Y+ QI G VIQ+FD+ AG L +++ +A R++ V+ KYP+ I
Sbjct: 187 ADAIADYVCYQIECGAQVIQMFDSWAGQLSPQDYDMFALPYQKRVVDKVKAKYPDFPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW+V ++ A + L K+ VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGK-SGVDIVSVDWTVDMADARQRLGKDMKVQGNIDP-GVLFGSQDFIK 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGI---TPQVDPKNVLDLVKTVRS 343
I+D + G+ I NLGHG+ TP+ + + + K V+S
Sbjct: 305 A--RIIDTVRKAGNWGHILNLGHGVLVGTPEDNVRFFFETCKNVQS 348
>gi|126136855|ref|XP_001384951.1| uroporphyrinogen decarboxylase [Scheffersomyces stipitis CBS 6054]
gi|126092173|gb|ABN66922.1| uroporphyrinogen decarboxylase [Scheffersomyces stipitis CBS 6054]
Length = 362
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 27/355 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PPIW+MRQAGRYLPEY + + ++F + C E E+T+QP+ ++
Sbjct: 12 ILRAARGEKVERPPIWIMRQAGRYLPEYHEAKGN-RDFFETCRDAEIASEITIQPVNHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITT-QEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI A+G + +E +GP + P+ + ++ +N D+ L L
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFEIEMLEGKGPVFVAPLRSPDDLARVNFQPDV-LKSLDWA 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+SI++ R KL + L+GF GAPWT+ YM G K + + Y+ + + LL
Sbjct: 130 FKSITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFVKEWIYKYTEESHKLLQA 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY--------AARSVGRIIS-AVR 234
++D E+L Q+ AG ++Q+F++ AG LG EF+ + A + R++ V
Sbjct: 190 ITDACVEFLAQQVVAGAQMLQVFESWAGELGPREFDEFSLPYLRQIAEKLPKRLVELGVT 249
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
K P FAKGA Y L + L +S + + LDW A+++ + +QGNLD
Sbjct: 250 EKIP---LTVFAKGAWYALDD---LCESGYDTVSLDWLYKPEDAVKVVNNRRITLQGNLD 303
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P + ++V+ V ++ G G +I N GHG P + P+ + +K
Sbjct: 304 PGIMYGSDEVISQKVEEMIKGFGGGKQNYIINFGHGTHPFMKPEKIEHFLKECHK 358
>gi|307106771|gb|EFN55016.1| hypothetical protein CHLNCDRAFT_48884 [Chlorella variabilis]
Length = 347
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 174/339 (51%), Gaps = 8/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G I P W+MRQAGRY YR + K +F + + VE++LQP + +
Sbjct: 1 MVRAARGEAIERAPCWMMRQAGRYQKAYRDLALKHPSFRERSENTDLIVEISLQPWQSFT 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL A G +N+GP +D PI + E IDL L + +S
Sbjct: 61 PDGVIIFSDILTPLPAFGIPFEIDDNKGPLLDNPIRSTEQLKQLHAIDL--QQLSFVGES 118
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ++R+++ ++GF G PWT+A+Y++ G + + + + + LL ++D
Sbjct: 119 LGLIRQEVAGRAAVLGFVGCPWTLATYVVEGASSSIYKNIKTMMFNEPQLLDSLLSHIAD 178
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
AEY+ QI +G D I +FD+ G L +++ ++ V RI+ V+ +P +A
Sbjct: 179 QIAEYVKFQIDSGADCIMMFDSWGGQLPPKQWDRWSRPYVERIVRQVKATHPRTPLTLYA 238
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
G+G ML+ + T ++ IGLDW+V ++ A G VQGN+DP+ L + + V
Sbjct: 239 NGSGGMLERMGQ-TGADVIGLDWTVDMADARRRLGAGVAVQGNVDPVVLFGSEAAIEEAV 297
Query: 306 NAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
L G G I NLGHG+ TP+ + DL K +
Sbjct: 298 RDCLTKAGEGGHILNLGHGVLVGTPEESVAFMFDLSKKL 336
>gi|296394324|ref|YP_003659208.1| uroporphyrinogen decarboxylase [Segniliparus rotundus DSM 44985]
gi|296181471|gb|ADG98377.1| uroporphyrinogen decarboxylase [Segniliparus rotundus DSM 44985]
Length = 362
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 162/334 (48%), Gaps = 25/334 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R ++ L+ C PE E+TLQP+RR+ DAAILFSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYRALRAG-RDMLETCLDPELVCEITLQPLRRHGVDAAILFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G V GP +D P+ +Q ++ L P L H
Sbjct: 93 LKTAGVGVTIKPGVGPVLDAPVGSQADVDALPPASTEGLEP----VAKAVKALVAALGHT 148
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG K+H + + F LL L+D++ +L Q+ A
Sbjct: 149 PLIGFAGAPFTLASYLVEGGPSKNHAKTKALMTGAPDVFAALLSKLADLTVSFLRVQLAA 208
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF----ISFAKGAGYMLK 254
GVD +Q+FD+ AG L ++E + R+ + + A F I F G++L
Sbjct: 209 GVDAVQVFDSWAGALSLADYERHVLPHTRRVFAEI------ADFGVPGIHFGVNTGHLLG 262
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVM------IDGVNA 307
+ IG+DW PL A G V QGNLDP L+ + +
Sbjct: 263 ATAG-CGARVIGVDWRTPLVDAARAVGSGLVLQGNLDPALLLAPRPALEAQTRRVLADAD 321
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G+ IFNLGHG+ P+ DP + +V V
Sbjct: 322 AALAAGAAGHIFNLGHGVLPETDPDALTAVVDIV 355
>gi|251796117|ref|YP_003010848.1| uroporphyrinogen decarboxylase [Paenibacillus sp. JDR-2]
gi|247543743|gb|ACT00762.1| uroporphyrinogen decarboxylase [Paenibacillus sp. JDR-2]
Length = 356
Score = 176 bits (446), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 186/342 (54%), Gaps = 13/342 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ + + +++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+T+ P+R+
Sbjct: 6 RFIRACRKELVDTVPVWYMRQAGRYDPEYRKIKEKY-SLLEICKQPELAAEVTMMPVRKL 64
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNP-NIDLFLNYLLPI 123
DAAIL+SDI+ ++G + V N GP + +PI T ++ L P +++ L ++L
Sbjct: 65 GVDAAILYSDIMNPVASIGIDFDIVANIGPVIHNPIRTAADVERLTPIDVEGDLGHVL-- 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL K+L + LI F GAP+T+ASY+I G K++ + + Y + + L+D
Sbjct: 123 -ETIRILDKEL--EVPLITFAGAPFTIASYLIEGKPSKNYLRTKALMYGEPKVWFSLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + +G Q+FD+ G L +F + ++ RI + + P K
Sbjct: 180 LGDMVIAYLRAHMASGGKAFQLFDSWVGALTPADFSKFVLPTIERIFAEL-SDLPQPKIY 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
+G +L R L ++ IGLDW V + L + VQGNLDP+ L V+
Sbjct: 239 FPGVSSGELLPELRNLK-ADVIGLDWRVSIPEGRRRLDGKYAVQGNLDPVILTAPMSVIE 297
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+D P F+FNLGHG+ P+ + + +L + S
Sbjct: 298 SYAAEIIDQGIQQPGFVFNLGHGLFPEASLEKLTELTAFIHS 339
>gi|327438770|dbj|BAK15135.1| uroporphyrinogen-III decarboxylase [Solibacillus silvestris
StLB046]
Length = 350
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 175/329 (53%), Gaps = 13/329 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W MRQAGR PEYR+I++K+ + ++ PE +T P+ +YN
Sbjct: 8 LLRAARGEQVEHTPVWFMRQAGRSQPEYREIKEKY-SLEEITMQPELCAYVTHLPVEQYN 66
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIF 124
DAAIL+ DI+ +G +V+ GP + +PI + L N Y+L
Sbjct: 67 VDAAILYKDIVTPLPGMGIDVKIKAGIGPVISNPIRSAVDVENLREFNAQEHTPYVLETI 126
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ ++ + +P LIGF GAP+T+ASYMI GG K++ + + F +A+ L++ L
Sbjct: 127 KMLTTEQLNVP----LIGFGGAPFTLASYMIEGGPSKNYAKTKSFMVSQPKAWFALMEKL 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ + AQ+ AG IQIFD+ G L ++ + ++ RI + +R N I
Sbjct: 183 ADMIIVDITAQVEAGAKAIQIFDSWVGALNVEDYRIFIKPTMTRIFAELRAL--NVPLIQ 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F GA +++ + L + +GLDW +P+ A VQGNLDP L+ V+
Sbjct: 241 FGVGASHLINEWHDLP-VDVVGLDWRLPIREAEARGVTKAVQGNLDPTLLLADWNVIEAR 299
Query: 305 VNAILD--VLGSGPFIFNLGHGITPQVDP 331
I+D + +G IFNLGHG+ P+VDP
Sbjct: 300 AKDIVDQGLAHTGGHIFNLGHGVFPEVDP 328
>gi|145346940|ref|XP_001417939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578167|gb|ABO96232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 362
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 185/355 (52%), Gaps = 25/355 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQPIRRY 66
++ +G + P+WL RQAGR+LPEY + +K KNFL++ P+ E+T+QPIRRY
Sbjct: 1 MIRAARGERVERTPVWLFRQAGRHLPEYNEYKKSTGKNFLELLADPKDVAEVTMQPIRRY 60
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEIYLLNPNIDL--FLNY 119
N DAAILFSDILVIA+AL V +G P P ++++ + +ID+ L +
Sbjct: 61 NLDAAILFSDILVIAEALNIEVEMPGGKGILVPNPLRGP---EDMHRVPESIDVNEKLAH 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+L + I++ +K + LIGF APWT+ YM+ G K+ + ++ +
Sbjct: 118 VLASVKEINVQIEKEGLGVPLIGFSAAPWTLMYYMVGGSSRKNTDAGMRWLKEHPKEAQK 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+DV +YL AQ+ AGV ++Q+F+ + E F YA + +I +++++P
Sbjct: 178 LLDILTDVVIDYLDAQVKAGVHMVQVFEAMCEHITEESFYEYAMPCMEKIARELKKRHPT 237
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-------LSFALELQKEGP--VQGNLD 290
+ FA+ A Y L +R + I +D ++ LS E + P VQGN D
Sbjct: 238 VPLLGFARDAPYGLAALQR-AGYDIITIDTAMDRVVARDVLSHDAETRGVQPSGVQGNFD 296
Query: 291 PMRLVVGNQVMIDG----VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
P L +G V +L+ G I NLG G+ + D + V LV ++
Sbjct: 297 PSLLNKEGGSSFEGIEREVTQMLEDFGPQKLIANLGAGLGGKEDVEKVAYLVDSI 351
>gi|229068727|ref|ZP_04202024.1| Uroporphyrinogen decarboxylase [Bacillus cereus F65185]
gi|228714344|gb|EEL66222.1| Uroporphyrinogen decarboxylase [Bacillus cereus F65185]
Length = 323
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 178/325 (54%), Gaps = 16/325 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ I + VR+ I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVADYRVFIKPAMELIFAEVRKM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRS 343
FNLGHG+ P+V+P + L +
Sbjct: 291 FNLGHGVFPEVNPDTLKRLTTFIHE 315
>gi|229095670|ref|ZP_04226651.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-29]
gi|229114623|ref|ZP_04244037.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-3]
gi|228668688|gb|EEL24116.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-3]
gi|228687802|gb|EEL41699.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-29]
Length = 323
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 176/316 (55%), Gaps = 16/316 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ F ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKYSLF-EITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G +V GP +D PI + +++ +NP D+ I +I +L ++ + +
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPEDDVPY-----ILDTIRLLTTEMLD-VP 113
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 114 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 173
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 174 AKAVQIFDSWVGTVNVVDYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 231
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD P +I
Sbjct: 232 P-LDVVGLDWRLPIEEARARGVYKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 290
Query: 319 FNLGHGITPQVDPKNV 334
FNLGHG+ P+V+P +
Sbjct: 291 FNLGHGVFPEVNPDTL 306
>gi|255070353|ref|XP_002507258.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522533|gb|ACO68516.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 391
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 174/334 (52%), Gaps = 14/334 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G + PP+WLMRQAGRY+ E+R+ K+ F TP+ +EL+LQP R +
Sbjct: 35 LLRVARGEQADRPPVWLMRQAGRYMSEFREYSNKY-GFRHRSETPDIAIELSLQPWRAFK 93
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLN--PNIDLFLNYLLPI 123
D I+FSDIL A+G V+ +GP + +P+ TT+++ L + DL L ++ I
Sbjct: 94 PDGVIMFSDILTPLPAIGVEFDVVKGKGPVISNPVRTTEDLNRLKCLDDPDLSLPFIREI 153
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
S LR ++ TL+GF G PWT+A+Y I G + + QN + L
Sbjct: 154 LSS---LRSEVDGKSTLLGFIGTPWTLAAYSIEGRSDRHLLITKQIMNQNPEFLHQYLAH 210
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+DV Y+ QI G V+Q+FD+ A L +F ++ R+I+AV+ KYP+ I
Sbjct: 211 LADVLIVYVCHQIDCGAQVVQLFDSWAHHLSPQQFAEFSLPYSERVIAAVKAKYPDVPLI 270
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQV 300
A G L+ T ++ IGLDWS ++ A + GP +QGN+DPM L
Sbjct: 271 LHANGGVGKLEIMTAST-ADVIGLDWSTDMADARRI--FGPDRVLQGNMDPMYLFADEGR 327
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ V + GSG I N+GHG+ NV
Sbjct: 328 IRREVAQNIAAAGSGKHILNVGHGVVQGTPEANV 361
>gi|302541896|ref|ZP_07294238.1| uroporphyrinogen decarboxylase [Streptomyces hygroscopicus ATCC
53653]
gi|302459514|gb|EFL22607.1| uroporphyrinogen decarboxylase [Streptomyces himastatinicus ATCC
53653]
Length = 361
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 172/329 (52%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQP+RR+ DAAI FSDI+V
Sbjct: 39 PVWFMRQAGRSLPEYRKVREG-TAMLESCMRPDLVTEITLQPVRRHRVDAAIYFSDIVVP 97
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI ++ ++ L P + Y + +++ L +L
Sbjct: 98 LKAIGVDLDIKPGVGPVVERPIRSRADLERLRPLDPDDVKY---VTEAVGSLVGEL-GAT 153
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + Y + + LLD L+D++A +L QI A
Sbjct: 154 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPELWADLLDRLADITATFLKVQIEA 213
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G L
Sbjct: 214 GASAVQLFDSWVGALAPADYRRSVMPASTKVFEAVAGY--GVPRIHFGVGT-GELLGLLG 270
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
++ +G DW VPL A ++ GP +QGNLDP L + + +LD G
Sbjct: 271 EAGADVVGADWRVPLDEA--ARRVGPGKAIQGNLDPAVLFAPTEAVEAKAAEVLDAAQGL 328
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP + LV+ V +
Sbjct: 329 EGHIFNLGHGVLPTTDPDALTRLVEYVHT 357
>gi|16975230|pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 194/354 (54%), Gaps = 21/354 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+N + +L+ ++G + PP+WLMRQAGRY+ Y+ + +K+ F D + VE++L
Sbjct: 8 INATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISL 67
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + + D ILFSDIL + ++ +GP + DP+ T +++ +
Sbjct: 68 QPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAA------DVEKVREF 121
Query: 120 L----LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ +P + ++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+
Sbjct: 122 IPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEP 181
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LL + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ +V+
Sbjct: 182 KVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVK 241
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDP 291
+PN I +A G+G +L+ LT + + LDW+V + A ++ GP +QGN+DP
Sbjct: 242 LTHPNLPLILYASGSGGLLERL-PLTGVDVVSLDWTVDM--ADGRRRLGPNVAIQGNVDP 298
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
L + + + +N + G G I NLGHGI TP+ + + ++ K +R
Sbjct: 299 GVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGLR 352
>gi|126649417|ref|ZP_01721658.1| uroporphyrinogen decarboxylase [Bacillus sp. B14905]
gi|126593742|gb|EAZ87665.1| uroporphyrinogen decarboxylase [Bacillus sp. B14905]
Length = 362
Score = 176 bits (445), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 179/335 (53%), Gaps = 10/335 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G P+W MRQAGR EYR I++K+ + ++ + PE +T
Sbjct: 14 MTTFNDTLLRAARGEKTTHTPVWYMRQAGRSQAEYRAIKEKY-SLEEITHQPELCAYVTR 72
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + + ++ +
Sbjct: 73 LPVENYNVDAAILYKDIVTPLPGIGVDVKIKAGVGPVISNPI--RSVADVDNLGEFNAKE 130
Query: 120 LLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
P + ++I IL ++ N + LIGF GAP+T+ASYMI GG K++ + + F +A+
Sbjct: 131 HTPFVLETIKILTEEQLN-VPLIGFAGAPFTLASYMIEGGPSKNYNKTKSFMVSEPQAWF 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D+ + AQI AG VIQ+FD+ G L ++ + + RI + ++++
Sbjct: 190 ALMDKLADMIIADVTAQIKAGAKVIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE-- 247
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++ K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 248 NVPLIQFGVGASHLAKEWNDLP-IDVVGLDWRLPIKEARANGITKPVQGNLDPSLLLADW 306
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPK 332
V+ I+D P IFNLGHG+ P+VDP+
Sbjct: 307 SVIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDPE 341
>gi|296270235|ref|YP_003652867.1| uroporphyrinogen decarboxylase [Thermobispora bispora DSM 43833]
gi|296093022|gb|ADG88974.1| uroporphyrinogen decarboxylase [Thermobispora bispora DSM 43833]
Length = 345
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 172/328 (52%), Gaps = 18/328 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L C TP+ VE+TLQP+RRY DAAI FSDI+V
Sbjct: 23 PVWFMRQAGRSLPEYRRVREGV-GMLRACATPDLVVEITLQPLRRYAVDAAIFFSDIMVP 81
Query: 81 ADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + PI + I L P + Y + +++S+L K+L +
Sbjct: 82 LKAIGVDLDIQPAIGPVVSSPIRDRAGIAALRPLEPDDVPY---VTEAVSLLVKEL-DRT 137
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G P+T+ASY+I GG K+H + + Y ++ L+D L+ ++ +L Q+ A
Sbjct: 138 PLIGFAGGPFTLASYLIEGGPSKNHDRTKAMMYGAPELWHELMDRLAGITLAFLRLQVTA 197
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G + +++ Y RI + I F G +L
Sbjct: 198 GASAVQLFDSWVGAVAPQDYQKYVLPYTKRIFDGLADL--GVPRIHFGVDTGELLGLMGE 255
Query: 259 LTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-- 315
++ +G+DW VPL AL + +QGNLDP L+ +V+ + DVL G
Sbjct: 256 -AGADVVGVDWRVPLDDAALRVGAGKALQGNLDPAVLLAPWEVVAERAA---DVLRRGRV 311
Query: 316 --PFIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P DP + L V
Sbjct: 312 AEGHVFNLGHGVLPATDPDQLKRLADFV 339
>gi|2501647|sp|Q42967|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
Short=UPD; Short=URO-D; Flags: Precursor
gi|1009429|emb|CAA58040.1| uroporphyrinogen decarboxylase [Nicotiana tabacum]
Length = 391
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 194/354 (54%), Gaps = 21/354 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+N + +L+ ++G + PP+WLMRQAGRY+ Y+ + +K+ F D + VE++L
Sbjct: 46 INATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISL 105
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + + D ILFSDIL + ++ +GP + DP+ T +++ +
Sbjct: 106 QPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAA------DVEKVREF 159
Query: 120 L----LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ +P + ++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+
Sbjct: 160 IPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEP 219
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + LL + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ +V+
Sbjct: 220 KVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVK 279
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDP 291
+PN I +A G+G +L+ LT + + LDW+V + A ++ GP +QGN+DP
Sbjct: 280 LTHPNLPLILYASGSGGLLERL-PLTGVDVVSLDWTVDM--ADGRRRLGPNVAIQGNVDP 336
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
L + + + +N + G G I NLGHGI TP+ + + ++ K +R
Sbjct: 337 GVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGLR 390
>gi|225461671|ref|XP_002285451.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 409
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 173/321 (53%), Gaps = 7/321 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP ++
Sbjct: 56 LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQPWEAFH 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E GP + PI ++E + +L+P IDL L + +
Sbjct: 116 PDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEEGLKVLHP-IDL--KKLHFVGE 172
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL L+
Sbjct: 173 SLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLSHLT 232
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P + +
Sbjct: 233 QAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPIVLY 292
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T + IGLDW+V ++ + G +QGN+DP L + D
Sbjct: 293 INGNGGLLERMKG-TGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPALTDE 351
Query: 305 VNAILDVLGSGPFIFNLGHGI 325
+ ++ G I NLGHG+
Sbjct: 352 IQRVVRCAGPRGHILNLGHGV 372
>gi|58699355|ref|ZP_00374126.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534126|gb|EAL58354.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 233
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 141/233 (60%), Gaps = 6/233 (2%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT 103
NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ +
Sbjct: 3 NFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVES 62
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+ I+ LPI +I +R +LP +LIGF G PWTVASY+I GG K
Sbjct: 63 PKELKGPQEIE---TKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTF 119
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
++V + S +++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y
Sbjct: 120 --SKVLNFYPS-CLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVI 176
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A
Sbjct: 177 EPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWA 229
>gi|303272001|ref|XP_003055362.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226463336|gb|EEH60614.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 410
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 181/341 (53%), Gaps = 12/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PPIW+MRQAGRY+ Y+++ KK F + + VE++LQP +
Sbjct: 72 MLRAIRGEDVERPPIWMMRQAGRYMKIYQELCKKHPTFRERSEKVDLAVEISLQPWEAFQ 131
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPI----TTQEIYLLNPNIDLFLNYLLP 122
D ILFSDIL + V+ GP MDP+ ++I L P +
Sbjct: 132 PDGVILFSDILTPLSGMNIPFDIVKGTGPVIMDPVRGMDDVKKITKLEPEKSVPF----- 186
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +LR+++ N+ T++GF GAP+T+ASY++ GG + + A+ + + LL+
Sbjct: 187 VGEALGLLRQEVGNNATVLGFVGAPFTLASYIVEGGTSTHYKVIKKMAFDEPQIYEALLN 246
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D EY+ Q +G VIQIFD+ A +F+ Y + RI++ V+ +P+
Sbjct: 247 SITDSVVEYVKYQADSGAQVIQIFDSWASEFCPSDFDKYCLPYLTRIVTEVKATHPDVPL 306
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I ++ G+G +L+ + T ++ I LD +V ++ A L + VQGN+DP+ L +
Sbjct: 307 ILYSSGSGGLLERL-KTTGADVISLDGTVDMADARARLGMDQAVQGNMDPVSLFGSKAHI 365
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V + G+ + NLGHG+ +NV +TV+
Sbjct: 366 TERVLDTIKKAGNTKHVMNLGHGVMQGTPEENVAHFFQTVK 406
>gi|33862718|ref|NP_894278.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9313]
gi|45476860|sp|Q7V8B4|DCUP_PROMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33634634|emb|CAE20620.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9313]
Length = 352
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 189/349 (54%), Gaps = 13/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ + +L +G + P+W+MRQAGRY+ YR +R ++ +F + P+ + ++++
Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + VE++GP + PI + +I L P L N
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQP---LEPN 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 118 ATMPFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA R++ V+ +
Sbjct: 178 HRLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ I + G+ +L+ R T + I LDW+V ++ L + VQGN+DP L
Sbjct: 238 PDTPMILYISGSAGVLERMGR-TGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFG 296
Query: 297 GNQVMIDG-VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
+ + + V+A+ G I NLGHGI TP+ + K + KTV
Sbjct: 297 TPEAIRERIVDAVRKARGRR-HILNLGHGILPGTPEDNAKVFFETGKTV 344
>gi|308803785|ref|XP_003079205.1| Uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116057660|emb|CAL53863.1| Uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 410
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 183/352 (51%), Gaps = 19/352 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQ-IRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ +G + P+WL RQAGR+LPEY + R + KNFL++ P+ E T+QPIRRY
Sbjct: 49 MIRAARGERVERTPVWLFRQAGRHLPEYNEHKRARSKNFLELLADPKDVAECTMQPIRRY 108
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNP---NIDLFLNYLLP 122
N DAAILFSDILVIA+AL V +G + +P+ E P +++ L+++L
Sbjct: 109 NLDAAILFSDILVIAEALNVEVEMPGGKGILVPNPLKGPEDMGRVPKSIDVNDKLSHVLA 168
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ I+ +K + LIGF APWT+ YM+ G K+ + ++ + LLD
Sbjct: 169 SVREINAQIEKEGLGVPLIGFSAAPWTLMYYMVGGSSRKNTDSGMRWLKEHPKEAQELLD 228
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ V +YL AQI GV ++Q+F+ + E F YA + +I + VRR++P+
Sbjct: 229 ILTTVVIDYLCAQIENGVHMVQVFEAMCEHITEESFYEYAMPCMAKIAAEVRRRHPDIPI 288
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---------VQGNLDPMR 293
+ FA+ A Y L ++ + I +D ++ + A ++ + VQGN DP
Sbjct: 289 LGFARDAPYGLAALQQ-AGYDIITIDTAMDRTVARDVLRHDAEARGVEMSGVQGNFDPSL 347
Query: 294 LVVGNQVMIDGVNA----ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
L +G+ A +L G I NLG G++ + D + V LV ++
Sbjct: 348 LNKEGGSSFEGIEAEVTKMLTEFGPQKLIANLGAGLSGKEDVEKVAYLVDSI 399
>gi|312196138|ref|YP_004016199.1| uroporphyrinogen decarboxylase [Frankia sp. EuI1c]
gi|311227474|gb|ADP80329.1| uroporphyrinogen decarboxylase [Frankia sp. EuI1c]
Length = 390
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 177/327 (54%), Gaps = 19/327 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R L+ C E+TLQP+RR+ DAAI +SDI+V
Sbjct: 71 PVWFMRQAGRALPEYRALRAGVP-MLESCQDAALVTEITLQPVRRFGTDAAIFYSDIVVP 129
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G V V GP + +PI ++ L + + + + ++ +L +L
Sbjct: 130 LVAIGMGVDIVAGVGPVVAEPI--KDAAGLAALRSVEPDDVPYVHDAVRLLLAEL-GDTP 186
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG K H + + Y ++ LLD L+DV+ +L Q+ AG
Sbjct: 187 LIGFAGAPFTLASYLVEGGPSKTHAKTKRLMYTAPDLWHSLLDRLADVTIGFLRVQVDAG 246
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+D +Q+FD+ AG L E ++ Y A ++++A I F G +L +
Sbjct: 247 IDALQLFDSWAGALDEGDYRRYVAPHSAKVLAAFEDA--GVPRIHFGVNTGELLTAMGEV 304
Query: 260 TDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
++ +G+DW + L A ++ GP +QGNLDP + V+ + V +L + GS
Sbjct: 305 G-ADVVGVDWRLGLDEAA--RRVGPGRALQGNLDPTAVFAPPDVLAEKVRDVL-LRGSKA 360
Query: 317 --FIFNLGHGITPQVDP---KNVLDLV 338
IFNLGHG+ P+ DP +++DLV
Sbjct: 361 EGHIFNLGHGVIPETDPGVLAHIVDLV 387
>gi|284990409|ref|YP_003408963.1| uroporphyrinogen decarboxylase [Geodermatophilus obscurus DSM
43160]
gi|284063654|gb|ADB74592.1| uroporphyrinogen decarboxylase [Geodermatophilus obscurus DSM
43160]
Length = 355
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 183/353 (51%), Gaps = 31/353 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ +G + P+W MRQAGR LPEYR +R + LD C P+ E+TLQP+RR
Sbjct: 18 SDLVRAARGLPVRRTPVWFMRQAGRSLPEYRALRAGTR-MLDACQDPDLVTEITLQPVRR 76
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILFSDI++ G ++ GP + P+ + ++ L P L +L
Sbjct: 77 HGVDAAILFSDIVLPLVVAGVDIDIKPGVGPVIASPVRSVADVDALPPLEPDRLAFLATA 136
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ + P LIGF GAP+T+A+Y+I GG K+H + + F Y A+ LLD
Sbjct: 137 VRRLVAELGPTP----LIGFAGAPFTLATYLIEGGPSKEHARTKAFMYAEPEAWGRLLDR 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF 242
L+ +A +L Q+ AG +Q+FD+ AG L ++ ++ A+ R P
Sbjct: 193 LAVSAATFLTTQVDAGASAVQLFDSWAGVLSAADYAERVLPHSRAVLDALGDRDVPK--- 249
Query: 243 ISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVG 297
+ F G G +L + D+ A +G+DW VPL A ++ GP +QGNLDP +++
Sbjct: 250 VHFGVGTGELLP---LIGDAGADVVGVDWRVPLDEA--ARRVGPGRSLQGNLDPA-VLLA 303
Query: 298 NQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDP---KNVLDLVKTVRS 343
++ +D + V+ G +FNLGHG+ P DP +V+DLV + S
Sbjct: 304 DRATVD--REVRRVVAQGRAARGHVFNLGHGVLPDTDPGVLTSVVDLVHELTS 354
>gi|114556208|ref|XP_001154711.1| PREDICTED: uroporphyrinogen decarboxylase isoform 6 [Pan
troglodytes]
Length = 325
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 159/291 (54%), Gaps = 8/291 (2%)
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF 116
+T QP+RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++
Sbjct: 26 VTYQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVV 85
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L +FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A
Sbjct: 86 ASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQA 145
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA---ARSVGRIISAV 233
+ LL L+D YL+ Q+ AG +Q+F++HAG LG F +A R V + + A
Sbjct: 146 SHQLLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKAR 205
Query: 234 RRKYPNA--KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
R+ A I FAK + L+ + +GLDW+V A E + K +QGNLD
Sbjct: 206 LREAGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLD 264
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
P L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 265 PCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 315
>gi|28493702|ref|NP_787863.1| uroporphyrinogen decarboxylase [Tropheryma whipplei str. Twist]
gi|28572890|ref|NP_789670.1| uroporphyrinogen decarboxylase [Tropheryma whipplei TW08/27]
gi|45476890|sp|Q83FJ0|DCUP_TROWT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|45476891|sp|Q83H92|DCUP_TROW8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28411023|emb|CAD67408.1| uroporphyrinogen decarboxylase [Tropheryma whipplei TW08/27]
gi|28476744|gb|AAO44832.1| uroporphyrinogen decarboxylase [Tropheryma whipplei str. Twist]
Length = 385
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/354 (33%), Positives = 176/354 (49%), Gaps = 23/354 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I+E +G P+W MRQAGR LPEYR +R L+ C P+ E+TLQP+RRY+
Sbjct: 35 IMEAFRGTRPGCLPVWFMRQAGRSLPEYRAVRGT-NTLLEACLNPDLACEITLQPVRRYS 93
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIF 124
DAAILFSDI+V G V + GP ++ PI T + LL D + I
Sbjct: 94 VDAAILFSDIVVPLKLAGVGVDILPGTGPVLNNPIDTPDRVNTLLAKTAD---SIDFGII 150
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
I+ + N I LIGF GAP+T+A YM+ GG K H + R + + + + ++
Sbjct: 151 AEITRHTVSVLNGIPLIGFAGAPYTLACYMVEGGPSKTHMKARAMMHGDKKTWQKVMMLA 210
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF-ENYAARSVGRIISAV---------- 233
+ +S ++L AQI +G +QIFD+ AG L ++ +N A S I A
Sbjct: 211 ARLSGQFLAAQITSGAQAVQIFDSWAGSLSRKDYVDNVAPFSKMTIDLACGIDGNSDLSK 270
Query: 234 --RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLD 290
+ +P + FA AG++L R + S + +D++ PL A EL + P+QGN+D
Sbjct: 271 TGKSLWPRVPVLHFAANAGHLLTAIRDIGVS-VMSVDYTKPLDEASELLDDSMPLQGNID 329
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P L +V+ V I+ P + NLGHG+ P + +V S
Sbjct: 330 PAMLFAPWEVLKRHVLDIVQRASRAPSHVLNLGHGVPPDASCDQLARIVDLAHS 383
>gi|67921933|ref|ZP_00515449.1| Uroporphyrinogen decarboxylase HemE [Crocosphaera watsonii WH 8501]
gi|67856149|gb|EAM51392.1| Uroporphyrinogen decarboxylase HemE [Crocosphaera watsonii WH 8501]
Length = 354
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 188/344 (54%), Gaps = 17/344 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L QG +++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E++LQP R +
Sbjct: 10 LLRAAQGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G VE++GP +DP T +++ L P L LP +
Sbjct: 70 PDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRP---LDPEESLPFIK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I + LR ++ N T++GF G+PWT+A+Y I G K++ + A+ + L +
Sbjct: 127 TILNTLRAEVGNKSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKNMAFSQPEILHSFLSKI 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V++ +P+ I
Sbjct: 187 ADSIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + LDW+V ++ + G VQGN+DP ++ G+Q I
Sbjct: 247 YISGSAGVLERMGQ-SGVDIVSLDWTVDMAEGRKRLGRGMKVQGNIDP-GVLFGSQDFIK 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGI---TPQVDPKNVLDLVKTV 341
ILD + G G I NLGHG+ TP+ + + + K V
Sbjct: 305 A--RILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAKQV 346
>gi|307325180|ref|ZP_07604384.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
gi|306889326|gb|EFN20308.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
Length = 368
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 173/329 (52%), Gaps = 16/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQP+RR+ DAA+ FSDI+V
Sbjct: 39 PVWFMRQAGRSLPEYRKLREG-TAMLESCMRPDLVTEITLQPVRRHRVDAAVYFSDIVVP 97
Query: 81 ADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP ++ PI T+ ++ L P + Y + ++I L +L
Sbjct: 98 LKAIGIDLDIKPGVGPVVERPIRTRADLERLRPLDPDDVKY---VTEAIGALVGEL-GAT 153
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY+I GG ++H + Y + + LLD L+D++A +L QI A
Sbjct: 154 PLIGFAGAPFTLASYLIEGGPSRNHEHTKALMYGDPALWAALLDRLADITAAFLKVQIEA 213
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G L
Sbjct: 214 GASAVQLFDSWVGALAPADYRRSVLPASKKVFDAVAGY--GVPRIHFGVGT-GELLGLLG 270
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL-GS 314
++ +G+DW VPL+ A ++ GP +QGNLDP L + +L+ G
Sbjct: 271 EAGADVVGVDWRVPLNEA--ARRVGPGKALQGNLDPAVLFAPRTAVEAKAEEVLEAARGL 328
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP + LV+ V +
Sbjct: 329 EGHIFNLGHGVLPSTDPDALTRLVEYVHT 357
>gi|297736517|emb|CBI25388.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 190/351 (54%), Gaps = 15/351 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++L
Sbjct: 47 INATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISL 106
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + + D ILFSDIL + ++ +GP + +P+ T +++ P
Sbjct: 107 QPWKVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPE--- 163
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + ++++ILRK++ N ++GF GAP+T+ASY++ GG K + + A+ +
Sbjct: 164 --DSVPYVGEALTILRKEVDNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPK 221
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL + A+Y+ Q G +QIFD+ A L +FE ++ + +I+ +V++
Sbjct: 222 VLHALLQKFTTSMAKYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQ 281
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
+PN I +A G+G +L+ LT + + LDW+V ++ L + VQGN+DP L
Sbjct: 282 THPNLPLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVL 340
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + + +N + G G I NLGHGI TP+ + + ++ + +R
Sbjct: 341 FGSKEFITNRINDTVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVARGIR 391
>gi|313894132|ref|ZP_07827698.1| uroporphyrinogen decarboxylase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441696|gb|EFR60122.1| uroporphyrinogen decarboxylase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 347
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 174/329 (52%), Gaps = 9/329 (2%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y
Sbjct: 6 LDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAIL+ DI+ A+ NV GP PI + ++ L+ ++Y I ++
Sbjct: 65 DAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVEKLDAFDPTKVDY---IGKT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D
Sbjct: 122 ITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDVWNALMTKLAD 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S YL Q AG + +QIFD+ G + +++ + RII V+ KYP+
Sbjct: 181 MSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMAMNG 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G +++ + L + I LDW + A E VQGNLDP L + + V+
Sbjct: 241 VGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFADEKTLAREVD 299
Query: 307 AI-LDVLGSGPFIFNLGHGITPQVDPKNV 334
I L+ + G IFNLGHG+ P+ DPK +
Sbjct: 300 RILLEGIRYGRHIFNLGHGVFPEADPKKL 328
>gi|308799229|ref|XP_003074395.1| uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116000566|emb|CAL50246.1| uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 394
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 167/337 (49%), Gaps = 3/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+WLMRQAGRY+ E+R K+ F TPE +EL++QP R Y
Sbjct: 50 LLRAARGEDVERSPVWLMRQAGRYMAEFRAYSTKY-GFRHRSETPEIAIELSMQPWRAYK 108
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D I+FSDIL ALG V+ +GP + + + + +D L + + +
Sbjct: 109 PDGVIMFSDILTPLPALGIEFDVVKGKGPVVHQVKSMDDVRAMKTLDDPEKSLPFVREIL 168
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S LRK++ T++GF G+PWT+A+Y + G + + QN + LD L+D
Sbjct: 169 SSLRKEIDGQSTMLGFIGSPWTLAAYAMEGSSDRHLVTTKQIMTQNPELLHAFLDKLADA 228
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y+ QI +G V+QIFD+ A L +F ++ RII+ V+ ++P I A
Sbjct: 229 LGVYVCYQIESGAQVVQIFDSWAHHLSPQQFLEFSHPYNERIIAYVKERHPETPLIFHAN 288
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L ++ T ++ IGLDW+ + A L + +QGN+DPM L + + V
Sbjct: 289 GGCGKLNELKKST-ADVIGLDWNTSMVDARAVLGPDRVLQGNMDPMYLFASPERIKQEVA 347
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ GS I N+GHG+ ++V R+
Sbjct: 348 NCVRDAGSSKHILNVGHGVVQGTPEESVGHFCDAARA 384
>gi|50954007|ref|YP_061295.1| uroporphyrinogen decarboxylase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|71648663|sp|Q6AHF5|DCUP_LEIXX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|50950489|gb|AAT88190.1| uroporphyrinogen decarboxylase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 377
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 180/357 (50%), Gaps = 25/357 (7%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++ QG P+W MRQAGR LPEYR +R + LD+C P E+TLQP+RR
Sbjct: 20 SRLVRSYQGERQEVTPVWFMRQAGRSLPEYRDLRVGTR-MLDVCLDPAMASEITLQPVRR 78
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNID---LFLNYL 120
+ DA I FSDI+V G V +GP + T+ ++ L+ +D L +
Sbjct: 79 HGVDAGIFFSDIVVPLKLAGVEVEIQPGKGPVFERAVRTSADVDRLS-AVDPAALAADTF 137
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + +L N LIGF GAP+T+A+Y++ GG KDH + R + A+ L
Sbjct: 138 AAVQEAVRLTTAEL-NETPLIGFAGAPFTLAAYLVEGGPSKDHLRARTLMHAAPGAWARL 196
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR---KY 237
+D+ +D+S +L AQ+ AG Q+FD+ AG L ++ +AA + R S VR
Sbjct: 197 MDWTADLSGAFLRAQVLAGASAAQLFDSWAGSLSLRDYAEHAAPASARAFSHVRDLTYTV 256
Query: 238 PNAK-----------FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPV 285
P+A + F G G +L ++AIG+D L A L P+
Sbjct: 257 PSADPDGEAVVRAVPIVHFGVGTGELLPAMHE-AGADAIGVDHRTLLDEASRRLGHIVPL 315
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
QGN DP L +V+ +LD + P +FNLGHG+ P+ DP + +V+ V
Sbjct: 316 QGNADPAMLAAPWEVLSGHALDVLDRGRAAPAHVFNLGHGVPPETDPAVLTRVVELV 372
>gi|293194181|ref|ZP_06609944.1| uroporphyrinogen decarboxylase [Actinomyces odontolyticus F0309]
gi|292819766|gb|EFF78778.1| uroporphyrinogen decarboxylase [Actinomyces odontolyticus F0309]
Length = 365
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 175/354 (49%), Gaps = 40/354 (11%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
P P+W MRQAGR LPEYR++R L+ C P+ E T+QP+RR+ DA I FSD
Sbjct: 15 GPTPVWFMRQAGRSLPEYRELRADVGLPMLEACLRPDVAAEATVQPVRRHGVDAGIFFSD 74
Query: 77 ILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY---------------- 119
I+V G V GP +D P T+E +ID L++
Sbjct: 75 IMVPLRLAGVGVEIEPGVGPVLDHPYRTRE------SIDELLSHRYGEGSWTDSTGRARD 128
Query: 120 ----LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ ++L +LIGF GAP+T+A+YM+ G +DH R A +
Sbjct: 129 CAEGAQSVRDGVATAVREL-GSTSLIGFGGAPFTLAAYMVEGRPSRDHMAARSLAASDPG 187
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF-ENYA------ARSVGR 228
A++ L+++ + VSA+++ AQI AG Q+FD+ G L + E+ A A+ V
Sbjct: 188 AWDALMNWCAWVSADFITAQIEAGASAAQLFDSWVGSLSPRTYRESVAPYSRLVAQRVAG 247
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+S V + A I F G+ +L + + ++ +G+DW LS+A+ VQGN
Sbjct: 248 AVSPVTGE--RAPLIHFGTGSAPILADMAEV-GADCVGVDWKTDLSWAVTQVPGKAVQGN 304
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LDP L V+ V ILD S +FNLGHG+ P DP + +V+ V
Sbjct: 305 LDPALLQAPWNVIEQAVRDILDAGRSASGHVFNLGHGVPPTTDPDVLTRIVELV 358
>gi|282849317|ref|ZP_06258702.1| uroporphyrinogen decarboxylase [Veillonella parvula ATCC 17745]
gi|282581021|gb|EFB86419.1| uroporphyrinogen decarboxylase [Veillonella parvula ATCC 17745]
Length = 347
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 180/343 (52%), Gaps = 11/343 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y
Sbjct: 6 LDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGV 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAIL+ DI+ A+ NV GP PI + ++ L+ + Y I ++
Sbjct: 65 DAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVEALDSFDPTKVEY---IGKT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D
Sbjct: 122 ITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPHVWNALMTKLAD 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S YL Q AG + +QIFD+ G + +++ + RII AV+ KYP+
Sbjct: 181 MSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKAVKAKYPHLPIAMNG 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G +++ + L + I LDW + A E VQGNLDP L + + V+
Sbjct: 241 VGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAHEVD 299
Query: 307 AI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSEKI 346
I L+ + G IFNLGHG+ P+ DP+ + L V RS +I
Sbjct: 300 RILLEGVRYGRHIFNLGHGVFPEADPQKLHWLTDYVHERSREI 342
>gi|293334721|ref|NP_001169341.1| hypothetical protein LOC100383208 [Zea mays]
gi|224028823|gb|ACN33487.1| unknown [Zea mays]
Length = 338
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 180/325 (55%), Gaps = 10/325 (3%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R + D ILFSDIL A
Sbjct: 1 MMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFAPDGVILFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+G +++GP + P+ ++ ++ L P IDL + L + +S+ ILR ++ L+
Sbjct: 61 IGVPFDISDSKGPVIQSPVRSEGQVRELVP-IDL--DMLQFVGESLKILRNEIDGKAALL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAPWT+A+Y++ GG + + + LL L++ ++Y+I Q+++G
Sbjct: 118 GFVGAPWTIATYIVEGGMTNTYTNIKNMCHTAPDVLRCLLSHLAEAISDYIIYQVNSGAQ 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
IQIFD+ G L H +E ++ + +I++ ++++ P+ + + G G +L+ + T
Sbjct: 178 CIQIFDSWGGQLPPHVWEQWSKPYIKKIVNRIKKECPHVPLVLYRNGNGGLLERMKD-TR 236
Query: 262 SNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ IGLDW+V ++ + G VQGN+DP L V+ D + ++ G+ I N
Sbjct: 237 VDVIGLDWTVDMADGRKRLGNGISVQGNVDPAFLFSPLPVLTDEIRRVVKAAGTKGHILN 296
Query: 321 LGHGI---TPQVDPKNVLDLVKTVR 342
LGHG+ TP+ + D+ +++R
Sbjct: 297 LGHGVLQKTPEEAVAHFFDVTRSLR 321
>gi|304403826|ref|ZP_07385488.1| uroporphyrinogen decarboxylase [Paenibacillus curdlanolyticus YK9]
gi|304346804|gb|EFM12636.1| uroporphyrinogen decarboxylase [Paenibacillus curdlanolyticus YK9]
Length = 379
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 179/327 (54%), Gaps = 11/327 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ + ++ ++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+T+ P+R+
Sbjct: 28 RFIRAIRQEAVDQVPVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTMMPVRKL 86
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIF 124
DAAIL+SDI+ ++G + V N GP + +PI + ++ L P ID+ + L +
Sbjct: 87 GVDAAILYSDIMNPVASIGIDFDIVANVGPVIANPIRSAADVDRLKP-IDVEGD-LGHVI 144
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL ++L + LI F GAP+T+ASY+I G +++ + + Y ++ L+ L
Sbjct: 145 ETIRILDREL--DVPLITFAGAPFTIASYIIEGRPSRNYLRTKALMYSEPDVWHRLMHKL 202
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D+ YL A + AG Q+FD+ G L H+F + ++ RI S + P K
Sbjct: 203 GDMVIAYLRAHMAAGGKAFQLFDSWVGALAPHDFRTFVLPTIERIFSEL-SDLPQPKIYF 261
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
+G +L L ++AIGLDW V + L + VQGNLDP+ L V+
Sbjct: 262 PGVASGELLTELHSL-QADAIGLDWRVSIPEGRRRLGGKFAVQGNLDPVVLTAPQSVIEA 320
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQV 329
I+D P F+FNLGHG+ P+
Sbjct: 321 HAKTIIDQGLEQPGFVFNLGHGLFPEA 347
>gi|269797283|ref|YP_003311183.1| uroporphyrinogen decarboxylase [Veillonella parvula DSM 2008]
gi|269093912|gb|ACZ23903.1| uroporphyrinogen decarboxylase [Veillonella parvula DSM 2008]
Length = 353
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 179/343 (52%), Gaps = 11/343 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y
Sbjct: 12 LDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGV 70
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAIL+ DI+ A+ NV GP PI + ++ L ++Y I ++
Sbjct: 71 DAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVDKLETFDPTKVDY---IAKT 127
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D
Sbjct: 128 ITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDMWNALMTKLAD 186
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S YL Q AG + +QIFD+ G + +++ + RII V+ KYP+
Sbjct: 187 MSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMAMNG 246
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G +++ + L + I LDW + A E VQGNLDP L + + V+
Sbjct: 247 VGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAREVD 305
Query: 307 AI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSEKI 346
I LD + G IFNLGHG+ P+ DP+ + L V RS KI
Sbjct: 306 RILLDGVRYGRHIFNLGHGVFPEADPQKLHWLTDYVHERSRKI 348
>gi|148242018|ref|YP_001227175.1| uroporphyrinogen decarboxylase [Synechococcus sp. RCC307]
gi|166234293|sp|A5GSG3|DCUP_SYNR3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|147850328|emb|CAK27822.1| Uroporphyrinogen decarboxylase [Synechococcus sp. RCC307]
Length = 352
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 181/337 (53%), Gaps = 8/337 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDALPLLLRAARGEQVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI ++ L P L
Sbjct: 61 QPYNAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQINDPIRNLAQVEALRP---LVPA 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + + + LR + N+ T++GF GAPWT+A+Y++ G K++ + A++
Sbjct: 118 ETMPFVGEVLGRLRSSVGNNATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPEML 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +
Sbjct: 178 HKLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGELSPADYDTFAAPYQRKVVELVKQTH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ I + G+ +L+ R T + I LDW+V ++ L VQGN+DP L
Sbjct: 238 PDTPMILYISGSAGVLERMGR-TGVDFISLDWTVDMADGCARLPHHLGVQGNVDPGLLFG 296
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ + ++ + I NLGHGI P +N
Sbjct: 297 TPEAIRVRIDDTVRKARGRRHILNLGHGILPGTPEEN 333
>gi|124023536|ref|YP_001017843.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9303]
gi|166234269|sp|A2CAR8|DCUP_PROM3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123963822|gb|ABM78578.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9303]
Length = 352
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 182/339 (53%), Gaps = 10/339 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ + +L +G + P+W+MRQAGRY+ YR +R ++ +F + P+ + ++++
Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + VE++GP + PI + +I L P L N
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQP---LEPN 117
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q
Sbjct: 118 ATMPFVGEVLGRLRESVGNRAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLL 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA R++ V+ +
Sbjct: 178 HRLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTH 237
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ I + G+ +L+ R T + I LDW+V ++ L + VQGN+DP L
Sbjct: 238 PDTPMILYISGSAGVLERMGR-TGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFG 296
Query: 297 GNQVMIDG-VNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + + V+A+ G I NLGHGI P N
Sbjct: 297 TPEAIRERIVDAVRKARGRR-HILNLGHGILPGTPEDNA 334
>gi|302142896|emb|CBI20191.3| unnamed protein product [Vitis vinifera]
Length = 1560
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 173/321 (53%), Gaps = 7/321 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP ++
Sbjct: 1207 LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQPWEAFH 1266
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E GP + PI ++E + +L+P IDL L + +
Sbjct: 1267 PDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEEGLKVLHP-IDL--KKLHFVGE 1323
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL L+
Sbjct: 1324 SLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLSHLT 1383
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P + +
Sbjct: 1384 QAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPIVLY 1443
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T + IGLDW+V ++ + G +QGN+DP L + D
Sbjct: 1444 INGNGGLLERMKG-TGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPALTDE 1502
Query: 305 VNAILDVLGSGPFIFNLGHGI 325
+ ++ G I NLGHG+
Sbjct: 1503 IQRVVRCAGPRGHILNLGHGV 1523
>gi|302511525|ref|XP_003017714.1| hypothetical protein ARB_04597 [Arthroderma benhamiae CBS 112371]
gi|291181285|gb|EFE37069.1| hypothetical protein ARB_04597 [Arthroderma benhamiae CBS 112371]
Length = 350
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 173/328 (52%), Gaps = 28/328 (8%)
Query: 27 QAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADAL 84
+AGRYLPEY + + ++F + C +PE LTLQPI RY DAAI+FSDILVI A+
Sbjct: 18 RAGRYLPEYHEAKGD-RDFFECCRSPEVASTLTLQPIERYAGLIDAAIIFSDILVIPQAM 76
Query: 85 GRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LNYLLPIFQSISILRKKLPNH 137
G V ++ +GP P+ T E +LN +D+ L+Y ++++I++ R+KL
Sbjct: 77 GMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRTVDVTTELDY---VYKAITLTRQKLEGR 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GAPWT+ YM+ GG K + + Y+ A LL +S+V E+L Q+
Sbjct: 134 VPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDASKKLLQKISEVCVEHLAQQVK 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK------YPNAKFISFAKGAGY 251
AG +IQ+FD+ AG L F ++ + R +SA K FAKGA Y
Sbjct: 194 AGAQMIQVFDSWAGELSPRSFAEFSLPYL-RYVSANLPKRLQELGLEAVPMTVFAKGAWY 252
Query: 252 MLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAI 308
L L +S N +GLDW + A + V QGN DP L + + V +
Sbjct: 253 ALDE---LCESGYNVVGLDWQHDAAKARAVANGRVVLQGNADPGCLYGTREGITAVVEEM 309
Query: 309 LDVLGSGP--FIFNLGHGITPQVDPKNV 334
+ G G +I NLGHG+TP V P ++
Sbjct: 310 VKSFGGGKQGWIANLGHGVTPFVKPDDL 337
>gi|328950659|ref|YP_004367994.1| Uroporphyrinogen decarboxylase [Marinithermus hydrothermalis DSM
14884]
gi|328450983|gb|AEB11884.1| Uroporphyrinogen decarboxylase [Marinithermus hydrothermalis DSM
14884]
Length = 339
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 181/347 (52%), Gaps = 16/347 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNE L+ +G P+W MRQAGRY PEYR+IR+++ ++ PE T E+T
Sbjct: 1 MNE---VFLKAARGETTPYTPVWFMRQAGRYQPEYRKIRERY-TLPEIVRHPEVTAEVTK 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNP-NIDLFL 117
P+ + DAAILF+DI +G ++ VE +GP + +PI T ++++ L P +
Sbjct: 57 LPVAQLGVDAAILFADITTPLYGMGFDLDIVEGKGPVIHNPIRTPKDLHRLQPFDPKAHT 116
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
++L ++I +L++ L + LIGF GAP+T+ASY+I GG ++ + + F Y A+
Sbjct: 117 PFVL---EAIRLLKEDL--EVPLIGFAGAPFTLASYLIEGGPTRNFVRVKAFMYAEEEAW 171
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L+ L++ YL AQ+HAG D +Q+FD+ G L ++ Y + R+ + +
Sbjct: 172 HQLMRALTEAMIAYLTAQVHAGADAVQVFDSWVGHLTASDYRRYVKPHMQRLFAGLSGL- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
I F ++L+ + IG+D + P +A PVQGNLDP L
Sbjct: 231 -GVPTIHFGTRTMHLLEEM-QAAGGQVIGVDHTTPFDWARARLGATPVQGNLDPAVLFAP 288
Query: 298 NQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V +L+ G IFNLGHGI P + V +V V
Sbjct: 289 WPVVEREVLRVLEANAGRAGHIFNLGHGILPGTPVETVQRVVAFVHE 335
>gi|320166787|gb|EFW43686.1| uroporphyrinogen decarboxylase [Capsaspora owczarzaki ATCC 30864]
Length = 397
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 34/344 (9%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPE+R++R + +F +C TP+ E+TLQP+RR+ DAAI+FSDILV+
Sbjct: 59 PVWAMRQAGRYLPEFREMRAE-SDFFKVCRTPQLACEVTLQPLRRFELDAAIIFSDILVV 117
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFLNYLLPIFQSISILRKKLPN 136
ALG +V ++ +GP +P+ T E N+D L Y +F ++++ R L
Sbjct: 118 PQALGMHVDMIKGKGPSFPEPLNTPEDLARVKTEVNVDEALGY---VFDALTLTRHSLDG 174
Query: 137 HITLIGFCGAPWTVA-----SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+ L GF GAP V + + G + + +F Y A + LL ++ V+
Sbjct: 175 LVPLFGFAGAPQNVRQGENLALQVPRGIARAFAKTWLFKY--PEASHELLRRITTVT--- 229
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-------YPNAKFIS 244
+ AG ++Q+FD+ AG L EF +A + +I V+R +
Sbjct: 230 ----MRAGAQILQVFDSWAGELSPTEFAQFALPYLKQIAVEVKRACVEQLGMTEAVPMVV 285
Query: 245 FAKGAGYMLKNYRRLTDS---NAIGLDWSVPLSFA-LELQKEG-PVQGNLDPMRLVVGNQ 299
FAKGA + L+ + +GLDW++P A + G VQGNLDP L +
Sbjct: 286 FAKGAHFALEELASPATGGGYDVVGLDWTMPPQSARARVASSGVAVQGNLDPCVLFAPHS 345
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V ++L G+ +I NLGHG+ P+ P+ + V V +
Sbjct: 346 QIEAQVTSMLAQFGTQNYIANLGHGMMPEHSPEALRCFVDAVHA 389
>gi|302666723|ref|XP_003024958.1| hypothetical protein TRV_00879 [Trichophyton verrucosum HKI 0517]
gi|291189036|gb|EFE44347.1| hypothetical protein TRV_00879 [Trichophyton verrucosum HKI 0517]
Length = 350
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 173/327 (52%), Gaps = 26/327 (7%)
Query: 27 QAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADAL 84
+AGRYLPEY + + ++F + C +PE LTLQPI RY DAAI+FSDILVI A+
Sbjct: 18 RAGRYLPEYHEAKGD-RDFFECCRSPEVASTLTLQPIERYAGLIDAAIIFSDILVIPQAM 76
Query: 85 GRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LNYLLPIFQSISILRKKLPNH 137
G V ++ +GP P+ T E +LN +D+ L+Y ++++I++ R+KL
Sbjct: 77 GMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRTVDVTTELDY---VYKAITLTRQKLEGR 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGF GAPWT+ YM+ GG K + + Y+ A LL +S+V E+L Q+
Sbjct: 134 VPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDASKKLLQKISEVCVEHLAQQVK 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYM 252
AG +IQ+FD+ AG L F ++ + + + + ++ FAKGA Y
Sbjct: 194 AGAQMIQVFDSWAGELSPRSFAEFSLPYLRYVSANLPKRLQEMGLEVVPMTVFAKGAWYA 253
Query: 253 LKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAIL 309
L L +S N +GLDW + A + V QGN DP L + + V ++
Sbjct: 254 LDE---LCESGYNVVGLDWQHDAAKARAVANGRVVLQGNADPGCLYGTREGITAVVEEMV 310
Query: 310 DVLGSGP--FIFNLGHGITPQVDPKNV 334
G G +I NLGHG+TP V P ++
Sbjct: 311 KGFGGGKQGWIANLGHGVTPFVKPDDL 337
>gi|317125036|ref|YP_004099148.1| uroporphyrinogen decarboxylase [Intrasporangium calvum DSM 43043]
gi|315589124|gb|ADU48421.1| uroporphyrinogen decarboxylase [Intrasporangium calvum DSM 43043]
Length = 358
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 13/347 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ R ++ + ++ P+W MRQAGR LPEYR +R+ L+ C PE E+TLQ
Sbjct: 17 SPRDSDLVRAARRQPVSRTPVWFMRQAGRSLPEYRAVREGIP-MLESCMRPELITEITLQ 75
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ V GP + PI + L +DL ++
Sbjct: 76 PVRRHGVDAAIFFSDIVVPLKAIGIDLDIVPGVGPVVARPI--RRAKDLEQLVDLTPEHV 133
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +++ L +L LIGF GAP+T+ASY++ GG K+H + + + ++ L
Sbjct: 134 PYITEAVQQLVSEL-GATPLIGFAGAPFTLASYLVEGGPSKNHEHTKALMHGDPDLWDAL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPN 239
L+ +S +L Q AG +Q+FD+ G L ++ + R ++AV + P
Sbjct: 193 CARLAQISGAFLRVQAGAGASAVQLFDSWVGALSRADYTRHVQRHSASALAAVADLEVPR 252
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F G G +L+ + +G+D+ V L+ A+E L + VQGNLDP L
Sbjct: 253 ---IHFGVGTGELLRLMGE-AGAEVVGVDYRVGLTDAVERLGPDYAVQGNLDPALLFAPW 308
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V I++ P IFNLGHG+ P VDP +VL V + E
Sbjct: 309 DALERRVREIVEEGRHAPGHIFNLGHGVLPSVDP-DVLTRVTALVHE 354
>gi|299115710|emb|CBN74275.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 422
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 182/345 (52%), Gaps = 18/345 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ EYR + +K F + TPE + E++LQP R Y
Sbjct: 85 LLRAARGEKVERVPVWMMRQAGRHIKEYRDLVQKHPTFRERSETPELSTEISLQPWRNYK 144
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITT----QEIYLLNPNIDLFLNYLLPI 123
D ILFSDIL +G + E GP++ P+ T ++++ ++P +
Sbjct: 145 TDGVILFSDILTPLPGMGIDFTIEEKAGPKIPPMRTWDSMKKMHPIDPEKACPF-----V 199
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q+++ LR + N T++GF G P+T+A+YM+ G K++ + + A+ + + +L
Sbjct: 200 GQTLNELRGVVGNEATVLGFVGCPYTLATYMVEGKTSKEYLEIKKMAFLEPKLLHAMLKS 259
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D +Y Q+ +G VIQ+FD+ AG L +++ +AA +I ++ +P I
Sbjct: 260 LADSIGDYANYQVDSGAQVIQVFDSWAGHLSPKDYDTFAAPYQRMVIEKIKAVHPEVPVI 319
Query: 244 SFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
+ +G +L+ R+ S + + LDW+V + A + + + +QGNLDP L +
Sbjct: 320 IYINKSGALLE---RMATSGVDIVSLDWTVTVPEARKRIGDDIGIQGNLDPAILHGDHAT 376
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + IL G + NLGHGI TP+ + +D VK R
Sbjct: 377 IKERTEEILRDGGGRNHVMNLGHGIDAGTPEDNAAFFIDTVKNFR 421
>gi|307150907|ref|YP_003886291.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7822]
gi|306981135|gb|ADN13016.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7822]
Length = 353
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 185/342 (54%), Gaps = 14/342 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + + +E++LQP +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENADLAIEISLQPWHAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL +G +E++GP +D PI TQ +I L+P +P +
Sbjct: 70 PDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQIDNLHP---FDPEETVPFVK 126
Query: 126 SI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I LR+++ N T++GF GAPWT+A+Y I G K + + A+ + L L
Sbjct: 127 TILKTLRQEVGNKSTVLGFVGAPWTLAAYAIEGKGSKTYSIIKSMAFSEPALLHQFLGKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMVATYIRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYHQQVVRQVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + + +DW+V ++ A + L K+ VQGN+DP L G+Q I
Sbjct: 247 YISGSAGVLERMGQ-SGVDLVSVDWTVDMAEARVRLGKDMKVQGNIDPGAL-FGSQAFIR 304
Query: 304 GVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
ILD + G+ I NLGHG+ NV +T +
Sbjct: 305 --ERILDTIRKAGNRGHILNLGHGVLVGTPEDNVRFFFETAK 344
>gi|167463588|ref|ZP_02328677.1| uroporphyrinogen decarboxylase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383218|ref|ZP_08057029.1| uroporphyrinogen decarboxylase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152487|gb|EFX45273.1| uroporphyrinogen decarboxylase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 357
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 182/340 (53%), Gaps = 13/340 (3%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L + I+ P+W MRQAGRY P+YR+I++ + L++C PE E+T+ P+++
Sbjct: 9 LRACRRESIDTVPVWYMRQAGRYDPDYRKIKESY-TLLEICRQPELAAEVTMMPVKKLGV 67
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNP-NIDLFLNYLLPIFQ 125
DAAIL+SDI+ +LG V+N GP ++ P+ T++++ L P ++D L + I +
Sbjct: 68 DAAILYSDIMNPVASLGVKFDIVKNIGPVIEHPLRTSKDVETLRPIDVDGDLPH---IME 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I IL ++L + LI F GAP+T+ASY+I G K + Q + Y + + L++ L
Sbjct: 125 TIRILDREL--TVPLITFAGAPFTIASYLIEGRPSKSYIQTKTMMYSQPKVWFALMEKLG 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++ YL AQI G IQ+FD+ G L +F Y ++ RI ++ + P K
Sbjct: 183 NMIIAYLKAQIANGAKAIQLFDSWVGTLSPEDFSFYVLPTIERIFEDIQDQ-PVPKIYFP 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+G +L R L ++ IGLDW V + + L VQGNLDP L ++
Sbjct: 242 GVSSGELLPVLRHLK-ADVIGLDWRVSVEEGRKRLDHTFAVQGNLDPYVLTAPMPLIQAK 300
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI+D P F+FNLGHG+ P+ + +L V
Sbjct: 301 AKAIIDQGIQRPGFVFNLGHGLFPEASLDKLRELTDFVHE 340
>gi|326444027|ref|ZP_08218761.1| uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
Length = 371
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 173/327 (52%), Gaps = 16/327 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 49 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMRPELVKEITLQPVRRHGVDAAIYFSDIVVP 107
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +P ++ ++ L DL + + ++I +L +L
Sbjct: 108 LKAIGIDLDIKPGVGPVVAEPFRSRADLARLR---DLTPEDVWYVTEAIGLLTAEL-GGT 163
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + + + LLD L+++++ +L QI A
Sbjct: 164 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALLHSDPELWADLLDRLAEITSAFLKVQIEA 223
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 224 GASAVQLFDSWVGALAPVDYRRSVMPASVKVFDAVAGY--GVPRIHFGVGTGELL-GLMG 280
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAIL-DVLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + + +L G
Sbjct: 281 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAGTRAVEAMTDEVLRAAAGL 338
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P DP + LV V
Sbjct: 339 EGHVFNLGHGVLPTTDPDALTRLVSYV 365
>gi|294815680|ref|ZP_06774323.1| Uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
gi|294328279|gb|EFG09922.1| Uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
Length = 402
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 173/327 (52%), Gaps = 16/327 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+RR+ DAAI FSDI+V
Sbjct: 80 PVWFMRQAGRSLPEYLKVREGIA-MLDSCMRPELVKEITLQPVRRHGVDAAIYFSDIVVP 138
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + +P ++ ++ L DL + + ++I +L +L
Sbjct: 139 LKAIGIDLDIKPGVGPVVAEPFRSRADLARLR---DLTPEDVWYVTEAIGLLTAEL-GGT 194
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + + + + LLD L+++++ +L QI A
Sbjct: 195 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALLHSDPELWADLLDRLAEITSAFLKVQIEA 254
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+FD+ G L ++ + ++ AV I F G G +L
Sbjct: 255 GASAVQLFDSWVGALAPVDYRRSVMPASVKVFDAVAGY--GVPRIHFGVGTGELL-GLMG 311
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAIL-DVLGS 314
++ +G+DW VPL A ++ GP +QGNLDP L G + + + +L G
Sbjct: 312 EAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAVLFAGTRAVEAMTDEVLRAAAGL 369
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+FNLGHG+ P DP + LV V
Sbjct: 370 EGHVFNLGHGVLPTTDPDALTRLVSYV 396
>gi|332668765|ref|YP_004451772.1| uroporphyrinogen decarboxylase [Cellulomonas fimi ATCC 484]
gi|332337802|gb|AEE44385.1| uroporphyrinogen decarboxylase [Cellulomonas fimi ATCC 484]
Length = 354
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 172/327 (52%), Gaps = 9/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R + LD C P E+TLQP+RR++ DAAI FSDI+V
Sbjct: 32 PVWFMRQAGRSLPEYRALRAGTR-MLDACLDPGMASEITLQPVRRHDVDAAIFFSDIVVP 90
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G +V GP M P+ T ++ L L L P+ + ++ +L
Sbjct: 91 LRLAGVDVEIKPGVGPVMGAPVRTADDVARLRDLGPLTPERLAPVSEGVAATVAQL-GST 149
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+A+Y++ GG +DH R + + + + L + +DV+ +L AQ+ A
Sbjct: 150 PLIGFAGAPFTLAAYLVEGGPSRDHLAARTLMHADPQTWTALTQWAADVTGAFLRAQVLA 209
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G Q+FD+ AG LG ++ + A + R ++AV + + + F G +L R
Sbjct: 210 GASATQLFDSWAGSLGLADYTAHVAPASARALAAVADL--DVRKVHFGTGTSELLAAMRD 267
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
+ ++ +G+D+ +PL A L P+QGN+DP L V+ V ++ P
Sbjct: 268 V-GADVVGVDYRLPLDEANRRLGGTTPLQGNIDPALLAAPWPVLEAHVRDVVARGAQAPA 326
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHG+ P+ DP + +V V S
Sbjct: 327 HVVNLGHGVPPETDPDVLTRVVTLVHS 353
>gi|149240365|ref|XP_001526058.1| uroporphyrinogen decarboxylase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450181|gb|EDK44437.1| uroporphyrinogen decarboxylase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 360
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 25/349 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PIW+MRQAGRYLPEY +++ K+F C E +T+QP+ ++
Sbjct: 12 ILRAAKGEKVERVPIWIMRQAGRYLPEYHEVKGN-KDFFQACQDAETASAITIQPVDHFD 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFLNYLL 121
DAAI+FSDILVI A+G + VE +GP P+ + + LNP++ + L++
Sbjct: 71 GLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFASPLRSPDDLARIDLNPDVKVKLDW-- 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++I++ RKKL + L+GF GAPWT+ YM G K + + ++ + A + LL
Sbjct: 129 -AYKAITLTRKKLDGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKQWIFEYTEAAHKLL 187
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS---------A 232
D E+L Q+ AG ++Q+F++ AG L +F ++ + +I S
Sbjct: 188 QATCDACIEFLAQQVVAGAQMLQVFESWAGELSPADFNTFSLPYLKQIASRLPKRLSELG 247
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
++ K P FAKGA Y L + + + LDW A ++ + +QGNLD
Sbjct: 248 IKEKIP---LTVFAKGAWYALDDLCN-AGYDTVSLDWLYDPKAARKVVGDRRITLQGNLD 303
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
P + + V+ V ++ G +I N GHG P + P+ + +K
Sbjct: 304 PGVMYGSDDVIDQKVKEMISGFGKENYIINFGHGTHPFMKPEKIERFLK 352
>gi|240279822|gb|EER43327.1| uroporphyrinogen decarboxylase [Ajellomyces capsulatus H143]
Length = 289
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/224 (40%), Positives = 135/224 (60%), Gaps = 13/224 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPIERYV 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI A+G V ++ +GP P Q +L+ N+D+ L+
Sbjct: 72 GLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPLKSPDDPQYRQILDKNVDVAKELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYRYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +++
Sbjct: 189 ALLQKIAEICVEYLALQVVAGSQLVQVFDSWAGELSPASFADFS 232
>gi|224008602|ref|XP_002293260.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971386|gb|EED89721.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 364
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 181/355 (50%), Gaps = 19/355 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQPIRRY 66
I L + + P+WL RQAGR+LPEY++ ++K ++FLDM PE E T+QP+RRY
Sbjct: 2 IRAALGRSTVERTPVWLFRQAGRHLPEYQEYKQKTGRSFLDMLSYPEDVAECTMQPVRRY 61
Query: 67 NFDAAILFSDILVIADALGRNVRF-----VENEGPRMDPITTQEIYLLNPNID--LFLNY 119
+ DAAILFSDILVIA+A+ V ++ P P +E ++ L
Sbjct: 62 DVDAAILFSDILVIAEAMNVKVTMPGGVGIQVPAPICGPADMKERLPAAEELNEQFVLER 121
Query: 120 LLPIFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L + +S+ ++R ++ I LIGF APWT+ YM+ G K+ + ++ A
Sbjct: 122 LGHVIESVKLIRTQMRKEDISIPLIGFSAAPWTLMYYMVGGSSKKNTHIGIEWLNEHPEA 181
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
L+D L+ V EY+ Q+ AG ++Q+F+ + E F +A ++ +I ++ +
Sbjct: 182 STKLMDMLTTVVIEYMSEQVKAGAHMLQLFEAMGMMIDEPNFNKFAMPALEKISKELKSR 241
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
YP+ + FA+GA + + +L + + +D SV S A + + +QGN DP L+
Sbjct: 242 YPDVPLMVFARGASFANEQLSKL-GYDVVTIDGSVDRSTARDVVGGRAGLQGNYDPRELI 300
Query: 296 VGN------QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + +L+ LG I NLG G+ + + V + VK V E
Sbjct: 301 ADHDGGRTKETVRKTTRELLEALGPQRLIANLGEGLGGKESTELVNEFVKAVHEE 355
>gi|270488927|ref|ZP_06206001.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM D27]
gi|270337431|gb|EFA48208.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM D27]
Length = 268
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 143/262 (54%), Gaps = 9/262 (3%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE K + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + L P+ +
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGY---VMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQT 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 178 LHLLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRE 237
Query: 237 YPNAK--FISFAKGAGYMLKNY 256
+ F KG G K +
Sbjct: 238 NEGRRVPVTLFTKGGGRGWKRW 259
>gi|169826007|ref|YP_001696165.1| uroporphyrinogen decarboxylase [Lysinibacillus sphaericus C3-41]
gi|168990495|gb|ACA38035.1| Uroporphyrinogen decarboxylase [Lysinibacillus sphaericus C3-41]
Length = 362
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 185/352 (52%), Gaps = 13/352 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G P+W MRQAGR EYR I++K+ + ++ + PE +T
Sbjct: 14 MTTFNDTLLRAARGEKTTHTPVWYMRQAGRSQAEYRAIKEKY-SLEEITHQPELCAYVTR 72
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + + ++ +
Sbjct: 73 LPVENYNVDAAILYKDIVTPLPGIGIDVKIKAGVGPVISNPI--RSVADVDNLGEFNAKE 130
Query: 120 LLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
P + ++I IL ++ N + LIGF GAP+T+ASYMI GG +++ + + F +A+
Sbjct: 131 HTPFVLETIKILTEEQLN-VPLIGFAGAPFTLASYMIEGGPSRNYNKTKSFMVSEPQAWF 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D+ + AQI AG IQ+FD+ G L ++ + + RI + ++++
Sbjct: 190 ALMDKLADMIIADVTAQIKAGAKAIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE-- 247
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++ K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 248 NVPLIQFGVGASHLAKEWNDLP-IDVVGLDWRLPIKEARTNGITKPVQGNLDPSLLLADW 306
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDP---KNVLDLVKTVRSEKI 346
V+ I+D P IFNLGHG+ P+VDP K + L+ +++I
Sbjct: 307 SVIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDPAVLKRLTTLIHEYSAQQI 358
>gi|133723193|gb|ABO37843.1| uroporphyrinogen decarboxylase [Pseudomonas pseudoalcaligenes]
Length = 233
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 134/233 (57%), Gaps = 11/233 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-----QEIYLLNPNIDLFL 117
RY DAAILFSDIL I DA+G+ + F EGPR + + + + + +P DL
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLFFETGEGPRFKKVVSSLADIEALPIPDPEKDL-- 122
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y + ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A
Sbjct: 123 GY---VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAL 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
+ LL+ L+ YL QI AG +QIFD+ G L ++ ++ R + +I+
Sbjct: 180 HALLEKLAQSVTAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLRYMKQIV 232
>gi|15613765|ref|NP_242068.1| uroporphyrinogen decarboxylase [Bacillus halodurans C-125]
gi|20138005|sp|Q9KDL0|DCUP_BACHD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|10173818|dbj|BAB04921.1| uroporphyrinogen III decarboxylase [Bacillus halodurans C-125]
Length = 344
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 189/348 (54%), Gaps = 17/348 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L+ +G V + P+W MRQAGR PEYR+I++K+ F ++ PE +T
Sbjct: 3 NSFNDTFLKACKGEVHDHVPVWYMRQAGRSQPEYRKIKEKYSLF-EITKQPELCAYVTKL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLF 116
P+ +YN DAAIL+ DI+ +G +V +GP +D PI + + + + P D+
Sbjct: 62 PVDQYNNDAAILYKDIMTPLPFIGVDVEIKTGKGPVIDNPIQSYADVERLGTIQPEEDV- 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
Y+L +I +LR++L + LI F GAP+T+ASYMI GG K + + + F Y +A
Sbjct: 121 -PYVL---DTIKLLREQL--TVPLISFAGAPFTLASYMIEGGPSKSYNKTKAFMYAEPKA 174
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
++ L+D L +++ Y+ AQI AG IQIFD+ G L ++ + + R S ++++
Sbjct: 175 WHLLMDKLGEMTITYVKAQIAAGAQAIQIFDSWVGTLNVQDYRVFVKPVMERTFSELQKE 234
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
I F GA +++ + L + +GLDW + + A EL VQGNLDP L+
Sbjct: 235 --KVPLIMFGVGASHLVNEWNDLP-LDVVGLDWRLQIKEARELGVTKTVQGNLDPAILLA 291
Query: 297 GNQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+V+ ILD L + FIFNLGHG+ P+V+P + L V
Sbjct: 292 PWEVIEARAKEILDQGLETPNFIFNLGHGVFPEVEPDTLKRLTAFVHE 339
>gi|269126005|ref|YP_003299375.1| uroporphyrinogen decarboxylase [Thermomonospora curvata DSM 43183]
gi|268310963|gb|ACY97337.1| uroporphyrinogen decarboxylase [Thermomonospora curvata DSM 43183]
Length = 354
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 167/331 (50%), Gaps = 24/331 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R+ L+ C PE VE+TLQP+RRY DAAI FSDI+V
Sbjct: 32 PVWFMRQAGRSLPEYLRVREGVP-MLEACARPELIVEITLQPLRRYAVDAAIFFSDIVVP 90
Query: 81 ADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G + GP + DPI + + L P+ ++ +++ L +L
Sbjct: 91 LKAIGIELDIKPGVGPVVADPIRDRAGIAALRRLTPDDVPYVT------EAVGELVGEL- 143
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF G P+T+ASY+I GG K+H + + Y + L+ L+D++A++L Q
Sbjct: 144 GDTPLIGFAGGPFTLASYLIEGGPSKNHDRTKAMMYGAPELWAELMGRLADITADFLKVQ 203
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG IQ+FD+ G +G ++ RI A+ I F G G +L
Sbjct: 204 IAAGASAIQLFDSWVGAVGPEDYRASVLPYTRRIFEAIEPL--GVPRIHFGVGTGELL-G 260
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++ +G+DW VPL A L + +QGNLDP L +V+ DVL
Sbjct: 261 LMGEAGADVVGVDWRVPLDEAVLRVGPGKALQGNLDPAVLFAPWEVIEQRAR---DVLQR 317
Query: 315 G----PFIFNLGHGITPQVDPKNVLDLVKTV 341
G IFNLGHG+ P DP + L V
Sbjct: 318 GRTAEGHIFNLGHGVLPSTDPDRLARLADLV 348
>gi|297823981|ref|XP_002879873.1| hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp.
lyrata]
gi|297325712|gb|EFH56132.1| hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 185/349 (53%), Gaps = 25/349 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQP + +
Sbjct: 56 LLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP-----NIDLFLNYL-- 120
D ILFSDIL + V+ +GP + NP ++D ++
Sbjct: 116 PDGVILFSDILTPLSGMNIPFDIVKGKGP----------IIFNPPQSAADVDQVREFIPE 165
Query: 121 --LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+P + +++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ +
Sbjct: 166 ESVPYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVL 225
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL + Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +
Sbjct: 226 HALLQKFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTH 285
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
PN I +A G+G +L+ R T + + LDW+V ++ + L ++ VQGN+DP L
Sbjct: 286 PNLPLILYASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDLAVQGNVDPGVLFG 344
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + ++ + G I NLGHGI TP+ + + ++ + +R
Sbjct: 345 SKEFITSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQGIR 393
>gi|255513655|gb|EET89920.1| uroporphyrinogen decarboxylase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 346
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 172/333 (51%), Gaps = 9/333 (2%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G + P+W MRQAGRYLPEY +I K +N LD+ P + E+T+ P+ + DAAIL
Sbjct: 15 GKHVERHPVWFMRQAGRYLPEYSKI-KGARNVLDVQSDPLASSEITVLPVDKLGVDAAIL 73
Query: 74 FSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP-IFQSISILRK 132
++DI++ A G VR EN GP MD E L P + P + ++I ++
Sbjct: 74 YADIMIPIRAAGLGVRIEENIGPVMD-FAVGEPDDLAPLERFSCDRDAPYVLENIVRTKE 132
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
KL + LIGF P+T+ SY++ G + + R + ++ +D + ++ YL
Sbjct: 133 KLAGRVPLIGFAAGPFTLLSYLLEGRPSRTFDRCRAIIQDDPDLWSRFMDMAASMTIRYL 192
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
+Q+ GVD +QIFD+ AG L + + RI+ ++ P I F+ + +
Sbjct: 193 RSQVRTGVDAVQIFDSWAGFLEPEVYRKHVLEHTKRIVDEIKGIVP---IIHFSARSSGI 249
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV 311
+++ R L D I + V L A G +QGNLDP V G M+ ++ILD
Sbjct: 250 MRDLREL-DCEVISIGPDVELKLARSALGNGKSLQGNLDPSMAVRGGAEMLARTDSILDE 308
Query: 312 L-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G F+FNLGHG+ P+N++ +V+ V++
Sbjct: 309 MDGVDGFVFNLGHGVAKDTPPENLMKIVERVKA 341
>gi|217072424|gb|ACJ84572.1| unknown [Medicago truncatula]
Length = 389
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 189/353 (53%), Gaps = 21/353 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQ
Sbjct: 45 NATEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQ 104
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP + DP+ + +D ++
Sbjct: 105 PWKVFQPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPVHSAG------QVDQVREFI 158
Query: 121 ----LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+P + +++SILRK++ N ++GF GAP+T+ASY++ GG K + + A+ +
Sbjct: 159 PEESVPYVGEALSILRKEVDNKSAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPK 218
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL + A Y+ Q G +QIFD+ A L +FE ++ + +II V++
Sbjct: 219 ILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFERFSLPYLKQIIDTVKK 278
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPM 292
+P I +A G+G +L+ LT + + LDW+V + A ++ GP +QGN+DP
Sbjct: 279 SHPELPLILYASGSGGLLERIA-LTGVDVVSLDWTVDM--ADGRRRLGPNVAIQGNVDPG 335
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
L +++ D ++ + G G I NLGHGI TP+ + + ++ K ++
Sbjct: 336 VLFGSKELITDRIHDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGIK 388
>gi|238019893|ref|ZP_04600319.1| hypothetical protein VEIDISOL_01769 [Veillonella dispar ATCC 17748]
gi|237863417|gb|EEP64707.1| hypothetical protein VEIDISOL_01769 [Veillonella dispar ATCC 17748]
Length = 340
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 172/327 (52%), Gaps = 9/327 (2%)
Query: 11 VLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y DA
Sbjct: 1 MIQGKNPGVTPVWYMRQAGRSQTEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGVDA 59
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQSIS 128
AIL+ DI+ + V GP + PI + ++ L+ ++Y I ++I+
Sbjct: 60 AILYKDIMSPMVGMNVKVELKAGVGPVFNTPIRSMVDVDKLDAFDPTKVDY---IGKTIT 116
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D+S
Sbjct: 117 LLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDVWNALMTKLADMS 175
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
EYL Q AG + +QIFD+ G + +++ + RII V+ +YP+ G
Sbjct: 176 IEYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKERYPHLPMAMNGVG 235
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+++ + L + I LDW + A E VQGNLDP L + + V+ I
Sbjct: 236 TDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFADEKTLAHEVDRI 294
Query: 309 -LDVLGSGPFIFNLGHGITPQVDPKNV 334
LD + G IFNLGHG+ P+ DPK +
Sbjct: 295 LLDGVRYGRHIFNLGHGVFPEADPKKL 321
>gi|261408414|ref|YP_003244655.1| uroporphyrinogen decarboxylase [Paenibacillus sp. Y412MC10]
gi|261284877|gb|ACX66848.1| uroporphyrinogen decarboxylase [Paenibacillus sp. Y412MC10]
Length = 352
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 183/329 (55%), Gaps = 15/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R+ DAAIL+SDI+
Sbjct: 20 PVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVRKLGVDAAILYSDIMNP 78
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNP-NIDLFLNYLLPIFQSISILRKKLPNH 137
++G + V+N GP +D PI + ++ L P +++ L ++L ++I IL K+L
Sbjct: 79 VASIGVDFDIVKNIGPVIDNPIRSAADVEKLRPIDVEGDLGHVL---ETIRILDKEL--D 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F GAP+T+ASY+I G K++ + + Y + + L+D L D+ YL A +
Sbjct: 134 VPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDKLGDMVIAYLRAHVA 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISFAKGAGYMLKNY 256
G Q+FD+ G L +F+ + ++ RI + ++ P F + +G +L
Sbjct: 194 NGGKAFQLFDSWVGALSPKDFQTFVLPTIQRIFAELQDLSVPKIYFPGVS--SGELLPTL 251
Query: 257 RRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L+ ++ IGLDW V ++ L+ + VQGNLDP L V+ I+D
Sbjct: 252 TDLS-TDVIGLDWRVSITEGRRRLEHKYAVQGNLDPTVLTGPMPVIQQYAKEIIDQGIQE 310
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P F+FNLGHG+ P+ + + +L +
Sbjct: 311 PGFVFNLGHGLFPEASLEKLRELTSYIHE 339
>gi|15226690|ref|NP_181581.1| HEME2; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|6014937|sp|O22886|DCUP2_ARATH RecName: Full=Uroporphyrinogen decarboxylase 2, chloroplastic;
Short=UPD2; Short=URO-D2; Flags: Precursor
gi|2651307|gb|AAB87587.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|23297097|gb|AAN13092.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|330254743|gb|AEC09837.1| Uroporphyrinogen decarboxylase 2 [Arabidopsis thaliana]
Length = 394
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 184/342 (53%), Gaps = 11/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQP + +
Sbjct: 56 LLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDIL + V+ +GP + P + ++ + + +P +
Sbjct: 116 PDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVR---EFVPEESVPYVG 172
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ + + LL
Sbjct: 173 EALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKF 232
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +PN I
Sbjct: 233 TTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLIL 292
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+A G+G +L+ R T + + LDW+V ++ + L ++ VQGN+DP L + +
Sbjct: 293 YASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITS 351
Query: 304 GVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
++ + G I NLGHGI TP+ + + ++ + +R
Sbjct: 352 RIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQEIR 393
>gi|87303283|ref|ZP_01086076.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 5701]
gi|87282178|gb|EAQ74139.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 5701]
Length = 352
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 177/333 (53%), Gaps = 12/333 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++QP R +
Sbjct: 8 LLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSEQPDLSYEISMQPYRAFQ 67
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDIL +G + +E++GP +DP T ++ L P L LP +
Sbjct: 68 PDGVILFSDILTPLPGMGIDFDIIESKGPIIDPPIRTLAQVEALRP---LEPAASLPFVG 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ + LR+ + N ++GF GAPWT+A+Y + G K++ + A+Q + LL L
Sbjct: 125 EVLGRLRQSVGNGAAVLGFVGAPWTLAAYAVEGRSSKNYAVIKAMAFQEPALLHRLLGLL 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y+ QI +G V+Q+FD+ AG L +F+ +AA R++ V+ K+P+ I
Sbjct: 185 ADSIAAYVSYQIESGAQVVQLFDSWAGQLSPIDFDVFAAPYQKRVVDQVKAKHPDTPLIL 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ T + I LDW+V ++ L + VQGN+DP L+ G I
Sbjct: 245 YISGSAGVLERM-ATTGVDFISLDWTVDMADGCARLPQHLGVQGNVDP-GLLFGTPEAIR 302
Query: 304 G--VNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
V+ +L G I NLGHGI P +N
Sbjct: 303 ARIVDTVLKARGRR-HILNLGHGILPGTPEENA 334
>gi|225448635|ref|XP_002274385.1| PREDICTED: similar to Uroporphyrinogen decarboxylase, chloroplastic
[Vitis vinifera]
Length = 459
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 180/332 (54%), Gaps = 12/332 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++L
Sbjct: 47 INATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISL 106
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDL 115
QP + + D ILFSDIL + ++ +GP + +P+ T +++ P
Sbjct: 107 QPWKVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPE--- 163
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + ++++ILRK++ N ++GF GAP+T+ASY++ GG K + + A+ +
Sbjct: 164 --DSVPYVGEALTILRKEVDNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPK 221
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL + A+Y+ Q G +QIFD+ A L +FE ++ + +I+ +V++
Sbjct: 222 VLHALLQKFTTSMAKYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQ 281
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
+PN I +A G+G +L+ LT + + LDW+V ++ L + VQGN+DP L
Sbjct: 282 THPNLPLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVL 340
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
+ + + +N + G G I NLGHGI
Sbjct: 341 FGSKEFITNRINDTVRKAGKGKHILNLGHGIC 372
>gi|329940181|ref|ZP_08289463.1| uroporphyrinogen decarboxylase [Streptomyces griseoaurantiacus
M045]
gi|329301007|gb|EGG44903.1| uroporphyrinogen decarboxylase [Streptomyces griseoaurantiacus
M045]
Length = 353
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 175/330 (53%), Gaps = 18/330 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEY ++R L+ C PE E+TLQP+RR++ DAA+ +SDI+V
Sbjct: 31 PVWFMRQAGRSLPEYHEVRAGIP-MLEACAMPELVAEITLQPVRRHHVDAAVFYSDIVVP 89
Query: 81 ADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G ++ GP + PI T+ ++ L DL + + +++ IL ++L
Sbjct: 90 LKAIGVDLDIKPGVGPVVAQPIRTRADLAQLR---DLTPEDVSYVTEAMGILVREL-GPT 145
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG ++H + Y + + + LLD L+++++ +L QI A
Sbjct: 146 PLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPQLWADLLDRLAEIASAFLKVQIAA 205
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISFAKGAGYMLKNYR 257
G +Q+FD+ G L ++ + +++ +V P F + L
Sbjct: 206 GASAVQLFDSWVGALSPADYRRSVFPASAKVLESVAGLGVPRIHFGAGTG----ELLGLL 261
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILD-VLG 313
++ +G+DW VPL A ++ GP +QGNLDP L V+ +LD G
Sbjct: 262 GEAGADVVGVDWRVPLDEA--ARRVGPGKALQGNLDPAILFAPTAVVEAKAQEVLDAAAG 319
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHG+ P DP + LV+ V +
Sbjct: 320 LEGHVFNLGHGVLPATDPDALTRLVEYVHT 349
>gi|315648525|ref|ZP_07901624.1| uroporphyrinogen decarboxylase [Paenibacillus vortex V453]
gi|315276219|gb|EFU39565.1| uroporphyrinogen decarboxylase [Paenibacillus vortex V453]
Length = 352
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 183/329 (55%), Gaps = 15/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R+ DAAIL+SDI+
Sbjct: 20 PVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVRKLGVDAAILYSDIMNP 78
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNP-NIDLFLNYLLPIFQSISILRKKLPNH 137
++G + V+N GP +D PI + ++ L P +++ L ++L ++I IL K+L
Sbjct: 79 VASIGVDFDIVKNIGPVIDNPIRSAADVEKLRPIDVEGDLGHVL---ETIRILDKEL--E 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F GAP+T+ASY+I G K++ + + Y + + L+D L D+ YL A +
Sbjct: 134 VPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDKLGDMVIAYLRAHVA 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-PNAKFISFAKGAGYMLKNY 256
G Q+FD+ G L +F+ + ++ RI + ++ + P F + +G +L
Sbjct: 194 NGGKAFQLFDSWVGALSPQDFQTFVLPTIKRIFAELQDLHVPKIYFPGVS--SGELLPTL 251
Query: 257 RRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L+ + IGLDW V ++ L+ + VQGNLDP L V+ I+D
Sbjct: 252 TDLS-VDVIGLDWRVSIAEGRRRLEHKYAVQGNLDPTVLTGPMPVIQQYAKEIIDQGIQE 310
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P F+FNLGHG+ P+ + + +L +
Sbjct: 311 PGFVFNLGHGLFPEASLEKLRELTSYIHE 339
>gi|294793134|ref|ZP_06758280.1| uroporphyrinogen decarboxylase [Veillonella sp. 6_1_27]
gi|294794828|ref|ZP_06759963.1| uroporphyrinogen decarboxylase [Veillonella sp. 3_1_44]
gi|294454190|gb|EFG22564.1| uroporphyrinogen decarboxylase [Veillonella sp. 3_1_44]
gi|294456079|gb|EFG24443.1| uroporphyrinogen decarboxylase [Veillonella sp. 6_1_27]
Length = 340
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 177/341 (51%), Gaps = 11/341 (3%)
Query: 11 VLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y DA
Sbjct: 1 MIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGVDA 59
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSIS 128
AIL+ DI+ A+ NV GP PI + ++ L ++Y I ++I+
Sbjct: 60 AILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSIADVDKLETFDPTKVDY---IAKTIT 116
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D+S
Sbjct: 117 LLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDMWNALMTKLADMS 175
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL Q AG + +QIFD+ G + +++ + RII V+ KYP+ G
Sbjct: 176 IAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMAMNGVG 235
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+++ + L + I LDW + A E VQGNLDP L + + V+ I
Sbjct: 236 TDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAREVDRI 294
Query: 309 -LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSEKI 346
LD + G IFNLGHG+ P+ DPK + L V RS +I
Sbjct: 295 LLDGVRYGRHIFNLGHGVFPEADPKKLHWLTDYVHERSREI 335
>gi|304390441|ref|ZP_07372394.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304326197|gb|EFL93442.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 376
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 33/346 (9%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 30 PVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRRHHVDAAVFFSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V + GP + P+T+ E+ L +L + I Q+ + +R++LP
Sbjct: 89 LYLAGADINIVPDRGPVLRQPLTSVAEVEKLT---ELEVTDWSVIEQAAAHVRRELPYEK 145
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHG--QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
L+GF GAP+T+ASY++ G + + R F A+N L + + +S +++ AQI
Sbjct: 146 VLLGFAGAPFTLASYLLEAGGPRRRECLETRAFVEAEPAAWNKLATWCAKLSGQFMKAQI 205
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+ G + +Q+FD+ AG L E+ +A S + P A I F G ++++
Sbjct: 206 NGGAEAVQLFDSWAGSLTASEYRQFAL----PYSSLAFQGAPGATHIHFGVGTAHLIEAM 261
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG------------------- 297
+ + +IG D + L A +QGNLDP LV
Sbjct: 262 GEIAEVVSIGSD--LGLDAAARRLPGKVLQGNLDPDLLVTAEQPAQTDSTPTDAKPTDHM 319
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q+ + + L + IFNLGHG+ P+ DP + +L + +
Sbjct: 320 EQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
>gi|219128227|ref|XP_002184319.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217404120|gb|EEC44068.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 366
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 179/354 (50%), Gaps = 17/354 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQPIRRY 66
+L G + P+WL RQAGR+LPEY+ + + KNFL++ +P E T+QPIRRY
Sbjct: 6 LLRAAVGEKVEQTPLWLFRQAGRHLPEYQDYKAQTNKNFLELLASPACVAECTMQPIRRY 65
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNI-----DLFLNY 119
+ DAAILFSDILV+ +ALG V G + +P+T+ +E++ P+I D
Sbjct: 66 DLDAAILFSDILVVPEALGIQVTMPGGVGILVPEPLTSPEEVHTRLPSIDQITPDFVQTK 125
Query: 120 LLPIFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L + +++ +R ++ I LIGF APWT+ YM+ G K+ + A
Sbjct: 126 LAHVIEAVRTIRTQMAEENKSIPLIGFSAAPWTLMYYMVGGSSKKNTELGVTWLEDYPEA 185
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL L+ + EY+ AQ+ AG V+Q+F+ + + FE +A + I ++ +
Sbjct: 186 SGDLLALLTKIVVEYMDAQVLAGAHVLQVFEAMGMMIDDVNFEKHALPCLRTIAQELKTR 245
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLV 295
+P+ + F +GA + L N + I +D SV + +L +QGN DP L+
Sbjct: 246 HPDIPLMVFCRGACH-LNNQLVGLGYDVITMDGSVDRTTVRQQLGNTVTLQGNYDPAELI 304
Query: 296 VGNQVMIDGVNA----ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
N ++ V A +L LG I NLG G+ + P+ V VK + E
Sbjct: 305 EENGKTVETVRATAKKLLQELGPQRLIANLGEGLGGKESPELVDAFVKAIHEES 358
>gi|72162298|ref|YP_289955.1| uroporphyrinogen decarboxylase [Thermobifida fusca YX]
gi|123774674|sp|Q47NN7|DCUP_THEFY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71916030|gb|AAZ55932.1| uroporphyrinogen decarboxylase [Thermobifida fusca YX]
Length = 361
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 172/331 (51%), Gaps = 18/331 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C P+ VE+TLQP+RRYN DAAI FSDI+V
Sbjct: 39 PVWFMRQAGRSLPEYRKLREGVP-MLEACARPDMIVEITLQPVRRYNVDAAIFFSDIMVP 97
Query: 81 ADALGRNVRFVENEGPRM-DPI----TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G ++ GP + +PI T+ + L P+ ++ ++I L ++L
Sbjct: 98 LKAIGVDLDIKPGVGPVVAEPIRDLAATRRLRGLEPDDVPYVT------EAIRELVRELG 151
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF G P+T+ASY+I GG + H + Y + L+ LS ++ E+L Q
Sbjct: 152 SR-PLIGFAGGPFTLASYLIEGGPSRHHEHTKALMYGAPEVWTELMRRLSAITLEFLRVQ 210
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG +Q+FD+ G L ++ I + + + I F G G +L
Sbjct: 211 IAAGASAVQLFDSWVGALSAEDYRANVLPYSSWIFAQLAEF--DVPRIHFGVGTGELLGL 268
Query: 256 YRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++ +G+DW VPL A ++ +QGNLDP L V+ + + +L +
Sbjct: 269 LSE-AGADVVGVDWRVPLDQAARRVRPHTALQGNLDPAVLFAPWSVVAERTDDVLARAKA 327
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+FNLGHG+ P DP + LV+ V ++
Sbjct: 328 AEGHVFNLGHGVLPTTDPAVLERLVEYVHTQ 358
>gi|216564|dbj|BAA02148.1| uroporphyrinogen III decarboxylase [Escherichia coli W3110]
Length = 353
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 176/352 (50%), Gaps = 19/352 (5%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILV-IADALGRNVRFVENEG--PRMDPITTQEIYLLNPNIDLF 116
LQP+RRY DA F + V IA LG ++ E PR L P+ +
Sbjct: 61 LQPLRRYPLDARSSFRYLTVPIAMGLGSSILKPEKVRVLPRQITCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV--- 233
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ +
Sbjct: 178 LHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRE 237
Query: 234 --RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLD 290
R+ P F A A M + T +A+GLDW+ ++ A + + +QGN+D
Sbjct: 238 NDGRRVPVTLFTKSATVAEAMAE-----TGCDALGLDWTTDIADARRRVGNKVALQGNMD 292
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
P L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 293 PSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAV 344
>gi|329928218|ref|ZP_08282149.1| uroporphyrinogen decarboxylase [Paenibacillus sp. HGF5]
gi|328937986|gb|EGG34386.1| uroporphyrinogen decarboxylase [Paenibacillus sp. HGF5]
Length = 352
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 182/329 (55%), Gaps = 15/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R+ DAAIL+SDI+
Sbjct: 20 PVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVRKLGVDAAILYSDIMNP 78
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNP-NIDLFLNYLLPIFQSISILRKKLPNH 137
++G + V+N GP +D PI ++ L P +++ L ++L ++I IL K+L
Sbjct: 79 VASIGVDFDIVKNIGPVIDNPIRNAADVEKLRPIDVEGDLGHVL---ETIRILDKEL--D 133
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F GAP+T+ASY+I G K++ + + Y + + L+D L D+ YL A +
Sbjct: 134 VPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDKLGDMVIAYLRAHVA 193
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISFAKGAGYMLKNY 256
G Q+FD+ G L +F+ + ++ RI + ++ P F + +G +L
Sbjct: 194 NGGKAFQLFDSWVGALSPKDFQTFVLPTIQRIFAELQDLSVPKIYFPGVS--SGELLPTL 251
Query: 257 RRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L+ ++ IGLDW V ++ L+ + VQGNLDP L V+ I+D
Sbjct: 252 TDLS-TDVIGLDWRVSIAEGRRRLEHKYAVQGNLDPTVLTGPMPVIQQYAKEIIDQGIQE 310
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P F+FNLGHG+ P+ + + +L +
Sbjct: 311 PGFVFNLGHGLFPEASLEKLRELTSYIHE 339
>gi|167998813|ref|XP_001752112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696507|gb|EDQ82845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 333
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 178/324 (54%), Gaps = 9/324 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ +K +F + + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAVYRKLAEKHPSFRERSENVDLIVEISLQPWKAFRPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHITL 140
+G E +GP ++ PI ++E + L+P IDL +N+ + +S+SILR+++ + +
Sbjct: 61 IGIPFEIDEAKGPLLETPIVSEEGLEALHP-IDLDKVNF---VGESLSILREEVGDGAAV 116
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
+GF G+PWT+A+Y++ G + + + + +Q +L L++ AEY+I Q+ AG
Sbjct: 117 LGFVGSPWTLATYIVEGKTTRTYTKIKSMTHQQPELLKSILSHLANEIAEYVIFQVKAGA 176
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
IQIFD+ G L H+++ ++ + ++++ VR P + + G G +L+ +
Sbjct: 177 QCIQIFDSWGGQLPPHQWDQWSKPYIQQLVAKVRDACPGVPLVMYINGNGGLLERMATV- 235
Query: 261 DSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
D + IGLDW++ ++ L VQGN+DP L + + + +++ G+ I
Sbjct: 236 DVDVIGLDWTIDMADGRRRLGDSIAVQGNVDPAVLFAPLPAITEAIESVVSKAGTNGHIL 295
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHG+ + V T RS
Sbjct: 296 NLGHGVLVGTPEEGVAHFFDTARS 319
>gi|50547735|ref|XP_501337.1| YALI0C01716p [Yarrowia lipolytica]
gi|49647204|emb|CAG81636.1| YALI0C01716p [Yarrowia lipolytica]
Length = 370
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 178/348 (51%), Gaps = 23/348 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL +G + PP+W+MRQAGRYLPEY ++ K ++F + C P+ E+T+QPI +
Sbjct: 12 ILRAARGEKVERPPVWMMRQAGRYLPEYHVVKGK-RDFFETCRDPKIAAEITIQPIEHFP 70
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPI 123
D AI+F+DILVI ALG V V+ GP +P+ T E I L + ++ + L
Sbjct: 71 GLIDVAIIFNDILVIPQALGMTVEMVDKVGPHFPEPLRTPEDIKRLKKSSEVVIKDCLGW 130
Query: 124 -FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+I++ R +L + L GF GAP+T+ +YM+ GG + H + + Y+ + +L
Sbjct: 131 SLDAITLTRHQLDGRVPLFGFVGAPFTLLAYMLEGGSSRMHKWTKEWLYKYPEECHEVLQ 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV--------- 233
++DV+ +YL Q+ AG ++Q+F++ G L EF+ Y+ V +I V
Sbjct: 191 RITDVAVDYLAHQVIAGAQLLQVFESTGGELTPAEFKLYSLPYVKQIRDKVPARVKELAG 250
Query: 234 ---RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD--WSVPLSFALELQKEGPVQGN 288
RK + + F + + Y L L + I LD W + + + +QGN
Sbjct: 251 DEYDRKEHDVPMVFFPRNSWYALDACCDLG-YDVISLDSSWDPAEAVKVVGDRRVTLQGN 309
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNV 334
LDP + +++ V ++ G G +I N GHG P +DP+ V
Sbjct: 310 LDPGVIYGSREMITKKVEEMIAGFGGGKQNYIINFGHGTQPMMDPEQV 357
>gi|282895841|ref|ZP_06303924.1| Uroporphyrinogen decarboxylase HemE [Raphidiopsis brookii D9]
gi|281199229|gb|EFA74096.1| Uroporphyrinogen decarboxylase HemE [Raphidiopsis brookii D9]
Length = 325
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 176/328 (53%), Gaps = 16/328 (4%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR +R+K+ +F + PE +E++LQP R + D ILFSDI+
Sbjct: 1 MMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEVSLQPWRAFQPDGVILFSDIVTPLPG 60
Query: 84 LGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G ++ E +GP + PI TQ+ ++ L+P L I Q + LR+++ +
Sbjct: 61 MGIDMDIAEGKGPIIFSPIRTQKQVDGLHPLDPETALPF-----IRQILGALRQEVGSAS 115
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
T++GF GAPWT+A+Y + G K + + A+ +S + LLD L++ A Y+ QI
Sbjct: 116 TVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDSNILHQLLDKLAESIAVYIRYQIDC 175
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G V+Q+FD+ AG L +++ +A ++ V+R +P I G+ +L+ R
Sbjct: 176 GAQVVQMFDSWAGQLSPQDYDIFALPYQKKVFELVKRTHPQTPLILLVTGSAGLLE---R 232
Query: 259 LTDSNA--IGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ S A + +DW+V ++ A L VQGNLDP L Q + + + + G+
Sbjct: 233 MATSGADILTIDWTVDMADARRRLGNNVKVQGNLDPGVLFGSKQFIRERILDTVRKAGNW 292
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I NLGHG+ P+ +NV +T ++
Sbjct: 293 GHILNLGHGVLPETPEENVAFFFETAKN 320
>gi|297627044|ref|YP_003688807.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922809|emb|CBL57387.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 632
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 175/339 (51%), Gaps = 13/339 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L +G P+W MRQAGR LPEYR R+ L+ C P ELTLQP+RR
Sbjct: 291 SALLSACRGERPARTPVWFMRQAGRSLPEYRAARES-TTMLESCLDPALAAELTLQPVRR 349
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
Y DAAI +SDI+V G +V GP + P+ +++ P L L PI
Sbjct: 350 YGVDAAIFYSDIMVPLKLAGVDVEIEPGVGPVLAHPVRSRDDIAALPT--LTDEALTPIR 407
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I + +LP+ + LIGF GAP+TVASY++ G + H + + + +A+ LL+++
Sbjct: 408 EAIGRVTTQLPD-VPLIGFAGAPFTVASYLVEGRPNRTHPRTHELMHDDPQAWEALLEWV 466
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++V +L AQ+ AG +Q+FD+ G L ++ + + GR++ A+ I
Sbjct: 467 AEVDIAFLRAQVLAGASAVQLFDSWVGELSLVDYLVHVQPASGRVLRALGEL--GVPRIH 524
Query: 245 FAKGAGYMLKNYRRL-TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F G G++L R D +G D ++ + L L P+QGN+DP L + +
Sbjct: 525 FGTGTGHLLVAMRDAGADVMGVGADLTLDAANEL-LGGRTPLQGNIDPAVLAGSPEAVDA 583
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDP---KNVLDLV 338
V A+L G+ P I NL HG+ DP +++DLV
Sbjct: 584 AVAAVLTAGGAAPAHIVNLAHGVPKDTDPDVLAHIVDLV 622
>gi|14334768|gb|AAK59562.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
Length = 394
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 183/342 (53%), Gaps = 11/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQP + +
Sbjct: 56 LLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDIL + V+ +GP + P + ++ + + +P +
Sbjct: 116 PDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVR---EFVPEESVPYVG 172
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ + + LL
Sbjct: 173 EALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQKF 232
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +PN I
Sbjct: 233 TTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPLIL 292
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
+A G+G +L+ R T + + LDW+V ++ + L ++ VQGN+DP L + +
Sbjct: 293 YASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKEFITS 351
Query: 304 GVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
++ + G I NLGHGI TP + + ++ + +R
Sbjct: 352 RIHDTVKKAGRDKHILNLGHGIKVGTPVENVAHFFEVAQEIR 393
>gi|269796868|ref|YP_003316323.1| uroporphyrinogen decarboxylase [Sanguibacter keddieii DSM 10542]
gi|269099053|gb|ACZ23489.1| uroporphyrinogen decarboxylase [Sanguibacter keddieii DSM 10542]
Length = 355
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 176/348 (50%), Gaps = 20/348 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ L+G + P+W MRQAGR LPEY R+ LD C P E+TLQP+R
Sbjct: 16 RSPLVRALRGERPDSIPVWFMRQAGRSLPEYLAAREGVA-MLDSCLDPALASEITLQPVR 74
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL-- 121
R+ DA I FSDI+V +V GP + +P+ T ++D L L
Sbjct: 75 RHQVDAGIFFSDIVVPLRLADVDVDIAPGVGPVLGEPVRTPA------DVDRLLEKTLTD 128
Query: 122 ----PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
PI ++++ +L LIGF GAP+T+A+YM+ G +DH R + + ++
Sbjct: 129 EALQPIRDAVALTVAEL-GSTPLIGFAGAPFTLAAYMVEGRPSRDHLGARRMMHTDPESW 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L + +DV+ +L AQ+ AG Q+FD+ AG L ++ + A S R ++ V +
Sbjct: 188 ARLTTWAADVTGTFLRAQVLAGTSAAQLFDSWAGSLSLADYVAHVAPSSARALTHV-QDL 246
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
P I F G G++L R + ++ +G+D+ PL A L P+QGN+DP L
Sbjct: 247 P-VPVIHFGTGTGHLLPAMRDV-GADVVGVDYRTPLDEANAMLGGTTPLQGNIDPALLGA 304
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V +++ + P + NLGHG+ P DP + +V+ V S
Sbjct: 305 PWPVLEAHVRDVVERGRTAPAHVVNLGHGVPPDTDPTVLTRVVELVHS 352
>gi|303289663|ref|XP_003064119.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226454435|gb|EEH51741.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 366
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 175/348 (50%), Gaps = 28/348 (8%)
Query: 20 PPIWLMRQA------------GRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
PP W+MRQA GRY+ EYR + K+ +F + + VE+TLQP R +
Sbjct: 21 PPAWMMRQARSISRRSPYDRAGRYMKEYRDLAVKYPSFRERSENTDLIVEITLQPWRAFQ 80
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL A+G + +GP +D PI E L +L L+ L + ++
Sbjct: 81 PDGVILFSDILTPLPAIGIPFEIDDYKGPILDQPIRDAE--GLKSLHELDLDMLPFVGEA 138
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ LRK++ + ++GF GAPWT+A+Y++ GG + + A + +L ++D
Sbjct: 139 LTELRKEVGDSAAVLGFVGAPWTLATYIVEGGSSSTYKTIKSMAMTEPDTLHAILSAVAD 198
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y+ QI AG +QIFD+ G L H +E ++ + R++ VR +P +A
Sbjct: 199 AVGTYVGYQIDAGAQCVQIFDSWGGQLPPHMWEVWSKPYIQRVVDKVRASHPGTPLTLYA 258
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ-----VM 301
G+G +L+ T + IGLDW++ + + VQGN+DP L + +
Sbjct: 259 NGSGGLLERM-ATTGVDCIGLDWTIDMEDGRRRVGDKAVQGNVDPAVLFAPPEARSSITL 317
Query: 302 IDGVN-AILDVLG-SGPF--IFNLGHGI---TPQVDPKNVLDLVKTVR 342
I V A+ DV +GP I NLGHG+ TP+ + K D K +R
Sbjct: 318 IPAVEKAVQDVCAKAGPVGHILNLGHGVLVGTPEENVKAFFDAAKKIR 365
>gi|145497837|ref|XP_001434907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402035|emb|CAK67510.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 188/340 (55%), Gaps = 19/340 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPE+++I K ++F D C P E+TLQP++++ DAAI+FSDIL +
Sbjct: 56 PIWMMRQAGRYLPEFKEIMKN-RDFFDACQDPFIAAEITLQPLKQFEIDAAIIFSDILTL 114
Query: 81 ADALGRNVRFVENEGP--RMDPITTQEI-YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G + + +GP + T +I + +P+ + L ++ ++ + R+ L
Sbjct: 115 PKAMGMEIVMDKEKGPIIKNKLETVDDINRIKSPDPE----SLEHVYDALYLTRQALQGK 170
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI- 196
TLIGFCGAP+TV SYM+ G K + + + YQ ++ ++D ++ SA+YLI Q+
Sbjct: 171 QTLIGFCGAPFTVFSYMVEGETSKMFLKTKKWLYQYTQETRKVMDLIARESAQYLINQVK 230
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK---GAGYML 253
G VIQIFD+ AG + ++ + S+ ++ +++ PN I FAK G +L
Sbjct: 231 EGGAQVIQIFDSFAGQIPPIDYIEFVIPSLRILLEGFKQECPNTPLIMFAKDQNGVEVIL 290
Query: 254 KNYRRLTDS----NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+ + LD +V ++ ++ + +QGNL+P L Q++ V+ +
Sbjct: 291 AFLKMCLGETPLIDGFQLDSNVSDDVLIKIIESDRTIQGNLEPGVLYGTQQIIKKRVSQM 350
Query: 309 LDVLGSG-PFIFNLGHGITPQVDPKNVLDLVK-TVRSEKI 346
++ L + +I NL HG+TP + + V ++ ++R K+
Sbjct: 351 IEKLQTTRRYIMNLSHGLTPDHEVEKVRQFIQESIRQSKL 390
>gi|297561774|ref|YP_003680748.1| uroporphyrinogen decarboxylase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846222|gb|ADH68242.1| uroporphyrinogen decarboxylase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 355
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 168/334 (50%), Gaps = 24/334 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R L+ C P+ E+T+QP+RRY+ DAAI FSDI+V
Sbjct: 33 PVWFMRQAGRSLPEYRRVRADVP-MLEACARPDMITEITMQPVRRYDVDAAIFFSDIVVP 91
Query: 81 ADALGRNVRFVENEGPRM-DPIT----TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G ++ GP + DPI + + + P + I +++ L +L
Sbjct: 92 LKAIGIDLDIKPGVGPVVADPIRDATGVKRLREIEPGDVPY------ITEAVGQLVGELG 145
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGF GAP+T+ASY+I GG K+H + Y ++ L+ L+ +S +L Q
Sbjct: 146 DK-PLIGFAGAPFTLASYLIEGGPSKNHEHTKALMYGEPELWDELMRRLATISLGFLRTQ 204
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG +Q+FD+ G L ++ I + + I F G G +L
Sbjct: 205 IEAGASAVQLFDSWVGALSAEDYRASVLPYTSWIFGQLAQH--EVPRIHFGVGTGELLSL 262
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
++ +G+DW VPL A++ +Q +QGNLDP L +V+ + D+L
Sbjct: 263 LSE-AGADVVGVDWRVPLDKAVQRVQPGTALQGNLDPATLFAPWEVVAERTR---DILAR 318
Query: 315 G----PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
G +FNLGHG+ P DP + L V E
Sbjct: 319 GRAADGHVFNLGHGVLPSTDPDMLQRLTAFVHEE 352
>gi|51245132|ref|YP_065016.1| uroporphyrinogen decarboxylase [Desulfotalea psychrophila LSv54]
gi|81692873|sp|Q6ANR5|DCUP_DESPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|50876169|emb|CAG36009.1| probable uroporphyrinogen decarboxylase [Desulfotalea psychrophila
LSv54]
Length = 339
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 188/343 (54%), Gaps = 16/343 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G + PIW+MRQAGRYLP Y++IR K +FL++C P VE+TLQP+
Sbjct: 6 LKACRGEKTDYTPIWMMRQAGRYLPAYQKIRGKV-SFLELCKNPALCVEVTLQPVDLLGM 64
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL++ +A+G + F E GP +PI Q L+ P+ D +++ +
Sbjct: 65 DAAILFSDILILMEAMGAKLEFNEGCGPVFPNPIKDQTALDALIIPDADDATGFVM---E 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +LR +L + LIGF GAP+T A+Y+I GG K + + + F+ +++ ++
Sbjct: 122 TIRLLRGEL--QVPLIGFAGAPFTCATYLIEGGSSKVFWETKKMMFTQPELFHGIMEKIT 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ YL AQ AG +QIFD+ AG L +FE +A V RII+++++ + I F
Sbjct: 180 QATILYLQAQARAGAQALQIFDSWAGVLAPCDFEVFALPYVRRIIASLQQF--DLPIIYF 237
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
A +L+ + ++ +GLDW + + A + +QGN+DP L++ + +
Sbjct: 238 ANNGSTLLEMSAS-SGASVLGLDWRINIGDAGKRVPGIALQGNIDPFALLLPKDKLRKRI 296
Query: 306 NAIL-DVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVRSE 344
IL D IFNLGHGI TP + +D V + +
Sbjct: 297 GTILEDAKEVKGHIFNLGHGIHQFTPPEQARIAVDAVHELSCK 339
>gi|56963303|ref|YP_175034.1| uroporphyrinogen decarboxylase [Bacillus clausii KSM-K16]
gi|56909546|dbj|BAD64073.1| uroporphyrinogen decarboxylase [Bacillus clausii KSM-K16]
Length = 350
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 17/341 (4%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ +G P+W MRQAGR PEYR+I K+ + D+ + PE +T P+ +YN
Sbjct: 11 LKACKGEKHGHVPVWYMRQAGRSQPEYRKI-KETHSLFDITHDPELCAYVTKLPVDQYNN 69
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD-PI----TTQEIYLLNPNIDLFLNYLLPI 123
DAAIL+ DI+ +G V GP +D PI + + ++P D+ +
Sbjct: 70 DAAILYKDIMTPLPFIGVEVDIKSGIGPVIDNPIHGLSDVERLGEIDPEHDV-----KHV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +LR +L + LI F GAP+T+ASYMI GG +++ + + F + A+ L+D
Sbjct: 125 LDTIKLLRTQL--DVPLISFAGAPFTLASYMIEGGPSRNYHKTKAFMHAEPEAWQRLMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++ +Y+ AQI AG IQ+FD+ G + +++ + RI++ V+ + I
Sbjct: 183 LAKMTIDYIKAQIQAGAQAIQLFDSWIGAVSVADYKRLIKPVMVRILAEVQTE--GVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G ++L ++ + + IG+DW +S A L +QGN+DP L+ V+
Sbjct: 241 LHGVGTPHLLSEWKDMP-VDVIGIDWRTTVSEARRLGINKTLQGNMDPSLLLAPWPVIEA 299
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AILD + S FIFNLG G+ P+V P+ + L V
Sbjct: 300 EAKAILDEGMESNRFIFNLGQGVFPEVKPETLRRLTAFVHE 340
>gi|302768601|ref|XP_002967720.1| hypothetical protein SELMODRAFT_408952 [Selaginella moellendorffii]
gi|300164458|gb|EFJ31067.1| hypothetical protein SELMODRAFT_408952 [Selaginella moellendorffii]
Length = 384
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 187/343 (54%), Gaps = 13/343 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G+ + PP+W+MRQAGRY+ Y+ + K+ +F + E +E++LQP + +
Sbjct: 46 LLRAVRGDSVERPPVWMMRQAGRYMKSYQDLCAKYPSFRERSENAELAIEISLQPWKAFR 105
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + + +GP + PIT+ + ++ +L +P + Q
Sbjct: 106 PDGVILFSDILTPLTGMNIPFDILAGKGPVIHKPITS--MADVDEVTELCPEEAVPYVGQ 163
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++S LR ++ N ++GF GAP+T+ASY+I GG K + + A+ + + LL L+
Sbjct: 164 ALSSLRAEVGNEAAVLGFVGAPFTLASYIIEGGSSKHFAKIKRLAFGSPEILHALLKKLA 223
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ Y+ Q G +QIFD+ A L +FE ++ + +I+S V++ +P+ I +
Sbjct: 224 ESIIIYVRYQADKGAQTVQIFDSWATHLSPIDFEQFSLPYLKQIVSEVKKTHPSLPLILY 283
Query: 246 AKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
A G+G +L+ RL S + + +DW+V ++ A + L ++ VQGN+DP L +
Sbjct: 284 ASGSGGLLE---RLGSSGVDIVSVDWTVDMAEARQRLGRDVAVQGNIDPGALFGSKDFIR 340
Query: 303 DGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
V + G G I NLGHG+ TP+ + + ++ K++R
Sbjct: 341 QRVIDTVAKAGRGKHILNLGHGVLVGTPEENVAHFFEVGKSIR 383
>gi|302761784|ref|XP_002964314.1| hypothetical protein SELMODRAFT_438672 [Selaginella moellendorffii]
gi|300168043|gb|EFJ34647.1| hypothetical protein SELMODRAFT_438672 [Selaginella moellendorffii]
Length = 393
Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 187/343 (54%), Gaps = 13/343 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G+ + PP+W+MRQAGRY+ Y+ + K+ +F + E +E++LQP + +
Sbjct: 55 LLRAVRGDSVERPPVWMMRQAGRYMKSYQDLCAKYPSFRERSENAELAIEISLQPWKAFR 114
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + + +GP + PIT+ + ++ +L +P + Q
Sbjct: 115 PDGVILFSDILTPLTGMNIPFDILAGKGPVIHKPITS--MADVDEVTELCPEEAVPYVGQ 172
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++S LR ++ N ++GF GAP+T+ASY+I GG K + + A+ + + LL L+
Sbjct: 173 ALSSLRAEVGNEAAVLGFVGAPFTLASYIIEGGSSKHFAKIKRLAFGSPEILHALLKKLA 232
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ Y+ Q G +QIFD+ A L +FE ++ + +I+S V++ +P+ I +
Sbjct: 233 ESIIIYVRYQADKGAQTVQIFDSWATHLSPIDFEQFSLPYLKQIVSEVKKTHPSLPLILY 292
Query: 246 AKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
A G+G +L+ RL S + + +DW+V ++ A + L ++ VQGN+DP L +
Sbjct: 293 ASGSGGLLE---RLGSSGVDIVSVDWTVDMAEARQRLGRDVAVQGNIDPGALFGSKDFIR 349
Query: 303 DGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
V + G G I NLGHG+ TP+ + + ++ K++R
Sbjct: 350 QRVIDTVARAGRGKHILNLGHGVLVGTPEENVAHFFEVGKSIR 392
>gi|221058188|ref|XP_002261602.1| uroporphyrinogen decarboxylase [Plasmodium knowlesi strain H]
gi|194247607|emb|CAQ41007.1| uroporphyrinogen decarboxylase, putative [Plasmodium knowlesi
strain H]
Length = 414
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 183/334 (54%), Gaps = 22/334 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEYR++R K+ +F+ MC P + E+T+ P +R++ D ++FSDIL+I
Sbjct: 84 PVWFMRQAGRYLPEYREMRAKY-DFIQMCQNPHLSSEVTIMPFKRFSCDMLVIFSDILII 142
Query: 81 ADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +V+FVEN GP+ D + +E L P ++ + L ++ SIS+ + K+ N +
Sbjct: 143 FIAMGMHVQFVENVGPKFDKTVSSFEEFQKLIPPLEQIIKNLHYVYDSISLTKHKINNAV 202
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF G+P+T+ +Y+ K + Y+ + +L+ LS+V +LI QI +
Sbjct: 203 PLLGFAGSPFTLFTYLTKNN-KKTYEDTIQMIYERPGDVHNILNKLSEVCVSHLINQIDS 261
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY------- 251
G +VIQ+F+++A + + F +++ + ++I+ V++ P+A I F K +
Sbjct: 262 GANVIQLFESNADIIDTNLFCDFSLFYLKKVINMVKKLRPHAFIILFLKENFHPDVKDLN 321
Query: 252 --MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA-- 307
+L + +N +++ + +QG LDP ++V ++ ++
Sbjct: 322 IDVLSITHKQLAANTSTFYYNL-------FDGKIILQGALDPHIMLVNDENLVSKYTCQM 374
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + +I NLGHG+ P +NV + TV
Sbjct: 375 VSQIRHTNKYIANLGHGMLPGSKIENVQAFIDTV 408
>gi|227876578|ref|ZP_03994688.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35243]
gi|307699914|ref|ZP_07636965.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris FB024-16]
gi|227842779|gb|EEJ52978.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35243]
gi|307614952|gb|EFN94170.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 17/332 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR R L C TP+ E+TLQP+RR++ DAA+ FSDI++
Sbjct: 31 PVWFMRQAGRSLPEYRAARAGV-GMLTACTTPDLVAEITLQPVRRHDVDAAVFFSDIVIP 89
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
G + V+ GP +D + + + + L ++ I + ++ R++L L
Sbjct: 90 LYLCGVGIDMVDGIGPVLDS-PVRSVADVERLVGLEVSDWSVIEDAAALGRRELAFEKVL 148
Query: 141 IGFCGAPWTVASYMISGG-----FIKDHGQNRVFAYQNSRAFNW--LLDFLSDVSAEYLI 193
+GF GAP+T+ASY+I G ++ R + + W L + + +S E+L
Sbjct: 149 LGFAGAPFTLASYLIESGQPGVSKVQRRACLRTREFMRCQPQTWAKLATWCARLSGEFLA 208
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
AQI G + +Q+FD+ G L E E+ YA + A + ++FA A ++L
Sbjct: 209 AQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK----GVNHVNFAVAASHLL 264
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI-DGVNAILDVL 312
+ D ++G D + L A E +QGNLDP L+ + I + +L
Sbjct: 265 EALGETADVVSVGTD--ISLDTAAARLPETVLQGNLDPELLIQSDSEKIWSEADKVLQAG 322
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ P IFNLGHG+ P+ DP + +LV V +
Sbjct: 323 QAAPAHIFNLGHGVKPETDPGLLTELVARVHA 354
>gi|282853363|ref|ZP_06262700.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J139]
gi|282582816|gb|EFB88196.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J139]
Length = 354
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 24/350 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 14 LLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL----P 122
D A+L+SDI+V G VR GP +D P+ T ++D +
Sbjct: 73 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTAS------DVDRITRRHVEDPSA 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + + L++
Sbjct: 127 IEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWARLME 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V PN
Sbjct: 187 WVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD---PNIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDPMRL 294
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP L
Sbjct: 244 VHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDPALL 303
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 304 FAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|314982573|gb|EFT26665.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA3]
gi|315091098|gb|EFT63074.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA4]
Length = 353
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 24/350 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL----P 122
D A+L+SDI+V G VR GP +D P+ T ++D +
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTAS------DVDRITRRHVEDPSA 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + + L++
Sbjct: 126 IEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWARLME 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V PN
Sbjct: 186 WVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD---PNIPV 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDPMRL 294
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP L
Sbjct: 243 VHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDPALL 302
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 303 FAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|315654430|ref|ZP_07907338.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
gi|315491465|gb|EFU81082.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
Length = 376
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 170/346 (49%), Gaps = 33/346 (9%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 30 PVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRRHHVDAAVFFSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+T+ EI L +L + I Q+ + +R++LP
Sbjct: 89 LYLAGADINIVPGRGPVLRQPLTSVAEIEKLT---ELEVTDWSVIEQAAAHVRRELPYEK 145
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHG--QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
L+GF GAP+T+ASY++ G + + R F A+N L + + +S +++ AQI
Sbjct: 146 VLLGFAGAPFTLASYLLEAGGPRRRECLETRAFIEAEPAAWNKLATWCAKLSGQFMKAQI 205
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+ G + +Q+FD+ AG L E+ +A R A + F G ++++
Sbjct: 206 NGGAEAVQLFDSWAGSLTASEYRQFALPYSSLAFQGAR----GATHVHFGVGTAHLIEAM 261
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG------------------- 297
+ + +I D + L A +QGNLDP LV
Sbjct: 262 GEIAEVVSISSD--LGLDVAARRLPGKVLQGNLDPDLLVTAEQSAQTDSTSTDAKPTDHM 319
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q+ + + L + IFNLGHG+ P+ DP + +L + +
Sbjct: 320 EQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
>gi|315657644|ref|ZP_07910526.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492116|gb|EFU81725.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 376
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 43/351 (12%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 30 PVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRRHHVDAAVFFSDIVVP 88
Query: 81 ADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G ++ V GP + P+T+ EI L +L + I Q+ + +R++LP
Sbjct: 89 LYLAGADINIVPGRGPVLRQPLTSVAEIEKLT---ELEVTDWSVIEQAAAHVRRELPYEK 145
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHG--QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
L+GF GAP+T+ASY++ G + + R F A+N L + + +S +++ AQI
Sbjct: 146 VLLGFAGAPFTLASYLLEAGGPRRRECLETRAFIEAEPAAWNKLATWCAKLSGQFMKAQI 205
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+ G + +Q+FD+ AG L E+ +A R A + F G ++++
Sbjct: 206 NGGAEAVQLFDSWAGSLTASEYRQFALPYSSLAFQGAR----GATHVHFGVGTAHLIEAM 261
Query: 257 RRLTD----SNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVG-------------- 297
+ + S+ +GLD A + G V QGNLDP LV
Sbjct: 262 GEIAEVVSISSDLGLD-------AAARRLPGKVLQGNLDPDLLVTAEQSAQTDSTPTDAK 314
Query: 298 -----NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q+ + + L + IFNLGHG+ P+ DP + +L + +
Sbjct: 315 PTDHMEQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
>gi|302782237|ref|XP_002972892.1| hypothetical protein SELMODRAFT_231982 [Selaginella moellendorffii]
gi|300159493|gb|EFJ26113.1| hypothetical protein SELMODRAFT_231982 [Selaginella moellendorffii]
Length = 338
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 172/324 (53%), Gaps = 9/324 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ K +F + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAAYRKLADKHPSFRKRSEETDLIVEISLQPWKAFMPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + +GP + DP+ + E +IDL + L + S+ LR+++ N ++G
Sbjct: 61 IGVEFEIDDAKGPIISDPVVSVERASQLHSIDL--SRLEFVGDSLRTLRREVGNGAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y+I G + + + + Y+N +LD L++ +YL+ QI +G
Sbjct: 119 FVGAPWTLATYLIEGRSTRTYKKIKGMCYENPELLESILDHLANAIGDYLVFQIQSGAQC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFD+ G L +++ ++ + ++I V+ K P + +A G G +L+ R++D+
Sbjct: 179 VQIFDSWGGQLTPVQWDRWSKPYICKMIRTVKDKCPGVPIVLYANGNGGLLE---RMSDT 235
Query: 263 NA--IGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
A IGLDW+V L L VQGN+DP L + + V ++ G+ I
Sbjct: 236 GAHVIGLDWTVDMLDGRKRLGDSVAVQGNVDPCVLFGPEWSITEAVVDVVRKAGNKGHIL 295
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHG+ ++V +T RS
Sbjct: 296 NLGHGVLVGTPEESVAHFFQTARS 319
>gi|13542123|ref|NP_111811.1| uroporphyrinogen decarboxylase [Thermoplasma volcanium GSS1]
gi|14325554|dbj|BAB60457.1| uroporphyrinogen decarboxylase [Thermoplasma volcanium GSS1]
Length = 332
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/340 (32%), Positives = 173/340 (50%), Gaps = 20/340 (5%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
L+ L G + P+W MRQAGRYL Y+ RKK M + V++T P+
Sbjct: 5 LKALHGLDHDYIPVWFMRQAGRYLNVYKDYRKKL-GLEGMMTDADVIVKITHSPVDMIGV 63
Query: 69 DAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+F+DI LG VRF +N GP ++ ++ +N + N+ P+ ++I
Sbjct: 64 DAAIIFADITTPLPGLGFKVRFEDNVGPIVLNNLSDNGFSGINEFDEASFNH--PVLKAI 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S+ R+ LIGFCG+P T+ SY+I+G F KD + + + + + L+D
Sbjct: 122 SMYREMYRE--PLIGFCGSPVTLLSYLIAGSFDKDLAKTKRLMLTDPSKYKEISTLLTDA 179
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF----I 243
S +Y QI GVD Q+FD+ AG L +++ +A + I+S + K P F
Sbjct: 180 SVKYAKLQIKKGVDAFQLFDSWAGYLSPRQYKEFAVPYINDILSEIAGKVPTIYFSTMTS 239
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
SF +G + S+ I +DW V + ++ + +QGNLDP +V + +
Sbjct: 240 SFVFQSGII---------SDFISVDWRVEMDKVVKESGDYGLQGNLDPF-IVNYDYAFAE 289
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I V G+ +IFN GHGI P DPK ++++VK V S
Sbjct: 290 SEHIINAVKGNNRYIFNTGHGILPDTDPKRLIEIVKYVHS 329
>gi|313814510|gb|EFS52224.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL025PA1]
gi|314922349|gb|EFS86180.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL001PA1]
gi|314965340|gb|EFT09439.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL082PA2]
gi|315094184|gb|EFT66160.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL060PA1]
gi|315104840|gb|EFT76816.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA2]
gi|327329285|gb|EGE71045.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL103PA1]
Length = 366
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 24/350 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 26 LLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 84
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL----P 122
D A+L+SDI+V G VR GP +D P+ T ++D +
Sbjct: 85 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTAS------DVDRITRRHVEDPSA 138
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + + L++
Sbjct: 139 IEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWARLME 198
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V PN
Sbjct: 199 WVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD---PNIPV 255
Query: 243 ISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDPMRL 294
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP L
Sbjct: 256 VHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDPALL 315
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 316 FAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 365
>gi|308068453|ref|YP_003870058.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa E681]
gi|305857732|gb|ADM69520.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa E681]
Length = 348
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 178/329 (54%), Gaps = 15/329 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+I++K+ L++C PE E+TL P+R+ DAAIL+SDI+
Sbjct: 20 PVWYMRQAGRYDPEYRKIKEKY-TLLEICRQPELAAEVTLMPVRKLGVDAAILYSDIMNP 78
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+LG + V+N GP +D PI + ++ L P ID+ + L I ++I IL ++L ++
Sbjct: 79 VASLGVDFDIVKNIGPVIDNPIRSAADVDKLRP-IDVERD-LGHILETIRILDREL--NV 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LI F GAP+T+ASY+I G K + + + Y ++ L+D L D+ Y+ A I
Sbjct: 135 PLITFAGAPFTIASYLIEGRPSKGYIRTKAMMYGEPELWHRLMDKLGDMVITYVRAHIAN 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-KYPNAKFISFAKGAGYMLKNYR 257
G Q+FD+ G L ++F+ + ++ RI + P F + G +L +
Sbjct: 195 GGKAFQLFDSWVGALSPYDFQTFVLPTITRIFHELSDLDVPKIYFPGVSSGE--LLPHLN 252
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILD--VLGS 314
L ++ IGLDW V + G VQGNLDP L V+ I+D +L
Sbjct: 253 GLK-ADVIGLDWRVSIPEGRRRLGNGFGVQGNLDPYVLTAPIDVIKQYAKKIIDEGILEP 311
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +IFNLGHG+ P+ + +L + V
Sbjct: 312 G-YIFNLGHGLFPEASLDKLRELTEYVHE 339
>gi|322368533|ref|ZP_08043101.1| uroporphyrinogen decarboxylase [Haladaptatus paucihalophilus DX253]
gi|320551817|gb|EFW93463.1| uroporphyrinogen decarboxylase [Haladaptatus paucihalophilus DX253]
Length = 334
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 24/344 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G PP+WLMRQAGRY+PEYR IR+++ F + PE +TL P +
Sbjct: 5 LVRAARGERTERPPVWLMRQAGRYIPEYRDIREQY-TFKEAIKNPEVAERITLLPWELFE 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-----QEIYLLNPNIDLFLNYLL 121
D ++FSDIL + + LG + R GP + +P+T E + ID ++ LL
Sbjct: 64 PDGLVMFSDILTVLEPLGFDYRIESGVGPVVSNPVTDPGDVPTEFADVATEID-YVGDLL 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
QS + + ++IGF G P+T+ASY++ G R F + AF LL
Sbjct: 123 ARLQS------SIGDETSIIGFSGGPYTLASYVV-GDEPTSRKPIRRFRTNHPEAFRDLL 175
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+DV EY+ Q+ G DV+Q+FDT AG L ++ + RI A+ +
Sbjct: 176 SMFTDVVEEYVRYQVEQGADVVQVFDTWAGVLTPDDYREFVLPLHQRIFDAI-----DVP 230
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I FA+ G L + + ++ +GLDW+V ++ A E + PVQGNLDP L+ + +
Sbjct: 231 SIVFARHPGGKL-DLLAESGADVVGLDWTVDMADAREQLGDTPVQGNLDPSYLLGSPEFV 289
Query: 302 IDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + +++ G I NLGHGI TP + +D K +
Sbjct: 290 KEKTHEVIEKAGDSGHILNLGHGIDRTTPVENATAFVDAAKEIE 333
>gi|302833982|ref|XP_002948554.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300266241|gb|EFJ50429.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 411
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 174/337 (51%), Gaps = 12/337 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G P+WLMRQAGRY+ +R+ K+ F TP+ +EL+LQP+R +
Sbjct: 46 LLRVARGEDAERTPVWLMRQAGRYMAAFREFSDKYP-FRMRSETPDIAIELSLQPLRAFR 104
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I FSDIL +G V+ +GP + +P+ + E + L P D LP Q
Sbjct: 105 PDGIIFFSDILTPLPGMGIEFDMVKGKGPVIANPVRSAEHLRQLVPLSDPASR--LPFIQ 162
Query: 126 SI-SILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA--YQNSRAFNWLL 181
I S LR++ + +TL+GF G PWT+A+Y + G KD + +V+ + N + L
Sbjct: 163 KILSTLRQEADSEGVTLLGFIGTPWTLAAYAMEGKADKDCKETKVWKIMFHNPALLHSFL 222
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
DFL++ Y QI +G VIQ+FD+ A L +F ++ RI A++ KYP+
Sbjct: 223 DFLTEQLIVYAGYQIESGAQVIQLFDSWAHHLSPAQFAEFSMPYAERITRALKAKYPHVP 282
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQV 300
I A G L+ + T ++ +GLDW+V + A G VQGN+DPM L +
Sbjct: 283 VIFHANGGTGKLELMKE-TAADVVGLDWAVDMKDARATLGHGVKVQGNVDPMSLFGPEEH 341
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ V L G I N+GHG+ Q P++ + L
Sbjct: 342 IRVEVERCLRAAGPRGHILNVGHGVV-QGTPESSVAL 377
>gi|313903429|ref|ZP_07836820.1| uroporphyrinogen decarboxylase [Thermaerobacter subterraneus DSM
13965]
gi|313466250|gb|EFR61773.1| uroporphyrinogen decarboxylase [Thermaerobacter subterraneus DSM
13965]
Length = 356
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 174/347 (50%), Gaps = 16/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
Q+ L + ++ P+W MRQAGR PE+R +R+++ F+++ P+ E+T+ P+
Sbjct: 4 SQRFLAACRRQPVDRTPVWFMRQAGRIFPEFRALRRQY-GFVELMQHPDLCAEITVMPVE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNIDLFLNY 119
R DAAILF+DI+ LG + R GP + P+ + +P
Sbjct: 63 RLGVDAAILFADIMTPLAPLGVDYRIEPGVGPVVGQPLAAAADLGRLRRFDPR-----EE 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+ +++ ++R+ L + + LIGF GAP+T+A Y+I G ++ + R Y + ++
Sbjct: 118 LAPVLETVRLVRRALGDRVPLIGFAGAPFTLACYLIEGRPSREFHRARALMYGDPAFWHG 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L++ +YL AQ+ AGV +Q+FD+ G LG + + R++ +
Sbjct: 178 LMERLAETVLDYLRAQVEAGVQAVQLFDSWVGGLGPAAYRRFVLPYSSRVLEGLADL--G 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG- 297
I F G +L + +G+DW V L A E + + +QGNLDP L+
Sbjct: 236 VPRIHFGTGNAALLPLMAE-AGAEVVGVDWRVDLDRAWEAIGPDKAIQGNLDPAALLAPF 294
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+QV + + G IFNLGHG+ P+ ++ LV+ V E
Sbjct: 295 DQVEEQARDVLRRAAGRPGHIFNLGHGVLPETPVDHLRRLVELVHRE 341
>gi|219120415|ref|XP_002180946.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217407662|gb|EEC47598.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 431
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 173/342 (50%), Gaps = 12/342 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P+W+MRQAGRY+ +R+ F + TP+Y VEL+LQ R Y
Sbjct: 86 LVRAARGETVERTPVWMMRQAGRYMEAFREYSDVLP-FRERSETPDYAVELSLQCHRAYG 144
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D I+FSDIL LG + V+ GP + E + N F + + I + +
Sbjct: 145 MDGIIMFSDILTPLPTLGIDFDVVKGTGPVITTKVRTEEDVNNMPRHEFDDKVPFIKEIL 204
Query: 128 SILRKKLPN-HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN----WLLD 182
+ L ++ + + +LIGF GAP+T+A+Y I G KD + + R N LD
Sbjct: 205 NRLSQEAEDANTSLIGFVGAPFTLAAYTIEGKSSKDCLTTKKLLMADERGDNACISLFLD 264
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D+ +Y QI G VIQ+F++ A L H FE YA + + I ++ +YP+
Sbjct: 265 KLADMIGDYACYQIEHGAQVIQVFESWAHQLSPHWFETYAKPAAQKAIRKIKSQYPDTPV 324
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FA G L+ R + ++ I +DW+V LS A L + PV GNLDP L + +
Sbjct: 325 IYFANGGSSYLELQRDM-GADMIAVDWAVNLSQARTILGPDVPVSGNLDPTVLFGSKEQI 383
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGI---TPQVDPKNVLDLVK 339
V +D G G + NLGHG+ TP+ K ++D VK
Sbjct: 384 EQAVRDCIDQAGGPGRHLLNLGHGVMQGTPEEAVKWLVDEVK 425
>gi|42572441|ref|NP_974316.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|8777476|dbj|BAA97056.1| uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|22531275|gb|AAM97141.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|31711818|gb|AAP68265.1| At3g14930 [Arabidopsis thaliana]
gi|332642070|gb|AEE75591.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
Length = 341
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 168/323 (52%), Gaps = 7/323 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ Y+++ KK +F + + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
G E +GP + PI T+E + L+P ID L + S+ ILR+++ H ++
Sbjct: 61 FGVPFDIEEVKGPVIQSPIRTEEDMKRLHP-ID--FEKLQFVGDSLKILRREVGEHAAVL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAPWT+A+Y++ GG + + + + LL L+ EY++ Q+ G
Sbjct: 118 GFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLTKAITEYVVYQVEHGAH 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
IQIFD+ G L +E ++ + II AV+++ P+ + + G G +L+ + T
Sbjct: 178 CIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYINGNGGLLERMKG-TG 236
Query: 262 SNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
++ IGLDW+V ++ L E VQGN+DP L + + + ++ G I N
Sbjct: 237 ADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIERVVKCAGPKGHILN 296
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ + V +T R+
Sbjct: 297 LGHGVLVGTPEEAVAHFFETARN 319
>gi|145509701|ref|XP_001440789.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408017|emb|CAK73392.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 184/330 (55%), Gaps = 24/330 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR+I+ + +F C P E+TLQP ++++ DAAI+FSDILV+
Sbjct: 56 PVWMMRQAGRYLPEYREIKAEM-DFFATCQNPFIAAEITLQPTKQFDIDAAIIFSDILVL 114
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G + E +GP + +P+ T Q+++ NP +L ++ ++ + R L
Sbjct: 115 PKMMGMEITIEEKKGPVIANPLVTPDDIQKLHPPNPE------HLEHVYDALFLTRLALQ 168
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGFCGAPWTV +YM+ GG K + + + Y + +L+ L+ SA+YLI Q
Sbjct: 169 GKCNLIGFCGAPWTVFAYMVEGGSSKLFSKVKKWLYLYTEGSLQVLELLAKESAKYLINQ 228
Query: 196 I-HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG--YM 252
+ G V+QIFD+ AG + ++ + S+ + +++ P+ I F+K +
Sbjct: 229 VKQGGAQVVQIFDSWAGQIPALDYIEFIIPSLRILFEDFKKECPDTPLIMFSKDQNDKKV 288
Query: 253 LKNYRRLTDS-----NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG-V 305
+ + +LT + + LD +V ++ ++ +QGNL+P ++ GN V+I +
Sbjct: 289 IIEFLKLTYNDKPLVDGFQLDSNVSDETLIKIIEGNRTIQGNLEP-GVLFGNPVIIKKRI 347
Query: 306 NAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
+ +++ L + +I NL HG+TP + + V
Sbjct: 348 SQMIEKLQTTRRYIVNLAHGLTPDHEVEKV 377
>gi|219871004|ref|YP_002475379.1| uroporphyrinogen-III decarboxylase [Haemophilus parasuis SH0165]
gi|219691208|gb|ACL32431.1| uroporphyrinogen-III decarboxylase [Haemophilus parasuis SH0165]
Length = 308
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 160/303 (52%), Gaps = 14/303 (4%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ 104
+ +C + E+T+QP+RRY DAAILFSDIL I DA+G + F EGP+ PI +
Sbjct: 1 MSLCRNADLACEVTIQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIERK 60
Query: 105 EI--YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
+L P+ + L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K
Sbjct: 61 ADVDHLPIPDPEQELQY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKA 117
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
+ + Y + LLD L+D YL AQI AG + +FDT G L ++ ++
Sbjct: 118 FTKIKKMMYAEPALLHALLDKLADSVILYLNAQIKAGSQSVMVFDTWGGVLAHRDYNEFS 177
Query: 223 ARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LEL 279
R + +I+ + R+ K F KG G L+ T +A+GLDW+V ++ A +
Sbjct: 178 LRYMHKIVDGLIRENDGRKVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIADARRRV 236
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVL 335
+ +QGN+DP L + + V AIL G G +FNLGHGI P PK +
Sbjct: 237 GHKVALQGNMDPSVLYASPERIEQEVKAILAGFGQGSGHVFNLGHGIHQDVPIESPKVFV 296
Query: 336 DLV 338
D V
Sbjct: 297 DSV 299
>gi|303273526|ref|XP_003056124.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462208|gb|EEH59500.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 391
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 165/337 (48%), Gaps = 4/337 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G PP+WLMRQAGRY+ E+R+ K+ F T + +EL+LQP R +
Sbjct: 51 LLRVARGEQCERPPVWLMRQAGRYMAEFREYSDKY-GFRHRSETADIAIELSLQPWRAFK 109
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL ALG V+ +GP + P+ + +D L I +
Sbjct: 110 PDGVIMFSDILTPLPALGVEFDVVKGKGPLISSPVRSLHDVKSLRTLDDPDGSLPFIREI 169
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S LR ++ TL+GF G PWT+A+Y + G + + Q+ + L L+D
Sbjct: 170 LSSLRSEIAGETTLLGFIGTPWTLAAYSVEGRSDRHLINTKQMMTQDPSLLHMYLAHLAD 229
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
A Y QI G V+Q+FD+ A L +F ++ R+I+ V+ KYP+ I A
Sbjct: 230 ALAVYACHQIDCGAQVVQLFDSWAHHLSPLQFAEFSMPYSERVIAKVKAKYPDTPLIYHA 289
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G L+ + + ++ +GLDW+ + A L +QGN+DPM L + + + V
Sbjct: 290 NGGAGKLE-LMKGSSADVLGLDWNTSMKDARRILGSHRVIQGNIDPMYLFASEERIREEV 348
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G G I N+GHG+ ++V R
Sbjct: 349 SNNVADAGKGNHILNVGHGVIQGTPEQSVAVFCDAAR 385
>gi|309811715|ref|ZP_07705493.1| uroporphyrinogen decarboxylase [Dermacoccus sp. Ellin185]
gi|308434327|gb|EFP58181.1| uroporphyrinogen decarboxylase [Dermacoccus sp. Ellin185]
Length = 374
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 178/347 (51%), Gaps = 11/347 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ R ++ +G + P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQ
Sbjct: 30 DPRNSVLIMAARGEEVPYTPVWFMRQAGRSLPEYRKVREGV-GMLESCRRPDLVTEITLQ 88
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAI FSDI+V A G ++ V GP + P T+ P +L + +
Sbjct: 89 PVRRHDVDAAIFFSDIVVPLAAAGVDLDIVAGVGPVVAQPFRTRADLERLP--ELTPDMV 146
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +S+ ++ +L LIGF GAP+T+ASY+I GG K+H + Y + + +N L
Sbjct: 147 TDITESVQLITAEL-GGTPLIGFAGAPFTLASYLIEGGPSKNHENTKALMYGDPQLWNDL 205
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
L+ +S +L Q AG IQ+FD+ G L ++ + ++AV P
Sbjct: 206 CARLAQISGAFLRVQAAAGASAIQLFDSWVGNLPLDDYLRFVQPHSRTALAAV-DDLPGI 264
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F G G +L ++ +G+D+ V L A E + +QGNLDP L
Sbjct: 265 DVPKIHFGVGTGELLGAMGE-AGADVVGVDFRVSLDAARERTGNQYALQGNLDPALLFAP 323
Query: 298 NQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V+ I+ + IFNLGHG+ P DP V +V+ V S
Sbjct: 324 WEPLAARVDEIVAAGRRAKGHIFNLGHGVLPSTDPDVVTRVVERVHS 370
>gi|162456911|ref|YP_001619278.1| putative uroporphyrinogen decarboxylase [Sorangium cellulosum 'So
ce 56']
gi|189083024|sp|A9FZW7|DCUP_SORC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161167493|emb|CAN98798.1| putative Uroporphyrinogen decarboxylase [Sorangium cellulosum 'So
ce 56']
Length = 349
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 180/331 (54%), Gaps = 20/331 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY+ EYR++RKK+ L++C TPE +E+TLQP+R DAAILF+DIL+
Sbjct: 18 PVWFMRQAGRYMAEYRELRKKY-TLLEICKTPELALEVTLQPLR-LGMDAAILFADILLP 75
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+ +G F + EGP + D + + + P L Y+L ++ ++RK+L
Sbjct: 76 LEPMGAPFEFAKGEGPVIHEPVRDRAGIERLRVFEPEEGL--GYVL---DAVRLIRKELD 130
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAP+T+ASY++ GG D+ + + + A++ L+ +S+V L AQ
Sbjct: 131 GKTPLIGFAGAPFTMASYLVEGGKSSDYRLTKQLMWSDPEAWSALMGKISEVVRRLLRAQ 190
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AG +Q+FD+ G L ++ + V I+ + + I F G +L+
Sbjct: 191 VAAGAQAVQLFDSWVGSLSIDDYREHVQPHVRYILRDL--EATGVPVIHFGTNTGALLEA 248
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+R IG+DW PL A + + + VQGNLDP+ L V A+L+ G
Sbjct: 249 -QRDAGGTVIGVDWRTPLDKAWQRVGYDRAVQGNLDPLLLCAPRAVAERRARAVLEEAGG 307
Query: 315 -GPFIFNLGHGITPQ--VDP-KNVLDLVKTV 341
IFNLGHGI P+ VD K V+DLV ++
Sbjct: 308 RAGHIFNLGHGIIPETPVDTVKAVIDLVHSI 338
>gi|269839609|ref|YP_003324301.1| uroporphyrinogen decarboxylase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791339|gb|ACZ43479.1| uroporphyrinogen decarboxylase [Thermobaculum terrenum ATCC
BAA-798]
Length = 360
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 16/344 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++L + + P+W MRQAGR L EYR++R+K+ + L + TPE ++TL P+
Sbjct: 14 EARMLAACRRQPTDSTPVWFMRQAGRCLAEYRELRRKY-DILTLAKTPELCAQVTLMPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF----LNYL 120
DAA++F+DI++ +G F+E P + PI I +I+
Sbjct: 73 ALGVDAAVMFADIMLPLGGMGVEF-FIE---PEIGPIIPHPIRT-RADIEAIRIVEAEEA 127
Query: 121 LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
P +F++I I+R++L LIGF G+P+T+A YMI G +D+ + Y ++
Sbjct: 128 TPFVFEAIRIVRRELAGRAALIGFAGSPFTLACYMIEGRPSRDYAHAKRMMYGEPELWHG 187
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ +++V YL Q+ AG VIQ+FD+ G LG E+ Y RI S V K
Sbjct: 188 LMAKVTEVIVRYLRGQVQAGAQVIQLFDSWVGILGPDEYAEYVLPYSRRIFSEV--KALG 245
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG- 297
I F GA +L+ + + +DW V L A E + + +QGNLDP ++
Sbjct: 246 VPTIHFGTGAASLLELMAE-AGPDLVSVDWRVRLDEAWERIGHDRGIQGNLDPAAMLAPW 304
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V ++ + G +FNLGHG+ P DP + LV V
Sbjct: 305 HYVEKKALDILRRANGRPGHVFNLGHGVLPDTDPGKLRMLVDLV 348
>gi|239048271|ref|NP_001131512.2| hypothetical protein LOC100192850 [Zea mays]
gi|238908591|gb|ACF79949.2| unknown [Zea mays]
Length = 374
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 164/304 (53%), Gaps = 8/304 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R + D ILFSDIL
Sbjct: 59 PPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFAPDGVILFSDILT 118
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++GP + P+ ++E IDL + L + +S+ ILR ++
Sbjct: 119 PLPAIGVPFDISDSKGPVIQSPVRSKEQVRELVPIDL--DMLQFVGESLKILRNEIDGKA 176
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
L+GF GAPWT+A+Y++ GG + + + LL L+ ++Y+I Q+++
Sbjct: 177 ALLGFVGAPWTIATYIVEGGMTNTYTNIKSMCHTAPDVLKGLLSHLAQAISDYIIYQVNS 236
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
IQIFD+ G L H +E ++ + +I+S ++++ PN + + G G +L+ +
Sbjct: 237 RAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPNVPLVLYINGNGGLLERMKN 296
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
T + IGLDW+V ++ G VQGN+DP L V+ D ++ ++ + F
Sbjct: 297 -TGVDVIGLDWTVDMTDGRRRLGNGISVQGNVDPAFLFSPLPVLTDEIHRLVK---AQRF 352
Query: 318 IFNL 321
FNL
Sbjct: 353 PFNL 356
>gi|164658790|ref|XP_001730520.1| hypothetical protein MGL_2316 [Malassezia globosa CBS 7966]
gi|159104416|gb|EDP43306.1| hypothetical protein MGL_2316 [Malassezia globosa CBS 7966]
Length = 354
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 179/350 (51%), Gaps = 44/350 (12%)
Query: 34 EYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADALGRNVRFV 91
E+R+IR++F+ F + C PE E+T+QP+RRY+ DAA++FSDILV+ A+G V V
Sbjct: 3 EFRKIREQFE-FFECCRDPEVASEITVQPVRRYDRLLDAAVIFSDILVVPQAMGMEVEMV 61
Query: 92 ENEGPR-MDPITTQE--IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW 148
+GP + P+ + + L +I L Y+L +I + R KL + +IGFCGAPW
Sbjct: 62 PGKGPTFLHPLESPKDMARLKKVDIQKDLGYVL---DAIRLTRTKLAGRVPVIGFCGAPW 118
Query: 149 TVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT 208
T+ +YMI GG K + + + + LLD ++DV A +L+AQI AG ++Q+FD+
Sbjct: 119 TLMAYMIEGGGSKTWEKAKRWLFDYPEESKALLDRIADVCASFLVAQILAGAQLVQVFDS 178
Query: 209 HAGCLGEHEFENYAARSVGRIISAVR-----RKYPNAKFISFAKGA-GYMLKNYRRLTDS 262
AG L ++F +A + I V+ + I +A+GA + L R +
Sbjct: 179 WAGELTPYDFRTFALPYLRNIAVDVKDNLALKSVEPPPMIVYARGAVNHSLVEISR-SGY 237
Query: 263 NAIGLDWSVPLSFALEL--------------------QKEGPVQGNLDPMRLVVGNQVMI 302
+ +G+D +V ++A + Q +QGNLDP L +V+
Sbjct: 238 DVVGIDHTVEPAWARQCLAQAQSSNRKFSEVEVNKGAQHRIAIQGNLDPAILYARPEVIQ 297
Query: 303 DGVNAILDVL-----GSGPFIFNLGHGITPQVDPKNV---LDLVKTVRSE 344
D V + G G I NLG GITP VDP ++ L+ V V E
Sbjct: 298 DRVRRMFQTKTGGFGGQGALICNLGQGITPGVDPDHLRVFLEAVHRVSKE 347
>gi|145494596|ref|XP_001433292.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400409|emb|CAK65895.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 176/331 (53%), Gaps = 26/331 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEYR+I+ + +F C P E+TLQP ++++ DAAI+FSDILV+
Sbjct: 56 PVWMMRQAGRYLPEYREIKAEM-DFFATCQNPFIAAEITLQPTKQFDIDAAIIFSDILVL 114
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G + E +GP + +P+ T Q ++ NP +L ++ ++ + R L
Sbjct: 115 PKMMGMEITIEEKKGPVIANPLVTPDDIQRLHPPNPE------HLEHVYDALFLTRLALQ 168
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGFCGAPWTV +YMI GG K + + + Y + +L+ L+ SA+YLI Q
Sbjct: 169 GKCNLIGFCGAPWTVFAYMIEGGSSKLFSKVKKWLYLYTEGSLQVLELLAKESAKYLINQ 228
Query: 196 I-HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG---- 250
+ G V+QIFD+ AG + ++ + S+ + +++ P+ I F K
Sbjct: 229 VKQGGAQVVQIFDSWAGQIPAQDYIEFIIPSLRILFEDFKKECPDTPLIMFPKDQNDKKV 288
Query: 251 -----YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
++ N + L D LD +V ++ ++ +QGNL+P L ++
Sbjct: 289 IVEFLKLIYNDKPLVD--GFQLDSNVSDETLVKIIEANRTIQGNLEPGVLYGTPAIIKKR 346
Query: 305 VNAILDVLGSG-PFIFNLGHGITPQVDPKNV 334
++ +++ L + +I NL HG+TP + + V
Sbjct: 347 ISQMIEKLQTTRRYIVNLAHGLTPDHEVEKV 377
>gi|302812715|ref|XP_002988044.1| hypothetical protein SELMODRAFT_235444 [Selaginella moellendorffii]
gi|300144150|gb|EFJ10836.1| hypothetical protein SELMODRAFT_235444 [Selaginella moellendorffii]
Length = 338
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 172/324 (53%), Gaps = 9/324 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ K +F + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAAYRKLADKHPSFRKRSEETDLIVEISLQPWKAFMPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + +GP + DP+ + E +IDL + L + S+ LR+++ + ++G
Sbjct: 61 IGVEFEIDDAKGPIISDPVVSVERASQLHSIDL--SRLEFVGDSLRTLRREVGSGAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y+I G + + + + Y+N +LD L++ +YL+ QI +G
Sbjct: 119 FVGAPWTLATYLIEGRSTRTYKKIKGMCYENPELLKSILDHLANAIGDYLVFQIQSGAQC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFD+ G L +++ ++ + ++I V+ K P + +A G G +L+ R++D+
Sbjct: 179 VQIFDSWGGQLTPVQWDRWSKPYICKMIRTVKDKCPGVPIVLYANGNGGLLE---RMSDT 235
Query: 263 NA--IGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
A IGLDW+V L L VQGN+DP L + + V ++ G+ I
Sbjct: 236 GAHVIGLDWTVDMLDGRKRLGDSVAVQGNVDPCVLFGPEWSITEAVVDVVRKAGNKGHIL 295
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
NLGHG+ ++V +T RS
Sbjct: 296 NLGHGVLVGTPEESVAHFFQTARS 319
>gi|306817533|ref|ZP_07451276.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35239]
gi|304649575|gb|EFM46857.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/333 (32%), Positives = 170/333 (51%), Gaps = 19/333 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR R L C TP+ E+TLQP+RR++ DAA+ FSDI++
Sbjct: 31 PVWFMRQAGRSLPEYRAARAGV-GMLTACTTPDLVAEITLQPVRRHDVDAAVFFSDIVIP 89
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
G + V+ GP +D + + + + L ++ I + ++ R++L L
Sbjct: 90 LYLCGVGIDMVDGIGPVLDS-PVRSVADVERLVGLEVSDWSVIEDAAALGRRELAFEKVL 148
Query: 141 IGFCGAPWTVASYMISGGFI-------KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+GF GAP+T+ASY+I G + + R F +A+ L + + +S E+L
Sbjct: 149 LGFAGAPFTLASYLIESGQPGVSKAQRRACLRTREFMRCQPQAWAKLATWCARLSGEFLA 208
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
AQI G + +Q+FD+ G L E E+ YA + A + ++FA A ++L
Sbjct: 209 AQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK----GVNHVNFAVAASHLL 264
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLVVGNQVMI-DGVNAILDV 311
+ D ++G D S+ + A + G V QGNLDP L+ + I + +L
Sbjct: 265 EALGETADVVSVGTDISLKAAAA---RLPGKVLQGNLDPELLIQSDSEKIWSEADKVLQA 321
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ P IFNLGHG+ P+ DP + +LV V +
Sbjct: 322 GQAAPAHIFNLGHGVKPETDPGLLTELVARVHA 354
>gi|310641334|ref|YP_003946092.1| uroporphyrinogen decarboxylase [Paenibacillus polymyxa SC2]
gi|309246284|gb|ADO55851.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa SC2]
Length = 351
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 175/328 (53%), Gaps = 13/328 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY PEYR+I++K+ L++C PE E+TL P+R+ DAAIL+SDI+
Sbjct: 20 PVWYMRQAGRYDPEYRKIKEKY-TLLEICRQPELAAEVTLMPVRKLGVDAAILYSDIMNP 78
Query: 81 ADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+LG + V+N GP +D P+ T ++ L P ID+ + L I ++I IL ++L ++
Sbjct: 79 VASLGVDFDIVKNIGPVIDNPLRTAADVDNLRP-IDVERD-LGHILETIRILDREL--NV 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LI F GAP+T+ASY+I G K + + + Y ++ L+D L D+ Y+ A I
Sbjct: 135 PLITFAGAPFTIASYLIEGRPSKGYIRTKAMMYGEPELWHRLMDKLGDMVITYVRAHIAN 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G Q+FD+ G L ++F+ + ++ RI + N I F + L +
Sbjct: 195 GGKAFQLFDSWVGALSPYDFQTFVLPTIVRIFHELSDL--NVPKIYFPGVSSGELLPHLS 252
Query: 259 LTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLGSG 315
++ IGLDW V + L VQGNLDP L V+ I+D +L G
Sbjct: 253 GVKADVIGLDWRVSIPEGRRRLGNSFGVQGNLDPYVLTAPMNVIKQYAKKIVDEGILEPG 312
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+IFNLGHG+ P+ + +L V
Sbjct: 313 -YIFNLGHGLFPEASLDKLRELTDYVHE 339
>gi|322436926|ref|YP_004219138.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX9]
gi|321164653|gb|ADW70358.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX9]
Length = 393
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 175/369 (47%), Gaps = 55/369 (14%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W +RQAGRY+PEY +RK L++C TPE E+T+ R DAAI+F+D+L+
Sbjct: 26 PVWFLRQAGRYMPEYMAVRKH-HTLLEICRTPEIAAEVTITAAERLGVDAAIIFADLLLP 84
Query: 81 ADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP--- 135
+G + FV EGP ++ PI T +++ L + L Y + QSI + K
Sbjct: 85 FTPMGLDFEFVAGEGPVVNTPIRTYEQVQALRTDRSEDLIY---VSQSIEKVAKHFASPR 141
Query: 136 ---------NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN------------- 173
+ + +IGFCGAP+T+ASYMI GG +++ + + Y +
Sbjct: 142 PPEAGQTDGDQLGIIGFCGAPFTLASYMIEGGSSRNYIEAKKMMYASGATTESRHSERSS 201
Query: 174 -------------------SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG 214
S A+ L++ L V + Q+ AG DVIQ+FD+ AG L
Sbjct: 202 EPPYLHSSTEPQSPMETTGSAAWPLLMEKLVTVLTAFAAQQVEAGADVIQVFDSWAGALS 261
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
++ + +++ +R I F +L T ++ +GLDW +PL
Sbjct: 262 VEDYRQFCLAPTKQLVENIRNM--GVPAIYFGVDTASLLPTMTE-TGADVLGLDWRIPLD 318
Query: 275 FALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPK 332
+ + +QGNLDP+ L +V+ V IL + P IFNLGHGI P +
Sbjct: 319 EGWKSVGTAHAIQGNLDPIALFAPQEVLHARVKTILQQAANRPGHIFNLGHGIVPGTPVE 378
Query: 333 NVLDLVKTV 341
NV+ + + V
Sbjct: 379 NVIQVARWV 387
>gi|317121213|ref|YP_004101216.1| uroporphyrinogen decarboxylase [Thermaerobacter marianensis DSM
12885]
gi|315591193|gb|ADU50489.1| uroporphyrinogen decarboxylase [Thermaerobacter marianensis DSM
12885]
Length = 356
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 16/344 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
Q+ L + ++ P+W MRQAGR PE+R +R+++ F+++ P+ E+T+ P+
Sbjct: 4 SQRFLAACRRQPVDRTPVWFMRQAGRIFPEFRALRRQY-GFVELMQHPDLCAEITVMPVE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ----EIYLLNPNIDLFLNY 119
R DAAILF+DI+ LG + R GP + P+ + +P
Sbjct: 63 RLGVDAAILFADIMTPLQPLGVDYRIEPGVGPVVGQPLAAAADLGRLRRFDPR-----EE 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+ +++ ++R+ L + + LIGF GAP+T+A Y+I G ++ + R Y + ++
Sbjct: 118 LAPVLETVRLVRRALGDRVPLIGFAGAPFTLACYLIEGRPSREFHRARALMYGDPAFWHG 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L++ +YL AQ+ AGV +Q+FD+ G LG + + R++ +
Sbjct: 178 LMERLAETVLDYLRAQVEAGVQAVQLFDSWVGGLGPAAYRRFVLPYSRRVLEGLGDL--G 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG- 297
I F G +L + + +G+DW V L A E + + +QGNLDP L+
Sbjct: 236 VPRIHFGTGNAALLPLMAQ-AGAEVVGVDWRVDLDRAWEAIGPDKAIQGNLDPAALLAPF 294
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+QV + + G IFNLGHG+ P+ ++ LV+ V
Sbjct: 295 DQVEEQARDVLRRAAGRPGHIFNLGHGVLPETPVDHLRRLVELV 338
>gi|194695764|gb|ACF81966.1| unknown [Zea mays]
Length = 394
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 180/341 (52%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ ++G + PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQP + +
Sbjct: 56 LVSAIRGRKVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + V+ +GP + DP+ T +N + +P + Q
Sbjct: 116 PDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAA--VNEVREFVPEEWVPYVGQ 173
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ILR+++ N ++GF GAP+T+ASY + GG K+ + A+ + LL +
Sbjct: 174 ALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQKFT 233
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
A Y+ Q G +QIFD+ A L +FE ++ + +I+ +VR +PN I +
Sbjct: 234 TSMANYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPNLPLILY 293
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
A G+G +L+ LT + + LDW+V ++ + L VQGN+DP L + +
Sbjct: 294 ASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNTAVQGNVDPGVLFGSKEFISRR 352
Query: 305 VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + G+ + NLGHGI TP+ + + ++ K +R
Sbjct: 353 IYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 393
>gi|313835647|gb|EFS73361.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA2]
gi|314928319|gb|EFS92150.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL044PA1]
gi|314970248|gb|EFT14346.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA3]
Length = 353
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 24/352 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L+ + G+ P+W MRQAGR LPEYR+ RK LD C PE E+T QP+RR
Sbjct: 11 SSLLQAMTGHRPAVTPVWFMRQAGRSLPEYREARKG-TTMLDSCLNPELAAEITCQPVRR 69
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY----L 120
++ D A+L+SDI+V G VR GP +D P+ T ++D
Sbjct: 70 HHVDGAVLYSDIMVPLALAGTGVRIEPGVGPVLDEPVRTAS------DVDRITQRNAGDS 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I ++ ++ +L + LIGF GAP+T+++Y++ G +DH R + + +A+ L
Sbjct: 124 SVIEEAARLVVAELGDTTPLIGFAGAPFTISAYLVEGSPSRDHLSARAMMHSDPQAWARL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+++++D+ A +L AQ+ G IQ+FD+ AG L ++ A R ++ V P
Sbjct: 184 MEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLSATDYRASVAPFSQRALANVDLNTP-- 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDPM 292
+ F A ++L + ++ + + +G+D + L A + E PVQGN+DP
Sbjct: 242 -VVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSEMEMPVQGNIDPA 300
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 301 LLFAGWEPLETATREIVTAGRQAPGHVVNLGHGVPSSTDPDVLTRLVELVHS 352
>gi|48478485|ref|YP_024191.1| uroporphyrinogen decarboxylase [Picrophilus torridus DSM 9790]
gi|74572041|sp|Q6KZ54|DCUP_PICTO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|48431133|gb|AAT43998.1| uroporphyrinogen decarboxylase [Picrophilus torridus DSM 9790]
Length = 331
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 170/328 (51%), Gaps = 21/328 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYL EY + +K ++C PE ++ P+R N DAAI+FSDI +
Sbjct: 17 PVWFMRQAGRYLKEYNE-KKGRMTIKEICMDPELIAGISYDPVRILNVDAAIIFSDITIP 75
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL-----NYLLPIFQSISILRKKLP 135
+ALG + F+ GPR+ Y+ N ++ + N+ I+ +I I ++K
Sbjct: 76 LEALGYKIEFLPG-GPRI-----INGYIKNHDMKDIIYFEESNFKYKIYDAIKIFKEKY- 128
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
H LIGF G TV SY+I+GG + + + + FN ++ + D+ +Y+ Q
Sbjct: 129 -HFPLIGFSGGLITVLSYIIAGGPDSNLNLTKRSMLSDDK-FNDYINIIKDMIIKYIRLQ 186
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+ AGVD IQIFD+ G L +ENY + I+S + N I F+ G +++
Sbjct: 187 VRAGVDAIQIFDSWLGYLSPQTYENYIKGHIEEILSEI-----NVPVIYFSTGTSSIIEK 241
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
RL + + I +DW + + A + + +QGNLDP+ + + + I++ G
Sbjct: 242 LSRL-NVDYISVDWRLDMKLARSMVNKKGLQGNLDPLIAAYNLRYALKETSDIINAAGRS 300
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+IFNLGHG+ P+ +N+ +V V +
Sbjct: 301 SYIFNLGHGVIPETPVENLKHIVNFVHN 328
>gi|328908099|gb|EGG27858.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium sp. P08]
Length = 401
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 24/352 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L+ + G+ P+W MRQAGR LPEYR+ RK LD C PE E+T QP+RR
Sbjct: 59 SSLLQAMTGHRPAVTPVWFMRQAGRSLPEYREARKG-TTMLDSCLNPELAAEITCQPVRR 117
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP-- 122
++ D A+L+SDI+V G VR GP +D P+ T ++D
Sbjct: 118 HHVDGAVLYSDIMVPLALAGTGVRIEPGVGPVLDEPVRTAS------DVDRITQRNAGDS 171
Query: 123 --IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I ++ ++ +L + LIGF GAP+T+++Y++ G +DH R + + +A+ L
Sbjct: 172 SVIEEAARLVVAELGDTTPLIGFAGAPFTISAYLVEGSPSRDHLSARAMMHSDPQAWARL 231
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+++++D+ A +L AQ+ G IQ+FD+ AG L ++ A R ++ V P
Sbjct: 232 MEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLSATDYRASVAPFSQRALANVDLNTP-- 289
Query: 241 KFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDPM 292
+ F A ++L + ++ + + +G+D + L A + E PVQGN+DP
Sbjct: 290 -VVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSEMEMPVQGNIDPA 348
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 349 LLFAGWEPLETATREIVTAGRQAPGHVVNLGHGVPSSTDPDVLTRLVELVHS 400
>gi|56417276|ref|YP_154350.1| uroporphyrinogen decarboxylase [Anaplasma marginale str. St.
Maries]
gi|56388508|gb|AAV87095.1| uroporphyrinogen decarboxylase [Anaplasma marginale str. St.
Maries]
Length = 265
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 13/270 (4%)
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+V+ DALG V F+ +GP++ I Q Y +I L P+F+ I +RK L +
Sbjct: 1 MVVLDALGYEVSFIRGQGPKIGNIIHQ--YSTTESI----AKLQPVFEGIRKVRKSLDSD 54
Query: 138 ITLIGFCGAPWTVASYMI--SGGFIK---DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
TLIGF G+PWT+ +Y++ F+K D V + ++ L++ ++D+++ YL
Sbjct: 55 KTLIGFAGSPWTLLTYVLGKENNFLKIRKDICLETVHKHTKNKVTE-LVNRITDLTSHYL 113
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
QI +GVDVIQ+FD+ A L FE Y +I+ VR ++PN I F GAG M
Sbjct: 114 AKQIESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFVRVRHPNFPIIGFPMGAGVM 173
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
K Y T +AI +D+S+P S+ E +G +QGNLDP L + I++ L
Sbjct: 174 YKTYLEKTGISAISVDYSIPTSWIKE-HLDGVIQGNLDPSLLAYNQKASDSQSMKIVEEL 232
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G P IFNLGHGI P+ ++V L+++VR
Sbjct: 233 GDKPLIFNLGHGILPETPIQHVESLIRSVR 262
>gi|152965551|ref|YP_001361335.1| uroporphyrinogen decarboxylase [Kineococcus radiotolerans SRS30216]
gi|151360068|gb|ABS03071.1| uroporphyrinogen decarboxylase [Kineococcus radiotolerans SRS30216]
Length = 354
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 171/335 (51%), Gaps = 17/335 (5%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR+ R L+ C PE E+TLQP+RRY+ DAA+ +SDI+V
Sbjct: 22 PVWFMRQAGRSLPEYREARAG-TTMLESCRIPELVAEITLQPVRRYDVDAAVFYSDIVVP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP---N 136
+A G V V GP + +P T+ L+ +L L+ L + ++++ +L +
Sbjct: 81 LEAAGVGVEIVAGTGPVIAEPFRTRAD--LDRLPELSLDALQHVTDAVALTTAQLAGIGD 138
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LIGF GAP+T+ASY++ GG +D + + + + + ++ L L+ ++ +L AQ+
Sbjct: 139 GVPLIGFAGAPFTLASYLVEGGPSRDLLRTKALMHADPQLWHDLAARLAQIAGTFLRAQV 198
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AG +Q+FD+ G L ++E A ++AV F G G +L
Sbjct: 199 LAGASAVQLFDSWVGALPLADYERLVAPHSSAALAAVSDL--GVPRTHFGTGTGELLGAM 256
Query: 257 RRLTDS-NAIGLDWSVPLSFALELQKEG-----PVQGNLDPMRLVVGNQVMIDGVNAIL- 309
+ + +G+D+ VPL G VQGNLDP L V+ ++ IL
Sbjct: 257 AAVDGGVDVLGVDFRVPLDVGAARGAAGAGRPVAVQGNLDPALLFAPWDVLRADLHRILA 316
Query: 310 -DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + NLGHG+ P DP + +V+ V +
Sbjct: 317 EGERAGGGHVVNLGHGVPPTADPAVLARVVEEVHA 351
>gi|147844103|emb|CAN82689.1| hypothetical protein VITISV_026490 [Vitis vinifera]
Length = 412
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 168/321 (52%), Gaps = 6/321 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP ++
Sbjct: 58 LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQPWEAFH 117
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G E GP + PI ++ + +L+P IDL L + +
Sbjct: 118 PDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEAGLKVLHP-IDL--KKLHFVGE 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL L+
Sbjct: 175 SLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLSHLT 234
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P + +
Sbjct: 235 QAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPIVLY 294
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + L+W+V ++ + G +QGN+DP L + +
Sbjct: 295 INGNGGLLERMKGTGVECDWNLNWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPALTNE 354
Query: 305 VNAILDVLGSGPFIFNLGHGI 325
+ ++ G I NLGHG+
Sbjct: 355 IQRVVRCAGPRGHILNLGHGV 375
>gi|224145917|ref|XP_002325811.1| predicted protein [Populus trichocarpa]
gi|222862686|gb|EEF00193.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 189/357 (52%), Gaps = 31/357 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGR----------YLPEYRQIRKKFKNFLDMCYTPEYTVE 57
+L ++G + PP+WLMRQAGR + Y+ I +K +F + + VE
Sbjct: 55 LLNAVRGEDVERPPVWLMRQAGRNWFTSYAHVSFKMSYQIICEKHPSFRERSENVDLVVE 114
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF 116
++LQP + + D ILFSDIL + V+ +GP + +P+ T + ++D
Sbjct: 115 ISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFNPLRTAD------DVDQV 168
Query: 117 LNYL----LP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
++ +P + +++++LRK++ N ++GF GAP+T+ASY++ GG K + + A+
Sbjct: 169 REFVPEESVPYVGEALTVLRKEVENKAAVLGFVGAPFTLASYVVEGGSSKHFTKIKRLAF 228
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
+ + LL + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+
Sbjct: 229 SQPKVLHALLQKFATSMAKYIQYQADSGAQTVQIFDSWATELSPVDFEEFSLPYLKQIVD 288
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGN 288
V++ +PN I +A G+G +L+ LT + + LDWSV + A ++ GP VQGN
Sbjct: 289 TVKQSHPNLPLILYASGSGGLLERL-ALTGVDVVSLDWSVDM--AEGRKRLGPDVAVQGN 345
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+DP L + + + + ++ G G I NLGHGI TP+ + + ++ K +R
Sbjct: 346 VDPGVLFGSKEFITNRIYDVVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIR 402
>gi|154297638|ref|XP_001549245.1| hypothetical protein BC1G_12664 [Botryotinia fuckeliana B05.10]
gi|150858487|gb|EDN33679.1| hypothetical protein BC1G_12664 [Botryotinia fuckeliana B05.10]
Length = 327
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 140/247 (56%), Gaps = 18/247 (7%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILF 74
+ PP+W+MRQAGRYLPEY + + K +F + C +PE LTLQPI R+ DAAI+F
Sbjct: 84 VERPPMWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPIERFAGLVDAAIIF 142
Query: 75 SDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNIDLF--LNYLLPIFQSI 127
SDILVI A+G V V+ +GP +P+ + E +LN +D+ L+Y ++++I
Sbjct: 143 SDILVIPQAMGMTVEMVDKKGPHFPEPLESPEDGQYERVLNKKVDVAAELDY---VYKAI 199
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++ R KL + L GFCGAPWT+ YM+ GG K + + + Y+ A LL +++V
Sbjct: 200 TLTRHKLKGRVPLFGFCGAPWTLLCYMVEGGGSKLFVKTKTWVYRYPEASKALLQKIAEV 259
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----NAKF 242
EYL Q+ AG ++Q+FD+ A L F+ ++ + I + ++
Sbjct: 260 CVEYLALQVKAGAQLVQVFDSWAAELSPSSFKEFSRPYLAYISENLPKRLKELGLEQVPM 319
Query: 243 ISFAKGA 249
+ FAKGA
Sbjct: 320 VVFAKGA 326
>gi|289424561|ref|ZP_06426344.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK187]
gi|289155258|gb|EFD03940.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK187]
gi|327334884|gb|EGE76595.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL097PA1]
Length = 354
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 14 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 73 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 127 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 184 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 241 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 300
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 301 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|315106335|gb|EFT78311.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL030PA1]
Length = 353
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|50841794|ref|YP_055021.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium acnes
KPA171202]
gi|50839396|gb|AAT82063.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium acnes
KPA171202]
Length = 426
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 86 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 144
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 145 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 198
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 199 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 255
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 256 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 312
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 313 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 372
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 373 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 425
>gi|298345855|ref|YP_003718542.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 43063]
gi|298235916|gb|ADI67048.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 43063]
Length = 343
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 31/341 (9%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 1 MRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRRHHVDAAVFFSDIVVPLYLA 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G ++ V + GP + P+T+ + + +L + I Q+ + +R++LP L+GF
Sbjct: 60 GADINIVPDRGPVLRQPLTS--VAEVEKLTELEVTDWSVIEQAAAHVRRELPYEKVLLGF 117
Query: 144 CGAPWTVASYMISGGFIKDHG--QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GAP+T+ASY++ G + + R F A+N L + + +S +++ AQI+ G +
Sbjct: 118 AGAPFTLASYLLEAGGPRRRECLETRAFVEAEPAAWNKLATWCAKLSGQFMKAQINGGAE 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L E+ +A S + P A I F G ++++ + +
Sbjct: 178 AVQLFDSWAGSLTASEYRQFAL----PYSSLAFQGAPGATHIHFGVGTAHLIEAMGEIAE 233
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG-------------------NQVMI 302
+IG D + L A +QGNLDP LV Q+
Sbjct: 234 VVSIGSD--LGLDAAARRLPGKVLQGNLDPDLLVTAEQPAQTDSTPTDAKPTDHMEQIWR 291
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + L + IFNLGHG+ P+ DP + +L + +
Sbjct: 292 EAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 332
>gi|295129871|ref|YP_003580534.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK137]
gi|291375822|gb|ADD99676.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK137]
Length = 354
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 14 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 73 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 127 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 184 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D L A E PVQGN+DP
Sbjct: 241 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQGNIDP 300
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 301 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|313765240|gb|EFS36604.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL013PA1]
gi|313772846|gb|EFS38812.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL074PA1]
gi|313802781|gb|EFS43999.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA2]
gi|313810985|gb|EFS48699.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL083PA1]
gi|313815288|gb|EFS53002.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL059PA1]
gi|313828703|gb|EFS66417.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL063PA2]
gi|313831751|gb|EFS69465.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL007PA1]
gi|313834368|gb|EFS72082.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL056PA1]
gi|313840065|gb|EFS77779.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL086PA1]
gi|314916107|gb|EFS79938.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA4]
gi|314917028|gb|EFS80859.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA1]
gi|314921304|gb|EFS85135.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA3]
gi|314931034|gb|EFS94865.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL067PA1]
gi|314955014|gb|EFS99420.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL027PA1]
gi|314959053|gb|EFT03155.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA1]
gi|314964543|gb|EFT08643.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL082PA1]
gi|314969643|gb|EFT13741.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA1]
gi|314974709|gb|EFT18804.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL053PA1]
gi|314977095|gb|EFT21190.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL045PA1]
gi|314985505|gb|EFT29597.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA1]
gi|315078441|gb|EFT50472.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL053PA2]
gi|315082094|gb|EFT54070.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL078PA1]
gi|315097340|gb|EFT69316.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL038PA1]
gi|315099445|gb|EFT71421.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL059PA2]
gi|315102050|gb|EFT74026.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL046PA1]
gi|315110124|gb|EFT82100.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL030PA2]
gi|327331374|gb|EGE73113.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL096PA2]
gi|327447244|gb|EGE93898.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL043PA1]
gi|327449723|gb|EGE96377.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL043PA2]
gi|327454573|gb|EGF01228.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA3]
gi|327456645|gb|EGF03300.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL083PA2]
gi|328755628|gb|EGF69244.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA1]
gi|328756708|gb|EGF70324.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL025PA2]
gi|328761897|gb|EGF75407.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL099PA1]
Length = 353
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|289428892|ref|ZP_06430572.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J165]
gi|289157893|gb|EFD06116.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J165]
Length = 354
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 14 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 72
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 73 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 127 ---IEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V PN
Sbjct: 184 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD---PN 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 241 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 300
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 301 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|313806436|gb|EFS44943.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA2]
gi|313826522|gb|EFS64236.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL063PA1]
gi|314980330|gb|EFT24424.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL072PA2]
gi|315087706|gb|EFT59682.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL072PA1]
gi|327333361|gb|EGE75081.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL096PA3]
Length = 353
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-------IYLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|242041001|ref|XP_002467895.1| hypothetical protein SORBIDRAFT_01g036030 [Sorghum bicolor]
gi|241921749|gb|EER94893.1| hypothetical protein SORBIDRAFT_01g036030 [Sorghum bicolor]
Length = 394
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 181/341 (53%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ ++G ++ PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQP + +
Sbjct: 56 LVSAIRGRKVDRPPVWLMRQAGRYMKSYQSLCERYPSFRERSENVDLVVEISLQPWKVFK 115
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + V+ +GP + DP+ T +N + +P + Q
Sbjct: 116 PDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAA--VNEVREFVPEEWVPYVGQ 173
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++++LR+++ N ++GF GAP+T+ASY + GG K+ + A+ + LL +
Sbjct: 174 ALNLLREEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTMIKKMAFSEPAILHNLLQKFT 233
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +PN I +
Sbjct: 234 TSMSNYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVKETHPNLPLILY 293
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
A G+G +L+ LT + + LDW+V ++ + L VQGN+DP L + +
Sbjct: 294 ASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISKR 352
Query: 305 VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + G+ + NLGHGI TP+ + + ++ K +R
Sbjct: 353 IYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 393
>gi|326490007|dbj|BAJ94077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 179/341 (52%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ ++G + PP+WLMRQAGRY+ Y+ + +K+ F + + VE++LQP + +
Sbjct: 57 LVSAIKGKKVERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFK 116
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + V+ +GP + DP+ T +N + +P + Q
Sbjct: 117 PDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAA--VNEVREFVPEEWVPYVGQ 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++++LR ++ N ++GF GAP+T+ASY + GG K+ + + A+ + LL +
Sbjct: 175 ALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFT 234
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
A Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +P+ I +
Sbjct: 235 TSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILY 294
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
A G+G +L+ LT + + LDW+V ++ + L VQGN+DP L + +
Sbjct: 295 ASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITKR 353
Query: 305 VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + GS + NLGHGI TP+ + + ++ K +R
Sbjct: 354 IYDTVQKAGSQGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 394
>gi|313817303|gb|EFS55017.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL046PA2]
gi|313821949|gb|EFS59663.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA1]
gi|313824155|gb|EFS61869.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA2]
gi|314926609|gb|EFS90440.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA3]
gi|314961326|gb|EFT05427.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA2]
gi|314987329|gb|EFT31420.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA2]
gi|314989128|gb|EFT33219.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA3]
gi|315082763|gb|EFT54739.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL027PA2]
gi|315086122|gb|EFT58098.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA3]
gi|328758362|gb|EGF71978.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL020PA1]
Length = 353
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-------IYLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|332674711|gb|AEE71527.1| uroporphyrinogen decarboxylase [Propionibacterium acnes 266]
Length = 366
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 26 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 84
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-------IYLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 85 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 138
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 139 ---IEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 195
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V PN
Sbjct: 196 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD---PN 252
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 253 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 312
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 313 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 365
>gi|327445622|gb|EGE92276.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL013PA2]
Length = 353
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 176/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-------IYLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSAGNYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D + L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|219558683|ref|ZP_03537759.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 282
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 131/215 (60%), Gaps = 7/215 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V
Sbjct: 34 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVP 92
Query: 81 ADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L +
Sbjct: 93 LRAAGVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDV 148
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI A
Sbjct: 149 PLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDA 208
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
GVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 209 GVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAAL 243
>gi|313793131|gb|EFS41198.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA1]
gi|327457078|gb|EGF03733.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL092PA1]
Length = 353
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 30/353 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE E+T QP+RR++
Sbjct: 13 LLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREG-TTMLESCLNPELAAEITCQPVRRHH 71
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEI-------YLLNPNIDLFLNY 119
D A+L+SDI+V G VR GP +D P+ T ++ +P++
Sbjct: 72 VDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASDVDRITRRHVEDPSV------ 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + + + +
Sbjct: 126 ---IEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDPQTWAR 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V PN
Sbjct: 183 LMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD---PN 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALEL----QKEGPVQGNLDP 291
+ F A ++L + ++ + + +G+D L A E PVQGN+DP
Sbjct: 240 IPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQGNIDP 299
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + I+ P + NLGHG+ DP + L + V S
Sbjct: 300 ALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLAELVHS 352
>gi|229822487|ref|YP_002884013.1| uroporphyrinogen decarboxylase [Beutenbergia cavernae DSM 12333]
gi|229568400|gb|ACQ82251.1| uroporphyrinogen decarboxylase [Beutenbergia cavernae DSM 12333]
Length = 370
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 17/348 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L G + P +W MRQAGR LPEYR R L+ C TPE E+TLQP+RR
Sbjct: 29 SPLLAAYHGRPVGPA-VWFMRQAGRSLPEYRAARAG-TEMLEACLTPELAAEITLQPVRR 86
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAI FSDI+V G +V GP + +P+ I
Sbjct: 87 HGVDAAIFFSDIVVPLALAGVDVHIEPGLGPVIAEPVRDATAARAL--AARAPGDAARIT 144
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L LIGF GAP+T+A+Y++ G +DH R + + A++ LL ++
Sbjct: 145 EAVRLTVAEL-GATPLIGFAGAPFTLAAYLVEGRPSRDHLAARTMMHADPEAWDALLGWV 203
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+++S +L AQ+ AG +Q+FD+ AG LG ++ + R R + AV +
Sbjct: 204 AEISGAFLRAQVMAGASAVQLFDSWAGSLGRADYAAHVQRYSARTLDAVADL--GVPMVH 261
Query: 245 FAKGAGYMLKNYRRL-------TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F G +L R T +G+D + L A L P+QGN+DP L
Sbjct: 262 FGTGTSDLLDLLRDAIPAGSPGTGPAVVGVDHRIGLDEANARLGGATPLQGNIDPAFLAA 321
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V ++ + P + NLGHG+ P DP + +V+ V
Sbjct: 322 PWPVLEAHVRDVVARGTAAPGHVVNLGHGVPPDTDPGVLTRVVELVHG 369
>gi|302834822|ref|XP_002948973.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300265718|gb|EFJ49908.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 390
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 177/346 (51%), Gaps = 20/346 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G + PP+W+MRQAGRY Y+ + KK F + + VE++LQP +
Sbjct: 50 MLRALRGEKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWHAFK 109
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL G N+ F GP MDPI T + + L + P + +
Sbjct: 110 PDGVILFSDILTPLP--GMNIPFDMAPGPIIMDPIRT--MAQVEKVTKLDADAACPFVGE 165
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ LR + N TL+GF GAP+T+A+Y++ GG K+ + A+ + LLD L+
Sbjct: 166 SLRQLRSYIGNQATLLGFVGAPFTLATYIVEGGSSKNFAHIKKMAFSTPEVLHALLDKLA 225
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A+Y+ Q AG V+QIFD+ A L +F+ ++ + ++I +VR+ +PN I +
Sbjct: 226 DNVADYVRYQADAGAQVVQIFDSWASELQPQDFDVFSGPYIKKVIDSVRKTHPNLPIILY 285
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMI 302
G+G +L+ + I LD SV F +++ G QGN+DP ++ G++ I
Sbjct: 286 ISGSGGLLERM-AAAQPDIISLDQSV--DFTDGVKRCGANFAFQGNMDP-GVLFGSKDFI 341
Query: 303 DGVNAILDVLGSG-----PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++D + + I NLGHG+ P +V R+
Sbjct: 342 E--TRVMDTIKAARSAGVRHIMNLGHGVLPGTPEDHVGHFFHVART 385
>gi|115452897|ref|NP_001050049.1| Os03g0337600 [Oryza sativa Japonica Group]
gi|122247045|sp|Q10LR9|DCUP2_ORYSJ RecName: Full=Uroporphyrinogen decarboxylase 2, chloroplastic;
Short=UPD2; Short=URO-D2; Flags: Precursor
gi|108708034|gb|ABF95829.1| Uroporphyrinogen decarboxylase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113548520|dbj|BAF11963.1| Os03g0337600 [Oryza sativa Japonica Group]
gi|222624887|gb|EEE59019.1| hypothetical protein OsJ_10762 [Oryza sativa Japonica Group]
Length = 390
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 179/341 (52%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ ++G + PP+WLMRQAGRY+ Y+ + ++ +F + + VE++LQP + +
Sbjct: 52 LVSAIKGRKVERPPVWLMRQAGRYMKSYQLLCERHPSFRERSENVDLVVEISLQPWKVFK 111
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + V+ +GP + DP+ T +N + +P + Q
Sbjct: 112 PDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAAA--VNEVREFVPEEWVPYVGQ 169
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ILR+++ N ++GF GAP+T+ASY + GG K+ + + A+ + LL +
Sbjct: 170 ALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEPEILHNLLQKFT 229
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
A Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +P I +
Sbjct: 230 TSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPELPLILY 289
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
A G+G +L+ LT + + LDW+V ++ + L VQGN+DP L + +
Sbjct: 290 ASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISKR 348
Query: 305 VNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + G+ + NLGHGI TP+ + + ++ K +R
Sbjct: 349 IFDTVQKAGNSGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 389
>gi|162458615|ref|NP_001105610.1| uroporphyrinogen decarboxylase, chloroplastic precursor [Zea mays]
gi|6014938|sp|O81220|DCUP_MAIZE RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
Short=UPD; Short=URO-D; Flags: Precursor
gi|3420233|gb|AAC31883.1| uroporphyrinogen decarboxylase [Zea mays]
Length = 393
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 176/336 (52%), Gaps = 9/336 (2%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAI 72
Q + PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQP + + D I
Sbjct: 60 QREEVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVI 119
Query: 73 LFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQSISIL 130
LFSDIL + V+ +GP + DP+ T +N + +P + Q+++IL
Sbjct: 120 LFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAA--VNEVREFVPEEWVPYVGQALNIL 177
Query: 131 RKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE 190
R+++ N ++GF GAP+T+ASY + GG K+ + A+ + LL + A
Sbjct: 178 RQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQKFTTSMAN 237
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
Y+ Q G +QIFD+ A L +FE ++ + +I+ +VR +P+ I +A G+G
Sbjct: 238 YIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPDLPLILYASGSG 297
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
+L+ LT + + LDW+V ++ + L VQGN+DP L + + + +
Sbjct: 298 GLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNTAVQGNVDPGVLFGSKEFITRRIYDTV 356
Query: 310 DVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
G+ + NLGHGI TP+ + + ++ K +R
Sbjct: 357 QKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 392
>gi|257076917|ref|ZP_05571278.1| uroporphyrinogen decarboxylase [Ferroplasma acidarmanus fer1]
Length = 335
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 26/333 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY+ EY+++RK + N MC PE T ++T P++ DAAI+F+DI++
Sbjct: 17 PVWFMRQAGRYMDEYKELRKLY-NIRQMCMDPEITEKITYAPVKLLGVDAAIIFADIILP 75
Query: 81 ADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+A+G + F + GP + + + I+ N + Y +I + ++ P
Sbjct: 76 LEAMGYKIDF-NSSGPDIGNGYRHNKSMEGIHEFNTGDLKYRTY-----DAIRLFKQNHP 129
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ---NSRAFNWLLDFLSDVSAEYL 192
LIGF G TV SY+I+G + D+ N V+ + N +F + + ++ +Y+
Sbjct: 130 -ETPLIGFSGGIITVMSYIIAG--VSDN--NLVYTKKVMLNDPSFGIMKKMIKNMILDYV 184
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
Q+ AGVD IQIFD+ G L + FE Y + ++ +++ K P I F+ G+ M
Sbjct: 185 TMQVKAGVDAIQIFDSWLGALSPYTFEKYLKNDIIELVESIKSKVP---VIYFSTGSSGM 241
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
++ + + + + +DW + LS A L +QGNLDP + + ++ IL
Sbjct: 242 IEQFNDIK-PDILSVDWRIKLSHARTILNGSIGMQGNLDPYLVQYSREAALEETGRILGE 300
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +IFNLGHG+ P+ DP + + TV S
Sbjct: 301 AGKDDNYIFNLGHGVLPETDPDTLKSITDTVHS 333
>gi|2501646|sp|Q42855|DCUP_HORVU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|1016347|emb|CAA58039.1| uroporphyrinogen decarboxylase [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 173/329 (52%), Gaps = 9/329 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+WLMRQAGRY+ Y+ + +K+ F + + VE++LQP + + D ILFSDIL
Sbjct: 4 PPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFKPDGVILFSDILT 63
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQSISILRKKLPNH 137
+ V+ +GP + DP+ T +N + +P + Q++++LR ++ N
Sbjct: 64 PLPGMNIPFDIVKGKGPVIYDPLRTAAA--VNEVREFVPEEWVPYVGQALNLLRGEVKNE 121
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
++GF GAP+T+ASY + GG K+ + + A+ + LL + A Y+ Q
Sbjct: 122 AAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFTTSMANYIKYQAD 181
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
G +QIFD+ A L +FE ++ + +I+ +V+ +P+ I +A G+G +L+
Sbjct: 182 NGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILYASGSGGLLERL- 240
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
LT + + LDW+V ++ + L VQGN+DP L + + + + GS
Sbjct: 241 PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITKRIYDTVQKAGSQG 300
Query: 317 FIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ NLGHGI TP+ + + ++ K +R
Sbjct: 301 HVLNLGHGIKVGTPEENVAHFFEVAKGIR 329
>gi|322711595|gb|EFZ03168.1| uroporphyrinogen decarboxylase [Metarhizium anisopliae ARSEF 23]
Length = 376
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 48/350 (13%)
Query: 28 AGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADALG 85
AGRYLPEY + + ++F + C PE LTLQP+ R+ DAAI+FSDILVI A+G
Sbjct: 19 AGRYLPEYHEAKGN-RDFFECCRDPEIASTLTLQPVERFAGLLDAAIIFSDILVIPQAMG 77
Query: 86 RNVRFVENEGPRM-DPITT----QEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHI 138
V V+ +GP +P+ T Q +LN ++ + L+Y ++++I++ RKK+ +
Sbjct: 78 MEVEMVDKKGPHFPNPLKTPKDGQYDQVLNRDVQVAKELDY---VYKAITLTRKKIAGRV 134
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGFCGAPWT+ YM+ GG K ++ + Y+ LL ++D+ ++L Q+ A
Sbjct: 135 PLIGFCGAPWTLFCYMVEGGGTKLFAHSKTWIYKYPEESKRLLSKIADICVDHLARQVEA 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYML 253
G ++ +FD+ AG L F ++ + I + K + F KGA Y L
Sbjct: 195 GAQMVMVFDSWAGELSPSSFREFSEPYLSHIAQKLPSKLKSLGLDRVPMTVFPKGAWYAL 254
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLDPMRLVVGNQVMIDGVNAILD- 310
+ L N +G+DW AL ++ V QGN DP L + + V ++
Sbjct: 255 DSVCNL-GYNVVGMDWLQDPVAALRIRGSRNVVFQGNADPGVLYGTKEAITLAVEQMVKG 313
Query: 311 -VLGSGPFIFNLGH-------------------------GITPQVDPKNV 334
+ +I NLGH GITP VDP N+
Sbjct: 314 FWVDKKGWIANLGHGMAQAETNNLCWPSDLRIANHIPCTGITPGVDPDNL 363
>gi|16081446|ref|NP_393790.1| uroporphyrinogen decarboxylase [Thermoplasma acidophilum DSM 1728]
gi|13878468|sp|Q9HLB9|DCUP_THEAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|10639453|emb|CAC11455.1| uroporphyrinogen decarboxylase related protein [Thermoplasma
acidophilum]
Length = 333
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 23/330 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLP Y + R++ +M +P+ V++T P+ R DAAI+F+DI
Sbjct: 17 PVWFMRQAGRYLPSYMKYRQRM-GIEEMMSSPDVIVDVTHDPVDRIGVDAAIIFADITTP 75
Query: 81 ADALGRNVRFVENEGP----RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN 136
+G VRF+++ GP ++ + +P+ ++ P+ ++IS R++ +
Sbjct: 76 LSGMGLRVRFLDSVGPVVENNIEKSGISAVEEFDPS-----SFSHPVLKAISKYRERYAD 130
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
LIGF G P T+ SY+IS G +D + + +A+ ++ L+D+ E+ QI
Sbjct: 131 --PLIGFAGGPVTLLSYIISDGVDRDLFRVKRMMITEEKAYQAVMTRLTDMIIEFARMQI 188
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AGVD QIFD+ AG L E+E++ V I+ + P F + M +Y
Sbjct: 189 SAGVDAFQIFDSWAGYLSPGEYEHFVKPYVYDILQELSGSIPTIYFST-------MTSSY 241
Query: 257 RRLTD--SNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
D ++ +DW + + F+ E+ E +QGNLDP +V + + + + G
Sbjct: 242 VADMDLPADFYSIDWRIDMKRFSAEIPDEKGIQGNLDPA-IVNYDYALHEASKIVEAASG 300
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+IFN GHG+ P DP+ + LV+ V S
Sbjct: 301 RDRYIFNTGHGLLPSTDPEKLKRLVEYVHS 330
>gi|289705150|ref|ZP_06501554.1| uroporphyrinogen decarboxylase [Micrococcus luteus SK58]
gi|289558178|gb|EFD51465.1| uroporphyrinogen decarboxylase [Micrococcus luteus SK58]
Length = 407
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 178/356 (50%), Gaps = 29/356 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G + P+W MRQAGR LPEYRQ+R+ LD C P+ E+T+QP+RR++
Sbjct: 37 LLRALRGQRPDRHPVWFMRQAGRSLPEYRQVREGI-GMLDSCLMPDLVREITMQPVRRHD 95
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI+V G +V GP + T ++ L D L+ I +
Sbjct: 96 VDAAIFFSDIVVPLRLAGVDVEIQPGVGPVLGRAVRTADDVAALPVLEDAALDV---IRE 152
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+++ +L LIGF GAP+T+A+YM+ G +DH R + + + L D+ +
Sbjct: 153 AVAATVAEL-GPRPLIGFAGAPFTLAAYMVEGRPSRDHFGPRRMMHADPETWAALADWAA 211
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF----ENYAARSVGRIISAVRRKYPN-A 240
VS ++L AQ+ +G Q+FD+ AG L ++ + ++ ++ + P+ A
Sbjct: 212 TVSGQFLRAQLESGASAAQLFDSWAGSLSADDYLEHVQPHSRAALAHVADLAGPGVPDGA 271
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA---------LELQKEGPVQGNLDP 291
+ F G G L + R + A+G+D + L+ A + + P+QGN+DP
Sbjct: 272 PLLHFGTGTGEFLHHMRD-AGATAVGVDHRLTLAEAHRRLSANPGPDGRGAVPLQGNIDP 330
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP----FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L +V+ V DV+ SG + NL HG+ P+ D + +V+ + S
Sbjct: 331 ALLAAPWEVLEAHVR---DVVASGAVAPGHVVNLAHGVPPETDAAVLTRVVELIHS 383
>gi|168033872|ref|XP_001769438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679358|gb|EDQ65807.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 183/343 (53%), Gaps = 12/343 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G ++ PP+W+MRQAGRY+ Y+ + +K F + + VE++LQP R +
Sbjct: 72 LLRAVRGEEVDRPPVWMMRQAGRYMKVYQDLCQKHPTFRERSENVDLAVEISLQPWRAFK 131
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP-IF 124
D ILFSDIL + ++ +GP + +PI T ++ + +L +P +
Sbjct: 132 PDGVILFSDILTPFTGMNIPFDILKTKGPIIHNPIRTAADVAKVR---ELVPAEAVPYVG 188
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+++ LR+++ N T++GF GAP+T+ASY++ GG K + A++ + LL L
Sbjct: 189 QALTALREEVGNASTVLGFVGAPFTLASYIVEGGSSKHFTVIKRMAFETPEVLHSLLQKL 248
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ Y+ Q G +QIFD+ A L +FE ++ + +I+SAV+ +P+ I
Sbjct: 249 AESVIIYVRYQADCGAQAVQIFDSWATHLSPVDFEVFSLPYIKQIVSAVKSTHPDLPLIL 308
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ T + + +DW+V ++ A + + QGN+DP L + +
Sbjct: 309 YASGSGGLLERMAS-TGVDVVSVDWTVDMAEARQRIGTQLAVQQGNMDPAALFGTKEFIE 367
Query: 303 DGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
++ + G I NLGHG+ TP+ + + + K+VR
Sbjct: 368 RRIHDTVAKAGRHKHILNLGHGVLVGTPEENVAHFFETGKSVR 410
>gi|220916322|ref|YP_002491626.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954176|gb|ACL64560.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 350
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 172/348 (49%), Gaps = 25/348 (7%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRF-------VENEGPRMDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + +P+ T+ + + P D
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIGNPVRTRADVDALRVPVPKKD 125
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 126 --LPYVL---DGVRAIRAALADRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR
Sbjct: 180 ATAHALFEKLTQAAIVQIEEQVAAGAHAAQIFESWLGELAREDLEEFSFPYLARIAEAVR 239
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
+ I F+ G L+ +L + + +DW +P+ A VQGN D L
Sbjct: 240 KT--GVPSILFSTGTTAHLEPMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V + +L G P +IFNLGHGI TP + K V+D V
Sbjct: 297 LGPRDVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAV 344
>gi|197121558|ref|YP_002133509.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. K]
gi|196171407|gb|ACG72380.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. K]
Length = 350
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 174/348 (50%), Gaps = 25/348 (7%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPR-------MDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + + P D
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALRVPVPKKD 125
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 126 --LPYVL---DGVRAIRAALADRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR
Sbjct: 180 ATAHALFEKLTQAAIVQIEEQVAAGAHAAQIFESWLGELAREDLEEFSFPYLARIAEAVR 239
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
+ I F+ G L+ +L + + +DW +P+ A VQGN D L
Sbjct: 240 KT--GVPSILFSTGTTAHLEPMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ V + +L G P +IFNLGHGI TP + K V+D V
Sbjct: 297 LGPRDVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAV 344
>gi|156100807|ref|XP_001616097.1| uroporphyrinogen decarboxylase [Plasmodium vivax SaI-1]
gi|148804971|gb|EDL46370.1| uroporphyrinogen decarboxylase, putative [Plasmodium vivax]
Length = 422
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 185/343 (53%), Gaps = 24/343 (6%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAI 72
+G + P+W MRQAGRYLPEYRQ+R K +F +MC + E+T+ P++R+ D +
Sbjct: 77 EGRALERIPVWFMRQAGRYLPEYRQMRSK-HDFFEMCQDANLSSEVTIMPLKRFPCDMLV 135
Query: 73 LFSDILVIADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFLNYLLPIFQSISIL 130
+FSDIL++ A+G ++ F+E+ GP D T +E ++ ++ + L ++ +I++
Sbjct: 136 VFSDILIVFVAMGISITFIESVGPTFDQRVTSFEEFQRVSLPLEEVIKNLHYVYDAINLT 195
Query: 131 RKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE 190
++K+ N + ++GF G+P+T+ +Y+ + + + Y+ + +L LSDV
Sbjct: 196 KQKINNAVPILGFAGSPFTLFTYLTKNN-KRTYEDSIRMIYECPEDVHKILGKLSDVCVS 254
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
+L+ QI +G +V+Q+FD++A + H F +++ + R+++ V++ P+A I F K
Sbjct: 255 HLVNQIDSGANVVQLFDSNADVIDTHLFAHFSLFYIKRVVNTVKKLRPHAFIILFLK--- 311
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALELQK--------EGPV--QGNLDPMRLVVGNQV 300
+N+ D + +D L + +G + QG LDP +++ ++
Sbjct: 312 ---ENFH--PDVKHLHIDVLSITHKQLAMNSSSFFYNLFDGKIILQGALDPHIMLLQDEE 366
Query: 301 MIDGVNA--ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
++ + I + + +I NLGHG+ P +NV ++ V
Sbjct: 367 LVSQHTSQMINQIRHTNKYIANLGHGMLPGSRVENVRAFIRAV 409
>gi|330813369|ref|YP_004357608.1| uroporphyrinogen III decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486464|gb|AEA80869.1| uroporphyrinogen III decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 238
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 135/234 (57%), Gaps = 19/234 (8%)
Query: 10 EVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFD 69
E+ + ++ P+WLMRQAGRYLPEY++IRKK KNF++ C ++TLQPI+RY+ D
Sbjct: 3 ELFKKSLNKENPLWLMRQAGRYLPEYQKIRKKQKNFINFCLDVNAATKVTLQPIQRYDLD 62
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRMDPI------TTQEIYLLNPNIDLFLNYLLPI 123
AAI+FSDILVI ALG+ V F +NEGP + TQE F+ L +
Sbjct: 63 AAIIFSDILVIPYALGQQVDFKKNEGPILGDFKLSTFKKTQE--------KEFIKKLKNV 114
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA--YQNSRAFNWLL 181
+ +I RK L +LIGF G+PWT+ Y+++ K +++V+ +N++ LL
Sbjct: 115 YLAIKKTRKLLNKKKSLIGFAGSPWTILVYILNK---KSPKKSQVYKEILKNTKQTKELL 171
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ ++ QI AG D IQ+FD+ AG L + ++ + + RI+ +++
Sbjct: 172 KIIEKFIYIHIEQQIKAGADTIQLFDSWAGLLEKKHYDFFCFQPTKRIVKKIKK 225
>gi|255069999|ref|XP_002507081.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522356|gb|ACO68339.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 429
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 178/356 (50%), Gaps = 20/356 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRK-KFKNFLDMCYTPEYTVELTLQPIRRY 66
++ +G + P+WL RQAGR+LPEY + + + KNFL++ P+ E+TLQPIRRY
Sbjct: 58 MIRAAKGQKVERTPVWLFRQAGRHLPEYMEYKNARGKNFLELLKDPKDVAEVTLQPIRRY 117
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNP---NIDLFLNYLLP 122
N DA ILFSDILV+A+A+ NV G + +P+ E P N++ L +++
Sbjct: 118 NIDAGILFSDILVVAEAMNINVEMPGGLGILVPNPLRNPEDLSRLPRSVNVEERLGHVIE 177
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ I+ + ++ LIGF APWT+ YM+ G K+ + ++ LL+
Sbjct: 178 AIKEINRQIEAEALNVPLIGFSAAPWTLMYYMVGGSSKKNTDVGMQWLREHPNESQQLLE 237
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ V +YL AQI AGV ++Q+F+ + + F ++A S+ +I ++ ++P
Sbjct: 238 RLTTVVIDYLDAQIKAGVHMVQVFEAMCEHIDKDCFLSFAMPSLTKIAKELKARHPEIPL 297
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-------QGNLDPMRLV 295
+ FA+ A Y L + + + +D P A G V QGN DP L
Sbjct: 298 LVFARDAPYALP-LLQAAGYDVMTVDTVKPGDVARRELAIGAVGADPKQLQGNFDPALLH 356
Query: 296 V---GNQVMID-GVNAILDVLGSGPFIFNLGHGITPQVDPKNV---LDLVKTVRSE 344
++ I+ V +L G +I NLG G+T DP V +D V V E
Sbjct: 357 AKTGSDEAAIEKAVRNMLISFGPQKYIANLGSGLTGLEDPSKVAFFVDCVHKVSEE 412
>gi|223998822|ref|XP_002289084.1| uroporphyrinogen III decarboxylase [Thalassiosira pseudonana
CCMP1335]
gi|220976192|gb|EED94520.1| uroporphyrinogen III decarboxylase [Thalassiosira pseudonana
CCMP1335]
Length = 403
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 169/350 (48%), Gaps = 15/350 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G + P+WLMRQAGRY+ +RQ K+ F + TP +EL+LQ R Y
Sbjct: 54 LVRCASGQQVERTPVWLMRQAGRYMSAFRQYSDKYP-FRERSETPSMAIELSLQCHRAYG 112
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL LG V+ GP + T ++ L + + LP +
Sbjct: 113 MDGIIMFSDILTPLPTLGIEFDVVKGLGPVISTEVRTEADVAKLKDVESVNFDETLPFIR 172
Query: 126 SI--SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN----SRAFNW 179
I S+ ++ + +LIGF GAP+T+A+Y I G K + + S+A +
Sbjct: 173 EILGSLSKEAEEANTSLIGFVGAPFTLAAYTIEGKSSKHCLSTKKMMMADEDGSSKAVSQ 232
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LD L+ + Y QI G VIQ+F++ A L +FE +A + + I ++ KYP+
Sbjct: 233 FLDKLAVMIGNYACHQIECGAQVIQVFESWAHQLSPRQFEAFAKPAAQKAIRIIKEKYPD 292
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I FA G L+ + + + I +DWSV + A + L + P+ GN+DP L
Sbjct: 293 VPVIYFANGGSSYLELQKDM-GCDMIAVDWSVDMKEARKILGPDIPISGNIDPTILFGTK 351
Query: 299 QVMIDGVNAILDVLGS-GPFIFNLGHGI---TPQVDPKNVLDLVKTVRSE 344
+ + V +D G G + NLGHG+ TP+ ++D K R +
Sbjct: 352 EQIEQAVRDCIDKAGGPGKHLLNLGHGVMQGTPEEAVGWLVDECKRYRGQ 401
>gi|218507364|ref|ZP_03505242.1| uroporphyrinogen decarboxylase [Rhizobium etli Brasil 5]
Length = 117
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 92/115 (80%)
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+I+++R + P+A+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGN
Sbjct: 1 MIASIRSQRPHARIIAFAKGAGYQLKAYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGN 60
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LDPMR+V G + + +G++ IL LG GP IFNLGHGITPQ DP +V LV+ VR
Sbjct: 61 LDPMRVVAGGRALEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVERVRG 115
>gi|239918011|ref|YP_002957569.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
gi|281415811|ref|ZP_06247553.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
gi|239839218|gb|ACS31015.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
Length = 407
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 181/365 (49%), Gaps = 41/365 (11%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L L+G + P+W MRQAGR LPEYR++R+ LD C P+ E+T+QP+R
Sbjct: 34 ASPLLRALRGQRPDRHPVWFMRQAGRSLPEYRRVREGI-GMLDSCLMPDLVREITMQPVR 92
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++ DAAI FSDI+V G +V P + P+ Q + + D+ LP+
Sbjct: 93 RHDVDAAIFFSDIVVPLRLAGVDVEIQ----PGVGPVLGQAVRTPD---DV---AALPVL 142
Query: 125 Q--SISILRKKLPNHIT------LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ ++R+ + + LIGF GAP+T+A+YM+ G +DH R + +
Sbjct: 143 EDAALDVIREAVAATVAELGPRPLIGFAGAPFTLAAYMVEGRPSRDHFGPRRMMHADPET 202
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF----ENYAARSVGRIISA 232
+ L + + VS ++L AQ+ +G Q+FD+ AG L ++ + ++ ++ +
Sbjct: 203 WAALAGWAATVSGQFLRAQLESGASAAQLFDSWAGSLSADDYLEHVQPHSTAALAHVADL 262
Query: 233 VRRKYPN-AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA---------LELQKE 282
P+ A + F G G L + R + A+G+D + L+ A + +
Sbjct: 263 AGPGVPDGAPLLHFGTGTGEFLHHMRD-AGATAVGVDHRLTLAEAHRRLSANPGPDGRGA 321
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP----FIFNLGHGITPQVDPKNVLDLV 338
P+QGN+DP L +V+ V DV+ SG + NL HG+ P+ D + +V
Sbjct: 322 VPLQGNIDPALLAAPWEVLEAHVR---DVVASGAVAPGHVVNLAHGVPPETDAAVLTRVV 378
Query: 339 KTVRS 343
+ + S
Sbjct: 379 ELIHS 383
>gi|269103662|ref|ZP_06156359.1| uroporphyrinogen III decarboxylase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163560|gb|EEZ42056.1| uroporphyrinogen III decarboxylase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 292
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 16/291 (5%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ----EIYLLNPNIDLFL 117
+RR+ DAAILFSDIL I DA+G + F EGP+ + PIT + +I L +P +L
Sbjct: 1 MRRFELDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGEL-- 58
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 59 QY---VMNAVRQIRKDLQGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTL 115
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 116 HLLLDKLADSVIEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIREN 175
Query: 238 PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
+ F K G L+ T + +GLDW++ ++ A + + +QGN+DP L
Sbjct: 176 EGRRVPVTLFTKNGGMWLEQI-AATGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDPSML 234
Query: 295 VVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL+ G G +FNLGHGI V P+N V V
Sbjct: 235 YAQPERIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAEVFVNAVHE 285
>gi|159482960|ref|XP_001699533.1| uroporphyrinogen-iii decarboxylase [Chlamydomonas reinhardtii]
gi|158272800|gb|EDO98596.1| uroporphyrinogen-iii decarboxylase [Chlamydomonas reinhardtii]
Length = 390
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 173/330 (52%), Gaps = 20/330 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G+ + PP+W+MRQAGRY Y+ + KK F + + VE++LQP +
Sbjct: 50 MLRAIRGDKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWHAFK 109
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL G N+ F GP MDPI T + + L P + +
Sbjct: 110 PDGVILFSDILTPLP--GMNIPFDMAPGPIIMDPIRT--MAQVEKVTKLDAEAACPFVGE 165
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ LR + N ++GF GAP+T+A+Y++ GG K+ + A+ + LLD L+
Sbjct: 166 SLRQLRTYIGNQAAVLGFVGAPFTLATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKLA 225
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A+Y+ Q AG V+QIFD+ A L +F+ ++ + ++I +VR+ +P+ I +
Sbjct: 226 DNVADYVRYQADAGAQVVQIFDSWASELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIILY 285
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMI 302
G+G +L+ + + I LD SV F +++ G QGN+DP ++ G++ I
Sbjct: 286 ISGSGGLLERMASCS-PDIISLDQSV--DFTDGVKRCGTNFAFQGNMDP-GVLFGSKDFI 341
Query: 303 DGVNAILDVLGSG-----PFIFNLGHGITP 327
+ ++D + + + NLGHG+ P
Sbjct: 342 E--KRVMDTIKAARDADVRHVMNLGHGVLP 369
>gi|156030999|ref|XP_001584825.1| hypothetical protein SS1G_14280 [Sclerotinia sclerotiorum 1980]
gi|154700671|gb|EDO00410.1| hypothetical protein SS1G_14280 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 224
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 118/204 (57%), Gaps = 13/204 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL G+ + PP+W+MRQAGRYLPEY + + K +F + C +PE LTLQPI R+
Sbjct: 13 ILRTAWGHKVERPPMWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPIERFA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF--LN 118
DAAI+FSDILVI ALG V V+ +GP P Q +L N+D+ L+
Sbjct: 72 GLVDAAIIFSDILVIPQALGMTVEMVDKKGPHFPEPLESPYDGQYERVLKKNVDVAAELD 131
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y ++++I++ R KL + L GFCGAPWT+ YM+ GG K + + + Y+ A
Sbjct: 132 Y---VYKAITLTRHKLKGRVPLFGFCGAPWTLLCYMVEGGGSKLFVKTKTWVYKYPEASK 188
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDV 202
LL +++V EYL Q+ AG V
Sbjct: 189 ALLQKIAEVCVEYLALQVKAGAQV 212
>gi|168000031|ref|XP_001752720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696251|gb|EDQ82591.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 387
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 164/343 (47%), Gaps = 9/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G P+WLMRQAGRY+ ++R+ + +F + T + +EL+LQP +
Sbjct: 33 LLRVARGEEAERTPVWLMRQAGRYMADFRKFSDRI-SFRERSETADIAIELSLQPWLAFR 91
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL ALG V+ +GP + P+ T E +D L I Q
Sbjct: 92 TDGVIMFSDILTPLPALGIEFTMVKGKGPVIPSPVRTLEDIQNLRTLDDPDQSLPFIRQI 151
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S LRK++ TLIGF G PWT+A+Y + G K+ + + N + L L+D
Sbjct: 152 LSSLRKEVEGKATLIGFIGTPWTLAAYAMEGSSDKNLIKTKSIMMHNPEILHAFLAHLTD 211
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y+ QI +G ++Q+FD+ A L +F ++ ++I V+ P+ I A
Sbjct: 212 ALVTYVCHQIDSGAQIVQLFDSWAHHLSPEQFSEFSWPYAEQLIDRVKIARPDVPLIFHA 271
Query: 247 KGA-GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMI 302
G G + +R +GLDW+ + A L GP +QGN+DPM L V+
Sbjct: 272 NGGTGKLHIVAQRKHQDVVVGLDWATEMREARSLL--GPKTVLQGNVDPMVLFGSEDVIR 329
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G I N+GHG+ Q P+ + L V E
Sbjct: 330 RAAEQNIRDAGGNYHILNVGHGVV-QGTPEESVKLFCQVARES 371
>gi|253787601|dbj|BAH84860.1| putative uroporphyrinogen decarboxylase [Cucumis sativus]
Length = 275
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 153/275 (55%), Gaps = 9/275 (3%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ +K+ +F + T + VE++LQP ++ D I+FSDIL A
Sbjct: 6 IMRQAGRYMAIYRKLAEKYPSFRERSETTDLIVEISLQPWEAFHPDGVIIFSDILTPLPA 65
Query: 84 LGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHITL 140
LG + GP + PI ++E + L+P IDL LN+ + +S+ +LRK++ +
Sbjct: 66 LGVPFDIEDIRGPVIHSPIRSEEGLKALHP-IDLDKLNF---VGESLKLLRKEVEGSAAV 121
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
+GF GAPWT+A+Y++ GG + + + + LL + +EY+I QI G
Sbjct: 122 LGFVGAPWTIATYIVEGGTTRTYTTIKRMCHTAPHVLKTLLSHSTQAISEYIIYQIEHGA 181
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
IQIFD+ G L +E+++ + +I+S VR K P + + G G +L+ + T
Sbjct: 182 HCIQIFDSWGGQLPPDMWESWSKPYIQKIVSTVRDKCPETPLVLYINGNGGLLERMKG-T 240
Query: 261 DSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+ IGLDW+V ++ L + VQGN+DP L
Sbjct: 241 GVDVIGLDWTVDMADGRNRLGTDISVQGNVDPESL 275
>gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1]
Length = 643
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 34/305 (11%)
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDL--FLNYLLPIF 124
DAAI+FSDILV+ ALG GP PI T E + LNP++D+ L Y +F
Sbjct: 109 DAAIIFSDILVVPQALGLECLMQPGIGPVFPKPIETPEDLARLNPSVDVQAELGY---VF 165
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I++ R +L H LIGF GAPWT+ +YMI G K + R + YQ A + LLD +
Sbjct: 166 EAITLTRHRLQGHAPLIGFAGAPWTLFAYMIEGKSSKTWDKARAWLYQYPEASHRLLDMI 225
Query: 185 SDVSAEYLIAQIHAGVDVIQ-----------------------IFDTHAGCLGEHEFENY 221
++ + +YL+ Q+HAG ++Q +FD+ AG L F +
Sbjct: 226 TNCTIQYLVGQVHAGAQMLQRRWPINSTPHPHPPPSAADLSGPVFDSWAGSLQHDIFREF 285
Query: 222 AARSVGRIISAVRRKY-PNA-KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALE 278
+ RI S+V+ P A I FAKGA + +K+ TD + GLD + + A
Sbjct: 286 VLPRLARIASSVKALLGPKAVPMICFAKGAAWAMKDLEH-TDYDVQGLDETADVEQVAAL 344
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
L+ +QGNLDP + + V+ V A++ + I NLGHG+TP ++P+ V LV
Sbjct: 345 LKGRVALQGNLDPAVMYASDDVIRARVGAMMAKFPARGHIANLGHGMTPTMEPRAVAALV 404
Query: 339 KTVRS 343
V +
Sbjct: 405 DAVHA 409
>gi|239789762|dbj|BAH71483.1| ACYPI004051 [Acyrthosiphon pisum]
Length = 198
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 123/196 (62%), Gaps = 8/196 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE+R++R ++ +F +C TPE E+TLQPI
Sbjct: 7 KNDRILRAARGEEVDRIPVWVMRQAGRYLPEFRELRSRY-DFFTICRTPELACEVTLQPI 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLF--LNY 119
+RY+ DA+I+FSDILVI ALG V + GP + DP+ ++ LN +ID+ L Y
Sbjct: 66 QRYDLDASIIFSDILVIVQALGMIVEMQPSVGPVIPDPLKEPIDLDRLNQSIDVKQELGY 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F++I++ R +L + LIGF GAPWT+ YMI GG K + + + Y+
Sbjct: 126 ---VFEAITLTRHRLNGQVPLIGFTGAPWTLMCYMIEGGGSKTMSKAKKWLYKYPEESKK 182
Query: 180 LLDFLSDVSAEYLIAQ 195
LL L+D+ +YLI Q
Sbjct: 183 LLQILTDIIVKYLIEQ 198
>gi|300726134|ref|ZP_07059591.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Prevotella bryantii
B14]
gi|299776604|gb|EFI73157.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Prevotella bryantii
B14]
Length = 355
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 175/341 (51%), Gaps = 15/341 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL LQG P +W MRQAGR LP+Y ++R +F ++ +TP+ ++TL P+
Sbjct: 21 ILRTLQGKKTERPAVWFMRQAGRVLPDYLKLRD-LHSFDEIMHTPDLCAQVTLMPVHTIG 79
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ---EIYLLNPNIDLFLNYLLPIF 124
DAAILFSDILV+ A+G N+ + + +GP Q L P+ L+Y I+
Sbjct: 80 VDAAILFSDILVVPTAMGANISWTD-KGPVFSTPLCQYSDASKQLKPDASK-LDY---IY 134
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV-FAYQNSRAFNWLLDF 183
++I ++ ++ + LIGFCG P T YM+ G + + V + + N + L++
Sbjct: 135 RNIDEIKSRISDGTPLIGFCGGPLTTLCYMLQGRSTDNQFNDAVSYIFSNPAETDRLIEA 194
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ EY Q+ GV + QIF+T+AG L ++E+ + ++ RI AV+ I
Sbjct: 195 LTEMTIEYARNQVKHGVQLFQIFETNAGVLPQNEYIAHFMPAIRRIGQAVKEM--GVPVI 252
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
FAKG G L+ + + +DW + A +L +QGNLDP L +++
Sbjct: 253 YFAKGLGLGLQAVTPDM-CDFVNIDWQMDFYEARKLVNPAIGLQGNLDPRILFASEEIIQ 311
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + +I NLGHG+ PQ K++ + V+
Sbjct: 312 QKLESYRPYWEEHHNWILNLGHGVPPQAPLKSLQFITNYVK 352
>gi|323449657|gb|EGB05543.1| hypothetical protein AURANDRAFT_30614 [Aureococcus anophagefferens]
Length = 389
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 172/352 (48%), Gaps = 18/352 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + P+W+MRQAGR++ YR + KK+ F + PE +E++LQP Y
Sbjct: 41 LLRAARGEAVERTPVWMMRQAGRHMQVYRDLVKKYPTFRERSEIPEAALEISLQPWEAYG 100
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL A+G + + E + PI T+ L N D + +
Sbjct: 101 VDGVILFSDILTPLPAMGVDFQISEGGAIAISPIRTEAHLAELKKANFDAATACPF-VGE 159
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA--FNWLLDF 183
+ LR K+ + T++GF G P+T+ASY++ G G V ++ + + +LD
Sbjct: 160 VLGKLRDKVGSSATVLGFVGLPFTLASYLVEGKTGTTSGFAEVGKMRSEQPELLHGILDL 219
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ Y Q+ +G VIQ+FD+ AG L E ++ +A ++I A++ K+P I
Sbjct: 220 LAENIGAYACYQVESGAQVIQVFDSWAGHLPEDQYLEFAVPYQKKVIEAIKAKHPETPVI 279
Query: 244 SF------AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
+ +K G++ ++ + ++ + +D++V G +QGNLDP L
Sbjct: 280 IYMAPDVHSKDGGFL--DHLAASGADCVSVDYTVDFGETRARLPAGVAMQGNLDPKILRD 337
Query: 297 GNQVMI-DGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVRSE 344
G I + IL I NLGHGI TP+ K +D V+ R++
Sbjct: 338 GPLDKIKEETEKILAAGNCNMHIMNLGHGIEADTPEPHAKFFVDTVQAFRAK 389
>gi|269977769|ref|ZP_06184729.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris 28-1]
gi|269934073|gb|EEZ90647.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris 28-1]
Length = 402
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 172/375 (45%), Gaps = 61/375 (16%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR R L C TP+ E+TLQP+RR++ DAA+ FSDI++
Sbjct: 31 PVWFMRQAGRSLPEYRAARAGV-GMLTACTTPDLVAEITLQPVRRHDVDAAVFFSDIVIP 89
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
G + V+ GP +D P+ + + + + L ++ I + ++ R++L
Sbjct: 90 LYLCGVGIDMVDGIGPVLDSPV--RSVADVERLVGLEVSDWSVIEDAAALGRRELAFEKV 147
Query: 140 LIGFCGAPWTVASYMISGGFI-------KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
L+GF GAP+T+ASY+I G + + R F +A+ L + + +S E+L
Sbjct: 148 LLGFAGAPFTLASYLIESGQPGVSKAQRRACRRTREFMRCQPQAWAKLATWCARLSGEFL 207
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
AQI G + +Q+FD+ G L E E+ YA + A + ++FA A ++
Sbjct: 208 AAQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK----GVNHVNFAVAASHL 263
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN-------------- 298
L+ D ++G D S+ + A K +QGNL+P LV
Sbjct: 264 LEALGETADVVSVGTDISLKAAAARLPGKV--LQGNLNPELLVAATTGDSGMAPHEPESG 321
Query: 299 -----------------------------QVMIDGVNAILDVLGSGP-FIFNLGHGITPQ 328
+ + A+L+ + P IFNLGHG+ P+
Sbjct: 322 TGGEGDGGTCGAPHGKTSSTSTIKMFSAKEKLWQDAEAVLEAGRAAPAHIFNLGHGVIPE 381
Query: 329 VDPKNVLDLVKTVRS 343
DP + +LV V +
Sbjct: 382 TDPGLLTELVARVHA 396
>gi|329945531|ref|ZP_08293269.1| putative uroporphyrinogen decarboxylase [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528776|gb|EGF55725.1| putative uroporphyrinogen decarboxylase [Actinomyces sp. oral taxon
170 str. F0386]
Length = 438
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 174/391 (44%), Gaps = 58/391 (14%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRY 66
ILE L G P+W MRQAGR LPEYR +R++ L+ C PE E TLQP+RR+
Sbjct: 33 ILEALAGRRPERTPVWFMRQAGRSLPEYRALRERAGIPMLEACLDPELAAEATLQPVRRH 92
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLL-------NPN----- 112
DAA+ FSDI+V G VR E GP +D P+ + +E+ L P
Sbjct: 93 GVDAAVFFSDIMVPLRLAGVRVRIEEGVGPVLDAPVRSGREVTELVAHRFGDGPGPETTA 152
Query: 113 ----------------------IDLFLNYLLPIFQSISILRKKLPNH-------ITLIGF 143
++L + + +S + H ++ F
Sbjct: 153 GTAGTAGAEGVAAIEEAVRRVVVELGSPQAPGVREGLSERARAGLEHSAGATGWTPVLAF 212
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+A+Y++ G +DH R + +++ L+ + + ++ E++ Q+ AG
Sbjct: 213 GGAPFTLAAYLVEGRPSRDHLAARTLMRADPGSWDRLMTWCARLTGEFIATQVRAGAAAA 272
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-----FISFAKGAGYMLKNYRR 258
Q+FD+ AG L + A + A R+ I F G +L R+
Sbjct: 273 QLFDSWAGSLSPRAYRERVAPYSALALDAARQAVSPTTGEVPPLIHFGTGTARLLGLMRQ 332
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-------PVQGNLDPMRLVVGNQVMIDGVNAILDV 311
++AIG+D + L A+E + PVQGNLDP L ++ + V+A+L
Sbjct: 333 -AGADAIGVDERIELGEAIEALAQADPQAGACPVQGNLDPALLAAPWSLVAEEVDALLAA 391
Query: 312 LGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ P + NLGHG+ P + + +V V
Sbjct: 392 GRAAPGHVVNLGHGVPPDTEADVLTRIVARV 422
>gi|153003995|ref|YP_001378320.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. Fw109-5]
gi|152027568|gb|ABS25336.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. Fw109-5]
Length = 350
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 176/350 (50%), Gaps = 22/350 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LE + ++ P+W+MRQAGRY P YR +R FL++C +PE ++T+ PI
Sbjct: 7 HRFLEACRKQPVDRLPVWMMRQAGRYQPSYRAVRANV-GFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPR-------MDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + + P D
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALKVPAPKKD 125
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 126 --LPYVL---DGVRAIRAALRDRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
R + L + L+ + + QI AG QIF++ G L + E +A + RI AV+
Sbjct: 180 RTAHALFEKLTQAAIVQIEEQIAAGAQAAQIFESWLGELDRADLEEFAFPYLARIAEAVK 239
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
R I F+ G L+ +L + + +DW +P+ A +QGN+D L
Sbjct: 240 RT--GVPSIFFSTGTTAHLEPISKL-GYDVVSVDWRIPIDEARRRAPGVAIQGNMDSTVL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +V ++ +I+ G P +IFNLGHGI P + V +V V +
Sbjct: 297 LGPKEVAVERALSIVRAAGREPGYIFNLGHGIQPGTPTETVKAVVDAVHA 346
>gi|309790866|ref|ZP_07685410.1| uroporphyrinogen decarboxylase [Oscillochloris trichoides DG6]
gi|308227153|gb|EFO80837.1| uroporphyrinogen decarboxylase [Oscillochloris trichoides DG6]
Length = 312
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 166/315 (52%), Gaps = 19/315 (6%)
Query: 38 IRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR 97
+R+++ FL M PE E+TLQP + ++ DAAI+F+DIL + LG + F + EGP
Sbjct: 1 MRERY-GFLQMVKIPEVAAEVTLQPAQAFDIDAAIIFADILPPLEGLGIELTFEKGEGPV 59
Query: 98 M-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
+ P + +P Y L +I I++++L I L GF GAP+T+AS
Sbjct: 60 IHNPVRSPADIAALKRCDPRETA--AYTL---DAIRIVQRELNGRIPLFGFSGAPFTLAS 114
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC 212
Y I GG +++ + + Y++ ++++ L++ L+ + ++YLIAQ+ AG +++QIFD+ AG
Sbjct: 115 YAIEGGGSREYRRTKQLMYRDPQSWHALMEKLNVLVSDYLIAQVEAGCNIVQIFDSWAGS 174
Query: 213 LGEHEFENYAARSVGRIISAVR--RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
L ++F Y V +I+ VR P F + G ML + ++ IGLDW
Sbjct: 175 LSPNDFAEYVLPHVKTVIATVRAATDVPIIFFGTEMFGMSSMLSD----VGADVIGLDWR 230
Query: 271 VPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQ 328
V L L + VQGNLDPM L + IL G P IFN+GHGI +
Sbjct: 231 VQLDEGWAALGHKVAVQGNLDPMTLHAPWPEIERRAADILRRAGGRPGHIFNVGHGILTE 290
Query: 329 VDPKNVLDLVKTVRS 343
+NV LV V +
Sbjct: 291 TPEENVGRLVDFVHN 305
>gi|171769477|sp|A7H9E0|DCUP_ANADF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 176/350 (50%), Gaps = 22/350 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LE + ++ P+W+MRQAGRY P YR +R FL++C +PE ++T+ PI
Sbjct: 3 HRFLEACRKQPVDRLPVWMMRQAGRYQPSYRAVRANV-GFLELCRSPELIAQVTVAPIDE 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPR-------MDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + + P D
Sbjct: 62 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALKVPAPKKD 121
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 122 --LPYVL---DGVRAIRAALRDRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
R + L + L+ + + QI AG QIF++ G L + E +A + RI AV+
Sbjct: 176 RTAHALFEKLTQAAIVQIEEQIAAGAQAAQIFESWLGELDRADLEEFAFPYLARIAEAVK 235
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
R I F+ G L+ +L + + +DW +P+ A +QGN+D L
Sbjct: 236 RT--GVPSIFFSTGTTAHLEPISKL-GYDVVSVDWRIPIDEARRRAPGVAIQGNMDSTVL 292
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +V ++ +I+ G P +IFNLGHGI P + V +V V +
Sbjct: 293 LGPKEVAVERALSIVRAAGREPGYIFNLGHGIQPGTPTETVKAVVDAVHA 342
>gi|330443886|ref|YP_004376872.1| Uroporphyrinogen decarboxylase [Chlamydophila pecorum E58]
gi|328806996|gb|AEB41169.1| Uroporphyrinogen decarboxylase [Chlamydophila pecorum E58]
Length = 330
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 172/339 (50%), Gaps = 22/339 (6%)
Query: 10 EVLQGNVINPPPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++LQ + PP+W +RQ GRY+P+Y +++ + K+F + PE +E TL +
Sbjct: 5 DLLQRQAPHRPPVWFLRQVGRYMPQYHELKGSQPLKSFF---HNPEAIIEATLLGPELLH 61
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILF+DIL I D + F + GP+++ TQ ++ P + YL ++I
Sbjct: 62 VDAAILFADILSILDGFCLSYDF--SPGPKIEFSPTQPLFF-TPEPEETFRYLT---EAI 115
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S L +L + L+GF +P+T+ASY++ GG KD + F Y+ F LLD L +
Sbjct: 116 STLTSRL--SVPLLGFAASPFTLASYLLDGGASKDFSKTMAFLYRYPEKFQELLDTLINS 173
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+A YL Q+ AG +Q+F++ + L F Y +I+ ++ K I +
Sbjct: 174 TAIYLELQVRAGASAVQLFESSSLRLPSALFSQYVTEPNKALIAKLKEKQ-----IPVSL 228
Query: 248 GAGYMLKNYRRLTDSNAIGL--DWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+N+ +L D+ A L D+ + L+ FA K QGN DP ++ ++
Sbjct: 229 FCRCFEENFSKLLDTQADTLHPDYHIDLARFAKVAPKGLSFQGNFDPALFLLPEPLLDTY 288
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ L+ L P +IFN GHGI P+ +NV ++ V+
Sbjct: 289 LETFLESLRFLPNYIFNSGHGILPETPLENVQHVIAYVQ 327
>gi|238605566|ref|XP_002396486.1| hypothetical protein MPER_03269 [Moniliophthora perniciosa FA553]
gi|215469152|gb|EEB97416.1| hypothetical protein MPER_03269 [Moniliophthora perniciosa FA553]
Length = 280
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 148/271 (54%), Gaps = 17/271 (6%)
Query: 76 DILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDL--FLNYLLPIFQSISILR 131
DILV+ A+G V + N GP+ DP +T +++ L +D+ L Y +F++++ R
Sbjct: 1 DILVVPQAMGMEV--LMNPGPQFPDPLVTPEDVKKLREVVDVNKELGY---VFEALTKTR 55
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+L + LIGFCGAPWT+ +YMI GG K +++ + ++ LL ++DV ++
Sbjct: 56 MELNGEVPLIGFCGAPWTLLAYMIEGGGTKTFQKSKTWIFKYPEESKVLLMRIADVCVDF 115
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PNAKFISFA 246
L+ Q+ AG ++Q+FD+ AG L H+F ++ ++ I VRR+ P FA
Sbjct: 116 LVGQVKAGAQLLQVFDSWAGELSPHDFNLFSFPTLQHISKGVRRRLREENIPEVPMTLFA 175
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGA Y L + + +GLDW + + A L + +QGN+DP L G + V
Sbjct: 176 KGANYALSFLAENSGYDVLGLDWCIDPAEARRLVGTKVALQGNMDPNILYAGKPAIESAV 235
Query: 306 NAILDVL--GSGPFIFNLGHGITPQVDPKNV 334
+ + G G +I NLGHGITP VDP++V
Sbjct: 236 KRVCEGFRSGKGGWIANLGHGITPGVDPEDV 266
>gi|172044644|sp|Q2IPY2|DCUP_ANADE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 25/348 (7%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 3 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 61
Query: 66 YNFDAAILFSDILVIADALGRNVRF-------VENEGPRMDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + +P+ T+ + + P D
Sbjct: 62 FGFDAAILFSDILVHLPAMGLDLTFEKGEKGKGDGGPKIGNPVRTRADVDALRVPVPKKD 121
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 122 --LPYVL---DGVRAIRTALADRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR
Sbjct: 176 ATAHALFEKLTQAAIVQIEEQVAAGAQAAQIFESWLGELAREDLEEFSFPYLARIAEAVR 235
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
+ I F+ G L+ +L + + +DW +P+ A VQGN D L
Sbjct: 236 KT--GVPSIIFSTGTTAHLERMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLL 292
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ +V + +L G P +IFNLGHGI TP + K V+D V
Sbjct: 293 LGPREVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAV 340
>gi|86157515|ref|YP_464300.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774026|gb|ABC80863.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 350
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 173/348 (49%), Gaps = 25/348 (7%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRF-------VENEGPRMDPITTQ----EIYLLNPNID 114
+ FDAAILFSDILV A+G ++ F + +P+ T+ + + P D
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLTFEKGEKGKGDGGPKIGNPVRTRADVDALRVPVPKKD 125
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L Y+L + +R L + + LIGF G P+TVASY + GG + + + Y
Sbjct: 126 --LPYVL---DGVRAIRTALADRVPLIGFVGGPFTVASYAVEGGS-QGFTRLKTMLYAEP 179
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR
Sbjct: 180 ATAHALFEKLTQAAIVQIEEQVAAGAQAAQIFESWLGELAREDLEEFSFPYLARIAEAVR 239
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
+ I F+ G L+ +L + + +DW +P+ A VQGN D L
Sbjct: 240 KT--GVPSIIFSTGTTAHLERMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI---TPQVDPKNVLDLV 338
+ +V + +L G P +IFNLGHGI TP + K V+D V
Sbjct: 297 LGPREVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAV 344
>gi|217073550|gb|ACJ85135.1| unknown [Medicago truncatula]
Length = 351
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 148/269 (55%), Gaps = 5/269 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+++ +G+ ++ PP W+MRQAGRY+ YR++ +K +F + T + VE++LQP + +
Sbjct: 58 LVKAARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWKAFR 117
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL A G + + GP + PI ++E + +L+P ID + L + +
Sbjct: 118 PDGVIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHP-IDF--DKLRFVGE 174
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ IL++++ ++GF GAPWT+A+Y++ G + + + + LL LS
Sbjct: 175 SLKILQQEVGGDAAVLGFVGAPWTLATYIVERGTTRTYTNIKSMCHTAPHILRTLLSHLS 234
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
A+Y++ Q+ +G IQIFD+ G L H +E ++ + I++ V++K P S
Sbjct: 235 KAIADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVNLVKKKVPRHTTCSL 294
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
K L T + IGLDW+V ++
Sbjct: 295 YKMENGGLLERMVDTGVDVIGLDWTVDMA 323
>gi|327399381|ref|YP_004340250.1| Uroporphyrinogen decarboxylase [Hippea maritima DSM 10411]
gi|327182010|gb|AEA34191.1| Uroporphyrinogen decarboxylase [Hippea maritima DSM 10411]
Length = 328
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 165/345 (47%), Gaps = 26/345 (7%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ + L+ L+G P+W MRQAGR+L YR+IR+K+ L+M E VE+TL P
Sbjct: 2 KQSELFLKTLKGEKAGYTPVWFMRQAGRFLKSYRRIREKYP-LLEMFTNKELIVEITLLP 60
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPR--MDPITTQEIYLLNPNIDLFLNYL 120
++ DA I+FSDIL+ G + + + + P MD Q Y N L L
Sbjct: 61 -KKLGVDALIIFSDILIPLKLFGAKIIYEDGKSPSVIMDKSNIQ--YHEN------LENL 111
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISG-GFIKDHGQNRVFAYQNSRAFNW 179
+F++I + K+ + L+GF AP+T+ Y+ G F K G Y+N F
Sbjct: 112 SFLFEAIGEV-KRHKKDLALLGFAAAPFTLLCYVFGGVEFFKLRG----LMYENPDGFKK 166
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D + ++ +YL Q+++G D +Q+FD+ AG L E + RI +++ P+
Sbjct: 167 LMDLTTKMTIDYLNMQLNSGCDAVQLFDSWAGLLDEKTYRELVLPFNQRIAKSIK---PS 223
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
FI + ++L D + +DW L + VQGNLD L
Sbjct: 224 IYFIKNSHHLNHLLNK----MDFDGFSIDWRSDL-VQVYTSTNRCVQGNLDNTVLFADEA 278
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL P IFNLGHG+ PQ D + + LV + +E
Sbjct: 279 TIKTKTKEILKQTEKIPHIFNLGHGVLPQTDEEKIKMLVDFIHNE 323
>gi|114556202|ref|XP_001154191.1| PREDICTED: similar to Chain A, Gly156asp Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 3 [Pan
troglodytes]
Length = 313
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAP A Q
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAP----------------------ALQ---------- 161
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
+ + HAG Q+F+ +F R V + + A R+ A
Sbjct: 162 ----------LFESHAGHLGPQLFN---------KFALPYIRDVAKQVKARLREAGLAPV 202
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I FAK + L+ + +GLDW+V A E + K +QGNLDP L +
Sbjct: 203 PMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEE 261
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 262 EIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 303
>gi|323455110|gb|EGB10979.1| hypothetical protein AURANDRAFT_12414 [Aureococcus anophagefferens]
Length = 360
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 171/343 (49%), Gaps = 24/343 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQPIRRY 66
+L + +G + P+WL RQAGR++ EY ++K K+FL + P E+TLQP+RRY
Sbjct: 4 LLRLARGEAVEEAPVWLFRQAGRHMAEYNAYKEKTGKHFLQLLDDPLDVAEVTLQPLRRY 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM----DPITT------QEIYLLNPNIDLF 116
DAAILFSDILV+ AL +VR VE G R +P+TT L
Sbjct: 64 GVDAAILFSDILVVPQAL--DVR-VEMPGGRGIVVPEPLTTGPALLEAAKKAAADPAALV 120
Query: 117 LNYLLPIFQSISILRK-KLPNHI--TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
L + +++S +R +L + TL+GF APWT+ Y + GG ++ FA N
Sbjct: 121 AKRLNHVTRAVSEIRSAQLAEDLDRTLLGFSAAPWTLLFYTV-GGSSRNQPPGIDFARAN 179
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ +D+ EY+ AQ+ AG +Q+F+ LG H+FE A + + + +
Sbjct: 180 PDETHAMLEAYTDLVVEYMSAQVDAGAHALQVFEAMGMTLGRHDFEVLALPHLESLATKL 239
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTD--SNAIGLDWSVPLSFALELQKEGPV-QGNLD 290
+ ++P+ + FA+G +L + I LD + + + G V QGNLD
Sbjct: 240 KARHPDVPLLVFARGVEDPAGVNAKLQSFGYDVITLDTAADRAASRSSLGAGQVLQGNLD 299
Query: 291 PMRLVVGNQV---MIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
P L+ + D + A+L LG I NLG G+ + D
Sbjct: 300 PKLLLADGSSEAKLHDELEAMLRALGPDKLIANLGEGLMGKED 342
>gi|323454186|gb|EGB10056.1| hypothetical protein AURANDRAFT_71143 [Aureococcus anophagefferens]
Length = 388
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 168/345 (48%), Gaps = 12/345 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P+WLMRQAGRY+ ++R+ K F + +P+ EL+LQ R +
Sbjct: 41 LVRAARGEDVERTPVWLMRQAGRYMADFRKYSDKIP-FRERSESPDIATELSLQCWRAFG 99
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY----LLP- 122
D I+FSDIL ALG + V+ +GP + T + + ++ + LP
Sbjct: 100 VDGVIMFSDILTPLPALGVDFDVVKGKGPLITD-TLGDAKRIAAFVEACGGFDPGAQLPF 158
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ LRK+ +L+GF GAPWT+ +Y GG + + + + + LD
Sbjct: 159 VGETLRNLRKETEGKTSLVGFVGAPWTLCAYATEGGASRHALKIKALMHDEPALAHAALD 218
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D A Y I QI G ++Q+F++ A L +F ++ R+ +AVR +P
Sbjct: 219 AMADAVAAYAIHQIDEGAQMVQVFESWAHQLNPADFAAFSKPYALRVAAAVREAHPGVPV 278
Query: 243 ISFAKGAGYMLKNYRRLTDS---NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
+ FA G L R + +A+ LDW+V ++ A +L PVQGN+DP L+
Sbjct: 279 LFFANGGSSYLGLQRDMAGDAHYSALSLDWAVDMADARAQLGPSVPVQGNVDPSLLLGSV 338
Query: 299 QVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V +D G G I NLGHG+ NV V R
Sbjct: 339 ADIDDAVKKCIDGAGGPGKHILNLGHGVLQPTPEANVAAFVDAAR 383
>gi|294675183|ref|YP_003575799.1| uroporphyrinogen decarboxylase [Prevotella ruminicola 23]
gi|294474031|gb|ADE83420.1| uroporphyrinogen decarboxylase [Prevotella ruminicola 23]
Length = 341
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGR LP YRQ+ K M Y E+TL PI DAAILFSDILV
Sbjct: 18 PPVWMMRQAGRVLPRYRQLTKMLPFRTIMSYA-NLAAEVTLMPIDDMGMDAAILFSDILV 76
Query: 80 IADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
I +ALG V + NEGP P ++ + ++L + ++ + +
Sbjct: 77 IPEALGVKVEWT-NEGPAF-PHPLMDVEHPAAELSFSPSHLNHVADTLDEIMGQKRADTP 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRV-FAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
+IGFCG P T YM+ G + V + Y + LLD ++ S Y+ Q
Sbjct: 135 VIGFCGGPLTCLCYMLGGRDKTMQFTDVVRYLYTHREESLQLLDAITSASETYVHLQAAH 194
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G+D QIF++ AG + +++ V RI +AVR+ I F KG G L+
Sbjct: 195 GIDTFQIFESFAGVISAELYQDMIMPFVRRITAAVRQH--GLPIIFFPKGFGAGLQMLTP 252
Query: 259 LTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP- 316
D + + +DW PL A L +QGN+DP L V+ + L P
Sbjct: 253 -EDCDFVSIDWQTPLLVARHLVNPAIGIQGNMDPRILFAPQAVIEQHLQQYLAFFREHPN 311
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+IFNLGHG+ +NV + + R +
Sbjct: 312 YIFNLGHGVHKDTPLENVQFVTEWFRQAQ 340
>gi|301167274|emb|CBW26856.1| uroporphyrinogen decarboxylase [Bacteriovorax marinus SJ]
Length = 345
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 167/335 (49%), Gaps = 22/335 (6%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRY Y+ I+K +F+ MC TP E+T PI + FDAAILFSD+L
Sbjct: 17 PVWFMRQAGRYHSHYQNIKKN-SDFMTMCKTPALANEITHGPIDDFKFDAAILFSDLLFP 75
Query: 81 ADALGRNVRFVENEGP----RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN 136
+ +G + V N GP R++ + + L + F N+ ++ ++LR L
Sbjct: 76 LEQMG--MGLVYNPGPILDKRINTLDDLKQLELKASAREFYNFQK---EACTLLRSSLDK 130
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
TL+GF GAP+T+ SY + G + +++ Y F+ L+ L E + Q
Sbjct: 131 SKTLLGFVGAPFTLYSYAVEGSHAGNLTSSKLGLYDGR--FHGFLEKLIPELVENMCIQA 188
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
G D + +FDT G L ++F+ Y ++ + A R ++P+ K I ++K ++
Sbjct: 189 EGGADAMCLFDTAVGELHFNDFKKYIIPALKSVTKAFRERHPDKKVIYYSKLT--HMEYL 246
Query: 257 RRLTDSN--AIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
R + D N +G+DW + LS AL EL + +QGN DP L + + + +N + L
Sbjct: 247 REIQDDNIDVLGIDWRMNLSNALSELGNDYYIQGNFDPSWLHLPWEHVESNLNEMWQGLQ 306
Query: 314 S-----GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I LGHG+ NV + V+ + +
Sbjct: 307 DKNLPLDKWICGLGHGVLQHTPESNVRNAVEYIHN 341
>gi|62185447|ref|YP_220232.1| uroporphyrinogen decarboxylase [Chlamydophila abortus S26/3]
gi|81312404|sp|Q5L510|DCUP_CHLAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|62148514|emb|CAH64285.1| putative uroporphyrinogen decarboxylase [Chlamydophila abortus
S26/3]
Length = 333
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 170/337 (50%), Gaps = 21/337 (6%)
Query: 15 NVINP----PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
+VI P PP+W +RQ GRY+P+YR+++ + D + E E TL DA
Sbjct: 6 DVIKPKASRPPVWFLRQVGRYMPQYRELKGS-QTLKDFFHNTEAITEATLLGPSLLKVDA 64
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISIL 130
AILF+DIL + D G N+ + GP++ +E+ N D F +YLL ++I L
Sbjct: 65 AILFADILSLLD--GFNISYDFAPGPQISFSPKEELIFTNDPQDTF-SYLL---KAIKNL 118
Query: 131 RKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE 190
K+L + LI F +P+T+A Y++ GG KD + F YQ+ F+ LL L++ +
Sbjct: 119 VKRL--SVPLIAFAASPFTMACYLLEGGASKDFPKTMAFLYQHPERFDALLKQLAEATVI 176
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
YL QI AG IQ+F++ + L F Y R ++I+ ++ ++ F +
Sbjct: 177 YLKEQIQAGASAIQLFESSSLRLPSALFSRYVTRPNTQLITQLKNSV-SSPISLFCRCFD 235
Query: 251 YMLKNYRRL--TDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
+N+ L T ++ + D+ V LS + G +QGN+DP ++ ++ +
Sbjct: 236 ---ENFIDLYSTGADTLHPDYHVNLSQIYTAVTHPGSLQGNIDPALFLLPQDQFLNHLEK 292
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L VL P +IFN GHGI P+ +NV V + S
Sbjct: 293 YLSVLKHQPKYIFNSGHGILPETPLENVQAAVLCLTS 329
>gi|15605480|ref|NP_220266.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis D/UW-3/CX]
gi|76789488|ref|YP_328574.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis A/HAR-13]
gi|166154089|ref|YP_001654207.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 434/Bu]
gi|166154964|ref|YP_001653219.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803177|ref|YP_002888371.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/Jali20/OT]
gi|237805098|ref|YP_002889252.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311579|ref|ZP_05354149.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 6276]
gi|255317880|ref|ZP_05359126.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 6276s]
gi|301335294|ref|ZP_07223538.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis L2tet1]
gi|8928065|sp|O84752|DCUP_CHLTR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123606617|sp|Q3KKU6|DCUP_CHLTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058016|sp|B0B8X3|DCUP_CHLT2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058018|sp|B0BAK2|DCUP_CHLTB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3329207|gb|AAC68342.1| Uroporphyrinogen Decarboxylase [Chlamydia trachomatis D/UW-3/CX]
gi|76168018|gb|AAX51026.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis A/HAR-13]
gi|165930077|emb|CAP03560.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 434/Bu]
gi|165930952|emb|CAP06514.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273398|emb|CAX10313.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274411|emb|CAX11206.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/Jali20/OT]
gi|296436294|gb|ADH18468.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/9768]
gi|296437223|gb|ADH19393.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/11222]
gi|297140654|gb|ADH97412.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/9301]
gi|297748877|gb|ADI51423.1| Uroporphyrinogen decarboxylase [Chlamydia trachomatis D-EC]
gi|297749757|gb|ADI52435.1| Uroporphyrinogen decarboxylase [Chlamydia trachomatis D-LC]
Length = 336
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 37/338 (10%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PPIW +RQ GRY+P+Y+++++ ++ D E VE TL DAAI+F+DIL
Sbjct: 18 PPIWFLRQVGRYIPQYQELKRN-RSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADILS 76
Query: 80 IADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
I + + RF GP + + E + + ++LL ++I L K+L +
Sbjct: 77 ILEGFSVDYRFAP--GPEVS-YSPHEPLIFTKDPQETFSFLL---EAIQQLTKRL--TVP 128
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LI F +P+T+ASY+I GG +D+ + F YQ F LLD ++ +A YL Q+ AG
Sbjct: 129 LIAFAASPFTLASYLIEGGASRDYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQAG 188
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG------YML 253
IQ+F++ + L H F Y PN K I K G +
Sbjct: 189 AAAIQLFESSSLRLPPHLFAKYVVA-------------PNTKLIRQIKQTGNPPISLFCR 235
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALEL-------QKEGPVQGNLDPMRLVVGNQVMIDGVN 306
Y+ AIG D P + +EL G +QGN DP L++ +I +
Sbjct: 236 CFYQEFLSLYAIGADTLHP-DYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLE 294
Query: 307 AILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A L L +IFNLGHGI PQ +NV +V + S
Sbjct: 295 AYLAPLKQQSHYIFNLGHGILPQTPIENVQAVVSCLTS 332
>gi|296438153|gb|ADH20314.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/11074]
Length = 334
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 160/338 (47%), Gaps = 37/338 (10%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PPIW +RQ GRY+P+Y+++++ ++ D E VE TL DAAI+F+DIL
Sbjct: 16 PPIWFLRQVGRYIPQYQELKRN-RSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADILS 74
Query: 80 IADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
I + + RF GP + + E + + ++LL ++I L K+L +
Sbjct: 75 ILEGFSVDYRFAP--GPEVS-YSPHEPLIFTKDPQETFSFLL---EAIQQLTKRL--TVP 126
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LI F +P+T+ASY+I GG +D+ + F YQ F LLD ++ +A YL Q+ AG
Sbjct: 127 LIAFAASPFTLASYLIEGGASRDYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQAG 186
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG------YML 253
IQ+F++ + L H F Y PN K I K G +
Sbjct: 187 AAAIQLFESSSLRLPPHLFAKYVVA-------------PNTKLIRQIKQTGNPPISLFCR 233
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALEL-------QKEGPVQGNLDPMRLVVGNQVMIDGVN 306
Y+ AIG D P + +EL G +QGN DP L++ +I +
Sbjct: 234 CFYQEFLSLYAIGADTLHP-DYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLE 292
Query: 307 AILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A L L +IFNLGHGI PQ +NV +V + S
Sbjct: 293 AYLAPLKQQSHYIFNLGHGILPQTPIENVQAVVSCLTS 330
>gi|261885409|ref|ZP_06009448.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 210
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 113/185 (61%), Gaps = 2/185 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW+MRQAGRYLPEY +R +FL +C + E+TLQP+ DAAI+FSDILV+
Sbjct: 16 PIWMMRQAGRYLPEYMAVRDAAGDFLSLCKDYKKASEVTLQPVDILGVDAAIMFSDILVV 75
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G ++F++ EGP + PI + + L +++ + L ++ +I + R+KL +
Sbjct: 76 PLEMGMELKFIKGEGPVFENPILSMD-SLDKLSVEKAVKNLSYVYDTIKLTREKLSSDKA 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGFCGAPW++A+YMI GG K + ++ Y N + + +L ++ YL QI AG
Sbjct: 135 LIGFCGAPWSIATYMIEGGSTKTYNISKKMLYDNPQFLHAILRKVTKAIKLYLEEQIKAG 194
Query: 200 VDVIQ 204
V+ +Q
Sbjct: 195 VNAVQ 199
>gi|15618799|ref|NP_225085.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae CWL029]
gi|15836423|ref|NP_300947.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae J138]
gi|16752146|ref|NP_445513.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae AR39]
gi|33242252|ref|NP_877193.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae TW-183]
gi|8928080|sp|Q9Z716|DCUP_CHLPN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|4377209|gb|AAD19028.1| Uroporphyrinogen Decarboxylase [Chlamydophila pneumoniae CWL029]
gi|7189889|gb|AAF38756.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae AR39]
gi|8979264|dbj|BAA99098.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae J138]
gi|33236763|gb|AAP98850.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae TW-183]
Length = 329
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 172/342 (50%), Gaps = 24/342 (7%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L+ + PPIWL+RQ GRY+P Y++++ + K F + E VE TL
Sbjct: 5 FDLLKSQTASHPPIWLLRQVGRYMPPYQELKGSQSLKTFF---HNTEAIVEATLLGPSLL 61
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
+ DAAILF+DIL I D F GPR+ + ++ + + +YLL +
Sbjct: 62 HVDAAILFADILSILDGFAVTYDFAP--GPRIQ-FSPEQPFTFTSDPQTIFSYLL---DA 115
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I L++KLP + LI F +P+T+A Y+I GG KD + F Y F+ L+ + +
Sbjct: 116 IRTLKQKLP--VPLIVFAASPFTLACYLIDGGASKDFSKTMSFLYVYPEKFDQLISTIIE 173
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-YPNAKFISF 245
+A YL Q+ AG +Q+F++ + L F Y R+I+ ++ + P + F
Sbjct: 174 GTAIYLKTQMDAGAAAVQLFESSSLRLPSALFTRYVTEPNRRLIAKLKEQAIPVSLFCRC 233
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDPMRLVVGNQVMID 303
+ Y L+ T ++ + D+ V L +QK +QGNLDP ++ + ++
Sbjct: 234 FEENFYTLQA----TQADTLHPDYHVDLH---RIQKNLMLSLQGNLDPAIFLLPQEKLLH 286
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V A L L + P FIFN GHGI P+ +NV +V V+ +
Sbjct: 287 YVEAFLVPLRTYPNFIFNSGHGILPETPLENVQLVVSYVQRQ 328
>gi|269302678|gb|ACZ32778.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae LPCoLN]
Length = 329
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 171/342 (50%), Gaps = 24/342 (7%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L+ + PPIWL+RQ GRY+P Y++++ + K F + E VE TL
Sbjct: 5 FDLLKSQTASHPPIWLLRQVGRYMPPYQELKGSQSLKTFF---HNTEAIVEATLLGPSLL 61
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
+ DAAILF+DIL I D F GPR+ ++ + + +YLL +
Sbjct: 62 HVDAAILFADILSILDGFAVTYDFAP--GPRIQ-FFPEQPFTFTSDPQTIFSYLL---DA 115
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I L++KLP + LI F +P+T+A Y+I GG KD + F Y F+ L+ + +
Sbjct: 116 IRTLKQKLP--VPLIVFAASPFTLACYLIDGGASKDFSKTMSFLYAYPEKFDQLISTIIE 173
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-YPNAKFISF 245
+A YL Q+ AG +Q+F++ + L F Y R+I+ ++ + P + F
Sbjct: 174 GTAIYLKTQMDAGAAAVQLFESSSLRLPSALFTRYVTEPNRRLIAKLKEQAIPVSLFCRC 233
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDPMRLVVGNQVMID 303
+ Y L+ T ++ + D+ V L +QK +QGNLDP ++ + ++
Sbjct: 234 FEENFYTLQA----TQADTLHPDYHVDLH---RIQKNLMPSLQGNLDPAIFLLPQEKLLH 286
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V A L L + P FIFN GHGI P+ +NV +V V+ +
Sbjct: 287 YVEAFLVPLRTYPNFIFNSGHGILPETPLENVQLVVSYVQRQ 328
>gi|302537556|ref|ZP_07289898.1| uroporphyrinogen decarboxylase [Streptomyces sp. C]
gi|302446451|gb|EFL18267.1| uroporphyrinogen decarboxylase [Streptomyces sp. C]
Length = 290
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 7/234 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR++R+ L+ C P+ E+T+QP+RR++ DAAI FSDI+V
Sbjct: 63 PVWFMRQAGRSLPEYRKVREG-TAMLESCMRPDLVTEITMQPVRRHDVDAAIFFSDIVVP 121
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G ++ GP + PI +E L DL + + ++I +L +L
Sbjct: 122 LKAIGVDLDIKPGIGPVVAQPIRRRED--LAQLRDLTPEDVAYVTEAIGMLTGEL-GGTP 178
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASY++ GG K+H + Y + + + LLD L+++++ +L QI AG
Sbjct: 179 LIGFAGAPFTLASYLVEGGPSKNHEHTKALMYGDPQLWAELLDRLAEITSAFLKVQIEAG 238
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
+Q+FD+ G L ++ + +++ +V I F G G +L
Sbjct: 239 ASAVQLFDSWVGALAPADYRRSVMPASAKVLESVASY--GVPRIHFGVGTGELL 290
>gi|298243811|ref|ZP_06967618.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
gi|297556865|gb|EFH90729.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
Length = 357
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 155/310 (50%), Gaps = 12/310 (3%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAG YR++ +K+ + L + TPE + ++ L P++ DAA+LF+DI++
Sbjct: 33 PVWFMRQAGSTFGAYRKMLEKY-DVLTIAKTPELSSQVALFPVQELGVDAAVLFADIMLP 91
Query: 81 ADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ +G + GP + PI + L P D + + I +L ++L
Sbjct: 92 IEDMGVELHLEPEVGPIIHHPIRDIQAVEALRTPARDEVTPF---VMDGIRLLHRELEGK 148
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+IG GAP+T+A Y+I G +D+ + Y ++ L++ +S V A+YL+AQ+
Sbjct: 149 QAVIGIAGAPFTLACYLIEGRPSRDYHHAKTMMYSRPDLWHALMEKISTVIADYLVAQVQ 208
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG +V+Q+FD+ G L + + R+ AV K A I F G +L N
Sbjct: 209 AGANVVQVFDSWVGSLSPSVYRTFVLPYTQRVFQAV--KATGAPAIHFGTGTASLL-NVM 265
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
+ + +DW + L A E + E +QGNLDP ++ V+ + + +L + P
Sbjct: 266 TEAGGDVMSIDWRMDLDTAWERIGYERGIQGNLDPALMLTSWPVIEENMRDVLRRAANRP 325
Query: 317 -FIFNLGHGI 325
IFN GH +
Sbjct: 326 GHIFNFGHAM 335
>gi|255349142|ref|ZP_05381149.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 70]
gi|255503679|ref|ZP_05382069.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 70s]
gi|255507359|ref|ZP_05382998.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis D(s)2923]
gi|289525791|emb|CBJ15272.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis Sweden2]
gi|296435367|gb|ADH17545.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis E/150]
gi|296439084|gb|ADH21237.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis E/11023]
Length = 336
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 159/338 (47%), Gaps = 37/338 (10%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PPIW +RQ GRY+P+Y+++++ ++ D E VE TL DAAI+F+DIL
Sbjct: 18 PPIWFLRQVGRYIPQYQELKRN-RSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADILS 76
Query: 80 IADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
I + + RF GP + + E + + ++LL ++I L K+L +
Sbjct: 77 ILEGFSVDYRFAP--GPEVS-YSPHEPLIFTKDPQETFSFLL---EAIQQLTKRL--TVP 128
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LI F +P+T+ASY+I GG + + + F YQ F LLD ++ +A YL Q+ AG
Sbjct: 129 LIAFAASPFTLASYLIEGGASRGYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQAG 188
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG------YML 253
IQ+F++ + L H F Y PN K I K G +
Sbjct: 189 AAAIQLFESSSLRLPPHLFAKYVVA-------------PNTKLIRQIKQTGNPPISLFCR 235
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALEL-------QKEGPVQGNLDPMRLVVGNQVMIDGVN 306
Y+ AIG D P + +EL G +QGN DP L++ +I +
Sbjct: 236 CFYQEFLSLYAIGADTLHP-DYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLE 294
Query: 307 AILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A L L +IFNLGHGI PQ +NV +V + S
Sbjct: 295 AYLAPLKQQSHYIFNLGHGILPQTPIENVQAVVSCLTS 332
>gi|73977144|ref|XP_861870.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 4 [Canis familiaris]
Length = 313
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 150/323 (46%), Gaps = 53/323 (16%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+RR+ DAAI+FSDILV+
Sbjct: 32 PVWCMRQAGRYLPEFKETRAA-QDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVV 90
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
ALG V V +GP +P+ + + + L +FQ+I++ R++L +
Sbjct: 91 PQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGYVFQAITLTRQRLAGRVP 150
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP A Q + + HAG
Sbjct: 151 LIGFAGAP----------------------ALQ--------------------LFESHAG 168
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
Q+F+ A + A R R+ A P I FAK + L+ +
Sbjct: 169 HLGPQLFNKFALPY----VRDVAKRVKARVQEAGLAPVP---MIIFAKDGHFALEELAQ- 220
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+GLDW+V A E + K +QGNLDP L + + V +LD G +I
Sbjct: 221 AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEIGRLVQKMLDDFGPQRYI 280
Query: 319 FNLGHGITPQVDPKNVLDLVKTV 341
NLGHG+ P +DP++V V V
Sbjct: 281 ANLGHGLYPDMDPEHVGAFVDAV 303
>gi|307104819|gb|EFN53071.1| hypothetical protein CHLNCDRAFT_32323 [Chlorella variabilis]
Length = 396
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 21/348 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L+G + PP+W+MRQAGRY+ Y+++ KK F + + VE++LQP R +
Sbjct: 53 LLRALRGEEVERPPVWMMRQAGRYMKVYQELCKKHTTFRERSENADIAVEVSLQPWRAFQ 112
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQ 125
D ILFSDIL + + +GP + DPI T E ++ L +P + Q
Sbjct: 113 PDGVILFSDILTPIAGMNIPFDIDKGKGPVIADPIRTMEA--VDRVTPLVPEDCVPFVGQ 170
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ LR ++ T++GF GAP+T+A+Y++ GG K++ Q + + + LL L+
Sbjct: 171 ALRRLRAEVGGASTVLGFVGAPFTLATYIVEGGMSKNYVQIKKLMFTEPEVLHALLQKLA 230
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D Y+ Q G V+QIFD+ A L +F+ + + II+ +++ P+ I +
Sbjct: 231 DAVVTYIKYQHDNGAQVVQIFDSWAAQLSPQDFDIWCGPYIKYIIAEAKKQCPDLPIILY 290
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG---PVQGNLDPMRLVVGNQVMI 302
+G +++ R+ N + + +++ G QGN+D ++ G+ MI
Sbjct: 291 ISNSGALVE---RMAACNPDIISLCHTVDMKEGIRRAGTQFAYQGNMDS-GVLFGSHDMI 346
Query: 303 DGVNAILDVLGSGP-----FIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ + + + I NLGHGI TP+ + + + K +R
Sbjct: 347 E--QRVRETAKAAKEMGVRHIMNLGHGIMQGTPEENAAHFFKVAKELR 392
>gi|221116841|ref|XP_002154197.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Hydra
magnipapillata]
Length = 552
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 5/237 (2%)
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
LLN ++D+ + L + +I++ RK L LIGF GAPWT+ +YMI GG K + + +
Sbjct: 311 LLNVDVDVKIE-LKYVLDAITLTRKTLDGKCPLIGFAGAPWTLMAYMIEGGGSKTYSKVK 369
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVG 227
Y + + LL+ L+ V ++L+ Q+ AG ++Q+FD+HAG L F + +
Sbjct: 370 KCLYVDPDSCKNLLNILTRVCIDFLVEQVKAGAQILQVFDSHAGELSADMFNIFCLPYLK 429
Query: 228 RIISAVRRKY-PNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
I ++V++ PN I FAKG+ Y LK+ +D + I LDW++ + A L
Sbjct: 430 DIATSVKKVLGPNQSVPMIIFAKGSHYALKDLGE-SDYDVIALDWTMNIEDARRLCPHKT 488
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ GNLDP L + + V ++ + G+ +I NLGHGI P VDP ++ V V
Sbjct: 489 LMGNLDPCALYSSKEDIDTRVKKMVQMFGTSKYIANLGHGIYPDVDPDHMEAFVNAV 545
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
IL+ +G ++ P+W+MRQAGRYLPE+R +R + F D+C TP E+T+ PIR+Y+
Sbjct: 16 ILKATRGENVSRVPVWVMRQAGRYLPEFRNLRVE-NEFFDVCRTPSLACEVTMMPIRKYD 74
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGP 96
DAAI+FSDILVI ALG V + +GP
Sbjct: 75 LDAAIIFSDILVIPQALGMQVEMQKGKGP 103
>gi|329943214|ref|ZP_08291988.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci Cal10]
gi|313848366|emb|CBY17370.1| putative uroporphyrinogen decarboxylase [Chlamydophila psittaci
RD1]
gi|328814761|gb|EGF84751.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci Cal10]
gi|328915052|gb|AEB55885.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
Length = 333
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 172/339 (50%), Gaps = 25/339 (7%)
Query: 15 NVINP----PPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+VI P PP+W +RQ GRY+P+YR+++ + K F + + E TL
Sbjct: 6 DVIKPQASRPPVWFLRQVGRYMPQYRELKGSQTLKAFF---HNTDAITEATLLGPSLLKV 62
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILF+DIL + D G N+ + GP++ +E+ D F +YLL ++I
Sbjct: 63 DAAILFADILSLLD--GFNISYDFAPGPQISFSPEEELVFTKDPQDTF-SYLL---EAIK 116
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
L K+L + LI F +P+T+A Y++ GG KD + F YQ+ + F+ LL L++ +
Sbjct: 117 NLVKRL--SVPLIAFAASPFTMACYLLDGGASKDFPRTMAFLYQHPKRFDALLKQLAEGT 174
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL QIHAG IQ+F++ + L F Y ++I+ ++ + ++ F +
Sbjct: 175 VIYLKEQIHAGASAIQLFESSSLRLPSALFSRYVTLPNTQLIAQLKN-HVSSPISLFCRC 233
Query: 249 AGYMLKNYRRL--TDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+N+ L T ++ + D+ V LS + G +QGN+DP ++ ++ +
Sbjct: 234 FD---ENFIDLYSTGADTLHPDYHVNLSKIYTSVTDPGSLQGNIDPALFLLPQDQFLNHL 290
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
L VL P +IFN GHGI P+ +NV V + S
Sbjct: 291 EKYLSVLKHQPKYIFNSGHGILPETPLENVQAAVLCLTS 329
>gi|89897945|ref|YP_515055.1| uroporphyrinogen decarboxylase [Chlamydophila felis Fe/C-56]
gi|89331317|dbj|BAE80910.1| uroporphyrinogen decarboxylase [Chlamydophila felis Fe/C-56]
Length = 333
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 41/347 (11%)
Query: 15 NVINP----PPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
++I P PP+W +RQ GRY+P+YR+++ + K F + E E TL
Sbjct: 6 DIIKPEAQRPPVWFLRQVGRYMPQYRELKGSQTLKAFF---HNTEAITEATLLGPSLLKV 62
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILF+DIL + D G ++ + GP++ +E+ D F +YLL +SI
Sbjct: 63 DAAILFADILSLLD--GFDIPYDFAPGPKISFSPQEELRFTKDPQDTF-SYLL---ESIR 116
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
L K+L + LI F +P+T+ASY++ GG KD + F YQ+ F+ LL+ L + +
Sbjct: 117 NLVKRL--SVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQHPEKFDALLNKLIEGT 174
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAKFIS-- 244
YL QIHAG IQ+F++ + L F +Y R+IS +++ P + F
Sbjct: 175 IIYLKEQIHAGASAIQLFESSSLRLPSALFSHYVTSPNARLISQLKQHVSAPVSLFCRCF 234
Query: 245 -------FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+A GA + +Y + N I P G +QGN+DP ++
Sbjct: 235 DENCLDLYATGADTLHPDYH--VNLNKIYTTVPYP----------GSLQGNIDPALFLLP 282
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + L L P +IFN GHGI P+ +NV V + S
Sbjct: 283 QDRFLSYLEKYLSSLKHQPNYIFNTGHGILPETPLENVQAAVLCLTS 329
>gi|73977142|ref|XP_861837.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 3 [Canis familiaris]
Length = 272
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 119/225 (52%), Gaps = 7/225 (3%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 39 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 98
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG +Q+F++HAG LG F +A V + V+ + A
Sbjct: 99 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGL 158
Query: 243 -----ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 159 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 217
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 218 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAV 262
>gi|308125692|ref|ZP_07663482.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
gi|308115542|gb|EFO53082.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
Length = 191
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 10/173 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPNIDLFLN 118
RR+ DAAILFSDIL I DA+G +RF EGP D PIT ++I L +P + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE--LQ 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
Y + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 123 Y---VMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMY 172
>gi|301335325|ref|ZP_07223569.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis L2tet1]
gi|301336311|ref|ZP_07224513.1| uroporphyrinogen decarboxylase [Chlamydia muridarum MopnTet14]
Length = 339
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 165/331 (49%), Gaps = 23/331 (6%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKF---KNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
PP+WL+RQ GRY+P+Y++++K + FLD E VE +L DAAI+F+D
Sbjct: 21 PPVWLLRQVGRYMPQYQELKKNRPLKEVFLDT----ESIVEASLLGPSLLGVDAAIVFAD 76
Query: 77 ILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN 136
IL I + +F GP + Q + + +F ++LL ++I +L K+L
Sbjct: 77 ILSILEGFAVEYQFAP--GPEIVYSPQQPLVFTKEPLAVF-SFLL---EAIQLLTKRL-- 128
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
+ LI F +P+T+ASY++ GG KD + F Y+ F LLD + +A YL Q+
Sbjct: 129 TVPLIAFAASPFTLASYLLEGGAAKDCSKTMAFLYRYPDRFQTLLDEIIKGTAVYLQLQV 188
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
AG +Q+F++ + L F Y ++I +++ N F + + +
Sbjct: 189 QAGATAVQLFESSSLRLPPSLFSQYVVTPNTKLIRQIKQDR-NPPISLFCRC---FYQEF 244
Query: 257 RRL--TDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
L T ++ + D+ V L +L G +QGN DP L++ ++I + A L L
Sbjct: 245 LSLYATGADTLHPDYHVELPEVYRQLGNPGSIQGNFDPAFLLLPQDMLIKHLEAYLAPLK 304
Query: 314 S-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+IFNLGHGI PQ +NV +V + S
Sbjct: 305 EQSHYIFNLGHGILPQTPLENVQAVVSCLTS 335
>gi|331665652|ref|ZP_08366548.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
gi|331057170|gb|EGI29162.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
Length = 183
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 100/165 (60%), Gaps = 7/165 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
L Y + ++ +R++L + LIGF G+PWT+A+YM+ GG K
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSK 162
>gi|330938623|gb|EGH42190.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 252
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P+ L Y + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++
Sbjct: 13 PDAQQDLGY---VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAML 69
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y N +A + LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+
Sbjct: 70 YDNPQAMHLLLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIV 129
Query: 231 SAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQG 287
+ + R+ K I F KG G L++ + ++ +GLDW+ + A + + + +QG
Sbjct: 130 NRLIRENDGRKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQG 188
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
N+DP L + + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 189 NMDPTVLYARPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAV 243
>gi|215412486|ref|ZP_03421220.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis
94_M4241A]
Length = 176
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 7/181 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVPLRAA 59
Query: 85 GRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
G ++ V + GP + DP+ T ++ + P L + P+ + S+L +L + LIG
Sbjct: 60 GVDLDIVADVGPVIADPVRTAADVAAMKP---LDPQAIQPVLVAASLLVAEL-GDVPLIG 115
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI AGVD
Sbjct: 116 FAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDA 175
Query: 203 I 203
I
Sbjct: 176 I 176
>gi|29840635|ref|NP_829741.1| uroporphyrinogen decarboxylase [Chlamydophila caviae GPIC]
gi|38257421|sp|Q821R0|DCUP_CHLCV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29834985|gb|AAP05619.1| uroporphyrinogen decarboxylase [Chlamydophila caviae GPIC]
Length = 333
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 165/344 (47%), Gaps = 35/344 (10%)
Query: 15 NVINP----PPIWLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+VI P PP+W +RQ GRY+P+Y++++ + K F + E E TL
Sbjct: 6 DVIKPKTARPPVWFLRQVGRYMPQYKELKGSQTLKAFF---HNTEAITEATLLGPSLLKV 62
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILF+DIL + D G N+ + + GP++ +E+ + F +YLL Q+I
Sbjct: 63 DAAILFADILSLLD--GFNISYDFSPGPQISFSPYEELIFTKDPQETF-SYLL---QAIK 116
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
L K L + LI F +P+T+ASY++ GG KD + F YQ F+ LL L++ +
Sbjct: 117 NLVKAL--DVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQYPDKFDALLKKLTEGT 174
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL QIHAG IQ+F++ + L F Y ++IS +++ A
Sbjct: 175 VIYLKEQIHAGAAAIQLFESSSLRLPSELFSRYVTAPNTQLISQLKQ--------CIASP 226
Query: 249 AGYMLKNY-RRLTDSNAIGLDWSVPLSFALELQK-------EGPVQGNLDPMRLVVGNQV 300
+ + D +IG D P + + L K G +QGN+DP ++
Sbjct: 227 ISLFCRCFDENFLDLYSIGADTLHP-DYHVNLNKIYKTVPQPGSLQGNIDPTLFLLPQDQ 285
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ + L L P +IFN GHGI P+ +NV V + S
Sbjct: 286 LLAHLEKYLTTLKDQPNYIFNSGHGILPETPLENVQAAVLCLTS 329
>gi|76154669|gb|AAX26107.2| SJCHGC03658 protein [Schistosoma japonicum]
Length = 161
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 8/165 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R +R+K +F ++C TPE +TLQPI R++ DAAI+FSDILVI AL
Sbjct: 1 MRQAGRYLPEFRALREK-HDFFEICRTPELACTVTLQPIYRFDLDAAIIFSDILVIPQAL 59
Query: 85 GRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHITL 140
G V+ GP+ +P+ + +++ LN N+D+ LNY +++SI++ R +L + L
Sbjct: 60 GMEVKMQPGVGPKFTEPLNSIKDLDRLNANVDVRKELNY---VYESITLTRHRLEGKVPL 116
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
IGF GAPWT+ SYM+ GG + + + + Y + ++ LL+ L+
Sbjct: 117 IGFSGAPWTLMSYMVEGGSSNTYSRAKRWLYNDPQSSQKLLNLLT 161
>gi|332749193|gb|EGJ79615.1| uroporphyrinogen decarboxylase family protein [Shigella flexneri
2747-71]
Length = 169
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
L Y + ++ +R +L + LIGF G+PWT+A+YM+ GG K
Sbjct: 121 LGY---VMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSK 162
>gi|116110648|gb|ABJ74703.1| Updo [Drosophila affinis]
Length = 254
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 128/237 (54%), Gaps = 11/237 (4%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYL 120
+RR++ DA+I+FSDILVI ALG V GP + PI T +++ L P D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKRLTP--DGALSRL 58
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + +
Sbjct: 59 TYVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLADHPEDTRLF 118
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RR 235
L+ L+D +YL Q+ AG ++Q+F++ A L + EF +A + RI + ++
Sbjct: 119 LNLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEEFLIWAVPYLRRIRDELVDRLTKK 178
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
P FAKGAG+ LK L + IGLDW+V P+ ++ +QGNLDP
Sbjct: 179 AVPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAQVGPNITLQGNLDP 234
>gi|116110688|gb|ABJ74723.1| Updo [Drosophila miranda]
gi|116110690|gb|ABJ74724.1| Updo [Drosophila miranda]
gi|116110692|gb|ABJ74725.1| Updo [Drosophila miranda]
gi|116110694|gb|ABJ74726.1| Updo [Drosophila miranda]
gi|116110696|gb|ABJ74727.1| Updo [Drosophila miranda]
gi|116110698|gb|ABJ74728.1| Updo [Drosophila miranda]
gi|116110700|gb|ABJ74729.1| Updo [Drosophila miranda]
gi|116110702|gb|ABJ74730.1| Updo [Drosophila miranda]
gi|116110704|gb|ABJ74731.1| Updo [Drosophila miranda]
gi|116110706|gb|ABJ74732.1| Updo [Drosophila miranda]
gi|116110708|gb|ABJ74733.1| Updo [Drosophila miranda]
gi|116110710|gb|ABJ74734.1| Updo [Drosophila miranda]
gi|116110712|gb|ABJ74735.1| Updo [Drosophila miranda]
gi|116110714|gb|ABJ74736.1| Updo [Drosophila miranda]
gi|116110716|gb|ABJ74737.1| Updo [Drosophila miranda]
gi|116110718|gb|ABJ74738.1| Updo [Drosophila miranda]
gi|116110720|gb|ABJ74739.1| Updo [Drosophila miranda]
gi|116110722|gb|ABJ74740.1| Updo [Drosophila miranda]
Length = 254
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYL 120
+RR++ DA+I+FSDILVI ALG V GP + PI T +++ LL P D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKLLTP--DGALSRL 58
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + +
Sbjct: 59 TYVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLF 118
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RR 235
L+ L+D +YL Q+ AG ++Q+F++ A L + F +A + RI + ++
Sbjct: 119 LNLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEHFLLWAVPYLRRIRDELVDRLTKK 178
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
P FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP
Sbjct: 179 AVPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDP 234
>gi|15834747|ref|NP_296506.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
gi|270284914|ref|ZP_06194308.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
gi|270288941|ref|ZP_06195243.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Weiss]
gi|13878473|sp|Q9PLH7|DCUP_CHLMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7190158|gb|AAF39001.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
Length = 334
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 28/341 (8%)
Query: 15 NVINP-----PPIWLMRQAGRYLPEYRQIR--KKFKN-FLDMCYTPEYTVELTLQPIRRY 66
++I+P PP+WL+RQ GRY+P+Y++++ + K FLD E +E TL
Sbjct: 6 DIISPSNQHRPPVWLLRQVGRYMPQYQELKTNRPLKELFLDT----ESIIEATLLGPSLL 61
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+F+DIL I + RF GP + Q F ++L+ ++
Sbjct: 62 GVDAAIVFTDILSILEGFAIEYRFAP--GPEIIYSPHQPFVFTEDPFSTF-SFLI---EA 115
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I L K+L + LI F +P+T+ASY+I GG KD + F YQ F LL+ +
Sbjct: 116 IQKLTKRL--TVPLIAFAASPFTLASYLIEGGASKDCSKTIAFLYQYPDKFEALLNEIIK 173
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+A YL Q+ AG +Q+F++ + L F Y ++I ++++ N F
Sbjct: 174 GTAIYLQLQVQAGASAVQLFESSSLRLPPSLFSKYVVSPNAKLIRLIKQR-ENPPVSLFC 232
Query: 247 KGAGYMLKNYRRL--TDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ + + L T ++ + D+ V LS +L G +QGN DP L++ ++I
Sbjct: 233 RC---FYQEFLSLYATGADTLHPDYHVELSEIYRQLGDPGSIQGNFDPALLLLPQDLLIA 289
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L L +IFNLGHGI PQ +NV +VK + S
Sbjct: 290 HLETYLAPLKQQSHYIFNLGHGILPQTPLENVQAVVKCLTS 330
>gi|116110650|gb|ABJ74704.1| Updo [Drosophila pseudoobscura]
gi|116110652|gb|ABJ74705.1| Updo [Drosophila miranda]
gi|116110654|gb|ABJ74706.1| Updo [Drosophila miranda]
gi|116110656|gb|ABJ74707.1| Updo [Drosophila miranda]
gi|116110658|gb|ABJ74708.1| Updo [Drosophila miranda]
gi|116110660|gb|ABJ74709.1| Updo [Drosophila miranda]
gi|116110662|gb|ABJ74710.1| Updo [Drosophila miranda]
gi|116110664|gb|ABJ74711.1| Updo [Drosophila miranda]
gi|116110666|gb|ABJ74712.1| Updo [Drosophila miranda]
gi|116110668|gb|ABJ74713.1| Updo [Drosophila miranda]
gi|116110670|gb|ABJ74714.1| Updo [Drosophila miranda]
gi|116110672|gb|ABJ74715.1| Updo [Drosophila miranda]
gi|116110674|gb|ABJ74716.1| Updo [Drosophila miranda]
gi|116110676|gb|ABJ74717.1| Updo [Drosophila miranda]
gi|116110678|gb|ABJ74718.1| Updo [Drosophila miranda]
gi|116110680|gb|ABJ74719.1| Updo [Drosophila miranda]
gi|116110682|gb|ABJ74720.1| Updo [Drosophila miranda]
gi|116110684|gb|ABJ74721.1| Updo [Drosophila miranda]
gi|116110686|gb|ABJ74722.1| Updo [Drosophila miranda]
Length = 254
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 11/237 (4%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYL 120
+RR++ DA+I+FSDILVI ALG V GP + PI T +++ L P D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKRLTP--DGALSRL 58
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + +
Sbjct: 59 TYVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLF 118
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RR 235
L+ L+D +YL Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 119 LNLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEDFLLWAVPYLRRIRDELVDRLTKK 178
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDP 291
P FAKGAG+ LK L + IGLDW+V P+ + +QGNLDP
Sbjct: 179 AVPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDP 234
>gi|45655597|ref|YP_003406.1| uroporphyrinogen decarboxylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294653591|ref|NP_714560.2| uroporphyrinogen decarboxylase [Leptospira interrogans serovar Lai
str. 56601]
gi|45602568|gb|AAS72043.1| uroporphyrinogen decarboxylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293630694|gb|AAN51575.2| uroporphyrinogen decarboxylase [Leptospira interrogans serovar Lai
str. 56601]
Length = 340
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 162/349 (46%), Gaps = 28/349 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ VL G PP+W+MRQAGRY Y+ +R K+ +F ++C P+ E+ P+
Sbjct: 4 ERYTNVLNGIAQKIPPVWMMRQAGRYHKHYQTLRTKY-SFEELCKNPDLAAEVAYGPVDE 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIF 124
++FD AILFSDIL +ALG +R+ ++ GP +D I ++E +++ ++++ F
Sbjct: 63 FDFDVAILFSDILFPLEALGMGLRYTDS-GPVLDLEIRSKEDLNKLKSVEDSISFMQ--F 119
Query: 125 QSISILR--KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
Q +I R +KLP +LIGF G PWT+ +Y + G H N + L+
Sbjct: 120 QKKAIQRTLEKLPKEKSLIGFVGGPWTLFTYAVCG----KHEGNLFLPKTLTEVRKEFLE 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ E + Q+ G ++I IFDT G L F I + YP K
Sbjct: 176 KIIQFLKENISIQLEGGAELILIFDTAGGDLSPELFREIVIPG----IKTLSDFYP-GKV 230
Query: 243 ISFAKGAGYM-LKNYRRLTDSNAIGLD--WSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
+ +G + + R +T G D W++ F E + +QGN D L +G +
Sbjct: 231 GYYGRGTSSIHFEMIREITTLAGFGFDHRWNLREIFKTESRM---IQGNFDQSLLFLGKE 287
Query: 300 VMIDGVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ L P ++ LGHG+ P+ NV V+ VR
Sbjct: 288 EFKKILMNYLKPFRELPPAERIGWVCGLGHGVMPKTPEYNVKTFVEIVR 336
>gi|183220563|ref|YP_001838559.1| uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910673|ref|YP_001962228.1| uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775349|gb|ABZ93650.1| Uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778985|gb|ABZ97283.1| Uroporphyrinogen decarboxylase (URO-D; UPD) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 347
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 45/361 (12%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
NER ++++ +V PPIW MRQAGRY YR++++ + +F+++C PE E+ L
Sbjct: 8 NERFANAIQLVPQDV---PPIWFMRQAGRYHSHYRKLKETY-SFMELCKEPELAAEVALG 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P++ + FD +ILFSD+L +ALG + + + GP++ + L D LN L
Sbjct: 64 PVKEFGFDVSILFSDLLFPLEALGMGLTY--DPGPKLS-------FSLTSITD--LNKLK 112
Query: 122 P--------IFQSISILRKK--LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
P +FQ +++R + LP ++LIGF G P+T+ +Y G H N F
Sbjct: 113 PVEEAIEGLVFQKQAVIRTREVLPKDVSLIGFVGGPFTLMTYASIG----KHDGNLSFIK 168
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
N + L + + + Q+ G +V+ +FDT AG L + F Y A I+
Sbjct: 169 TNQNFVDEFYTILLPLLKKNIELQLQGGAEVVMMFDTAAGMLDPNNFRRYVAEP----IA 224
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD--WSVPLSFALELQKEGPVQGNL 289
+ + +PN ++ ++ D G+D +S+P + E +G +QGN
Sbjct: 225 ELTKTFPNQIGYYAKNSTEEHIRQIHKIPDLVGFGVDHRFSIP-NVLHEFGGKGFIQGNF 283
Query: 290 DPMRLVVGNQVMIDGVNA-ILDVLGSGP-----FIFNLGHGI---TPQVDPKNVLDLVKT 340
D L + + +L + P ++ LGHG+ TP+ ++++ +
Sbjct: 284 DQELLFADPVTLKHKIKEYLLPIKDMDPKDRVGWVAGLGHGVLQFTPEASIHSLIEETRK 343
Query: 341 V 341
V
Sbjct: 344 V 344
>gi|42524807|ref|NP_970187.1| uroporphyrinogen decarboxylase [Bdellovibrio bacteriovorus HD100]
gi|39577017|emb|CAE78246.1| uroporphyrinogen decarboxylase [Bdellovibrio bacteriovorus HD100]
Length = 339
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 20/332 (6%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PPIW MRQAGRY Y+ +R +F +C E E+ P+ ++FD +ILFSDIL
Sbjct: 17 PPIWFMRQAGRYHKHYQGMRAN-HSFDQLCKRAELAAEVARGPVAEFDFDVSILFSDILY 75
Query: 80 IADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+ALG + + ++ GP++ T E ++ + ++ +++ R LP++ +
Sbjct: 76 PLEALGMGLEYTDH-GPQLGFKLTPETIGTLGGVEEAVKFMHFQKEAVQATRAVLPSNKS 134
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G PWT+ Y + G H + + + + + F L+ + + E + Q+ G
Sbjct: 135 LIGFVGGPWTLFVYAVEG----SHAGSLIQSKKLAPMFPQFLEKMYPLLKENIRLQLEGG 190
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN--YR 257
V+++ IFDT AG + F+ + + +++ + + YP K ++KG + N ++
Sbjct: 191 VEIVMIFDTAAGEVSPLFFQEW----IQPVLARLSQDYP-GKIGYYSKGTQAVFFNDAFK 245
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS--- 314
L + G D L +Q +G VQGN D L + ++ L + +
Sbjct: 246 ALPWAGQ-GFDHRNYLPDCFNIQNKGFVQGNFDQSLLFMDEADFKKAMHTYLAPMKNMSK 304
Query: 315 ---GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ LGHG+ P+ KNV V TVR
Sbjct: 305 EQRAGWVSGLGHGVLPKTPEKNVKLFVDTVRE 336
>gi|218192783|gb|EEC75210.1| hypothetical protein OsI_11473 [Oryza sativa Indica Group]
Length = 365
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 27/307 (8%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGR---------------------YLPEYRQIRKKFKNFL 46
++ ++G + PP+WLMRQAG + Y+ + ++ +F
Sbjct: 52 LVSAIKGRKVERPPVWLMRQAGSLFHGIQYLIASSSCLNRDKCPFFESYQLLCERHPSFR 111
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE 105
+ + VE++LQP + + D ILFSDIL + V+ +GP + DP+ T
Sbjct: 112 ERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAA 171
Query: 106 IYLLNPNIDLFLNYLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+N + +P + Q+++ILR+++ N ++GF GAP+T+ASY + GG K+
Sbjct: 172 A--VNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFS 229
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
+ + A+ + LL + A Y+ Q G +QIFD+ A L +FE ++
Sbjct: 230 KIKKMAFSEPEILHNLLQKCTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLP 289
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEG 283
+ +I+ +V+ +P I +A G+G +L+ LT + + LDW+V ++ + L
Sbjct: 290 YLKQIVDSVKETHPELPLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNI 348
Query: 284 PVQGNLD 290
VQGN D
Sbjct: 349 AVQGNAD 355
>gi|330722184|gb|EGH00081.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC2047]
Length = 270
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 134/269 (49%), Gaps = 15/269 (5%)
Query: 84 LGRNVRFVENEGPRMDPI-----TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F+ EGP+ + I +++ DL Y++ ++ +RK+L +
Sbjct: 1 MGLGLYFITGEGPKFEKTIRTAKDVDAISVIDGEKDL--GYVM---NAVRTIRKELNGRV 55
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YMI GG ++ + F A + LLD L+D YL AQI A
Sbjct: 56 PLIGFSGSPWTLATYMIEGGSTREFRHIKEFMLTQPEAMHELLDKLADSVISYLNAQILA 115
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNY 256
G +QIFDT G L + ++ + +I + + R+ + I F KG G L +
Sbjct: 116 GAQAVQIFDTWGGVLSGPLYREFSLNYMKKIAAGLLRENEGRRIPVIMFTKGGGQWLPDM 175
Query: 257 RRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
++ +GLDWS + A +L + +QGN+DP L + + V IL+ GSG
Sbjct: 176 -AAAGADCLGLDWSTDIGMARQLVGDKVSLQGNMDPSMLFAKPERIRQEVAYILERFGSG 234
Query: 316 -PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI+ DP++ V V
Sbjct: 235 NGHVFNLGHGISQFADPEHAKVFVDAVHE 263
>gi|262277147|ref|ZP_06054940.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [alpha proteobacterium
HIMB114]
gi|262224250|gb|EEY74709.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [alpha proteobacterium
HIMB114]
Length = 337
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 46/341 (13%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PPIWLMRQAGRY Y+ ++ K+ F ++C PE E T+ PI+ ++FDAAILFSDIL
Sbjct: 26 PPIWLMRQAGRYHSHYQNLKTKY-TFEELCKIPELICETTMGPIQDFDFDAAILFSDILF 84
Query: 80 IADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL-FLNYLLPIFQSISILRKKLPNH 137
D LG + F N GP +P+T Q +LN + F +Y+ ++++R LPN+
Sbjct: 85 PLDYLGMGLAF--NPGPEFANPLTEQ---ILNKEKEQSFSDYIKFQIDGLTLIRDTLPNN 139
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+LIGF GAP+T+ F + H Q+ NS N L + + E + Q
Sbjct: 140 KSLIGFVGAPYTLFK------FAQRHPQS------NSNLLNNFLPVIEKILEENIDLQFS 187
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG----YML 253
+D++ IFDT A L EF ++V I + KYP K F K L
Sbjct: 188 VDLDILMIFDTEAQHLNLDEFN----KNVKPFIEKIAHKYP-GKIGYFTKDIDDEKYESL 242
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL---- 309
K+ + L +G + + F+ + +QGN L + + ID L
Sbjct: 243 KSIKDLK-LTVVGFNQDI---FSKLSNTDLSLQGNFPNQYLAIED---IDEFKKHLDNFI 295
Query: 310 ------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
D+ +I +L HG+ NV + +R+E
Sbjct: 296 KYIKDQDLAKRAGWICSLDHGVLKTTPEHNVKLFIDKIRTE 336
>gi|116329571|ref|YP_799290.1| uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122464|gb|ABJ80357.1| Uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 340
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 161/338 (47%), Gaps = 32/338 (9%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGRY Y+ +R+K+ F ++C PE E+ P+ ++FD AILFSDIL
Sbjct: 18 PPVWMMRQAGRYHKHYQTLRQKY-TFEELCKNPELAAEVAFGPVDEFDFDVAILFSDILF 76
Query: 80 IADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ALG +R+ + GP ++ + +++ L P ++ ++++ +++ + R+++P
Sbjct: 77 SLEALGMGLRYT-DAGPVLNFSIRSEKDLKKLKP-VEDSISFMQFQKKAMHLTRERIPED 134
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
++IGF G PWT+ +Y +SG H N + N L+ + E + Q+
Sbjct: 135 KSVIGFVGGPWTLFTYAVSG----KHEGNLSLPKILTDVRNEFLEKIIRFLRENISLQLE 190
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNY 256
G +++ IFDT G L F I + YP K + KG A +
Sbjct: 191 GGAELVMIFDTAGGDLSPELFREIVIPG----IKILADSYP-GKVGYYGKGTASPHFQAV 245
Query: 257 RRLTDSNAIGLD--WSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL----- 309
+R+ G D W + F E + VQGN D L + + + + L
Sbjct: 246 QRIPTLAGFGFDHRWDLKEIFKNEKRM---VQGNFDQNLLFMEKEEFKRTLKSYLMPYRD 302
Query: 310 ----DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G ++ LGHG+ P+ +NV V+ VR
Sbjct: 303 LSPEERIG---WVCGLGHGVMPKTPEENVKSFVEIVRE 337
>gi|298708551|emb|CBJ49184.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 402
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 37/336 (11%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G P+WLMRQAGRY+ +R+ K Y + E P R
Sbjct: 85 LLRVAKGEKAERAPVWLMRQAGRYMSAFRKYSDK--------YPFRHRSE---NPGDRDR 133
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
++ + I AD VR +E+ ID L + + +++
Sbjct: 134 GTGPVISNPIRTKADV--EAVRVMED-------------------IDGKLPF---VGETL 169
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR + TLIGF GAPWT+A+Y I GG K + ++ F+ L+ L++
Sbjct: 170 KALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPTLFHSLMTKLANS 229
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+Y Q+ G VIQ+F++ A + +FE +A +S +++++P+ I FA
Sbjct: 230 IGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKQRHPDVPVIYFAN 289
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L++ +R T ++ I LD V + A E L PV GN+DP+ L+ + + V
Sbjct: 290 GGSSYLES-QRDTQADMISLDQFVNMRSARERLGASVPVSGNVDPLVLLGPTSGIKEAVR 348
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + GS I NLGHG+ +V LV + +
Sbjct: 349 SCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAK 384
>gi|116332460|ref|YP_802177.1| uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116127327|gb|ABJ77419.1| Uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 340
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 160/338 (47%), Gaps = 32/338 (9%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
PP+W+MRQAGRY Y+ +R+K+ F ++C PE E+ P+ ++FD AILFSDIL
Sbjct: 18 PPVWMMRQAGRYHKHYQTLRQKY-TFEELCKNPELAAEVAFGPVDEFDFDVAILFSDILF 76
Query: 80 IADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ALG +R+ + GP ++ + +++ L P ++ ++++ +++ + R+++P
Sbjct: 77 SLEALGMGLRYT-DAGPVLNFSIRSEKDLKKLKP-VEDSISFMQFQKKAMHLTRERIPED 134
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
++IGF G PWT+ +Y +SG H N + N L+ + E + Q+
Sbjct: 135 KSVIGFVGGPWTLFTYAVSG----KHEGNLSLPKILTDVRNEFLEKIIRFLRENISLQLE 190
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY-MLKNY 256
G +++ IFDT G L F I + YP K + KG +
Sbjct: 191 GGAELVMIFDTAGGDLSPELFREIVIPG----IKILADSYP-GKVGYYGKGTTSPHFQAV 245
Query: 257 RRLTDSNAIGLD--WSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL----- 309
+R+ G D W + F E + VQGN D L + + + + L
Sbjct: 246 QRIPTLAGFGFDHRWDLKEIFKNEKRM---VQGNFDQNLLFMEKEEFKRTLKSYLMPYRD 302
Query: 310 ----DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G ++ LGHG+ P+ +NV V+ VR
Sbjct: 303 LSPEERIG---WVCGLGHGVMPKTPEENVKSFVEIVRE 337
>gi|297516331|ref|ZP_06934717.1| uroporphyrinogen decarboxylase [Escherichia coli OP50]
Length = 273
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 11/268 (4%)
Query: 82 DALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
DA+G + F EGPR P+T + L P+ + L Y + ++ +R++L +
Sbjct: 2 DAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGY---VMNAVRTIRRELKGEV 58
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LIGF G+PWT+A+YM+ GG K + Y + +A + LLD L+ YL AQI A
Sbjct: 59 PLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKA 118
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNY 256
G + IFDT G L +++ ++ + +I+ + R+ + F KG G L+
Sbjct: 119 GAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAM 178
Query: 257 RRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
T +A+GLDW+ ++ A + + +QGN+DP L + + V IL G G
Sbjct: 179 AE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHG 237
Query: 316 P-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+FNLGHGI V P++ V+ V
Sbjct: 238 EGHVFNLGHGIHQDVPPEHAGVFVEAVH 265
>gi|108755399|emb|CAI77923.1| uroporphyrinogen decarboxylase precursor [Guillardia theta]
Length = 261
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 4/167 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQP 62
R ++ V +G P+WL RQAGR+LPEY +K+ NFL + P++ E T+QP
Sbjct: 78 RNDLMVRVARGEKAEKTPVWLFRQAGRHLPEYEAYKKETGCNFLQLLDDPKHVAECTMQP 137
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYL 120
IRRYN DAAILFSDILV+A+ALG V +G + P+ + E+ P + L
Sbjct: 138 IRRYNLDAAILFSDILVVAEALGIKVEMPGGKGITVPHPLASPSEVSTRIPASIDVKDKL 197
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
+ ++ +++K+L + LIGF APWT+ YM+ GG K + +NR
Sbjct: 198 SHVIDAVKLIKKELDGKVPLIGFSAAPWTLMYYMV-GGSSKKNQENR 243
>gi|224015230|ref|XP_002297273.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968067|gb|EED86423.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 314
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 9/240 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G + P+WLMRQAGRY+ +RQ K+ F + TP +EL+LQ R Y
Sbjct: 54 LVRCASGQQVERTPVWLMRQAGRYMSAFRQYSDKYP-FRERSETPSMAIELSLQCHRAYG 112
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
D I+FSDIL LG V+ GP + T ++ L + + LP +
Sbjct: 113 MDGIIMFSDILTPLPTLGIEFDVVKGLGPVISTEVRTEADVAKLKDVESVNFDETLPFIR 172
Query: 126 SI--SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN----SRAFNW 179
I S+ ++ + +LIGF GAP+T+A+Y I G K + + S+A +
Sbjct: 173 EILGSLSKEAEEANTSLIGFVGAPFTLAAYTIEGKSSKHCLSTKKMMMADEDGSSKAVSQ 232
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LD L+ + Y QI G VIQ+F++ A L +FE +A + + I ++ KYP+
Sbjct: 233 FLDKLAVMIGNYACHQIECGAQVIQVFESWAHQLSPRQFEAFAKSAAQKAIRIIKEKYPD 292
>gi|227496733|ref|ZP_03927007.1| uroporphyrinogen decarboxylase [Actinomyces urogenitalis DSM 15434]
gi|226833748|gb|EEH66131.1| uroporphyrinogen decarboxylase [Actinomyces urogenitalis DSM 15434]
Length = 279
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 44/278 (15%)
Query: 25 MRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
MRQAGR LPEYR +R + L++C PE E TLQP+RR+ DAA+ FSDI+V
Sbjct: 1 MRQAGRSLPEYRAMRAEVGLEMLEVCLRPELAAEATLQPVRRHGVDAAVFFSDIMVPLRL 60
Query: 84 LGRNVRFVENEGPRMD-PI-TTQEIYLL----------NPNIDLFLNYLLPIFQSISILR 131
G VR GP +D P+ T Q++ L +D + + +
Sbjct: 61 AGVGVRIEPGVGPVIDRPVRTRQDVEELVSHHYGEDEHAAGVDAVSQGVRAVVAELGTPE 120
Query: 132 KKLPNH--------------------------ITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+ P +IGF GAP+T+A+Y++ G +DH
Sbjct: 121 QAGPAQPLSPRGRRLSEREVAGLAHSRGKSGWTPVIGFGGAPFTLAAYLVEGRPSRDHLA 180
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFEN----Y 221
R + + A++ L+ + ++V+ +++ Q+ AG Q+FD+ AG L ++ Y
Sbjct: 181 ARTLMHADPEAWHALMTWCAEVTGQFIATQVEAGASAAQLFDSWAGSLAPADYRRAVAPY 240
Query: 222 AARSVGRIISAVRRKYPNA-KFISFAKGAGYMLKNYRR 258
+A+++ R AV ++ I F G +L RR
Sbjct: 241 SAQALERAGQAVSSATGSSVPLIHFGTGTARILTEMRR 278
>gi|289612975|emb|CBI59979.1| unnamed protein product [Sordaria macrospora]
Length = 191
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
MI+G ++ + R AY + A L+D + ++ +YL+ Q+ AGV+ +Q+FD+ +G L
Sbjct: 1 MIAGKGSREQAEARRMAYGDPAAVQALIDRIVAMTIDYLVGQVEAGVEAVQLFDSWSGSL 60
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-P 272
EFE + I+ +R + + I F KGAG L Y R T +AIGLD +V P
Sbjct: 61 APAEFERWVIAPTVAIVKGLRVRV-DVPIIGFPKGAGGKLAAYARETGVDAIGLDETVDP 119
Query: 273 LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+ EL PVQGNLDP+ L+ G + + GV+ +L P +FNLGHGI
Sbjct: 120 VWANHELPMGLPVQGNLDPLLLIAGGEALDAGVDRVLAAFADRPHVFNLGHGIQQDTPIA 179
Query: 333 NVLDLVKTVRS 343
+V LV VR
Sbjct: 180 HVERLVARVRG 190
>gi|262367398|gb|ACY63955.1| uroporphyrinogen decarboxylase [Yersinia pestis D182038]
Length = 273
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 130/266 (48%), Gaps = 11/266 (4%)
Query: 85 GRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
G + F EGPR PIT + L P+ + L Y + ++ +R++L + LI
Sbjct: 4 GWGLYFETGEGPRFQSPITCRADVEKLPIPDPEQELGY---VMNAVRTIRRELAGSVPLI 60
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWT+A+YM+ GG K + + Y + + LLD L+D YL AQI AG
Sbjct: 61 GFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLHLLLDKLADSVILYLNAQIKAGAQ 120
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYRRL 259
+ IFDT G L ++ ++ + +I+ + R+ + F KG G L+
Sbjct: 121 SVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENEGRRVPVTLFTKGGGPWLEAM-AA 179
Query: 260 TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
T +A+GLDW+ ++ A + + +QGN+DP L + V+ IL G G
Sbjct: 180 TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLYAPPARIEQEVSTILASFGQGEGH 239
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI V P + V V +
Sbjct: 240 VFNLGHGIHQDVPPAHAGAFVNAVHA 265
>gi|55959136|emb|CAI16441.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 227
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 8 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 67 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAP 147
+FQ+I++ R++L + LIGF GAP
Sbjct: 127 VFQAITLTRQRLAGRVPLIGFAGAP 151
>gi|190345411|gb|EDK37292.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 18/273 (6%)
Query: 84 LGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+G ++ VE +GP DP+ + ++I +N D+ L L F++I++ RKKL + L+
Sbjct: 1 MGFDIEMVEGKGPVFTDPLRSPEDIKKVNLKPDV-LKSLDWAFKAITLTRKKLNGRVPLL 59
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAPWT+ YM G K + + Y+ + + LL +D E+L Q+ AG
Sbjct: 60 GFVGAPWTLLVYMTEGQGSKMFRYAKQWIYEYTEEAHQLLQATTDACIEFLAQQVVAGAQ 119
Query: 202 VIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKY---PNAKFISFAKGAGYMLKN 255
++Q+F++ AG LG HEF + R + + A R+ + FAKGA Y L +
Sbjct: 120 MLQVFESWAGELGPHEFNEFCLPYLRQISAKLPARLRELGVTDDIPLTVFAKGAWYALDD 179
Query: 256 YRRLTDS--NAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L DS N + LDW A+++ + +QGNLDP + N+V+ +++
Sbjct: 180 ---LCDSGYNCVSLDWLYKPEDAVKVVNGRRITLQGNLDPGIMYGSNEVISQKTKQMIEG 236
Query: 312 LGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
G G +I N GHG P + P+ V +K
Sbjct: 237 FGGGKQNYIINFGHGTHPFMKPEKVEHFLKECH 269
>gi|323305601|gb|EGA59342.1| Hem12p [Saccharomyces cerevisiae FostersB]
Length = 289
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 26/278 (9%)
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYLLPIFQSIS 128
+ DILVI A+G V +E +GP +P+ E +L+ +D+ L L F++I+
Sbjct: 4 LFLVDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDV-LKELDWAFKAIT 62
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS------RAFNWLLD 182
+ R KL + L GFCG PWT+ YM G G +R+F + + LL
Sbjct: 63 MTRIKLDGEVPLFGFCGGPWTLMVYMTEG------GGSRLFRFAKQWINMYPELSHKLLQ 116
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK------ 236
++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 117 KITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQELGI 176
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLV 295
I FAKG+ Y L + + + LDWS A+++ K +QGNLDP +
Sbjct: 177 MEQIPMIVFAKGSWYALDKL-CCSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPGVMY 235
Query: 296 VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDP 331
+V+ V +++ G G +I N GHG P +DP
Sbjct: 236 GSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDP 273
>gi|55959134|emb|CAI16439.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 193
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ ++ + ++ + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVI 203
L+D YL+ Q+ AG +
Sbjct: 173 ILTDALVPYLVGQVVAGAQAL 193
>gi|146419515|ref|XP_001485719.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 14/271 (5%)
Query: 84 LGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+G ++ VE +GP DP+ + ++I +N D+ L L F++I++ RKKL + L+
Sbjct: 1 MGFDIEMVEGKGPVFTDPLRSPEDIKKVNLKPDV-LKSLDWAFKAITLTRKKLNGRVPLL 59
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAPWT+ YM G K + + Y+ + + LL +D E+L Q+ AG
Sbjct: 60 GFVGAPWTLLVYMTEGQGSKMFRYAKQWIYEYTEEAHQLLQATTDACIEFLAQQVVAGAQ 119
Query: 202 VIQIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRKY---PNAKFISFAKGAGYMLKN 255
++Q+F++ AG LG HEF + R + + A R+ + FAKGA Y L +
Sbjct: 120 MLQVFESWAGELGPHEFNEFCLPYLRQISAKLPARLRELGVTDDIPLTVFAKGAWYALDD 179
Query: 256 YRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
L N + LDW A+++ + +QGNLDP + N+V+ +++ G
Sbjct: 180 LCDL-GYNCVSLDWLYKPEDAVKVVNGRRITLQGNLDPGIMYGSNEVISQKTKQMIEGFG 238
Query: 314 SGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
G +I N GHG P + P+ V +K
Sbjct: 239 GGKQNYIINFGHGTHPFMKPEKVEHFLKECH 269
>gi|213421411|ref|ZP_03354477.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 186
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNY 119
+RRY DAAILFSDIL I DA+G + F EGPR P+T + L P+ + L Y
Sbjct: 1 MRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGY 60
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 61 ---VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 117
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV---RRK 236
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + +R+
Sbjct: 118 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREKRR 177
Query: 237 YPNA 240
P A
Sbjct: 178 SPRA 181
>gi|260941360|ref|XP_002614846.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851269|gb|EEQ40733.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 274
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 84 LGRNVRFVENEGPR-MDPITTQ---EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
+G + +E +GP +DP+ + + P+I L++ F++I++ R KL +
Sbjct: 1 MGFEIEMIEGKGPVFVDPLRSPADLSRVQMKPDILTSLDW---AFKAITLTRTKLNGRVP 57
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
L+GFCGAPWT+ YM G K + + Y+ ++ + LL ++D E+L Q+ AG
Sbjct: 58 LLGFCGAPWTLLVYMTEGQGSKMFRFAKQWLYEYTQESHKLLQAITDACIEFLAQQVVAG 117
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIIS---------AVRRKYPNAKFISFAKGAG 250
++Q+F++ AG LG HEF + + +I S V K P FAKGA
Sbjct: 118 AQMLQVFESWAGELGPHEFAEFCLPYLRQIASKLPLRLKELGVEEKIP---LTVFAKGAW 174
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
Y L + + + + LDW A+++ + +QGNLDP + ++V+ V +
Sbjct: 175 YALDDLCE-SGYDTVSLDWLYKPEDAVKVVGSRRITLQGNLDPGIMYGTDEVITQKVEQM 233
Query: 309 LDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G G +I N GHG P + P+ + +K
Sbjct: 234 IKGFGGGKQNYIINFGHGTHPFMKPEKIEHFLKECH 269
>gi|332287794|ref|YP_004422695.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
gi|325506680|gb|ADZ18318.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
Length = 307
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 45/330 (13%)
Query: 32 LPEYRQIR--KKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVR 89
+P+YR+++ + K F + + E TL DAAILF+DIL + D G N+
Sbjct: 1 MPQYRELKGSQTLKAFF---HNTDAITEATLLGPSLLKVDAAILFADILSLLD--GFNIS 55
Query: 90 FVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWT 149
+ GP++ +E+ D F +YLL ++I L K+L + LI F +P+T
Sbjct: 56 YDFAPGPQISFSPEEELVFTKDPQDTF-SYLL---EAIKNLVKRL--SVPLIAFAASPFT 109
Query: 150 VASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH 209
+A Y++ GG KD + F YQ+ + F+ LL L++ + YL QIHAG IQ+F++
Sbjct: 110 MACYLLDGGASKDFPRTMAFLYQHPKRFDALLKQLAEGTVIYLKEQIHAGASAIQLFES- 168
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKY---PNAKFISFAKG-AGYMLKNYRRLTDSNAI 265
S R+ SA+ +Y PN + I+ K + + R D N I
Sbjct: 169 ---------------SSLRLPSALFSRYVTLPNTQLIAQLKNHVSSPISLFCRCFDENFI 213
Query: 266 GL----------DWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L D+ V LS + G +QGN+DP ++ ++ + L VL
Sbjct: 214 DLYSTGADTLHPDYHVNLSKIYTSVTDPGSLQGNIDPALFLLPQDQFLNHLEKYLSVLKH 273
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P +IFN GHGI P+ +NV V + S
Sbjct: 274 QPKYIFNSGHGILPETPLENVQAAVLCLTS 303
>gi|168698515|ref|ZP_02730792.1| uroporphyrinogen decarboxylase [Gemmata obscuriglobus UQM 2246]
Length = 341
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 150/344 (43%), Gaps = 19/344 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K ++ +G + P+W MRQAGR+ PE+R++R +F + E + +L P R
Sbjct: 8 KHLLIRAARGERVERAPVWAMRQAGRWDPEFRKVRAGM-SFFEFSENVEASTRASLCP-R 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT---QEIYLLNPNIDLFLNYL 120
R+ DA ILF DI + A+G GP D P+ T + NP + + +
Sbjct: 66 RFGVDAIILFYDITTLPVAMGLPFELKPGAGPVPDRPVRTLGDLDRLAPNPAPETYAH-- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I Q + ++ +L + ++ F GAP+TVA+Y I G KD R F +N L
Sbjct: 124 --IRQLLKRVKDELHGDLPVLVFAGAPFTVATYCIGTG--KDVEATRAFVADAPAVWNGL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+ + +L I G D Q+FD+ AG L E++ +A I++
Sbjct: 180 LERLTGATVGFLRTLIGDGADAYQLFDSWAGALSPAEYDAWAQPQHSEILAGAT----GV 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN-Q 299
I F K Y+ + T ++ I L L+ A QGN+D L G +
Sbjct: 236 PRILFVKEGPYLERMC--ATGADVISLGSVHDLAAARRDHPHLVFQGNVDEEILRGGTPE 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D V A G I NL HG+ N V+ ++
Sbjct: 294 QVADAVRACRRAGGGARHILNLNHGVDKDTPVANFEAYVRAAKA 337
>gi|23005188|ref|ZP_00048138.1| COG0407: Uroporphyrinogen-III decarboxylase [Magnetospirillum
magnetotacticum MS-1]
Length = 204
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR LPEYR R+ + LD C P+ E+TLQP+RR+ DA I FSDI+V
Sbjct: 39 PVWFMRQAGRSLPEYRAAREGV-SMLDSCLRPDLASEITLQPVRRHRVDAGIFFSDIVVP 97
Query: 81 ADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
G V GP M T ++ L + +L + L PI +++++ L
Sbjct: 98 LRLAGVEVEIAPGVGPVMGQAYRTPDDVARLVES-ELTEDALAPIREAVALTVDAL-GTT 155
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LIGF GAP+T+A+Y++ G +DH R + + L+D+ +D+
Sbjct: 156 PLIGFAGAPFTLAAYLVEGRPSRDHLAARALLRGDPETWQRLVDWAADL 204
>gi|194374481|dbj|BAG57136.1| unnamed protein product [Homo sapiens]
Length = 170
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 23/179 (12%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R+ R ++F C +PE ELTLQ AL
Sbjct: 1 MRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQ---------------------AL 38
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V +GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF
Sbjct: 39 GMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGF 98
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG V
Sbjct: 99 AGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQV 157
>gi|323943586|gb|EGB39695.1| uroporphyrinogen decarboxylase [Escherichia coli H120]
Length = 143
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Query: 1 MNERK-QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E K + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIY--LLNPNIDLF 116
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + L P+ +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDE 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIG 142
L Y + ++ +R++L + LIG
Sbjct: 121 LGY---VMNAVRTIRRELKGEVPLIG 143
>gi|330938624|gb|EGH42191.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 103
Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 45/94 (47%), Positives = 62/94 (65%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPR 97
RY DAAILFSDIL I DA+G+ + F EGPR
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPR 98
>gi|294869182|ref|XP_002765773.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
gi|239865968|gb|EEQ98490.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
Length = 168
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 93/148 (62%), Gaps = 12/148 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ ++L +G ++ P+W+MRQAGRYLPE++++R + +F+ +C P+ E+T+QP
Sbjct: 26 KQNRLLRAARGEEVDEIPVWIMRQAGRYLPEFKELRAE-HDFVKVCQDPDLASEVTIQPY 84
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQE----IYLLNPNIDLFL 117
RR+N DA I+FSDIL I +G+++ V +GP + P + T E I L PN+ L
Sbjct: 85 RRFNKLDACIVFSDILTIPMLMGQHLEMVPGKGPVLSPKLETPEDIERILNLKPNVGEGL 144
Query: 118 NYLL-PIFQSISILRKKLPNHITLIGFC 144
Y+ IF ++S KL N +T+IGFC
Sbjct: 145 AYVYDAIFATVS----KLENQLTVIGFC 168
>gi|307110481|gb|EFN58717.1| hypothetical protein CHLNCDRAFT_140365 [Chlorella variabilis]
Length = 261
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKD 162
+++ L P +D L+ L + +++S LR ++ L+GF G PWT+A+Y + G ++
Sbjct: 2 EQVRALAP-LDDPLSSLPFVHETLSTLRGEIGGSGAALLGFVGTPWTLAAYSVEGRAERN 60
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
+ + Y + + + LLD L++ Y+ QI AG V+Q+FD+ A L + ++
Sbjct: 61 CRRTKTMMYGSPQVLHALLDHLTEALIVYVGYQIEAGAQVVQLFDSWAHHLTPEQSAEFS 120
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
RII+AVR KYP+ I A G G ++ IGLDW ++ A +
Sbjct: 121 MPYAERIIAAVRAKYPHVPLIFHANG-GAGKHAQLAACSADVIGLDWECTMAGARQAMGA 179
Query: 283 G-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQ 328
G +QGN+DPM L + + V L G I N+GHG+ TP+
Sbjct: 180 GRTLQGNVDPMVLFGPEAAIREAVTRCLVEAGPHHHILNVGHGVIEGTPE 229
>gi|315657606|ref|ZP_07910488.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492078|gb|EFU81687.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 359
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 27/342 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I + +G + P+W + Q+ P+ Q + +D C PE V+ L P+R++
Sbjct: 26 IRQAYRGKRPDSTPVWFLGQSALQHPDNWQ-DLSVREQMDYCLRPEVGVKTALDPVRQFG 84
Query: 68 FDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAA+ SD+L +G + VR ++ G M P+ + ++D + P +
Sbjct: 85 VDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRS------TADVDRIMALPNPDWSR 138
Query: 127 ISIL----RKKLPNHITLIGFCGAPWTVASYMISGGF-IKDHGQNRVFAYQNSRAFNWLL 181
+ L R +L LI GAP+ ++S ++ G + + Q R+F R + L+
Sbjct: 139 VETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRNWERLM 198
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF----ENYAARSVGRIISAVRRKY 237
+ S + +L+AQ+ G +VIQ+ D L E E+ E+YA + R
Sbjct: 199 SWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLTEGEYACLAESYAREIYNEFDEGIIR-- 256
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
IS + GA ++L + N +G+ + L+ A ++ +QGNLDP +++G
Sbjct: 257 -----ISCSLGAEHLLSSISPYV--NVLGVGDELTLAEAAQIVPGMVLQGNLDPDLILLG 309
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+L+ S P +FN+ + P DP V LV
Sbjct: 310 GSDAQAAARQVLESGLSAPAHVFNVAGRLDPDSDPDEVHRLV 351
>gi|304390398|ref|ZP_07372351.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326154|gb|EFL93399.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 359
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 27/342 (7%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I + +G + P+W + Q+ P+ Q + +D C PE V+ L P+R++
Sbjct: 26 IRQAYRGKRPDSTPVWFLGQSVLQHPDNWQ-DLSVREQMDYCLRPEVGVKTALDPVRQFG 84
Query: 68 FDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAA+ SD+L +G + VR ++ G M P+ + ++D + P +
Sbjct: 85 VDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRS------TADVDRIMTLPKPDWSR 138
Query: 127 ISIL----RKKLPNHITLIGFCGAPWTVASYMISGGF-IKDHGQNRVFAYQNSRAFNWLL 181
+ L R +L LI GAP+ ++S ++ G + + Q R+F R + L+
Sbjct: 139 VETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRNWERLM 198
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF----ENYAARSVGRIISAVRRKY 237
+ S + +L+AQ+ G +VIQ+ D L E E+ E+YA + R
Sbjct: 199 SWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLTEGEYACLAESYAREIYNEFDEGIIR-- 256
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
IS + GA ++L + N +G+ + L+ A ++ +QGNLDP +++G
Sbjct: 257 -----ISCSLGAEHLLSSISPYV--NVLGVGDELTLAEAAQIVPGMVLQGNLDPDLILLG 309
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
+L+ S P +FN+ + P DP V LV
Sbjct: 310 GSDAQAAARQVLESGLSAPAHVFNVAGRLDPDSDPDEVRRLV 351
>gi|224128734|ref|XP_002328953.1| predicted protein [Populus trichocarpa]
gi|222839187|gb|EEE77538.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 12/213 (5%)
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
N +GF GAP T+ASY++ GG K + + A+ + + + L A+Y+ Q
Sbjct: 3 NKAAGLGFVGAPLTLASYVVEGGSSKHFTKVKRLAFSQPKIPH---ELLQTSMAKYIQYQ 59
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+G +QIF + A L +FE ++ + +I+ V + +PN I A G+G +L+
Sbjct: 60 ADSGAQTVQIFASWATELSPVDFEEFSLPYLKQIVDTVNQSHPNLPLILHASGSGGLLER 119
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVL 312
LTD + + +DWSV + A ++ GP VQGN+DP L + + + +N ++
Sbjct: 120 L-ALTDVDVVSMDWSVDM--AEGRRRLGPDVAVQGNVDPGVLFRSKEFITNRINDVVRKA 176
Query: 313 GSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
G G I NLGHGI TP+ + + L++ K +R
Sbjct: 177 GKGKHILNLGHGIVVGTPEENVAHFLEVAKRIR 209
>gi|255520182|ref|ZP_05387419.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-175]
Length = 198
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 157 GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
GG K++ Q + F Y+ + L++ L ++A YLIAQI+AG +Q+FD+ G L
Sbjct: 1 GGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRA 60
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
++ Y + I+ V+ +P I A GA ++L + + + +G+DW ++ A
Sbjct: 61 DYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSA 119
Query: 277 LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNV 334
+ +QGNLDP L+ + + + N IL VL G +IFNLGHG+ P+V P+ +
Sbjct: 120 RKKVPTKAIQGNLDPSTLLAPEKCLKEA-NRILQEGVLEPG-YIFNLGHGVFPEVPPEML 177
Query: 335 LDLVKTV--RSE 344
L + RSE
Sbjct: 178 KKLTNYIHERSE 189
>gi|227540671|ref|ZP_03970720.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33300]
gi|227239475|gb|EEI89490.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33300]
Length = 213
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+++++L I LIGF GAP+T+ SY++ G +D + + + +++L ++D++
Sbjct: 2 VIQERLNGSIPLIGFAGAPFTILSYLVEGKSSRDFKLTKTLLNNDPKLAHYILQKITDLT 61
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
+YL QI AGV+ +Q+FD+ A L +++ + +IIS + R+ ISFA+G
Sbjct: 62 VDYLNMQIAAGVNAVQLFDSWAMALTWNDYIEFGHAYTQQIISRINRE--GIPVISFARG 119
Query: 249 AGYMLKNYRRLTDS--NAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+ Y ++++ + I LDW+ L+ L K VQGN DP+ L V+ +
Sbjct: 120 SSVF---YPIMSEAKPDVISLDWNADILNVKNNLPKGIAVQGNFDPIILYADKPVIRKKI 176
Query: 306 NAILDVL-GSGPFIFNLGHGITPQV 329
+ + + + G F+FNLGHGI P +
Sbjct: 177 HELFERMRGQDGFLFNLGHGIMPDM 201
>gi|298345898|ref|YP_003718585.1| putative uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC
43063]
gi|298235959|gb|ADI67091.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC
43063]
Length = 313
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 139/309 (44%), Gaps = 26/309 (8%)
Query: 41 KFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGPRMD 99
+ +D C PE V+ L P+R++ DAA+ SD+L +G + VR ++ G M
Sbjct: 12 SVREQMDYCLRPEVGVKTALDPVRQFGVDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMR 71
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISIL----RKKLPNHITLIGFCGAPWTVASYMI 155
P+ + ++D + P + + L R +L LI GAP+ ++S ++
Sbjct: 72 PLRS------TADVDRIMTLPKPDWSRVETLSRAQRSELAPEKVLIAIAGAPFVLSSLLV 125
Query: 156 SGGF-IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG 214
G + + Q R+F R + L+ + S + +L+AQ+ G +VIQ+ D L
Sbjct: 126 EGSVSVPQNLQTRIFMQSQPRNWERLMSWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLT 185
Query: 215 EHEF----ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
E E+ E+YA + R IS + GA ++L + N +G+
Sbjct: 186 EGEYACLAESYAREIYNEFDEGIIR-------ISCSLGAEHLLSSISPYV--NVLGVGDE 236
Query: 271 VPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQV 329
+ L+ A ++ +QGNLDP +++G +L+ S P +FN+ + P
Sbjct: 237 LTLAEAAQIVPGMVLQGNLDPDLILLGGSDAQAAARQVLESGLSAPAHVFNVAGRLDPDS 296
Query: 330 DPKNVLDLV 338
DP V LV
Sbjct: 297 DPDEVRRLV 305
>gi|13676390|dbj|BAB41184.1| uroporphyrinogen decarboxylase [Amaranthus tricolor]
Length = 191
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 15/198 (7%)
Query: 85 GRNVRF--VENEGPRM-DPITTQEIYLLNPNIDLFLNYL----LP-IFQSISILRKKLPN 136
G N+ F V+ +GP + DP+ TQE ++D ++ +P + +++ILRK++ N
Sbjct: 1 GMNIPFDIVKGKGPIIFDPLRTQE------DVDRVREFVPEESVPYVGNALTILRKEVDN 54
Query: 137 HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
++GF GAP+T+ASY++ GG K + + A+ + + + LL + A Y+ Q
Sbjct: 55 KAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSDPKVLHALLQKFATSMANYVKYQA 114
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
G +QIFD+ A L +FE ++ + +I+ +V+ +PN I +A G+G +L+
Sbjct: 115 DHGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKSTHPNLPIILYASGSGGLLERL 174
Query: 257 RRLTDSNAIGLDWSVPLS 274
LT + + LDW+V ++
Sbjct: 175 -PLTGVDVVSLDWTVDMA 191
>gi|255026907|ref|ZP_05298893.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-003]
Length = 189
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 7/183 (3%)
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
+ F Y+ + L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y
Sbjct: 1 TKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPV 60
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV 285
+ I+ V+ +P I A GA ++L+ + + + +G+DW ++ A + +
Sbjct: 61 IEMIVREVKAVHPTTPIIMQAVGASHLLEEWETMP-LDVVGVDWRETITSARKKVPTKAI 119
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILD--VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV-- 341
QGNLDP L+ + + + N IL VL G +IFNLGHG+ P+V P+ + L +
Sbjct: 120 QGNLDPSTLLAPEKCLKEA-NRILQEGVLEPG-YIFNLGHGVFPEVPPEMLKQLTNYIHE 177
Query: 342 RSE 344
RSE
Sbjct: 178 RSE 180
>gi|227536216|ref|ZP_03966265.1| possible uroporphyrinogen decarboxylase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227244113|gb|EEI94128.1| possible uroporphyrinogen decarboxylase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 126
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G+ PP+W+MRQAGRY+PEY +I+ K+ FL+MC TPE ++T+ P+ + DAAIL
Sbjct: 16 GHQTERPPVWMMRQAGRYMPEYWEIKNKY-TFLEMCKTPEIAADVTMLPVDLLDIDAAIL 74
Query: 74 FSDILVIADALGRNVRFVENEGPRM-DPITTQE 105
FSDILV +A+G ++ F + GPR +P+ + E
Sbjct: 75 FSDILVTPEAMGGDLSFEQGVGPRFSNPVRSWE 107
>gi|289808187|ref|ZP_06538816.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 91
Score = 95.5 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/87 (48%), Positives = 57/87 (65%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRF 90
RRY DAAILFSDIL I DA+G + F
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYF 91
>gi|255024904|ref|ZP_05296890.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-208]
Length = 166
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 90/152 (59%), Gaps = 12/152 (7%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G V GP + +PI T +++ + P I++ Y+L +I +L +
Sbjct: 81 LPGMGVEVEIKSGIGPVIHNPIRTFQDVEKLTMFKPEIEV--PYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
+ + LIGF GAP+T+ASYMI GG K++ Q +
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQTK 166
>gi|111608958|gb|ABH11036.1| uroporphyrinogen decarboxylase [Polytomella parva]
Length = 221
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G I P WLMRQAGRY YR + K+ +F T + VE++LQP + +
Sbjct: 38 LVRAARGEEIERVPCWLMRQAGRYQKVYRDLAAKYPSFRQRSETTDLIVEISLQPWKSFK 97
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL A+G +GP + PI T E ++ D+ L+ L + +
Sbjct: 98 PDGVIMFSDILTPLPAMGIEFDIDNTKGPIIQKPIRTME--QVDELYDIDLSRLEFVSSA 155
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R ++ ++GF G+PWT+A+Y++ G + + + +Y N LL L+
Sbjct: 156 LTHIRAEVGRKSAVLGFIGSPWTLATYIVEGASSQHYRTIKNLSYSNPDILEALLRKLTI 215
Query: 187 VSAEYL 192
+Y+
Sbjct: 216 ALTDYI 221
>gi|297516834|ref|ZP_06935220.1| uroporphyrinogen decarboxylase [Escherichia coli OP50]
Length = 86
Score = 94.4 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALG 85
RRY DAAILFSDIL + DA+G
Sbjct: 65 RRYPLDAAILFSDILTVPDAMG 86
>gi|255025826|ref|ZP_05297812.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-003]
Length = 164
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 90/150 (60%), Gaps = 12/150 (8%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
+G +V GP + +PI + +++ + P I+ + Y+L +I +L +
Sbjct: 81 LPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIE--VPYVL---DTIKLLADDML 135
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+ + LIGF GAP+T+ASYMI GG K++ Q
Sbjct: 136 D-VPLIGFAGAPFTLASYMIEGGPSKNYHQ 164
>gi|225563004|gb|EEH11283.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 111
Score = 93.2 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI RY
Sbjct: 13 LLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPIERYA 71
Query: 68 --FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ 104
DAAI+FSDILVI G + R E P++ P+T +
Sbjct: 72 GLIDAAIIFSDILVIPTGHGHDCRDDRQERPQL-PLTPK 109
>gi|340183|gb|AAB59456.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 161
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V ++GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF
Sbjct: 1 GMEVTMVPSKGPSFPEPLREEQDLEALRDPEVVASELGYVFQAITLTRQRLAGRVPLIGF 60
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG
Sbjct: 61 AGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGA--- 117
Query: 204 QIFDTHAGCLGEHEFENYA---ARSVGRIISAVRRK 236
Q+F++HAG LG F +A R V + + A R+
Sbjct: 118 QLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 153
>gi|55792589|gb|AAV65387.1| plastid uroporphyrinogen decarboxylase [Prototheca wickerhamii]
Length = 192
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P W+MRQAGRY YR + K +F + VE++LQP +
Sbjct: 21 MVRASRGETVERSPCWMMRQAGRYQKAYRDLALKHPSFRERSEDVGLIVEISLQPWESFK 80
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDI+ A+G + GPR+ DPI ++E +D L+ L + +
Sbjct: 81 PDGVIIFSDIMTPLPAMGIPFEIDDARGPRIADPIRSREQVGQLHALD--LDQLSFVGDA 138
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
+ LR + ++GF G+PWT+A+Y++ GG
Sbjct: 139 LRALRATVAGQAAVLGFVGSPWTLATYIVEGG 170
>gi|326774219|ref|ZP_08233498.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
gi|326635926|gb|EGE36833.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
Length = 250
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
++ F GAP+T+A+Y++ G +DH R + +++ L+ + + ++ E++ Q+ AG
Sbjct: 21 VLAFGGAPFTLAAYLVEGRPSRDHLAARTLMRADPDSWDRLMTWCARLTGEFIATQVRAG 80
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-----NAKFISFAKGAGYMLK 254
Q+FD+ AG L + A + R+ A I F G +L
Sbjct: 81 AAAAQLFDSWAGSLSPRAYRERVAPYSALALDVARQAVSPTTGKAAPLIHFGTGTARLLG 140
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG-------PVQGNLDPMRLVVGNQVMIDGVNA 307
R+ ++A+G+D + L A+E E PVQGNLDP L ++ + ++A
Sbjct: 141 LMRQ-AGADAVGVDERIELGEAIEALAEADPQAGACPVQGNLDPALLAAPWPILAEELDA 199
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+L + P + NLGHG+ P D + +V V
Sbjct: 200 VLAAGRAAPGHVVNLGHGVPPATDADVLTRIVARV 234
>gi|326772616|ref|ZP_08231900.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
gi|326637248|gb|EGE38150.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
Length = 209
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRY 66
+LE L G P+W MRQAGR LPEYR +R + L+ C P E+TLQP+RR+
Sbjct: 102 LLEALAGRRPARTPVWFMRQAGRSLPEYRALRARAGVPMLEACLDPALAAEVTLQPVRRH 161
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD 99
DAA+ FSDI+V G VR E GP +D
Sbjct: 162 GVDAAVFFSDIMVPLRLAGVGVRIEEGVGPVLD 194
>gi|255024534|ref|ZP_05296520.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-208]
Length = 166
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 3/156 (1%)
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA
Sbjct: 2 YLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAAHPTTPIIMQAVGAS 61
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD 310
++L + + + +G+DW ++ A + +QGNLDP L+ + + + + +
Sbjct: 62 HLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPAKCLEEADRILQE 120
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV--RSE 344
+ +IFNLGHG+ P+V P+ + L + RSE
Sbjct: 121 GVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERSE 156
>gi|118487458|gb|ABK95556.1| unknown [Populus trichocarpa]
Length = 159
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ V++ +PN I +A G
Sbjct: 2 AKYIQYQADSGAQTVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQSHPNLPLILYASG 61
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGV 305
+G +L+ LT + + LDWSV + A ++ GP VQGN+DP L + + + +
Sbjct: 62 SGGLLERL-ALTGVDVVSLDWSVDM--AEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRI 118
Query: 306 NAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
++ G G I NLGHGI TP+ + + ++ K +R
Sbjct: 119 YDVVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKGIR 158
>gi|226328703|ref|ZP_03804221.1| hypothetical protein PROPEN_02598 [Proteus penneri ATCC 35198]
gi|225201889|gb|EEG84243.1| hypothetical protein PROPEN_02598 [Proteus penneri ATCC 35198]
Length = 187
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y +A + LLD L+D YL AQI AG I IFDT G L +++ ++ + +I+
Sbjct: 2 YAEPQALHLLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLHYMHKIV 61
Query: 231 SAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQG 287
+ R+Y K F KG G L+ T +A+GLDW++ + A + + +QG
Sbjct: 62 DGLIREYDGRKVPVTLFTKGGGRWLEAMAA-TGCDALGLDWTIDIEDARRRVGDKVALQG 120
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
N+DP L + V IL G G +FNLGHGI V P++ + V
Sbjct: 121 NMDPSMLYAPPARIEQEVETILAGFGKGNGHVFNLGHGIHQDVPPEHAGAFIDAVH 176
>gi|142136|gb|AAB39039.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
Length = 79
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++L +G V++ PP+W+MRQAGRY+ YR +R K+ F + TPE +E++LQP R +
Sbjct: 9 RLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQPFRAF 68
Query: 67 NFDAAILFSDI 77
D ILFSDI
Sbjct: 69 KPDGVILFSDI 79
>gi|323943614|gb|EGB39722.1| uroporphyrinogen decarboxylase [Escherichia coli H120]
Length = 200
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
M+ GG K + Y + +A + LLD L+ YL AQI AG + IFDT G L
Sbjct: 1 MVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVL 60
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+++ ++ + +I+ + R+ + F KG G L+ T +A+GLDW+
Sbjct: 61 TGRDYQQFSLYYMHKIVDGLVRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTT 119
Query: 272 PLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQV 329
++ A + + +QGN+DP L + + V IL G G +FNLGHGI V
Sbjct: 120 DIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDV 179
Query: 330 DPKNVLDLVKTVR 342
P++ V+ V
Sbjct: 180 PPEHAGVFVEAVH 192
>gi|289808186|ref|ZP_06538815.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 138
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + LLD L+
Sbjct: 3 AVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLA 62
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK--FI 243
YL AQI AG + IFDT G L +++ ++ + +I+ + R+ +
Sbjct: 63 KSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVT 122
Query: 244 SFAKGAGYMLK 254
F KG G L+
Sbjct: 123 LFTKGGGQWLE 133
>gi|331665653|ref|ZP_08366549.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
gi|331057171|gb|EGI29163.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
Length = 184
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + +A + LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+
Sbjct: 2 YADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIV 61
Query: 231 SAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQG 287
+ R+ + F KG G L+ T +A+GLDW+ ++ A + + +QG
Sbjct: 62 DGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQG 120
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
N+DP L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 121 NMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 176
>gi|332749194|gb|EGJ79616.1| uroporphyrinogen decarboxylase family protein [Shigella flexneri
2747-71]
Length = 185
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 5/176 (2%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + +A + LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+
Sbjct: 3 YADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIV 62
Query: 231 SAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQG 287
+ R+ + F KG G L+ T +A+GLDW+ ++ A + + +QG
Sbjct: 63 DGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQG 121
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
N+DP L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 122 NMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 177
>gi|256253975|ref|ZP_05459511.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 68
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
LQ+EG VQGNLD +R+V G + +GV+AIL+ +G GP +FNLGHGITPQ +NV ++
Sbjct: 1 LQEEGAVQGNLDLLRVVAGGNALDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMI 60
Query: 339 KTVRSEK 345
VR K
Sbjct: 61 DRVRGGK 67
>gi|116779035|gb|ABK21110.1| unknown [Picea sitchensis]
Length = 178
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
A+ + + LL ++ A Y+ Q G V+QIFD+ A L +FE ++ + I
Sbjct: 2 AFCMPKVLHALLHVFAESMANYICYQADNGAQVVQIFDSWATELSPVDFEEFSLPYLKYI 61
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGN 288
+ +V++ +P I +A G+G +L+ L+ + I LDW+V ++ A + + VQGN
Sbjct: 62 VESVKKTHPKLPLILYASGSGGLLERL-PLSGVDVISLDWTVDMAEARRRIGIDIAVQGN 120
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+DP L + + + G+ I NLGHG+ TP+ + + ++ K +R
Sbjct: 121 VDPGALFGSKDFITKRIYDTVSKAGNSKHILNLGHGVLVGTPEDNVAHFFEVAKGIR 177
>gi|119627413|gb|EAX07008.1| uroporphyrinogen decarboxylase, isoform CRA_b [Homo sapiens]
Length = 131
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 87 NVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCG 145
V V +GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF G
Sbjct: 2 EVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAG 61
Query: 146 APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
APWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG V
Sbjct: 62 APWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQV 118
>gi|315654485|ref|ZP_07907391.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
gi|315490949|gb|EFU80568.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
Length = 229
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
I + +G + P+W + Q+ P+ Q + +D C PE V+ L +R++
Sbjct: 26 IRQAYRGKRPDSTPVWFLGQSVLQHPDNWQ-DLSVREQMDYCLRPEVGVKTALDSVRQFG 84
Query: 68 FDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAA+ SD+L +G + VR ++ G M P+ + ++D + P +
Sbjct: 85 VDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRS------TADVDRIMALPNPDWSR 138
Query: 127 ISIL----RKKLPNHITLIGFCGAPWTVASYMISGGF-IKDHGQNRVFAYQNSRAFNWLL 181
+ L R +L LI GAP+ ++S ++ G + + Q R+F R + L+
Sbjct: 139 VETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRNWERLM 198
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQI 205
+ S + +L+AQ+ G +VIQ+
Sbjct: 199 SWCSSLVRHFLMAQVRGGAEVIQM 222
>gi|219666265|ref|YP_002456700.1| uroporphyrinogen decarboxylase [Desulfitobacterium hafniense DCB-2]
gi|219536525|gb|ACL18264.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfitobacterium
hafniense DCB-2]
Length = 335
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 138/311 (44%), Gaps = 22/311 (7%)
Query: 41 KFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-- 98
K K +L E + L +++++DA ++ D + A+ALG V F EN P +
Sbjct: 36 KLKRYLQ---NGEILAQCQLDSQQKFDYDAVFVYGDNCIEAEALGSRVYFPENAYPYIEK 92
Query: 99 ----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
DP +++ NP+ D + LL +++++L+ +L + + + G P ++AS +
Sbjct: 93 YRLEDPRQLKDLPDFNPSTDGRMPELL---RAVALLKTELGDSLPIAGVVLGPMSIASQL 149
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GC 212
+ + + + + ++ F S ++ + +A + G + + D A
Sbjct: 150 MGLERLLYLLLDSPCEFAD------IIRFASGITLKAGLALLAQGAHISAVIDPSASQSI 203
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L F Y ++ I S + A ++ + +L YR+ + G+D+ VP
Sbjct: 204 LPSEMFGRYLLPTIRDIFSQFKGAGAMASWLVITGNSQGLLPYYRQ-CGVDIAGIDYEVP 262
Query: 273 LSFALELQKEGPVQGNLDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP 331
L+ AL+ + + + GN+ P R V Q +I ++ + FI + G + P
Sbjct: 263 LAEALKWEGDFLISGNIKPYRFVNQTPQEIIREGKELISLAAGRRFILSSGCEVPLDTKP 322
Query: 332 KNVLDLVKTVR 342
+N+ L+K VR
Sbjct: 323 ENLAALIKAVR 333
>gi|89892996|ref|YP_516483.1| hypothetical protein DSY0250 [Desulfitobacterium hafniense Y51]
gi|89332444|dbj|BAE82039.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 289
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 133/296 (44%), Gaps = 19/296 (6%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM------DPITTQEIYLL 109
+ L +++++DA ++ D + A+ALG V F EN P + DP +++
Sbjct: 2 AQCQLDSQQKFDYDAVFVYGDNCIEAEALGSRVYFPENAYPYIEKYRLEDPRQLKDLPDF 61
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
NP+ D + LL +++++L+ +L + + + G P ++AS ++ + +
Sbjct: 62 NPSTDGRMPELL---RAVALLKTELGDSLPIAGVVLGPMSIASQLMGLERLLYLLLDSPC 118
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVG 227
+ + ++ F S ++ + +A + G + + D A L F Y ++
Sbjct: 119 EFAD------IIRFASGITLKAGLALLAQGAHISAVIDPSASQSILPSEMFGRYLLPTIR 172
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
I S + A ++ + +L YR+ + G+D+ VPL+ AL+ + + + G
Sbjct: 173 DIFSQFKGAGAMASWLVITGNSQGLLPYYRQ-CGVDIAGIDYEVPLAEALKWEGDFLISG 231
Query: 288 NLDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
N+ P R V Q +I ++ + FI + G + P+N+ L+K VR
Sbjct: 232 NIKPYRFVNQTPQEIIREGKELISLAAGRRFILSSGCEVPLDTKPENLAALIKAVR 287
>gi|213621143|ref|ZP_03373926.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 123
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 83 ALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G + F EGPR P+T + L P+ + L Y + ++ +R++L +
Sbjct: 1 AMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGY---VMNAVRTIRRELKGEVP 57
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A+YM+ GG K + Y + +A + LLD L+ YL AQI AG
Sbjct: 58 LIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAG 117
Query: 200 VDVIQI 205
+ I
Sbjct: 118 AQSVMI 123
>gi|213584436|ref|ZP_03366262.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 67
Score = 68.9 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64
Query: 64 RRY 66
RRY
Sbjct: 65 RRY 67
>gi|219558687|ref|ZP_03537763.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
gi|289570854|ref|ZP_06451081.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
gi|289544608|gb|EFD48256.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 157
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKF-ISFAKGAGYM---LK 254
+D IQ+FD+ AG L ++ Y R+ +A+ P F + A+ G M +
Sbjct: 1 MDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEHGVPMTHFGVGTAELLGAMSEAVT 60
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDV-- 311
R +G+DW PL+ A G +QGNLDP ++ G + A++D
Sbjct: 61 AGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDDGR 120
Query: 312 ----LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 121 RAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 156
>gi|108708052|gb|ABF95847.1| Uroporphyrinogen decarboxylase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 299
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
L +AGR Y+ + ++ +F + + VE++LQP + + D AILFSDIL
Sbjct: 67 LAYEAGRE--SYQLLCERHPSFCERSELVDLVVEISLQPWKVFTPDGAILFSDILTPLPR 124
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQSISILRKKLPNHITLI 141
+ V+ +G + DP+ T +N + +P + Q+++ILR+++ N T++
Sbjct: 125 MNIPFDIVKGKGSVIFDPLRTA--AAVNEVREFVPEEWVPYVGQALNILREEINNEATVL 182
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFA 170
F GAP+T+ASY + GG K+ + + A
Sbjct: 183 SFVGAPFTLASYCVEGGSSKNFSKIKKMA 211
>gi|218671579|ref|ZP_03521249.1| uroporphyrinogen decarboxylase [Rhizobium etli GR56]
Length = 53
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
R+V G + + +G++ IL LG GP IFNLGHGITPQ DP +V LV+ VR K
Sbjct: 1 RVVAGGRALEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVERVRGAK 53
>gi|4140695|gb|AAD04167.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 100
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
WT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG +Q+F+
Sbjct: 1 WTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFE 60
Query: 208 THAGCLGEHEFENYA---ARSVGRIISAVRRK 236
+HAG LG F +A R V + + A R+
Sbjct: 61 SHAGHLGPQLFNKFALPYIRDVAKQVKARLRE 92
>gi|156342876|ref|XP_001620959.1| hypothetical protein NEMVEDRAFT_v1g5010 [Nematostella vectensis]
gi|156206473|gb|EDO28859.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
WT+ SYMI GG + ++R + Y + A + LL L+D E+L+ Q AG ++Q+F+
Sbjct: 1 WTLMSYMIEGGGSTNFTKSRKWLYAHMEASSKLLQILTDAVVEHLVLQARAGAQILQVFE 60
Query: 208 THAGCLGEHEFENYAARSVGRIISAVRRK 236
+H G LG F ++ + +I V+ K
Sbjct: 61 SHGGLLGHDMFMLFSLPYLRQIAEKVKEK 89
>gi|255522365|ref|ZP_05389602.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL
J1-175]
Length = 85
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGR PEYR++++K+ F ++ + PE +T P+ +Y DAAIL+ DI+
Sbjct: 22 PVWYMRQAGRSQPEYRKLKEKYSLF-EITHQPEICAYVTKLPVDQYGVDAAILYKDIMTP 80
Query: 81 ADALG 85
+G
Sbjct: 81 LPGMG 85
>gi|153867896|ref|ZP_01998089.1| Uroporphyrinogen decarboxylase [Beggiatoa sp. SS]
gi|152144784|gb|EDN71911.1| Uroporphyrinogen decarboxylase [Beggiatoa sp. SS]
Length = 126
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFN 320
NA+GLDW +P+S A + + + +QGN+DP L + + + V IL G G +FN
Sbjct: 38 NALGLDWKLPISMARDRVGDQVALQGNMDPCILYASPERIREEVATILASFGKGNGHVFN 97
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHGI P +DP++V ++ V +
Sbjct: 98 LGHGIHPTIDPEHVSAFIEAVHT 120
>gi|213583356|ref|ZP_03365182.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 152
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + +A + LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+
Sbjct: 12 YADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIV 71
Query: 231 SAVRRKYPNAK--FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQG 287
+ R+ + F KG G L+ T +A+GLDW+ ++ A + + +QG
Sbjct: 72 DGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQG 130
Query: 288 NLDPMRLVVGNQVMIDGVNAIL 309
N+DP L + D V IL
Sbjct: 131 NMDPSMLYAPPARIEDEVATIL 152
>gi|213584369|ref|ZP_03366195.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 83
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIY--LLNPNIDLFLNYLLPIF 124
DAAILFSDIL I DA+G + F EGPR P+T + L P+ + L Y++
Sbjct: 2 LDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVM--- 58
Query: 125 QSISILRKKLPNHITLIGFCGAPWT 149
++ +R++L + LIGF G+PWT
Sbjct: 59 NAVRTIRRELKGEVPLIGFSGSPWT 83
>gi|261221115|ref|ZP_05935396.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|260919699|gb|EEX86352.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 55
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
MR+V G + +GV+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 1 MRVVAGGNALDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 54
>gi|227529401|ref|ZP_03959450.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350682|gb|EEJ40973.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 80
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ 104
E+TLQP+RRY DAAILFSDIL + DA+G + F EGPR P+T +
Sbjct: 1 EVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCK 49
>gi|38047565|gb|AAR09685.1| similar to Drosophila melanogaster Updo [Drosophila yakuba]
Length = 144
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 207 DTHAGCLGEHEFENYAARSVGRIISAV-----RRKYPNAKFISFAKGAGYMLKNYRRLTD 261
++ A L + +F + + RI + ++ P FAKGAG+ LK L
Sbjct: 1 ESSAEHLSKEQFLQWGVPYLKRIRDELVDRLTKKAIPVVPMTLFAKGAGHSLKEQSEL-G 59
Query: 262 SNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ IGLDW+V PL + +QGNLDP + + + ++ G +I N
Sbjct: 60 YDVIGLDWTVDPLEARTLVGPNITLQGNLDPQDMYRDPDELRNLTTEMVHKFGKSRYIAN 119
Query: 321 LGHGITPQVDPKNVLDLVKTVR 342
LGHGITPQ ++ LV+ V
Sbjct: 120 LGHGITPQTPITSMEVLVEAVH 141
>gi|194379832|dbj|BAG58268.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ-- 61
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQVR 73
Query: 62 -PIRRYNFDAAIL 73
P +R F ++
Sbjct: 74 GPQKRERFMPSVC 86
>gi|218192784|gb|EEC75211.1| hypothetical protein OsI_11474 [Oryza sativa Indica Group]
Length = 209
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 49/211 (23%)
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
N ++GF GAP+T+ASY + GG K+ + + A+
Sbjct: 43 NEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEP--------------------- 81
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
+V+Q D+ R+ R +P I +A G+G +L+
Sbjct: 82 -----EVMQPADSP------------------RLWIVSRETHPELPLILYASGSGGLLER 118
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
LT + + LDW+V ++ + L VQGN+DP L + + + + G+
Sbjct: 119 LP-LTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISKRIFDTVQKAGN 177
Query: 315 GPFIFNLGHGI---TPQVDPKNVLDLVKTVR 342
+ NLGHGI TP+ + + ++ K +R
Sbjct: 178 SGHVLNLGHGIKVGTPEENVAHFFEVAKGIR 208
>gi|4140696|gb|AAD04168.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 109
Score = 55.8 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAK + L+ + +GLDW+V A E + K +QGNLDP L + +
Sbjct: 1 IIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEI 59
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 60 GQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV 99
>gi|206900521|ref|YP_002250449.1| methylcobamide:CoM methyltransferase MtbA, putative [Dictyoglomus
thermophilum H-6-12]
gi|206739624|gb|ACI18682.1| methylcobamide:CoM methyltransferase MtbA, putative [Dictyoglomus
thermophilum H-6-12]
Length = 319
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 114/245 (46%), Gaps = 18/245 (7%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQE-IYLLNPNIDLFLNY 119
+ R+N D F D+ V A+ALG + F EN+ P R P+ ++ + +
Sbjct: 43 VERFNPDGIFPFMDLTVEAEALGLKIEFPENDNPSVREHPVKNRDALNEIKRKWKGVSER 102
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
++ + ++ K+ +I G+ P+T+A ++ + D G N + ++
Sbjct: 103 MITFIKVCEMMAKEF--NILKGGYVIGPFTLAGELVG---VNDLGINVI---EDPDFVEE 154
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++DF + V EY A + G+D+I + + A L +F ++ + + S +++
Sbjct: 155 VVDFTTSVIFEYAKALLETGIDMIAVLEPTAVILSPQQFREFSMKHFKHLSSELKKPV-- 212
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV-G 297
+++++ + + + + LD +V L +A E+ + + GNLDP+++ + G
Sbjct: 213 --IYHICGNTKHLIEDMGK-SGAWGLSLDSAVDLKWASEIVPSDVRLIGNLDPVKVFLQG 269
Query: 298 NQVMI 302
N MI
Sbjct: 270 NPEMI 274
>gi|219851930|ref|YP_002466362.1| Uroporphyrinogen decarboxylase (URO-D) [Methanosphaerula palustris
E1-9c]
gi|219546189|gb|ACL16639.1| Uroporphyrinogen decarboxylase (URO-D) [Methanosphaerula palustris
E1-9c]
Length = 337
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 28/298 (9%)
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
++ + RY +DA D V +A G + + +N+ P + + Y L+ + D N
Sbjct: 52 IRALDRYGYDAVFALMDTSVETEAAGSVLTYFKNKYPIV------KSYALSQDTDPD-NL 104
Query: 120 LLP----------IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+P + + ILR+++ + + ++G P T+A+ ++ Q
Sbjct: 105 SVPDPHQAGRMPALLNAAGILREEIGDEVLVVGCVLGPLTLATQLLG------IEQALYL 158
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVG 227
A + F +LDF +DV + AQI AGV + +FD A + F + +
Sbjct: 159 AIDDPEQFGRVLDFATDVVIRFGTAQIEAGVHLPVVFDPSASPAVIPPMFFYEFEVPRLT 218
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ S+++ A ++ A G +L Y + D+SV A E + G
Sbjct: 219 RLFSSLKEHGAVANWLHIAGSVGSILPFYPE-AGVDIANFDYSVNPLDAQEALPRTVLDG 277
Query: 288 NLDPMRLVVG--NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
N+ P V ++ + + G FI + G I + +NV+ LV R+
Sbjct: 278 NIRPWSFVEAPPEEITRESSRLMDRFAHRGGFILSSGCEIPLESRQENVMALVMAART 335
>gi|213622180|ref|ZP_03374963.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 43
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALG 85
+C E E+TLQP+RRY DAAILFSDIL I DA+G
Sbjct: 2 LCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMG 39
>gi|21542151|sp|O30640|MTBA_METBA RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|2342551|gb|AAC38632.1| methylcobamide:CoM methyltransferase isozyme A [Methanosarcina
barkeri]
Length = 339
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 136/349 (38%), Gaps = 39/349 (11%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHT------------ 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPITTQEIYLLNP--NIDLFLNYL 120
F+A + DI A+ G ++ + + P + + + + L N +L +
Sbjct: 63 -VVGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K + +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGN-------LFTGEEVVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I+ A+ ++
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAM-KELD 233
Query: 239 NAKFISFA----KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
A + G G M K T N I +D V + A K + GNLDP+
Sbjct: 234 VATVLHICGNTTNGLGIMDK-----TGVNGISVDQKVDIKTATGSVKNAIIVGNLDPVA- 287
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHG---ITPQVDPKNVLDLVKT 340
V+ N + A L +G + +G G +TP V+ + +++ K+
Sbjct: 288 VLWNGTPEEIAEASKKALDAGVGLLTVGCGTVSMTPTVNLQKMIECAKS 336
>gi|73668382|ref|YP_304397.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|1107728|emb|CAA62996.1| methylcobalamin: Coenzyme M methyltransferase (isoenzyme II)
[Methanosarcina barkeri]
gi|72395544|gb|AAZ69817.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
gi|1587219|prf||2206339B methylcobalamin/coenzyme M methyltransferase
Length = 339
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 136/349 (38%), Gaps = 39/349 (11%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHT------------ 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPITTQEIYLLNP--NIDLFLNYL 120
F+A + DI A+ G ++ + + P + + + + L N +L +
Sbjct: 63 -VVGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K I +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKEIPIIGSMIGPFSLAQHINGDAWFGN-------LFTGEEIVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I+ A+ ++
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAM-KELD 233
Query: 239 NAKFISFA----KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
A + G G M K T N I +D V + A K + GNLDP+
Sbjct: 234 VATVLHICGNTTNGLGIMDK-----TGVNGISVDQKVDIKTATGNVKNALIVGNLDPVA- 287
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHG---ITPQVDPKNVLDLVKT 340
V+ N + VL +G + +G G +TP V+ + +++ K+
Sbjct: 288 VLWNGTPEEIAEVSKKVLDAGVGLLTVGCGTVSMTPTVNLQKMIECAKS 336
>gi|298674882|ref|YP_003726632.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287870|gb|ADI73836.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNER ++ L+G ++ P + Q + E I + D PE L++
Sbjct: 4 MNER---LINALKGEEVDKKPAVSVTQTA--IVELMDITGA--EWPDAHSDPEKMATLSM 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+ N +A + V+A+ALG V +N P + D ++I L DL+
Sbjct: 57 ASHEQGNLEAIRNPFCLTVLAEALGCGVNMGTKNRQPSITDHPYPKDISDLKMPDDLYNT 116
Query: 119 YLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRA 176
+P +F+S I++ K + + LI P T+AS ++S F+K ++ +
Sbjct: 117 GRIPAVFESSKIIKDKYGDEVPLISGLEGPATLASDLVSPKSFMK-------WSIKKPDN 169
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVR 234
F+ ++DF +D EY ++ G DV+ + D A L ++F+N + R V+
Sbjct: 170 FDAIMDFATDACIEYANGMVNNGADVVCVADPVASPDLLSPNDFDNRIKPRLQRFAEEVK 229
>gi|290766190|gb|ADD60151.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 118
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
+ R F ++ A + LL L D +L+ QI AG ++Q+FD+ AG LG F +
Sbjct: 8 KARRFLVEHPEASHQLLGMLKDAVTRHLVHQIKAGAQIVQVFDSFAGELGPSLFSKFELP 67
Query: 225 SVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+ +I V+ + + FAK A + ++ + + + +GLDW
Sbjct: 68 ILRQIAKGVKEQLKEMNIDPVPMVVFAKDAHFAIEELSK-SGYDVVGLDWCT 118
>gi|21227541|ref|NP_633463.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|22095919|sp|P58984|MTBA_METMA RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|20905921|gb|AAM31135.1| Methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 339
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 25/244 (10%)
Query: 112 NIDLFLNYLL------PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD--H 163
++D NY L I +++ IL +K + +IG P+++A ++ + +
Sbjct: 107 DLDKIKNYSLDTGRIGTILKAVKILSEKYGKELPVIGSMIGPFSLAQHINGDAWFGNLFT 166
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENY 221
G++ V A LLDF +D + Y A + G D I I D A +G +E Y
Sbjct: 167 GEDIVPA---------LLDFCADFNIAYAKAMVENGADTIAIIDPTASYELIGGEFYEKY 217
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
A +I+ A+ ++ A + L R T NAI +D V + A +
Sbjct: 218 ALPYQKKIVDAM-KELDVATVLHICGNTTNGLAIMDR-TGVNAISVDQRVDIKTATGNVE 275
Query: 282 EGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLDLV 338
+ GNLDP+ V+ N D A VL +G I +G GI TP + + +++
Sbjct: 276 NAIIVGNLDPVA-VLWNGTPEDVEAASKKVLDAGVGILTVGCGIVSMTPSANLQKMVECA 334
Query: 339 KTVR 342
K R
Sbjct: 335 KNYR 338
>gi|213622166|ref|ZP_03374949.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 145
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRRLTDSNAIGL 267
G L +++ ++ + +I+ + R+ + F KG G L+ T +A+GL
Sbjct: 2 GGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGL 60
Query: 268 DWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGI 325
DW+ ++ A + + +QGN+DP L + D V IL G G +FNLGHGI
Sbjct: 61 DWTTDIADARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILAGFGQGEGHVFNLGHGI 120
Query: 326 TPQVDPKNVLDLVKTVR 342
V P++ V+ V
Sbjct: 121 HQDVPPEHAGAFVEAVH 137
>gi|207111362|ref|ZP_03245524.1| uroporphyrinogen decarboxylase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 46
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
L EY++ RKK +FL++C + E+TLQP+ DAAILFSDI
Sbjct: 1 LSEYQESRKKTGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDI 46
>gi|254445349|ref|ZP_05058825.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198259657|gb|EDY83965.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 455
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 43 KNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DP 100
K++L+ + E+ V +RY D + D+ + A+ LG + + + P + P
Sbjct: 38 KDYLE---STEHIVSGLKASAKRYRPDGLPVVFDLQLEAEVLGCQLAWAQETPPAVISHP 94
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ P + + L Q+I +K+L I L G P T+A ++ +
Sbjct: 95 LDAGYAIKALPTLSVEKGRLPLALQAIRETKKELGEEIALYGLLTGPLTLALHLRGDDVL 154
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFEN 220
D + LLD+ ++++ + + A + AG+DVI + D +G F +
Sbjct: 155 LDM-------FDEEEGVVALLDYCAEIANQMVDAYLDAGIDVIAVVDPMISQIGPSHFTD 207
Query: 221 YAARSVGRIISAVRRK 236
+ A + + S VR+K
Sbjct: 208 WVAPRLDEVFSYVRKK 223
>gi|1061406|gb|AAC44214.1| methylcobamide:CoM methyltransferase isozyme A [Methanosarcina
barkeri]
Length = 339
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 134/345 (38%), Gaps = 31/345 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHT------------ 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPITTQEIYLLNP--NIDLFLNYL 120
F+A + DI A+ G ++ + + P + + + + L N +L +
Sbjct: 63 -VVGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K + +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGN-------LFTGEEVVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I A+ ++
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIADAM-KELD 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
A + L+ + T N I +D V + A K + GNLDP+ V+ N
Sbjct: 234 VATVLHICGNTTNGLEIMDK-TGVNGISVDQKVDIKTATGSVKNAIIVGNLDPVA-VLWN 291
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHG---ITPQVDPKNVLDLVKT 340
+ A L +G + +G G +TP V+ + +++ K+
Sbjct: 292 GTPEEIAEASKKALDAGVGLLTVGCGTVSMTPTVNLQKMIECAKS 336
>gi|213417205|ref|ZP_03350349.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 56
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPE 53
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAE 54
>gi|219558688|ref|ZP_03537764.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 62
Score = 50.4 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
P+W MRQAGR LPEYR +R+++ + L C+ P+ E+T
Sbjct: 25 PVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVACEIT 62
>gi|20089044|ref|NP_615119.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|21542152|sp|P58869|MTBA_METAC RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|19913902|gb|AAM03599.1| methylcobalamin:CoM methyltransferase isozyme A [Methanosarcina
acetivorans C2A]
Length = 339
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 14/226 (6%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++I IL +K + +IG P+++A ++ + + + LLD
Sbjct: 124 ILEAIKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGN-------LFTGEEIVPALLD 176
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR-KYPN 239
F SD + Y A + G D I I D A +G +E YA +I+ A++
Sbjct: 177 FCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAMKELDVGT 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I G + + T N I +D V + A + + + GNLDP+ ++ N
Sbjct: 237 VLHICGNTTNGLSIMDK---TGVNGISVDQRVDIKTATDNVENAIIIGNLDPVA-ILWNG 292
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D A VL G + + G GI N+ +V+ ++ K
Sbjct: 293 TPEDVAEASKKVLDVGVGLLSPGCGIVSMTPSANLQKMVECAKNYK 338
>gi|261884843|ref|ZP_06008882.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 86
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 272 PLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
PL A E L +QGN++P RL + DGV+ IL ++ IFNLGHGI P V
Sbjct: 8 PLKMAKETLGSRYVLQGNMEPTRLY-SKDAIDDGVDEILSIMRGHRHIFNLGHGILPDVP 66
Query: 331 PKNVLDLVKTVRSE 344
+N +K+V+ +
Sbjct: 67 VENAKYFIKSVQEK 80
>gi|308125695|ref|ZP_07663483.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
gi|308115554|gb|EFO53094.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
Length = 146
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L + + +
Sbjct: 39 FTKNGGMWLEQIA-ATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYASPERIRE 97
Query: 304 GVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 98 EVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 139
>gi|217967122|ref|YP_002352628.1| uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
gi|217336221|gb|ACK42014.1| Uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
Length = 319
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYL 120
+ R+N D F D+ V A+ALG + F ENE P R PI +E ++
Sbjct: 44 LERFNPDGIFPFMDLTVEAEALGLKIDFPENENPSVREHPIKDREALAELKRKWNGISGR 103
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +F + + K + I G+ P+T+A ++ + D G N + +
Sbjct: 104 MKVFIKVCEMMVKEFDRIKG-GYVIGPFTLAGELMG---VNDLGIN---VLEEPEFVKEV 156
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++F + V EY G+DV+ + + A L F+ ++ + + S ++R
Sbjct: 157 VEFTTKVILEYAKVLFETGIDVVAVLEPTAVILSPQLFKEFSMKYFKYLSSEIKRPL--- 213
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+++++ + + + + LD +V L +A E+ + + GNLDP+
Sbjct: 214 -IYHICGNTKHLIEDMGK-SGAWGLSLDSAVDLKWASEIVPSKVNLIGNLDPV 264
>gi|167950693|ref|ZP_02537767.1| HemE protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 79
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+R++L + LIGF G+PWT+A+YM+ GG K+ Q + + + LL ++D
Sbjct: 6 IRRELDGRVPLIGFSGSPWTLATYMVEGGGTKNFAQVKGMMFDRPELMHQLLSRVAD 62
>gi|269964308|ref|ZP_06178562.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269830956|gb|EEZ85161.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 129
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L + + +
Sbjct: 22 FTKNGGMWLEQIA-ATGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYASPERIRE 80
Query: 304 GVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 81 EVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHE 122
>gi|300855092|ref|YP_003780076.1| uroporphyrinogen decarboxylase-like protein [Clostridium
ljungdahlii DSM 13528]
gi|300435207|gb|ADK14974.1| uroporphyrinogen decarboxylase related protein [Clostridium
ljungdahlii DSM 13528]
Length = 343
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAP-WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L+ K N + +IG P T +S M F K+ ++ A++ L
Sbjct: 125 VIDAIKLLKSKR-NDVPIIGNLTGPISTTSSIMEPSTFYKELKKSNKEAHE-------FL 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPN 239
+F++D ++ Q+ AG D+I I D LG FE +A + + +II +V+++
Sbjct: 177 NFVTDELIKFAKKQMEAGADIIAISDPSGTGEILGPKLFEEFAVKYINKIIESVKKENKG 236
Query: 240 AKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ G M K Y + SNA+ D V +S A + K+ + GN+ + G
Sbjct: 237 ----TIVHICGQMKKVYLEVNKVKSNALSFDSIVNMSDARKNLKDRVLMGNVSTYAIEFG 292
Query: 298 ---------NQVMIDGVNAILDVLGSG 315
+ + DG N I G G
Sbjct: 293 EAKKIAELTEKCVKDGSNIISPACGLG 319
>gi|226328702|ref|ZP_03804220.1| hypothetical protein PROPEN_02597 [Proteus penneri ATCC 35198]
gi|225201888|gb|EEG84242.1| hypothetical protein PROPEN_02597 [Proteus penneri ATCC 35198]
Length = 99
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 10/80 (12%)
Query: 84 LGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+G + F EGPR PI + Q++ + +P +L Y++ ++ +R L +
Sbjct: 1 MGLGLYFETGEGPRFKSPIKSLADIQKLPIPDPEDEL--GYVM---NAVRAIRHALQGSV 55
Query: 139 TLIGFCGAPWTVASYMISGG 158
LIGF G+PWT+A+YM+ GG
Sbjct: 56 PLIGFSGSPWTLATYMVEGG 75
>gi|330813368|ref|YP_004357607.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486463|gb|AEA80868.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 93
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ + +D + ++ L+ + K+ +QG +DP L ++M ++ L+ S +IFNL
Sbjct: 10 DGLSIDSKIDVNLILKKIGKKITIQGGMDPKYLNSKKKLMEKKIHFYLNKFKSRNYIFNL 69
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHG+ + P V LVK VRS
Sbjct: 70 GHGVPKETSPSTVHKLVKVVRS 91
>gi|1061404|gb|AAC44213.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
barkeri]
Length = 339
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 41/223 (18%)
Query: 5 KQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K ++L L+G ++ P+ LM + G PE PE
Sbjct: 7 KTRLLAALEGKPVDKVPVCSVTQTGIVELMDEVGAAWPEAHT-------------NPELM 53
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLN---- 110
+L + +A L + V+ +A+G + N G + P T Y N
Sbjct: 54 AKLAIANYELSGLEAVRLPYCLTVLGEAMGCEI----NMGTKNRQPSVTASPYPKNLDGA 109
Query: 111 --PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNR 167
P L N + + ++I I+R+K+ + +IG P T+AS +IS F+K
Sbjct: 110 AVPADLLQRNRIPAVLEAIKIVREKVGPDVPIIGGMEGPVTLASDLISVKSFMK------ 163
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
++ + + F LD ++ + Y A + AG DVI I D A
Sbjct: 164 -WSIKKTDLFEQALDISTEAAIAYANAMVEAGADVIAIADPVA 205
>gi|207111140|ref|ZP_03245302.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPKX_438_CA4C1]
Length = 64
Score = 46.6 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+QGNL+P RL + +GV IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 5 LQGNLEPTRLY-DKSALEEGVERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 63
>gi|307267091|ref|ZP_07548603.1| Uroporphyrinogen decarboxylase (URO-D) [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917880|gb|EFN48142.1| Uroporphyrinogen decarboxylase (URO-D) [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 308
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 29/283 (10%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQE----IYLLNPNIDLFL 117
++N DA + D+ V A+ALG + ENE + PIT E + + NP
Sbjct: 32 EKFNPDAVLYMMDLSVEAEALGLKINKPENESYTVSEHPITNIEELRKLKIPNP----LK 87
Query: 118 NYLLPIFQSIS-ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ +P+F ++ + K+ P+ + I + P+T+ M +N V
Sbjct: 88 DGRMPLFVEVTKKMAKEFPD-VPKIAYVIGPYTLVGLMTG-------AENTVINSMMEVE 139
Query: 177 F-NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
F + L+F +V Y A I AG D + I + A L FE ++ V ++ +
Sbjct: 140 FVHEELNFAVEVIKRYGDALIEAGADALCILEPTATVLSPAMFEEFSGNYVKQL-----K 194
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRL 294
KY N I G L T + + LD V L ++ + GNL+P+
Sbjct: 195 KYWNYPTILHICGNTTHLIPSMVKTGCDGLSLDSDVSLRDVKFQIPDGVLIIGNLNPVST 254
Query: 295 VV---GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
V QV + I D+ F+ + G I D +N+
Sbjct: 255 VAYGKREQVEKEIRRLIEDMKDKKHFVLSSGCDIPGDADLENI 297
>gi|73671068|ref|YP_307083.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|72398230|gb|AAZ72503.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
Length = 339
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MNE K+++L L+G ++ P+ + Q G + K + + PE L
Sbjct: 1 MNEMALKERLLNALEGKEVDKVPVCSVTQTGIV----ELMDKVGAPWPEAHSDPEKMATL 56
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD----PITTQEIYLLNPNI 113
+ +A + + V+A+A+G V +N P + P + + + + P
Sbjct: 57 AIANYELSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKSLEGMEM--PEN 114
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQ 172
L + + + SI I+R+++ + +IG P T+AS + S F+K ++ +
Sbjct: 115 LLDMGRIRTVLDSIKIIRERVGPDVPIIGGMEGPVTLASDLASVKSFMK-------WSVK 167
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
+ +LDF +D + Y + + AG DVI + D A
Sbjct: 168 KPDLLHQVLDFATDATIAYANSMVVAGADVISVADPVA 205
>gi|256003073|ref|ZP_05428065.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|255992764|gb|EEU02854.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|316939430|gb|ADU73464.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
1313]
Length = 355
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 148/380 (38%), Gaps = 90/380 (23%)
Query: 5 KQKILEVLQGNVINPPPIW------------LMRQAGRYLPE-----------YRQIRK- 40
K++IL VL+ ++ PP+ +M+ G LPE R + K
Sbjct: 7 KERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAHHDDRLMAELSRDVHKY 66
Query: 41 -KFKNF-LDMCYTPEYTV--------ELTLQP-IRRYNFDAA--ILFSDILVIADALGRN 87
F+NF + C T E V L +P I + FD+ +++ DI G+
Sbjct: 67 TGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDSVSNVVYQDI-------GKM 119
Query: 88 VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP 147
++ R++ + +L N D+ P+ +++ G
Sbjct: 120 LK-----KGRIESVIQAAWHLSKKNKDI------PVVGNLT----------------GPL 152
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
T AS + F+K+ +++ A+ R N++ DFL EY I GVD+I I D
Sbjct: 153 STSASIVDPVTFLKELRKDKENAH---RVINYVTDFL----IEYAKLMIENGVDLISIGD 205
Query: 208 THAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI 265
A LG FE YA R + +++ + NA I G +K + S+AI
Sbjct: 206 PTATGEILGPKMFEEYAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAI 263
Query: 266 GLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
D + L L+ E P GNL L G + + +L G I +
Sbjct: 264 STDAMINLR---ALKDEFPSLTTMGNLSTFLLQFGTPEKV--ADQTERLLRDGIDIISPA 318
Query: 323 HGITPQVDPKNVLDLVKTVR 342
G++ +N+ L KTV+
Sbjct: 319 CGLSTTSSIQNIKALTKTVK 338
>gi|294495642|ref|YP_003542135.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
gi|292666641|gb|ADE36490.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
Length = 339
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 4 RKQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEY 54
+K ++ L+G ++ P+ LM G PE K +T
Sbjct: 6 QKTRLTNALKGESVDKAPVASVTQTATVELMEMTGASWPEAHSDASKMAKLALASHT--- 62
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD--PITTQEIYLLNP 111
E L+ +R Y F + V+A+A+G V +N P + P T L P
Sbjct: 63 --EAGLEAVR-YPFC-------LTVLAEAMGCEVNMGTQNRQPSITEHPYTKGTDDLKMP 112
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFA 170
+ L + + ++ I+R + + +I P T+AS + S F+K ++
Sbjct: 113 DNLAKLGRIPAVVETTGIVRDSVGEDVPIIAGMEGPVTLASDLASVKKFMK-------WS 165
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
+ FN +LDF +D EY + +GVD+I + D
Sbjct: 166 IKKPDDFNTILDFATDACIEYANILLDSGVDMICVAD 202
>gi|325663327|ref|ZP_08151777.1| hypothetical protein HMPREF0490_02518 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086889|ref|ZP_08335966.1| hypothetical protein HMPREF0987_02269 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325470781|gb|EGC74011.1| hypothetical protein HMPREF0490_02518 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330410055|gb|EGG89490.1| hypothetical protein HMPREF0987_02269 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 358
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISG-GFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I IL++K + + +IG P +VAS +I GF KD +++ A+Q +
Sbjct: 125 VLDAIRILKEKNLD-VPIIGNLVGPVSVASSVIDPVGFYKDLRRHKEEAHQ-------FM 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPN 239
F+++ + A I G DVI I D LG FE YA + + ++ ++ +
Sbjct: 177 TFVTEQLIAFANAMIENGADVIAISDPSGTGEILGPKFFEEYAVKYLNMLLDGIKDQEKG 236
Query: 240 AKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ G M Y ++ S+A+ D VPL A + ++ + GN+ L G
Sbjct: 237 ----TIVHICGQMRSVYEQIDKVHSDALSFDAIVPLKEARKNLQDRVLMGNVSTFALEFG 292
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ + + + SG I + G+ + N+ ++KT++ ++
Sbjct: 293 DEERVQKLTKF--CVQSGSDIISPACGLGTKSPLANIQAILKTLKMDE 338
>gi|325264042|ref|ZP_08130774.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Clostridium sp.
D5]
gi|324030526|gb|EGB91809.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Clostridium sp.
D5]
Length = 338
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 120/293 (40%), Gaps = 14/293 (4%)
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT--QEIYLLNPNI 113
E L+ +Y+ DA + SD + A G V F EN+ P P+ T Q+I L
Sbjct: 49 EGMLRCYEKYHLDALSVCSDPMREAGGFGAEVVFPENDVPYSPVPLITGCQDIGRLKITE 108
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ +++ +L+ + N + +IG W + S + D
Sbjct: 109 PASSRRMNDRLEAVRLLKSRTGNEVPVIG-----WVEGAVAESCDLM-DVSNCLCEMLDE 162
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
A + LL + + + AQ+ AG D+I I D +G +E +A ++IS +
Sbjct: 163 PEAMHELLTICLEQAELFARAQLEAGADIIGIGDAACSLIGPDLYEEFALPYQQKLISRI 222
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPM 292
K + +L + T ++ + LD+ V L A ++ E + GN DP+
Sbjct: 223 HDAGGKVK-LHICGNLNPVLHLVAK-TGADIVDLDYMVDLRKACDIFPETSCLNGNFDPV 280
Query: 293 RLVV-GNQVMID-GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++++ G+ ID V L G + + G + P+N+ ++ + S
Sbjct: 281 QILLQGDIKTIDRAVKECLACAGLHRTMISAGCEVPTFTPPENLEEVWHVLSS 333
>gi|296187952|ref|ZP_06856344.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|296047078|gb|EFG86520.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 343
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L+ K + +IG P + AS ++ F K+ ++ A++ L
Sbjct: 125 VIDAIKLLKSK-GTDVPIIGNLTGPISTASSIMEPSTFYKELKKSNKEAHE-------FL 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPN 239
+F++D + QI AG D+I I D LG FE +A + + +II +V+++
Sbjct: 177 NFVTDELITFAKKQIEAGADIIAISDPSGTGEILGPKLFEEFAVKYINKIIESVQKENK- 235
Query: 240 AKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ G M + Y + SNA+ D V +S A + K+ + GN+ + G
Sbjct: 236 ---CTIVHICGQMKRVYSEVNKVKSNALSFDSIVNMSDARKNLKDRVLMGNVSTYAIEFG 292
Query: 298 ---------NQVMIDGVNAILDVLGSG 315
+ + DG N I G G
Sbjct: 293 EANKIAELTEKCVKDGSNIISPACGLG 319
>gi|289808607|ref|ZP_06539236.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 90
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFN 320
+A+GLDW+ ++ A + + +QGN+DP L + D V IL G G +FN
Sbjct: 1 DALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILAGFGQGEGHVFN 60
Query: 321 LGHGITPQVDPKNVLDLVKTV 341
LGHGI V P++ V+ V
Sbjct: 61 LGHGIHQDVPPEHAGAFVEAV 81
>gi|255525343|ref|ZP_05392282.1| methyltransferase MtaA/CmuA family [Clostridium carboxidivorans P7]
gi|255510914|gb|EET87215.1| methyltransferase MtaA/CmuA family [Clostridium carboxidivorans P7]
Length = 342
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L+ K + +IG P + AS ++ F K+ ++ A++ L
Sbjct: 124 VIDAIKLLKSK-GTDVPIIGNLTGPISTASSIMEPSTFYKELKKSNKEAHE-------FL 175
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPN 239
+F++D + QI AG D+I I D LG FE +A + + +II +V+++
Sbjct: 176 NFVTDELITFAKKQIEAGADIIAISDPSGTGEILGPKLFEEFAVKYINKIIESVQKENK- 234
Query: 240 AKFISFAKGAGYMLKNYRRLT--DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ G M + Y + SNA+ D V +S A + K+ + GN+ + G
Sbjct: 235 ---CTIVHICGQMKRVYSEVNKVKSNALSFDSIVNMSDARKNLKDRVLMGNVSTYAIEFG 291
Query: 298 ---------NQVMIDGVNAILDVLGSG 315
+ + DG N I G G
Sbjct: 292 EANKIAELTEKCVKDGSNIISPACGLG 318
>gi|125975268|ref|YP_001039178.1| methylcobalamin:coenzyme M methyltransferase [Clostridium
thermocellum ATCC 27405]
gi|125715493|gb|ABN53985.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Clostridium thermocellum ATCC 27405]
Length = 355
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 147/380 (38%), Gaps = 90/380 (23%)
Query: 5 KQKILEVLQGNVINPPPIW------------LMRQAGRYLPE-----------YRQIRK- 40
K++IL VL+ ++ PP+ +M+ G LPE R + K
Sbjct: 7 KERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAHHDDRLMAELSRDVHKY 66
Query: 41 -KFKNF-LDMCYTPEYTV--------ELTLQP-IRRYNFDAA--ILFSDILVIADALGRN 87
F+NF + C T E V L +P I + FD+ +++ DI G+
Sbjct: 67 TGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDSVSNVVYQDI-------GKM 119
Query: 88 VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP 147
++ R++ + +L N D+ P+ +++ G
Sbjct: 120 LK-----KGRIESVIQAAWHLSKKNKDI------PVVGNLT----------------GPL 152
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
T AS + F+K+ ++ A+ R N++ DFL EY I GVD+I I D
Sbjct: 153 STSASIVDPVTFLKELRKDNENAH---RVINYVTDFL----IEYAKLMIENGVDLISIGD 205
Query: 208 THAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI 265
A LG FE YA R + +++ + NA I G +K + S+AI
Sbjct: 206 PTATGEILGPKMFEEYAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAI 263
Query: 266 GLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
D + L L+ E P GNL L G + + +L G I +
Sbjct: 264 STDAMINLR---ALKDEFPYLTTMGNLSTFLLQFGTPEKV--ADQTQRLLRDGIDIISPA 318
Query: 323 HGITPQVDPKNVLDLVKTVR 342
G++ +N+ L KTV+
Sbjct: 319 CGLSTTSSIQNIKALTKTVK 338
>gi|330893618|gb|EGH26279.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 46
Score = 45.1 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
+ + L L ++ P+W+MRQAGRYLPEYR R +F
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDF 46
>gi|270488928|ref|ZP_06206002.1| uroporphyrinogen decarboxylase domain protein [Yersinia pestis KIM
D27]
gi|270337432|gb|EFA48209.1| uroporphyrinogen decarboxylase domain protein [Yersinia pestis KIM
D27]
Length = 97
Score = 44.7 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
T +A+GLDW+ ++ A + + +QGN+DP L + V+ IL G G
Sbjct: 4 TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLYAPPARIEQEVSTILASFGQGEGH 63
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
+FNLGHGI V P + V V +
Sbjct: 64 VFNLGHGIHQDVPPAHAGAFVNAVHA 89
>gi|226328701|ref|ZP_03804219.1| hypothetical protein PROPEN_02596 [Proteus penneri ATCC 35198]
gi|225201887|gb|EEG84241.1| hypothetical protein PROPEN_02596 [Proteus penneri ATCC 35198]
Length = 80
Score = 44.7 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
M+E K + L L ++ P+W+MRQAGRYLPEY++ R + F
Sbjct: 5 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGGF 50
>gi|294494963|ref|YP_003541456.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
gi|292665962|gb|ADE35811.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
Length = 342
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 143/360 (39%), Gaps = 48/360 (13%)
Query: 5 KQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K+++ V +G ++ P + M G Y PE + K + +T
Sbjct: 7 KERLARVFEGKEVDRMPAICATQTGTVEQMDAVGAYWPEAHEDPVKMAALAEAGHT---- 62
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
F+A + DI A+ G ++ E P + +++
Sbjct: 63 ---------VVGFEAVRVPFDITAEAEFFGCGIKPSTKE---QQPSVISHVVSKAEDLEQ 110
Query: 116 FLNYLLP------IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
F Y + + +++ IL K + + +IG P+++A ++ + + ++ F
Sbjct: 111 FEGYNIEDGRIGNVCEAVKILSDKYGDELPIIGSMIGPFSLAQHLNGDSWFMNIMTDQEF 170
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+ L++F ++ +Y + Q+ G D I D A +G ++ +
Sbjct: 171 GLK-------LMEFTTEFCTQYALKQVENGADTFAIIDPTASYQLIGADFYKTFVVPFHQ 223
Query: 228 RIISAVRRK-YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ 286
+I+ A+ K P+ I G + +AI +D +V + A+E + +
Sbjct: 224 KIVEALHEKGIPSILHICGDTTNGLAI---METCGVDAISVDQNVDPAAAVENVDKALIL 280
Query: 287 GNLDPMRLVVGNQVM--IDGV-NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GNLDP+ V+ NQ ++GV +VL +G + G GI + +N+ +++ ++
Sbjct: 281 GNLDPVS-VLWNQGEDNVEGVKEESKNVLDAGVQLLAPGCGIVSKTPTQNLQAMIEAAKN 339
>gi|83590928|ref|YP_430937.1| methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
gi|83573842|gb|ABC20394.1| Methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
Length = 338
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ IL+K+ +H+ L+G PWT+ SY + G ++ + R F LD
Sbjct: 123 VLEALKILKKEYGDHVCLVGKVMGPWTL-SYHLHG--VQKFLIKTILEPDKVRRF---LD 176
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
L D++ ++ AQ AG DV+ + D G L
Sbjct: 177 KLKDLAVKFANAQFAAGADVVTVADHATGDL 207
>gi|213615620|ref|ZP_03371446.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 46
Score = 43.9 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
+ + L L ++ P+W+MRQAGRYLPEY+ R + +F
Sbjct: 5 KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDF 46
>gi|288573954|ref|ZP_06392311.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569695|gb|EFC91252.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 364
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 25/253 (9%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQ 104
+ P + + RR+ D A +F+D+ +A+A+G ++F +++ P +D ++
Sbjct: 49 HDPRALADAVIATHRRFGGDGAKVFTDLFTVAEAMGAKIKFPDDDTADLLEPAIDDVS-- 106
Query: 105 EIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
I L P ID +P +++ ++ ++ + + P+T A ++I G K
Sbjct: 107 RIDELEP-IDPEKACRIPTHLKAMEMVVDEISSEVPCTALVVGPFTTAFFLI--GVEK-- 161
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENY 221
R+ ++ ++ + L + + Y+ A G+ I I + + C + F Y
Sbjct: 162 -MTRLM-VRDPQSVDRLCQVSLESTLRYVDAAASRGMG-ISIAEPLSSCTVVSPKHFRRY 218
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFAL-E 278
AA VG++++ ++ K K G + L D NA+ +D VPL + +
Sbjct: 219 AAPVVGKLLNHIKDKGMGTSMHICGKTDGI----WEDLADMGLNALSIDNVVPLPGCVSK 274
Query: 279 LQKEGPVQGNLDP 291
+ + G +DP
Sbjct: 275 VGDRMKIMGKVDP 287
>gi|296132005|ref|YP_003639252.1| methyltransferase MtaA/CmuA family [Thermincola sp. JR]
gi|296030583|gb|ADG81351.1| methyltransferase MtaA/CmuA family [Thermincola potens JR]
Length = 349
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
KQ++L +L+G ++ P + +G ++ NF D + PE L P
Sbjct: 7 KQRVLGLLKGETVDRPACY----SGTGTVWGAALKHYGYNFADAHHDPEKMARLATFPFE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNI-------DLFL 117
F+ A++ DI V A+ LG ++ + N + P + + ++ PN D +
Sbjct: 63 AAGFECALMPFDICVEAELLGCDINYFSNSDESIYPNIKKRL-IMKPNEIEGVEVPDHVM 121
Query: 118 NYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+P+ +I + + HI + P+T+A++++ D + + ++
Sbjct: 122 GGRVPVVCNAIRQAKAEFGQHIPIGAHILGPFTLATHLM------DFNELLMTVFRKPDL 175
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVI 203
+ LL+ L+ V A AG D I
Sbjct: 176 VSGLLEKLAGVLMNVARAYEEAGADYI 202
>gi|288575192|ref|ZP_06393548.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568474|gb|EFC90032.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 343
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 111/253 (43%), Gaps = 25/253 (9%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQ 104
+ P + + RR+ D A +F+D+ +A+A+G ++F +++ P +D ++
Sbjct: 28 HDPRALADAVIATHRRFGGDGAKVFTDLFTVAEAMGAKIKFPDDDTADLLEPAIDDVS-- 85
Query: 105 EIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
I L P ID +P +++ ++ ++ + + P+T A ++I G K
Sbjct: 86 RIDELEP-IDPEKACRIPTHLKAMEMVVDEISSEVPCTALVVGPFTTAFFLI--GVEK-- 140
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENY 221
R+ ++ ++ + L + + Y+ A G+ I I + + C + F Y
Sbjct: 141 -MTRLM-VRDPQSVDRLCQVSLESTLRYVDAAASRGMG-ISIAEPLSSCTVVSPKHFRRY 197
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFAL-E 278
AA VG++++ ++ K K G + L D NA+ +D VPL + +
Sbjct: 198 AAPVVGKLLNHIKDKGMGTSMHICGKTDGI----WEDLADMGLNALSIDNVVPLPGCVSK 253
Query: 279 LQKEGPVQGNLDP 291
+ + G +DP
Sbjct: 254 VGDRMKIMGKVDP 266
>gi|330893317|gb|EGH25978.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 41
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIR 39
+ + L L ++ P+W+MRQAGRYLPEYR R
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASR 40
>gi|309378190|emb|CBX23182.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 102
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 262 SNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIF 319
++A+GLDW+ + A + + +QGN DP L + + L G G +F
Sbjct: 11 ADALGLDWTCNIGEARRRVGDQVALQGNFDPSALFGTPESIRTEAARFLADYGQGSGHVF 70
Query: 320 NLGHGITPQVDPKNVLDLVKTV 341
NLGHGI DP++ LV TV
Sbjct: 71 NLGHGINQHADPEHAKILVDTV 92
>gi|220932369|ref|YP_002509277.1| methylamine-specific methylcobalamin coenzyme M methyltransferase
[Halothermothrix orenii H 168]
gi|219993679|gb|ACL70282.1| methylamine-specific methylcobalamin coenzyme M methyltransferase
[Halothermothrix orenii H 168]
Length = 448
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPIT-TQEIYLLNPNID-----LFL 117
Y D + D+ + A+ LG +++ E+ P + P++ ++E+ P D L L
Sbjct: 58 YRPDGQPVTFDLQIEAEILGCELKWSEDSPPTVISHPLSGSEEVPDRIPARDEGRIPLVL 117
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
N + +++++ L G P+T+AS++ D N + +
Sbjct: 118 NVM-------KKMKEEVGEKTALYGLLCGPFTLASHLRGTNLFMDMVLNPDYVKK----- 165
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+ + ++V+ I AG+DVI D + F+ + RS + + +R +
Sbjct: 166 --LMAYTTEVARAIASYYIEAGMDVIAAVDPMVSQISPEHFKEFLNRSYTELFAFIRDE- 222
Query: 238 PNAKFISFAKGAGYMLKNYRR--LTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL 294
F SF G KN LT+ ++I +D +V L A E+ K G V G P+
Sbjct: 223 --GAFSSFFV-CGNASKNIEEMCLTEPDSISVDENVSLPEAKEITDKHGIVIGGNIPLTT 279
Query: 295 VV--GNQVMIDGVNAILDVLGS 314
V+ GNQ D + +D+L S
Sbjct: 280 VMLHGNQQ--DNMKYTVDLLNS 299
>gi|257065294|ref|YP_003144966.1| methyltransferase, MtaA/CmuA family [Slackia heliotrinireducens DSM
20476]
gi|256792947|gb|ACV23617.1| methyltransferase, MtaA/CmuA family [Slackia heliotrinireducens DSM
20476]
Length = 341
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 129/320 (40%), Gaps = 59/320 (18%)
Query: 1 MNERKQKILEVLQGNVINPPP------------IWLMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++L L G + PP + L + G + PE
Sbjct: 1 MTTAKERLLATLDGKETDRPPCICPGGMMNMVTVGLQDEIGVFFPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIY 107
Y PE L R F+ + + V ++A+G V + ++P IT I+
Sbjct: 49 -YDPEKMAALAKAVYDRGFFENYGVPFCMSVESEAMGAEVTIGRKD---VEPHITGYAIF 104
Query: 108 LLN-----PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
++ +DL + ++I IL K + + ++G P +VAS ++ +K
Sbjct: 105 DVHDYKQVKPMDLESGRAKTVIEAIKIL-KTYDDGVPIVGNLVGPVSVASSVMDP--VKY 161
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFEN 220
+ Q Y+ + +DF+++ + +AQ+ AG DVI I D +G F+
Sbjct: 162 YKQ----LYKEKELSHAYMDFITNELIRFGLAQVEAGADVIAIADPSGTGEIMGPRSFDQ 217
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT--DSNAIGLDWSVPLSFALE 278
YA + ++ A++ +A + G M Y ++ NA+ D VP+ A
Sbjct: 218 YAVTYLEKLQKALQ----DAGARTIVHICGQMRSVYEQVAKISCNALSFDAVVPIKEA-- 271
Query: 279 LQKEGPVQGNLDPMRLVVGN 298
+ NL P R+V+GN
Sbjct: 272 -------RKNL-PGRVVMGN 283
>gi|281419257|ref|ZP_06250273.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
gi|281407123|gb|EFB37385.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
Length = 355
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 147/380 (38%), Gaps = 90/380 (23%)
Query: 5 KQKILEVLQGNVINPPPIW------------LMRQAGRYLPE-----------YRQIRK- 40
K++IL VL+ ++ PP+ +M+ G LPE R + K
Sbjct: 7 KERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAHHDDRLMAELSRDVHKY 66
Query: 41 -KFKNF-LDMCYTPEYTV--------ELTLQP-IRRYNFDAA--ILFSDILVIADALGRN 87
F+NF + C T E V L +P I + FD+ +++ DI G+
Sbjct: 67 TGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDSVSNVVYQDI-------GKM 119
Query: 88 VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP 147
++ R++ + +L N D+ P+ +++ G
Sbjct: 120 LK-----KGRIESVIQAAWHLSKKNKDI------PVVGNLT----------------GPL 152
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
T AS + F+K+ ++ A+ R N++ DFL EY I GVD+I I D
Sbjct: 153 STSASIVDPVTFLKELRKDNENAH---RVINYVTDFL----IEYAKLMIENGVDLISIGD 205
Query: 208 THAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI 265
A LG FE YA R + +++ + NA I G +K + S+AI
Sbjct: 206 PTATGEILGPKMFEEYAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAI 263
Query: 266 GLDWSVPLSFALELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
D + L L+ E P GNL L G + + +L G I +
Sbjct: 264 STDAMINLR---ALKDEFPYLTTMGNLSTFLLQFGIPEKV--ADQTQRLLRDGIDIISPA 318
Query: 323 HGITPQVDPKNVLDLVKTVR 342
G++ +N+ L KTV+
Sbjct: 319 CGLSTTSSIQNIKALTKTVK 338
>gi|167759801|ref|ZP_02431928.1| hypothetical protein CLOSCI_02164 [Clostridium scindens ATCC 35704]
gi|167662420|gb|EDS06550.1| hypothetical protein CLOSCI_02164 [Clostridium scindens ATCC 35704]
Length = 338
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 131/313 (41%), Gaps = 41/313 (13%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPE-YTVELTLQPI 63
K+++ V++GN ++ PP G + + + +D+ Y PE +T + +
Sbjct: 5 KERLYNVMKGNAVDRPPCIC---PGGMM---NMVTTDLMDAVDI-YMPETHTDARMMAGL 57
Query: 64 RRYNFDAAILFS-----DILVIADALGRNVRFVENEGPRM-DP------ITTQEIYLLNP 111
+ +D+ + + V A+ +G V G R+ +P I + E Y P
Sbjct: 58 AKAVYDSGCFENYGVPFCMTVEAEEMGAKVEM----GSRVYEPHVSAYAIESVEDYGKLP 113
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDHGQNRVFA 170
ID + +I ILR++ + + +IG P + AS ++ F K+
Sbjct: 114 RIDTGKGRAKVVLDAIRILREET-DGVPIIGNLTGPISTASSVMEPVVFYKE------LR 166
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGR 228
+N +A ++ DF++ + AQI AG DVI I D LG FE +A + +
Sbjct: 167 KKNKQAHAYM-DFITRQLISFGRAQIEAGADVIAISDPSGTGEILGPKYFEEFAVTYLNQ 225
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRR--LTDSNAIGLDWSVPLSFALELQKEGPVQ 286
++ ++ + K + G M Y+ + S+ + D VP+ A K+ +
Sbjct: 226 LLDGLQEE----KMGTIVHICGQMSPVYKEVNMVRSSVLSFDSVVPMKEARANLKDRVLM 281
Query: 287 GNLDPMRLVVGNQ 299
GN+ L G Q
Sbjct: 282 GNVSTFALEFGEQ 294
>gi|288932105|ref|YP_003436165.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
gi|288894353|gb|ADC65890.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
Length = 341
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 24/289 (8%)
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEG------PRMDPITTQEIYLLNPNIDLFLNY 119
Y F+ A+ D+ V A+ LG + F ++G P + E LN +
Sbjct: 61 YGFECAVAPFDLGVEAEVLGAEMNFYTHKGKEDIVYPTVKKKAINEPEDLNVPEKIEEKG 120
Query: 120 LLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+P + +++ I++K++ + + + P+T+A G I D + +++N N
Sbjct: 121 RVPLVLKALEIMQKRVGEEVPIATYILGPYTLA------GQIMDLEKLLKMSFKNPDRIN 174
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVRRK 236
LL L+D AE AG+D + + + A L F+N + + ++ K
Sbjct: 175 ELLSQLTDFLAELGRIYQDAGIDYLTVREMGAPTDVLSPRMFKNLILPHLKELF--LKLK 232
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM-RL 294
P I G M+ + + AI ++ ++ E L +E + GN+DP L
Sbjct: 233 EPTVLHIC---GDTNMIVELMWQSGATAISVEQKNDVAKTREKLGEEAIIFGNIDPYGTL 289
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+G D NA+ + G G I P V +N+L V+ V+
Sbjct: 290 VLGTPE--DIRNAVKKAIVGGVSSVWPGCDIWPAVSKENMLTFVEAVKE 336
>gi|255527426|ref|ZP_05394299.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296187455|ref|ZP_06855850.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|255508872|gb|EET85239.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296047977|gb|EFG87416.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 354
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI----- 101
+C+ + V+ + + + FD A + ++ IA+A+G + + +N+ P +D P
Sbjct: 45 LCFDYKLMVDTEINSYKTFGFDGAGIGPNLFGIAEAMGTTLAYPDNDMPYIDIPFLKNYD 104
Query: 102 TTQEIYLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGG-F 159
+++ +NP+ D LP+F ++ I+ +K+ + + + G P+T A+ + F
Sbjct: 105 DIKKLIPVNPHKD----GRLPLFLEACKIINEKIGSEVGVSSGLGGPFTTAASLRGTDVF 160
Query: 160 IKDHGQN-----RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
++D +N ++ FN+ +D +SD+ + +A+ A + VI
Sbjct: 161 LRDIIKNPEWVHKLLEISTESIFNY-IDAVSDIGVKPSLAEPVASLTVIS 209
>gi|302389278|ref|YP_003825099.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
gi|302199906|gb|ADL07476.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
Length = 340
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 20/276 (7%)
Query: 77 ILVIADALGRNVRF-VENEGPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
+ V A+ALG V E+ PR+ P+ E + P+I + + ++I IL++K
Sbjct: 77 MTVEAEALGAGVFIGTESTEPRVAEYPLKRVEEWENLPSITEDHYRVSIVLEAIRILKEK 136
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
P +IG P ++A+ +I + R + A +L DF++D +
Sbjct: 137 CP-ETPVIGNITGPISLATSLI-----EPMDFYRALRRKPDTALRFL-DFVTDNLIFFAK 189
Query: 194 AQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
A + AG D+I I D LG F A + +I AV A + G
Sbjct: 190 AMLKAGADIINIADPSGTGEILGPWAFSKVAVPYINKITDAVEASSGYA-MVHICGRLGS 248
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN--QVMIDGVNAIL 309
+L +L S I +D L E + + GN+ L G +V I V +I
Sbjct: 249 VLAELGKL-KSPVISIDALTGLRKVKESLPDKVIMGNVSTFLLEKGTPEKVAIAAVTSI- 306
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G I GI+P+ +N+ +V+ + E+
Sbjct: 307 ---KQGAGILAPACGISPRTPLENIRAMVRAAKGER 339
>gi|20093166|ref|NP_619241.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19918509|gb|AAM07721.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 342
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 114 DLFLNYLLP-IFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAY 171
DL +P + ++I I+R+K+ + +IG P TVAS ++S F+K ++
Sbjct: 117 DLLQKGRIPAVLEAIKIIREKVGPDVPIIGGMEGPITVASDLVSVKSFMK-------WSI 169
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENY 221
+ F LD + S Y A + AG D+I I D A + F+ Y
Sbjct: 170 KKPDLFEQSLDLATAASIAYANAMVEAGADIIAIADPVASPDLMSPDSFKQY 221
>gi|325261730|ref|ZP_08128468.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
gi|324033184|gb|EGB94461.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
Length = 362
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 26/289 (8%)
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE------IYLLNPNIDLFLNY 119
Y +DA + +DI A+G E E ++ +E + + NP
Sbjct: 80 YQWDAVGITTDIANEGMAIGSKYIRPEEETSKLTEYYLEELDEYERVKVTNP---WETEP 136
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
I ++ I++K++ + I + +C AP VAS +I + V + +
Sbjct: 137 TKTILRASEIVKKEIGDRIYVTAWCNAPLNVASQLIP------MEELLVGMLTDPETLHE 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKY 237
LL+ + Y+ GVD I A + +E +A R++SA+
Sbjct: 191 LLERCLAYTVNYVKYLAETGVDAISFGHAMASNTVISAQNYEEFALPYETRLVSAIHDN- 249
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPV-QGNLDPMRLV 295
K I+ G + + + S+ I D L EL+K+ G V +GN+DP L
Sbjct: 250 -GVKAITHICGDIHGIADRIARNGSDIIDFDH---LCDVTELKKQTGKVLRGNIDPSLLA 305
Query: 296 VGN--QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G +V + + G FI G +T P+N+ V+ R
Sbjct: 306 NGTAQEVYDQTAKVVQEGKKGGNFILGSGCEVTATTPPENLKAFVQAGR 354
>gi|73668587|ref|YP_304602.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|1107726|emb|CAA62995.1| methylcobalamin: Coenzyme M methyltransferase (isoenzyme I)
[Methanosarcina barkeri]
gi|72395749|gb|AAZ70022.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
gi|1587218|prf||2206339A methylcobalamin/coenzyme M methyltransferase
Length = 339
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYT-PEYTVELTLQPI 63
K ++L L+G ++ P+ + Q G ++ K +T PE +L +
Sbjct: 7 KTRLLAALEGKPVDKVPVCSVTQTG-----IVELMDKVGAAWPEAHTNPELMAKLAIANY 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLN------PNIDLF 116
+A L + V+ +A+G + N G + P T Y N P L
Sbjct: 62 ELSGLEAVRLPYCLTVLGEAMGCEI----NMGTKNRQPSVTASPYPKNLDGAVVPADLLQ 117
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSR 175
N + + ++I I+R+K+ + +IG P T+AS +IS F+K ++ + +
Sbjct: 118 RNRIPAVLEAIKIVREKVGPDVPIIGGMEGPVTLASDLISVKSFMK-------WSIKKTD 170
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
F LD ++ + Y A + AG DVI I D A
Sbjct: 171 LFEQALDISAEAAIAYANAMVEAGADVIAIADPVA 205
>gi|154280402|ref|XP_001541014.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412957|gb|EDN08344.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 109
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMID 303
FAKGA Y L + + + +GLDW A+ + + +QGN DP L G++ I
Sbjct: 4 FAKGAWYALDSLCG-SGYDVVGLDWLHDPVEAMNIARGRVTLQGNADPGCLY-GSRESIT 61
Query: 304 GV--NAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
+ N + G+ +I NLGHGITP VDP+++
Sbjct: 62 AIVENMVKGFWGAKKGWIANLGHGITPLVDPEDL 95
>gi|21226278|ref|NP_632200.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20904521|gb|AAM29872.1| Methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 339
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 5 KQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K+++L L+G ++ P+ LM Q G PE PE
Sbjct: 7 KERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHS-------------EPELM 53
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD----PITTQEIYLLN 110
+L + +A + + V+A+A+G V +N P + P + + +
Sbjct: 54 AKLAIANYEVSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPE 113
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVF 169
ID + + SI I+R+K+ + +IG P T+AS + S F+K +
Sbjct: 114 NLIDK--GRIQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKTFMK-------W 164
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
+ + F +LDF ++ + Y + AG DV+ I D A
Sbjct: 165 SLKKPDLFEQVLDFATEATIAYANSMALAGADVVAIADPVA 205
>gi|111074969|gb|ABH04830.1| MtaA/CmuA family methyltransferase [Heliobacillus mobilis]
Length = 331
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 11/178 (6%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q+ L +K P++ + G T AS + F+K+ +++ A++ ++D
Sbjct: 119 VVQAAYRLARKHPDYPIIGNLTGPISTAASIVDPMSFLKELRKDKENAHR-------VID 171
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNA 240
++S+V Y + AGV VI I D A LG FE YA + ++I + +A
Sbjct: 172 YVSNVLIAYAQLMVDAGVKVISIGDPTATGEILGPKMFEEYAVPYLNKVIDGIHEL--DA 229
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I G +++ L +AI D V L E + GNL L GN
Sbjct: 230 AVIVHICGKMQSVRHMIPLIKGDAISTDAMVNLKRLKEDYPQLTTMGNLSTYLLEGGN 287
>gi|317483746|ref|ZP_07942689.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316925008|gb|EFV46151.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 448
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--------ITTQEIYL 108
E ++ +Y+ D D+ V A+ LG ++ + +N P + I T+ I
Sbjct: 49 ECCIEAESQYSPDGMTPMFDLQVEAEILGCDLAWYDNTPPTVCSHPLEGELVIPTRRIQK 108
Query: 109 LNPNIDLFLNYLLPIFQSISILR--KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
+ I L L+ ++R K I + G P+T+AS++ D
Sbjct: 109 TDGRIPLILD----------VMRRFKAAKPDIAMYGLVCGPFTLASHLRGTNIFMDM--- 155
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSV 226
Y + L+ + +V E I AG D+I D + FE + +
Sbjct: 156 ----YDDEDGVKALVAYCEEVVREVADYYIEAGCDIIAAVDPLVSQISPDMFETFLSEPY 211
Query: 227 GRIISAVRRK-YPNAKFISFAKGAGYMLKNYR--RLTDSNAIGLDWSVPLSFALELQKEG 283
+ +++R K P++ F+ G KN LT + I +D +V + A +L
Sbjct: 212 TKFFASMREKGMPSSFFV-----CGDATKNIEPMCLTRPDCIAIDENVDIVEAKKLTDAH 266
Query: 284 --PVQGNLD-PMRLVVGNQVMIDGVNA---ILDVLGSGPFIFNLGHGI 325
+ GNL + +++G Q D A ++D +G+ FI G +
Sbjct: 267 GITISGNLQLTITMLLGTQQ--DNQKAAIELMDKMGTHRFILAPGCDV 312
>gi|298674283|ref|YP_003726033.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287271|gb|ADI73237.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 340
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 129/353 (36%), Gaps = 33/353 (9%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K++ + L+G ++ P Q G Q+ + D Y + L
Sbjct: 8 KERFAKALKGESVDRMPAICATQTGTV----EQMEASGAYWPDAHYDADKMTTLAEAAHT 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP- 122
F+ + DI A+ G ++ EG + P + +I Y L
Sbjct: 64 AVGFEMVRVPFDITAEAEFFGCELK----EGTQKQQPSVVGHVVKTEDDIKSLEGYDLSQ 119
Query: 123 -----IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
I +SI L K + + + G P+++A ++ + + N F +
Sbjct: 120 KRIGTICESIKQLADKYGDELPIFGSMIGPFSLAQHLNGDDWFTNVMINEEFGKK----- 174
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
LLDF ++ Y Q+ G D + I D A LG F + +++ A +
Sbjct: 175 --LLDFTTEFCVAYAKKQVENGADTVVIIDPTASYELLGPDFFRKFVLPYHKQVVDACK- 231
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDS--NAIGLDWSVPLSFALELQKEGPVQGNLDPMR 293
+ + G K + +S +AI +D V ++ A E + + GNLDP+
Sbjct: 232 ---DMGVGTIVHICGDTTKGLPIMDESGTDAISVDQKVDVATAKENVQNAKIVGNLDPVE 288
Query: 294 -LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L GN +I + L G G GI +N+ +V+ +S K
Sbjct: 289 TLWNGNPDVIK--EKSQESLDKGVDFLAPGCGIVSATSNENLQTMVECAKSWK 339
>gi|21227172|ref|NP_633094.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20905508|gb|AAM30766.1| Methylcobalamin: Coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 342
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K ++L L+G ++ P+ + Q G + E + + + PE +L L
Sbjct: 10 KTRLLAALKGEPVDKVPVCSVTQTG--IVELMDVVGA--PWPEAHTNPELMAKLALANHE 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRF-VENEGPRMDPIT-TQEIYLLNPNIDLFLNYLLP 122
+A L + V+ +A+G + +N P + +++ DL +P
Sbjct: 66 LSGLEAVRLPYCLTVLVEAMGCEINMGTKNRQPSVTGHPYPKDLEGAAVPADLLQRGRIP 125
Query: 123 I-FQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I I+R+K+ + ++G P TVAS ++S F+K ++ + +
Sbjct: 126 VVLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSFMK-------WSIKKTDLLEQA 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
LD ++ S Y A + AG DVI I D A
Sbjct: 179 LDIATEASIIYANAMVEAGADVIAIADPVA 208
>gi|45358393|ref|NP_987950.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis S2]
gi|44921151|emb|CAF30386.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 363
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN- 110
PE + ++ RR+ D A +F+D+ ++++A+G VR E+ ++ ++ +
Sbjct: 50 PEALADAIIKTYRRFGADGARIFTDLFLVSEAMGAKVRKPEDNTADLEEPAINDMSEFDK 109
Query: 111 -PNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMI 155
ID + +P+ ++I I+R ++ + + + P+T A ++I
Sbjct: 110 LKVIDPYTQGRIPVHLRAIEIVRDEIASEVGVTASVVGPFTNAFFLI 156
>gi|317484933|ref|ZP_07943820.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316923809|gb|EFV45008.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 330
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPI-TTQEIYLLNPN 112
VE L+ + Y D IL D+ + A+ LG +++ +N P R P+ +T EI P+
Sbjct: 67 VESLLEVEKMYAPDGLILLFDLQLEAEILGCTIKWEKNGPPSVRSHPLESTFEI----PD 122
Query: 113 IDLFLNY-LLPIFQSIS-ILRKKLPNHITLIG-FCGAPWTVASYMISGGFIKDHGQNRVF 169
I + + +P+ ++ ++K + + L G FCG P+T+AS++ F +D
Sbjct: 123 IKITRDSGRIPLVLDVTRRIKKAVGDRTALYGLFCG-PYTLASHLRGTNFFRD------- 174
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
A Q+ L+ + +++ + + GVDVI D + F+N+ +I
Sbjct: 175 ARQHPEYVKELMAYTTELGLQMADFYLEEGVDVIVPVDPVVSQISPTHFKNFVFEPYAKI 234
Query: 230 ISAVRRKYPNAKFI------------------SFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+R K + F S A + +LTDS + + ++
Sbjct: 235 FRHIRNKGAFSSFFVCGNATHILELMCQTKPDSLAVDENVNIVAAHKLTDSYDVAIGGNI 294
Query: 272 PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
PL+ AL L + LD M++ + +ID +N
Sbjct: 295 PLTTALLLGTQ------LDNMKVGID---LIDSLNT 321
>gi|164691173|dbj|BAF98769.1| unnamed protein product [Homo sapiens]
Length = 116
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
++L+ + ALG V V +GP +P+ ++ + ++ + L +FQ+I+
Sbjct: 8 TSLLYPRCFLPLQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAIT 67
Query: 129 ILRKKLPNHITLIGFCGAP 147
+ R++L + LIGF GAP
Sbjct: 68 LTRQRLAGRVPLIGFAGAP 86
>gi|237733454|ref|ZP_04563935.1| methylcobamide:CoM methyltransferase mtbA [Mollicutes bacterium D7]
gi|229383489|gb|EEO33580.1| methylcobamide:CoM methyltransferase mtbA [Coprobacillus sp. D7]
Length = 337
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 105/233 (45%), Gaps = 20/233 (8%)
Query: 71 AIL-FSDILVIADALGRNVRFVENEGPRM------DPITTQEIYLLNPNIDLFLNYLLPI 123
AIL F D+ V A+ G ++ +NE P + D Q + + P + + L
Sbjct: 60 AILGFMDLSVEAECFGAEIKVTDNEVPTVVGQLIEDEDDAQALKV--PAVGSGRSQLY-- 115
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + ++ + I ++G C P+++A G + D + + Y+ + +L+
Sbjct: 116 IDAIKKTKAEIKD-IPILGGCIGPFSLA------GRLMDVSEAMINCYEEPEMVHIVLEK 168
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ +Y+ A AG D I + + AG L +++ V +I++AV+ + +
Sbjct: 169 ATKFLIDYISAYKEAGADGILMAEPLAGVLSPVLATEFSSTYVKKIVTAVQDENFMVVYH 228
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLV 295
+ M+ +++ + + A ++ + LEL K+ V GN+DP+ ++
Sbjct: 229 NCGNNTLKMIDDFKEIK-ARAYHFGNAINIKKMLELMPKDCLVMGNIDPVEII 280
>gi|116621786|ref|YP_823942.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224948|gb|ABJ83657.1| Uroporphyrinogen decarboxylase (URO-D) [Candidatus Solibacter
usitatus Ellin6076]
Length = 357
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 146/363 (40%), Gaps = 56/363 (15%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R++K+ + +++ P ++P Y I+ +D PE E L+ +
Sbjct: 14 RREKMDRIPMALIVDSP----------WIPGYLGIKH-----MDYYLDPELWFESNLKIM 58
Query: 64 RRYNFDAAILFSDILVIAD------------ALGRNVRFVENEGPRMDPITTQEIYLLNP 111
R F DI+ I LG ++F ++ P +Y L
Sbjct: 59 RE--------FPDIIFIPSWWMEYGMAAEPSILGAKIKFWQDNTPS----EYHTLYRLE- 105
Query: 112 NIDLFLNYLLPI--FQSISILR-KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
+ID F Y + F ++++ R K + I +G+ T + + GF++ +
Sbjct: 106 DIDNFPEYEVDADAFAALTLHRIKMIKPRIEDLGYILPMVTARGPLCTAGFVRGTTHFMI 165
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQ---IHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
++ + + L+D + V ++L AQ + V+ I I D G + E + +A
Sbjct: 166 DIVEDPKGAHRLIDLCTRVVIDWLKAQQAVMGDKVEGIFILDDIVGFINEEHYLEFAHPY 225
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP- 284
+ RI A +P+ ++ + L D+ L+W ++ G
Sbjct: 226 LKRICDA----FPD-NWVKLYHNDAEVDACLDHLPDAGFNVLNWGKQRHITEVKRRVGDR 280
Query: 285 --VQGNLDPMRLVVGN--QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN++P+ + V + + D +L+ G I ++G G++P + +N+L +++
Sbjct: 281 MCLMGNVNPLEIAVRGTPEEVKDETLEVLEGAGGEGIILSVGGGVSPGMPRENILAMLEA 340
Query: 341 VRS 343
++
Sbjct: 341 LQE 343
>gi|20090473|ref|NP_616548.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19915492|gb|AAM05028.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 339
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 77 ILVIADALGRNVRF-VENEGPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
+ V+A+A+G V +N P + P L P+ L + + ++I I+R+K
Sbjct: 75 LTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGLKMPDNLLGTGRIPVVLEAIKIIREK 134
Query: 134 LPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ + +IG P T+AS + S F+K ++ + F +LDF ++ + Y
Sbjct: 135 VGPDVPVIGGMEGPVTLASDLSSVKSFMK-------WSIKKPDLFERILDFAAEGTVVYA 187
Query: 193 IAQIHAGVDVIQIFDTHA 210
A + AG D+I + D A
Sbjct: 188 NAMVEAGADIISVADPVA 205
>gi|297616508|ref|YP_003701667.1| uroporphyrinogen decarboxylase (URO-D) [Syntrophothermus
lipocalidus DSM 12680]
gi|297144345|gb|ADI01102.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophothermus
lipocalidus DSM 12680]
Length = 362
Score = 39.7 bits (91), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---I 106
++P E ++ + +D+ + D L +A+A+G +R+ ++ P+M ++ +
Sbjct: 52 HSPGLMAEAQVRAFEVFGYDSVGVGPDYLGMAEAMGCRLRYAPDQRPQMATAVVEDERSL 111
Query: 107 YLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIKDHG 164
L P ++ + LP++ +++ ++ ++ + + + G P+T+A+ + + F+KD
Sbjct: 112 SRLKP-VEAERDGRLPMYLEALKTIKDRVGDRVKVGSGVGGPFTLAACLRGTEEFLKDLI 170
Query: 165 QNRVFAYQ 172
+ FAYQ
Sbjct: 171 RKPAFAYQ 178
>gi|167755119|ref|ZP_02427246.1| hypothetical protein CLORAM_00623 [Clostridium ramosum DSM 1402]
gi|167705169|gb|EDS19748.1| hypothetical protein CLORAM_00623 [Clostridium ramosum DSM 1402]
Length = 344
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 71 AIL-FSDILVIADALGRNVRFVENEGPRM------DPITTQEIYLLNPNIDLFLNYLLPI 123
AIL F D+ V A+ G ++ +NE P + D Q + + P + + L
Sbjct: 67 AILGFMDLSVEAECFGAEIKVTDNEVPTVVGQLIEDEDDAQALKV--PAVGSGRSQLY-- 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + ++ + I ++G C P+++A G + D + + Y+ + +L
Sbjct: 123 IDAIKKTKAEIKD-IPILGGCIGPFSLA------GRLMDVSEAMINCYEEPEMVHIVLKK 175
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ +Y+ A AG D I + + AG L +++ V +I++AV+ + +
Sbjct: 176 ATKFLIDYISAYKEAGADGILMAEPLAGVLSPVLATEFSSTYVKKIVTAVQDENFMVVYH 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLV 295
+ M+ +++ + + A ++ + LEL K+ V GN+DP+ ++
Sbjct: 236 NCGNNTLKMIDDFKEIK-ARAYHFGNAINIKKMLELMPKDCLVMGNIDPVEII 287
>gi|83591166|ref|YP_431175.1| methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
gi|83574080|gb|ABC20632.1| Methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
Length = 349
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 101/266 (37%), Gaps = 39/266 (14%)
Query: 5 KQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K++ L L G ++ P+ LM + G Y P+ +K Y E
Sbjct: 11 KRRFLSALFGGRVDRTPVANPTSLVTVELMERTGAYFPDAHLDAEKMARLAATSY--EVL 68
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNI 113
T+ P+ + ++A L V D + V P DP I + +L P++
Sbjct: 69 GFDTIMPVFSAHTESAALG----VPVDWGDKMSWPVNTSHPITDPEQIVIPDSFLEEPSM 124
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
L+ +I ILR + + + +IG PW++A +++ ++ +
Sbjct: 125 RTVLD-------AIKILRSQYGDRVAIIGKTYGPWSLAYHLVG---TENFLMETILNPDK 174
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF--------ENYAARS 225
+R + L+ L + S AQI AG D I D G L E+ Y R
Sbjct: 175 ARRY---LEVLLEASLLSAKAQIKAGADAILWGDHATGDLVSAEYYRDFLMKVHQYVTRE 231
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGY 251
VG I + KFI + AG+
Sbjct: 232 VGAPI-ILHICGNTTKFIPYIVEAGF 256
>gi|84489565|ref|YP_447797.1| MtaA1 [Methanosphaera stadtmanae DSM 3091]
gi|84372884|gb|ABC57154.1| MtaA1 [Methanosphaera stadtmanae DSM 3091]
Length = 339
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 126/306 (41%), Gaps = 37/306 (12%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM---DPITTQEI 106
Y P+ +L L ++ + A + D+ A+A G + + P + PI E
Sbjct: 45 YDPKQMTKLGLSLYKQAKLENARIPFDMTSEAEAFGCKISSNSHSPPSIIEKAPIEYPE- 103
Query: 107 YLLNPNIDLFLNY-----LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
N+D+ +Y L I +SI +++ + P ++G G P+T+A ++I
Sbjct: 104 -----NLDIPSDYTNKKRLAVISESIELIKNEYPEVPVIVGLVG-PFTLAGHII------ 151
Query: 162 DHGQNRVFAYQNSRAFN--WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHE 217
G ++ N+ +F +LD + D E +AG DVI I D A +
Sbjct: 152 --GIEKLVKMLNTESFTVETILDVVLDAQIELAKTYTNAGADVICIPDGSASPDLIQPEY 209
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL 277
F Y ++ + ++ + I + +L++ + + N + ++ S+ A
Sbjct: 210 FREYEKEALNELAKNIKCQ----SIIHMCGQSRPILEDLLEI-NFNGLSIEESINTGEAR 264
Query: 278 ----ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+L + + GN+ + ++ N+ + + ++L G I GI P+ +N
Sbjct: 265 MVKEDLSSDTVIIGNISSTQTLL-NKTTNEVKEEVKEILKHGTDILAPSCGIAPKTPLEN 323
Query: 334 VLDLVK 339
+ V+
Sbjct: 324 IKAFVE 329
>gi|218192798|gb|EEC75225.1| hypothetical protein OsI_11494 [Oryza sativa Indica Group]
Length = 257
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
L +AGR Y+ + ++ +F + + VE++LQP + + D AILFSDIL
Sbjct: 67 LAYEAGRE--SYQLLCERHPSFCERSELVDLVVEISLQPWKVFTADGAILFSDILTPLPR 124
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQSISILRKKLPNHI 138
+ V+ +G + DP+ T +N + +P + Q+++ILR+++ + +
Sbjct: 125 MNIPFDIVKGKGSVIFDPLRTA--AAVNEVREFVPEEWVPYVGQALNILREEIVDSV 179
>gi|153855881|ref|ZP_01996856.1| hypothetical protein DORLON_02881 [Dorea longicatena DSM 13814]
gi|149751849|gb|EDM61780.1| hypothetical protein DORLON_02881 [Dorea longicatena DSM 13814]
Length = 343
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 17/191 (8%)
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDHGQNRVFAY 171
+D+ + + +I IL+ + + + +IG P + AS ++ F K+ + + A+
Sbjct: 114 MDMNYGRVKVVLDAIRILKSRNLD-VPIIGNITGPVSTASSVMEPVIFYKELRKKKEDAH 172
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRI 229
+ ++ ++D + AQI AG D+I I D LG FE YA + RI
Sbjct: 173 K-------YMELVADEIIRFARAQIDAGADIIAISDPSGTGEILGPKLFEEYAVHYINRI 225
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRR--LTDSNAIGLDWSVPLSFALELQKEGPVQG 287
I ++ + K G M Y + + S+ + D V +S A + K+ + G
Sbjct: 226 IDHLQAE----KMGVIVHICGQMRNVYAQVEMIHSDVLSFDSCVAMSDAKKHLKKHVLMG 281
Query: 288 NLDPMRLVVGN 298
N+ L GN
Sbjct: 282 NVSTWTLEFGN 292
>gi|222624899|gb|EEE59031.1| hypothetical protein OsJ_10780 [Oryza sativa Japonica Group]
Length = 257
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
L +AGR Y+ + ++ +F + + VE++LQP + + D AILFSDIL
Sbjct: 67 LAYEAGRE--SYQLLCERHPSFCERSELVDLVVEISLQPWKVFTPDGAILFSDILTPLPR 124
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP-IFQSISILRKKLPNHI 138
+ V+ +G + DP+ T +N + +P + Q+++ILR+++ + +
Sbjct: 125 MNIPFDIVKGKGSVIFDPLRTA--AAVNEVREFVPEEWVPYVGQALNILREEIVDSV 179
>gi|297820056|ref|XP_002877911.1| hypothetical protein ARALYDRAFT_906718 [Arabidopsis lyrata subsp.
lyrata]
gi|297323749|gb|EFH54170.1| hypothetical protein ARALYDRAFT_906718 [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 19/97 (19%)
Query: 134 LPNHITLIGFCGAPWTVASYMISGG---------FIKDH----GQNRVFAYQNSRAFNWL 180
LP + L G G WTV+ ISG F KDH G+ F Y R F
Sbjct: 38 LPKTVKLQGIGGKIWTVSLEKISGAVYFATGWSKFAKDHELKNGEFMTFVYDGHRTFE-- 95
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE 217
V + + A + IQ+ D+H+ + E E
Sbjct: 96 ----VSVFERFGFKETRAEIQAIQLSDSHSDSVVEEE 128
>gi|82621728|gb|ABB86544.1| sterol desaturase [uncultured Bacteroidetes bacterium 'SBI2-18
P41A3']
Length = 274
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 22 IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIA 81
++L+ G YLP Y Q + KF + + + ++ V+ T R + F++ + F L+
Sbjct: 98 VFLLDLIGAYLPHYIQHKVKFLWKIHLVHHSDHNVDTTTGN-RHHPFESVVRFVFTLIGV 156
Query: 82 DALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLL 121
LG N+ V + I+TQ + +NP ID FL+Y++
Sbjct: 157 AILGVNMWLVF-LYQSLSVISTQFTHANININPKIDKFLSYII 198
>gi|159906203|ref|YP_001549865.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C6]
gi|159887696|gb|ABX02633.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C6]
Length = 287
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 18/171 (10%)
Query: 77 ILVIADALGRNVRF-VENEGPRMDPI---TTQEIYLLNPNIDLFLNYLLPIFQSISILRK 132
+ V A++LG + E GPR T E+ ++ P IDL + + +I L++
Sbjct: 59 MTVEAESLGAKINMGDEKYGPRAKEYAFKTLDELEIIKP-IDLTNGRIKIVLDAIHELKE 117
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
I ++ G ++S M S F K+ +N N L+FL D +Y+
Sbjct: 118 --SGEIPILAVEGPITIISSLMESRIFYKE-------LKKNPERMNTFLNFLEDEIVKYI 168
Query: 193 IAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNA 240
++ I G +I F AG + G F Y+ + II V+ + N
Sbjct: 169 LSGIENGAKIIS-FGDPAGSIDIVGPKVFREYSGKIAKNIIEKVKSQEKNC 218
>gi|297620100|ref|YP_003708205.1| methyltransferase MtaA/CmuA family [Methanococcus voltae A3]
gi|297379077|gb|ADI37232.1| methyltransferase MtaA/CmuA family [Methanococcus voltae A3]
Length = 356
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 124/311 (39%), Gaps = 34/311 (10%)
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD--PITT----- 103
P+ +LT + F+ + + V A+A+G V+ E PR+ PI +
Sbjct: 53 PQKMADLTYAIYKNGGFENVGVPFCMTVEAEAMGAKVKMGTEITEPRVTEYPINSVVEYT 112
Query: 104 --QEIYLLNPNIDLFLNYLLP---IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
EI N D + NY+ I SI IL+ K + ++ P +VAS ++
Sbjct: 113 NLNEILSKNGKNDEY-NYVSREDVILDSIKILKNK-DKDVPVVANLTGPVSVASSLME-- 168
Query: 159 FIKDHGQNRVFAYQNSRA----FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--C 212
+ Y+ R+ + +DF++D ++ AQ+ AG DV+ I D
Sbjct: 169 --------PITYYKELRSKPEKVHEYMDFITDNLIKFGKAQLKAGADVLAISDPSGTGEI 220
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
LG F+ YA + R+I + I + + L +S+AI D
Sbjct: 221 LGPRMFKQYATPYLNRLIDETQDYAETGTIIHICGRLKSIYGEIKTL-NSDAISFDSITD 279
Query: 273 LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+ +E + GN+ L G I+ +++ + G I + GI + +
Sbjct: 280 VKQVVENVPGKAIMGNVSTFTLENGTPQSIERMSSA--CIKFGVDILSPACGIGVRTKLE 337
Query: 333 NVLDLVKTVRS 343
N+ +V T ++
Sbjct: 338 NIQAMVNTAKN 348
>gi|300855284|ref|YP_003780268.1| putative methyltransferase MtaA/CmuA family [Clostridium
ljungdahlii DSM 13528]
gi|300435399|gb|ADK15166.1| predicted methyltransferase MtaA/CmuA family [Clostridium
ljungdahlii DSM 13528]
Length = 341
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKY 237
++DF++D + AQ++AG D+I I D LG F Y + +II + KY
Sbjct: 175 MMDFVTDNLINFGRAQLNAGADLITISDPSGTGEILGPSTFRKYGLFYINKIIDGL-NKY 233
Query: 238 PNAKFISFAKGAGYMLKNYRRLTD--SNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
+K+ G + Y+ L + S+AI D + E + GN+ L
Sbjct: 234 --SKYGIIVHICGRLKSIYKELNELHSDAISFDAVTSIKQMCENVTNKAIMGNVSTFSL- 290
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
N + + + + L SG I + G+ KN+ +V+ + K
Sbjct: 291 -QNSSLEEVTSLSKNCLKSGVHILSPACGLGTTTPLKNIQAMVQAANNFK 339
>gi|45358394|ref|NP_987951.1| methylcobalamin:coenzyme M methyltransferase [Methanococcus
maripaludis S2]
gi|44921152|emb|CAF30387.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 342
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 19/276 (6%)
Query: 77 ILVIADALGRNVRF-VENEGPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
+ V A+A G V+ + PR+ PI + Y +I++ + +SI IL++K
Sbjct: 76 MTVEAEAFGAGVKMGTDITEPRVTNYPIDSVTEYEKLNHINIDEGRGKTVLESIEILKEK 135
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ G T +S M + K+ + A +DF+++ E+
Sbjct: 136 NSEVPIIANLTGPVSTASSLMEPVTYYKE-------LRRKPEAAKEFMDFVTENLIEFGK 188
Query: 194 AQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
AQ+ AG DV+ I D LG F+ +A + +II I G
Sbjct: 189 AQLKAGADVLAISDPSGTGEILGPKMFKEFAVPYLNKIIEETSDLAETGTIIHI---CGR 245
Query: 252 MLKNYRRLTD--SNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
+ Y + S+AI D + +E + GN+ L G ID ++
Sbjct: 246 LKSVYAEINSLKSDAISFDSITDVGQVVENVSGKAIMGNVSTFALENGTPDSIDKMSKA- 304
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G I + GI + +N+ +V+ ++ K
Sbjct: 305 -CIKFGVDILSPACGIGVRTKLENIQAMVQACKNSK 339
>gi|404563|gb|AAB27814.1| uroporphyrinogen decarboxylase {N-terminal} {EC 4.1.1.37}
[Rhodobacter sphaeroides, Peptide Partial, 27 aa]
Length = 27
Score = 37.0 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLP 33
+L L+G + P IWLMRQAG YLP
Sbjct: 2 MLRALKGETLPTPSIWLMRQAGPYLP 27
>gi|37675826|ref|NP_936222.1| alpha-galactosidase [Vibrio vulnificus YJ016]
gi|37200365|dbj|BAC96192.1| alpha-galactosidase [Vibrio vulnificus YJ016]
Length = 706
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 158 GFIKDHGQNR-VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
G+ + G+N+ V QN AFN+L + L + Y IA I ++ + +H G H
Sbjct: 402 GYDQPTGRNQYVINLQNDDAFNFLFERLDHFLSTYNIAYIKWDMNREVVQPSHLGQAAAH 461
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
N R +++ VR K+PN + S A G G
Sbjct: 462 ---NQTQRYY-QLVDKVREKHPNVEIESCAAGGG 491
>gi|27367701|ref|NP_763228.1| alpha-galactosidase [Vibrio vulnificus CMCP6]
gi|27359273|gb|AAO08218.1|AE016812_200 Alpha-galactosidase [Vibrio vulnificus CMCP6]
Length = 706
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 158 GFIKDHGQNR-VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
G+ + G+N+ V QN AFN+L + L + Y IA I ++ + H G H
Sbjct: 402 GYDQPTGRNQYVINLQNDDAFNFLFERLDHFLSTYNIAYIKWDMNREVVQPAHLGQAAAH 461
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
N R +++ VR K+PN + S A G G
Sbjct: 462 ---NQTQRYY-QLVDKVREKHPNVEIESCAAGGG 491
>gi|320157985|ref|YP_004190363.1| alpha-galactosidase [Vibrio vulnificus MO6-24/O]
gi|319933297|gb|ADV88160.1| alpha-galactosidase [Vibrio vulnificus MO6-24/O]
Length = 706
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 158 GFIKDHGQNR-VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
G+ + G+N+ V QN AFN+L + L + Y IA I ++ + H G H
Sbjct: 402 GYDQPTGRNQYVINLQNDDAFNFLFERLDHFLSTYNIAYIKWDMNREVVQPAHLGQAAAH 461
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
N R +++ VR K+PN + S A G G
Sbjct: 462 ---NQTQRYY-QLVDKVREKHPNVEIESCAAGGG 491
>gi|91774014|ref|YP_566706.1| methylcobalamin:coenzyme M methyltransferase [Methanococcoides
burtonii DSM 6242]
gi|91713029|gb|ABE52956.1| methylamine-specific methylcobamide:CoM methyltransferase
[Methanococcoides burtonii DSM 6242]
Length = 344
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 20/230 (8%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I +SI I+ + + +IG P+++A ++ + D + +++
Sbjct: 127 ILESIKIVADEYGAELPIIGSMIGPFSLAQHLTGDSWFMDIMTKEEYGLA-------IME 179
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVR-RKYPN 239
F ++ Y AQI G D + I D A +G ++ + +++ A+ R P
Sbjct: 180 FTTEFGIAYANAQIDNGADTLSIIDPTASYSLIGGEFYKKFVVPFHAKLVEAMHARNVPV 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
+ G + + +AI +D +V + A+ ++ + GNLDP+ +
Sbjct: 240 VLHVCGDTTDGLAIMESAGV---DAISVDQNVNAATAVSKVEKALIVGNLDPVNCLWNTS 296
Query: 300 VMIDGVNA----ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V + V A +L L G + G GI Q ++ +V+ +S K
Sbjct: 297 V--ETVTAESERVLKEL-DGKGLLAPGCGIVSQTPSAHLRAMVEVAKSYK 343
>gi|325290645|ref|YP_004266826.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966046|gb|ADY56825.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 342
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 31 YLPEYRQIRKKFKNF-LDMCYT-PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNV 88
+L R+ K+ F L +T P+ + ++ + +N D + + V+ +ALG +
Sbjct: 22 FLLSTREFGMKYAGFSLSQAFTDPDSFIGAQIKVRQDFNQDGVWDINAVPVVDEALGAKL 81
Query: 89 RFVENEGPRMD--PITTQ-----EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
F E++ P +D P ++ L+NPN D + Y+L + Q L+ + L
Sbjct: 82 VFPEDDSPYVDYNPFLKSLAELDKLKLVNPNTDGRMPYMLSLVQK---LKAAAGPDVPLF 138
Query: 142 GFCGAPWTVASYMISG--GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
+ P+ A M+ G F +D ++ LL FL+D Y A I G
Sbjct: 139 AWVSQPFRSAC-MLRGEANFYRD-------LIRHPNEARELLSFLTDNLIAYGKALIDRG 190
Query: 200 VDVIQ 204
D+I
Sbjct: 191 ADIIH 195
>gi|262189742|ref|ZP_06048099.1| uroporphyrinogen III decarboxylase [Vibrio cholerae CT 5369-93]
gi|262034378|gb|EEY52761.1| uroporphyrinogen III decarboxylase [Vibrio cholerae CT 5369-93]
Length = 70
Score = 35.8 bits (81), Expect = 9.6, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
+QGN+DP L + + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 3 LQGNMDPSILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAV 61
Searching..................................................done
Results from round 2
>gi|254780812|ref|YP_003065225.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040489|gb|ACT57285.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 346
Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats.
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL
Sbjct: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL
Sbjct: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL
Sbjct: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA
Sbjct: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV
Sbjct: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI
Sbjct: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
>gi|157368536|ref|YP_001476525.1| uroporphyrinogen decarboxylase [Serratia proteamaculans 568]
gi|167012318|sp|A8G8F7|DCUP_SERP5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157320300|gb|ABV39397.1| uroporphyrinogen decarboxylase [Serratia proteamaculans 568]
Length = 354
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 188/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PIT++ P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITSRADVDKLPAFDPEVE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 -LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI P V P+N V+ V ++
Sbjct: 299 ASPERIGQEVETILAGFGHGEGHVFNLGHGIHPDVPPENAGAFVEAVHAQS 349
>gi|78484468|ref|YP_390393.1| uroporphyrinogen decarboxylase [Thiomicrospira crunogena XCL-2]
gi|123556100|sp|Q31JF4|DCUP_THICR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78362754|gb|ABB40719.1| uroporphyrinogen decarboxylase [Thiomicrospira crunogena XCL-2]
Length = 354
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR RK+ +F+D+C E E+T
Sbjct: 1 MAELQNDRFLRALLKEPVDQTPVWMMRQAGRYLPEYRATRKQAGSFMDLCRNKELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G +RF EGP D + +
Sbjct: 61 LQPLERYPLDAAILFSDILTIPDAMGLELRFQTGEGPIFDKPIKSMSDAKKLFVPDMASE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGYVMDAVSTIRKALDGRVPLIGFSGSPWTLATYMVEGGSSKTFAKIKAMMYDQPATLHH 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD L+D YL AQI AG +QIFDT G L +++ ++ + +I+ ++R+
Sbjct: 181 ILDVLADSVIAYLNAQIEAGAQAVQIFDTWGGVLTPRDYKEFSLNYMAKIVDGLKRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVILFTKGGGQWLESMAE-TGCDALGLDWTTDIDDARARVGDKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G G +FNLGHGI P++DP++ +K V
Sbjct: 300 SPDRIREEVATILEKYGQGTGHVFNLGHGIHPEIDPEHAGAFIKAVTELS 349
>gi|327479229|gb|AEA82539.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri DSM 4166]
Length = 354
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F EGPR + + + I L +
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLYFETGEGPRFKKVVSSAADIEALPIPDPEKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y+N +A + LLD
Sbjct: 125 MDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYENPQAMHALLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L++ + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 VILFTKGGGLWLESMAD-AGAEALGLDWTCDIGEARRRVGDKVALQGNMDPSVLYAKPDA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + +++V
Sbjct: 304 IRAEVARILASFGHGNGHVFNLGHGITPEVDPAHAGAFIESVHELS 349
>gi|146280958|ref|YP_001171111.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri A1501]
gi|145569163|gb|ABP78269.1| uroporphyrinogen decarboxylase [Pseudomonas stutzeri A1501]
Length = 367
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 18 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPELACEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F EGPR + + + I L +
Sbjct: 78 DRYPLDAAILFSDILTVPDAMGLGLYFETGEGPRFKKVVSSAADIEALPIPDPEKDLGYV 137
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y+N +A + LLD
Sbjct: 138 MDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYENPQAMHALLDK 197
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 198 LAQSVTSYLNGQILAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRVP 257
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L++ + A+GLDW+ + A + + +QGN+DP L
Sbjct: 258 VILFTKGGGLWLESMAD-AGAEALGLDWTCDIGEARRRVGDKVALQGNMDPSVLYAKPDA 316
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + +++V
Sbjct: 317 IRAEVARILASFGHGNGHVFNLGHGITPEVDPAHAGAFIESVHELS 362
>gi|77361801|ref|YP_341376.1| uroporphyrinogen decarboxylase [Pseudoalteromonas haloplanktis
TAC125]
gi|123589060|sp|Q3IJU2|DCUP_PSEHT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|76876712|emb|CAI87934.1| uroporphyrinogen decarboxylase [Pseudoalteromonas haloplanktis
TAC125]
Length = 354
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 197/351 (56%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ P +D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLSDVKKIPKLDPN-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+ + +
Sbjct: 120 DLGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL AQI AG + +FD+ G L ++ ++ + + +I+ + R+Y
Sbjct: 180 LLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLIREYD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G ++ T +AIGLDW++ +S A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGQWIEAIAA-TGCDAIGLDWTINISDAKRRVGDKVALQGNMDPSMLH 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G+G +FNLGHGITP VDP+N + V
Sbjct: 299 GTPERIRQEVATILEDFGTGNGHVFNLGHGITPDVDPENAGVFINAVHEFS 349
>gi|308048100|ref|YP_003911666.1| uroporphyrinogen decarboxylase [Ferrimonas balearica DSM 9799]
gi|307630290|gb|ADN74592.1| uroporphyrinogen decarboxylase [Ferrimonas balearica DSM 9799]
Length = 354
Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRAEAGDFMSLCKNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + + + N I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQTLADNKATIENLPIPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + A+ +
Sbjct: 121 LGYVMDAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKDFAKIKKMAFAEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG +QIFDT G L + ++ R + +I+ + R Y
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVQIFDTWGGALSGPAYREFSLRYMHKIVDGLIRDYDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
+ F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 HKVPVVLFTKGGGQWLEDIAA-TGCDAVGLDWTVDVKAARARVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI DP++ + V
Sbjct: 300 PVPRIEEEVERILGEFGHGDGHVFNLGHGIHQHADPEHAGAFINAVHELS 349
>gi|109896576|ref|YP_659831.1| uroporphyrinogen decarboxylase [Pseudoalteromonas atlantica T6c]
gi|123361396|sp|Q15ZB1|DCUP_PSEA6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109698857|gb|ABG38777.1| uroporphyrinogen decarboxylase [Pseudoalteromonas atlantica T6c]
Length = 355
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 190/351 (54%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNSLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR++ DAAILFSDIL I DA+G + F + EGP+ PIT+ P D
Sbjct: 61 LQPLRRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFSKPITSMADIQNLPAPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YMI GG K + + A+ + +A +
Sbjct: 120 ELQYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++++++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIDAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K AG L++ T + +GLDW++ + A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKNAGMWLESIAA-TGCDGVGLDWTIDIDNAKARVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G GP +FNLGHGI V P+N V V
Sbjct: 299 AAPERIEQEVQKILAGFGEGPGHVFNLGHGIHLDVPPENAKVFVDAVHKYS 349
>gi|332534520|ref|ZP_08410356.1| uroporphyrinogen III decarboxylase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036010|gb|EGI72488.1| uroporphyrinogen III decarboxylase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 354
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 197/351 (56%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ P +D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPT-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+ + +
Sbjct: 120 ELGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL AQI AG + +FD+ G L ++ ++ + + +I+ + R+Y
Sbjct: 180 LLLDKLADSVIDYLNAQIKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLIREYD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G ++ T +AIGLDW++ +S A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKNGGQWIEAIAA-TGCDAIGLDWTINISDAKRRVGDKVALQGNMDPSMLH 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G+G +FNLGHGITP VDP+N + V
Sbjct: 299 GTPERIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENAGVFINAVHELS 349
>gi|114778763|ref|ZP_01453573.1| uroporphyrinogen decarboxylase [Mariprofundus ferrooxydans PV-1]
gi|114551014|gb|EAU53577.1| uroporphyrinogen decarboxylase [Mariprofundus ferrooxydans PV-1]
Length = 355
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 186/352 (52%), Gaps = 7/352 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + L + P+W+MRQAGRYL EYR R + FL++C +PE E+T
Sbjct: 1 MTELKNDLFLRACLREDVERTPVWMMRQAGRYLAEYRATRARAGGFLNLCRSPELCSEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQPI DAAILFSDILV+ +A+G + F EGP+ DPIT + P +D
Sbjct: 61 LQPIDILGADAAILFSDILVVPEAMGMELTFGVGEGPKFPDPITCRADVEKLPVLDDPSK 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R+ L + LIGF G+PWT+A+YM+ GG K+ + + + +
Sbjct: 121 ELGYVMDAVSTIRRDLNGRVPLIGFAGSPWTLATYMVEGGGSKNFSKVKAMMFNEPETMH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+D A YL QI G +QIFDT G L ++ ++ + RI+ + R+
Sbjct: 181 LLLEKLADSVAAYLNGQIANGAQAVQIFDTWGGILNTSNYKEFSLAYMQRIVQQLTREND 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
I ++KG L+ T + +GLDWS+ + A + +QGN+DP L
Sbjct: 241 GRRVPVILYSKGGMGWLEAMAD-TGCDVLGLDWSIDIDVAKARVGDRVALQGNMDPTMLY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V IL G G +FNLGHGITP V P++ ++ K VR E +
Sbjct: 300 AKPERIRAEVKDILARFGHGNGHVFNLGHGITPDVPPEHAIEFFKAVREESV 351
>gi|90022326|ref|YP_528153.1| uroporphyrinogen decarboxylase [Saccharophagus degradans 2-40]
gi|123090271|sp|Q21H88|DCUP_SACD2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89951926|gb|ABD81941.1| uroporphyrinogen decarboxylase [Saccharophagus degradans 2-40]
Length = 354
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 122/342 (35%), Positives = 186/342 (54%), Gaps = 5/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALMRQPVDQTPVWMMRQAGRYLPEYRATRAQAGDFMGLCTNPERACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ + + + L L +
Sbjct: 65 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFKKTISTAADIEKLEVIKPLQDLPYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y + A L+D
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFQKTKALIYNHPEAAAQLMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D YL AQI AG +QIFD+ G L ++ ++ + +I+ ++R+
Sbjct: 185 LADSVIAYLNAQIDAGAQAVQIFDSWGGALSHDAYKTFSLAPMAKIVKGLKRENEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L+ ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 245 VILFTKGGGQWLEAMAD-AGADCLGLDWTTDIGQARARVGDKVALQGNMDPSILYASPDR 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G+G +FNLGHGITP VDP++ ++ V
Sbjct: 304 IREEVARILASYGAGTGHVFNLGHGITPGVDPEHAGAFIRAV 345
>gi|254491241|ref|ZP_05104422.1| uroporphyrinogen decarboxylase [Methylophaga thiooxidans DMS010]
gi|224463754|gb|EEF80022.1| uroporphyrinogen decarboxylase [Methylophaga thiooxydans DMS010]
Length = 354
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 131/350 (37%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR++R K +F+ +C TPE E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDKTPVWVMRQAGRYLPEYREVRAKAGDFMTLCSTPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAI+FSDIL I DA+G + FV EGP+ + N + +
Sbjct: 61 LQPLRRYDLDAAIIFSDILTIPDAMGLGLHFVTGEGPKFSKTIQTPADIKNLTVPDMEDS 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +I + R+++ + LIGF G+PWT+A YMI GG KD + + + +
Sbjct: 121 LGYVMDAIRLTRREIDGKVPLIGFSGSPWTLACYMIEGGSSKDFAKIKGMMFDAPDQMHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG I +FDT G L + ++ + +IIS ++R+
Sbjct: 181 LLDVLADSVIAYLNAQIQAGAQAIMLFDTWGGLLSPENYNAFSLAYMKKIISGLQREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
F KG G L+ T N++GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 REVPVTLFTKGGGQWLEAMAE-TGVNSLGLDWTTDITQARQRVGNKVTLQGNMDPCVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI P VDP+N+ LV V +
Sbjct: 300 SGDTVEREVMKILAGFGKGTGHVFNLGHGIHPAVDPENMARLVDAVHTHS 349
>gi|315128052|ref|YP_004070055.1| uroporphyrinogen decarboxylase [Pseudoalteromonas sp. SM9913]
gi|315016566|gb|ADT69904.1| uroporphyrinogen decarboxylase [Pseudoalteromonas sp. SM9913]
Length = 354
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 195/351 (55%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ P +D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPT-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+ + +
Sbjct: 120 ELGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL AQ+ AG + +FD+ G L ++ ++ + + +I+ + R+Y
Sbjct: 180 LLLDKLADSVIDYLNAQVKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLIREYD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G ++ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKNGGQWIEAIAA-TGCDAVGLDWTINIGDAKRRVGDKVALQGNMDPSMLH 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL+ G+G +FNLGHGITP VDP+N + V
Sbjct: 299 GTPDRIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENAGVFINAVHELS 349
>gi|332304543|ref|YP_004432394.1| uroporphyrinogen decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171872|gb|AEE21126.1| uroporphyrinogen decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 355
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 187/349 (53%), Gaps = 7/349 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+TLQ
Sbjct: 3 SLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAILFSDIL I DA+G + F + EGP+ P+T P D L
Sbjct: 63 PLRRFDLDAAILFSDILTIPDAMGLGLYFEQGEGPKFARPLTCMADIQNLPAPDPE-QEL 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +RK L + LIGF G+PWT+A+YMI GG K + + A+ + +A + L
Sbjct: 122 QYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFSDPKALHLL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
LD L+D YL AQI AG + +FDT G L ++++++ + + +I+ + R+
Sbjct: 182 LDKLADSVILYLNAQIAAGAQSVMVFDTWGGVLSPRDYQDFSLQYMHKIVDGLTRENDGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
F K AG L++ T + +GLDW++ + A + + +QGN+DP L
Sbjct: 242 KVPVTLFTKNAGMWLESIAA-TGCDGVGLDWTIDIDNAKARIGDKVALQGNMDPSMLYAS 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P+N V V
Sbjct: 301 PERIEQEVQTILAGFGEGSGHVFNLGHGIHLDVPPENAKVFVDAVHKYS 349
>gi|119471338|ref|ZP_01613810.1| uroporphyrinogen decarboxylase [Alteromonadales bacterium TW-7]
gi|119445614|gb|EAW26898.1| uroporphyrinogen decarboxylase [Alteromonadales bacterium TW-7]
Length = 354
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 195/351 (55%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + PI++ P +D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISSLADVKKIPKLDPT-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+ + +
Sbjct: 120 ELGYVMNAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKVFGKIKKMAFAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL AQ+ AG + +FD+ G L ++ ++ + + +I+ + R+Y
Sbjct: 180 LLLDKLADSVIDYLNAQVKAGAQSLMVFDSWGGVLSPRDYNEFSLQYMHKIVDGLIREYD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G ++ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKNGGQWIEAIAA-TGCDAVGLDWTINIGDAKRRVGDKVALQGNMDPSMLH 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL+ G+G +FNLGHGITP VDP+N + V
Sbjct: 299 GTPDRIRQEVGTILEDFGTGNGHVFNLGHGITPDVDPENAGIFINAVHELS 349
>gi|94500403|ref|ZP_01306935.1| uroporphyrinogen decarboxylase [Oceanobacter sp. RED65]
gi|94427438|gb|EAT12416.1| uroporphyrinogen decarboxylase [Oceanobacter sp. RED65]
Length = 354
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 127/346 (36%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ PIW+MRQAGRYLPEYR R +FLD+C + E+T
Sbjct: 1 MTELKNDRFLRALLRQPVDRTPIWMMRQAGRYLPEYRASRADAGSFLDLCKNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+ + F EGP+ + E + I +
Sbjct: 61 LQPLERYPLDAAILFSDILTIPDAMNLGLYFETGEGPKFKKVVRTEQDVAELPIVDTASD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LSYVTNAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHVKAMMYNQPETMHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ L+ +YL AQI AG +QIFDT G L + ++ ++ R + +I+ + R++
Sbjct: 181 MLNKLALSVTDYLNAQIKAGAQAVQIFDTWGGVLSHNAYQEFSLRYMKQIVEGLMREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVV 296
I F KGAG L+ T +A+GLDW+ + A + +QGN+DP L
Sbjct: 241 RKVPVILFTKGAGQWLELMAD-TGCDALGLDWTTDIGNARRRVGDMVSLQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V ILD GSG +FNLGHGI VDP + ++ V
Sbjct: 300 KPERIREEVKTILDSYGSGTGHVFNLGHGIHQFVDPDHAKAFIEAV 345
>gi|322834811|ref|YP_004214838.1| uroporphyrinogen decarboxylase [Rahnella sp. Y9602]
gi|321170012|gb|ADW75711.1| uroporphyrinogen decarboxylase [Rahnella sp. Y9602]
Length = 354
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFSSPLTNRADVEKLPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 -LGYVMNAVRTIRKNLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPATMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKVADSVILYLNAQIKAGAQSVMIFDTWGGVLTPRDYREFSLNYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVAIQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI V P+N V+ V S
Sbjct: 299 ASPVRIEQEVETILAGFGKGNGHVFNLGHGIHQDVPPENAGAFVEAVHSLS 349
>gi|330957031|gb|EGH57291.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 354
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSSLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 300 RPEAIRKEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAVHELS 349
>gi|237798109|ref|ZP_04586570.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331020961|gb|EGI01018.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 354
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + +
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPVPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTSYLNGQIMAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGNKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 300 RPEAIRKEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAVHELS 349
>gi|120553768|ref|YP_958119.1| uroporphyrinogen decarboxylase [Marinobacter aquaeolei VT8]
gi|166234254|sp|A1TYW3|DCUP_MARAV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120323617|gb|ABM17932.1| uroporphyrinogen decarboxylase [Marinobacter aquaeolei VT8]
Length = 354
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 128/346 (36%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+T
Sbjct: 1 MTELKNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DALG + F EGP+ + E + +
Sbjct: 61 LQPLERYPLDAAILFSDILTIPDALGLGLYFETGEGPKFRKVIRSEADVDALPRMNAESD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YMI GG K + + Y +
Sbjct: 121 LDYVMNAVSTIRRELNGRVPLIGFSGSPWTLATYMIEGGSSKTFSEAKKLMYGQPEVMHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL QI AG +QIFDT G L +E ++ R + +I+ + R+
Sbjct: 181 LLDHLADSVIDYLNGQIKAGAQAVQIFDTWGGVLSSWAYEEFSLRYMTKIVDGLIRESEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 241 RRVPVIVFTKNGGQWLESIAD-CGADAVGLDWTTDIGNARARVGDKVALQGNMDPAMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL GSG +FNLGHGITP VDP++ ++ V
Sbjct: 300 PKARIRQEVADILKRYGSGSGHVFNLGHGITPDVDPEHAGAFIEAV 345
>gi|330877997|gb|EGH12146.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 354
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N ++ V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFIEAVHELS 349
>gi|311693375|gb|ADP96248.1| uroporphyrinogen decarboxylase [marine bacterium HP15]
Length = 354
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 187/347 (53%), Gaps = 8/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+T
Sbjct: 1 MTELKNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL I DALG + F EGP+ + I ++ P I+ ++
Sbjct: 61 LQPLERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFRNTIRSEADVAALPKINAEVD 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R L + LIGF G+PWT+A+YMI GG KD + + Y
Sbjct: 121 -LDYVMNAVSTIRGALNGSVPLIGFSGSPWTLATYMIEGGSSKDFREAKKLMYGQPEVMR 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ +YL QI AG +QIFDT G L +E ++ R + +I+ + R+
Sbjct: 180 RLLDHLAGAVIDYLNGQIKAGAQAVQIFDTWGGVLSSWAYEEFSLRYMKKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F K G L++ + ++A+GLDW+ + A + +QGN+DP L
Sbjct: 240 GRRVPVILFTKNGGQWLESIAD-SGADAVGLDWTTDIGNARARIGDRVALQGNMDPAMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL GSG IFNLGHGITP VDP++ ++ V
Sbjct: 299 APPERIRQEVADILRRFGSGNGHIFNLGHGITPDVDPEHAKAFIEAV 345
>gi|49086972|gb|AAT51403.1| PA5034 [synthetic construct]
Length = 356
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|15600227|ref|NP_253721.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAO1]
gi|254244082|ref|ZP_04937404.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 2192]
gi|12229804|sp|P95458|DCUP_PSEAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|9951323|gb|AAG08419.1|AE004916_8 uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAO1]
gi|126197460|gb|EAZ61523.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 2192]
Length = 355
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|317494903|ref|ZP_07953313.1| uroporphyrinogen decarboxylase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917091|gb|EFV38440.1| uroporphyrinogen decarboxylase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 354
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITCKADVEKLPVPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELGYVMNAVRTIRKNLAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKIADSVILYLNAQIKAGAQSVMIFDTWGGVLTPRDYREFSLNYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDWS ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWSTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 299 APAARIEQEVSTILEGFGHGTGHVFNLGHGIHQDVPPEHAGTFVEAVH 346
>gi|330964730|gb|EGH64990.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 354
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLLREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|149377291|ref|ZP_01895037.1| uroporphyrinogen decarboxylase [Marinobacter algicola DG893]
gi|149358388|gb|EDM46864.1| uroporphyrinogen decarboxylase [Marinobacter algicola DG893]
Length = 356
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 190/351 (54%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R K +FL +C E+T
Sbjct: 1 MTELKNDRFLRALMRQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL I DALG + F EGP+ + + + P I+ ++
Sbjct: 61 LQPLERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFRNTVRSAADVAALPKINAEVD 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R L + LIGF G+PWT+A+YMI GG KD + + Y +
Sbjct: 121 -LDYVMNAVSTIRGALNGSVPLIGFSGSPWTLATYMIEGGSSKDFREAKKLMYGQPEVMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL QI AG +QIFDT G L ++ ++ + +I++ + R+
Sbjct: 180 QLLDHLADSVIDYLNGQIRAGAQAVQIFDTWGGVLSSWAYQEFSLNYMKKIVAGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F K G L++ + ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVILFTKNGGQWLESIAE-SGADAVGLDWTTDIGKARARIGDQVALQGNMDPAMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+GP IFNLGHGITP VDP++ ++ V
Sbjct: 299 APPERIRQEVADILSRYGTGPGHIFNLGHGITPDVDPEHAGAFIRAVTELS 349
>gi|126666710|ref|ZP_01737687.1| uroporphyrinogen decarboxylase [Marinobacter sp. ELB17]
gi|126628755|gb|EAZ99375.1| uroporphyrinogen decarboxylase [Marinobacter sp. ELB17]
Length = 355
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 187/347 (53%), Gaps = 8/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L G ++ P+W+MRQAGRYLPEYR R K +FL +C E+T
Sbjct: 1 MTELKNDRFLRALMGQPVDRTPVWMMRQAGRYLPEYRATRAKAGDFLSLCKNTPLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL I DALG + F EGP+ I + P I+ ++
Sbjct: 61 LQPLERFPLDAAILFSDILTIPDALGLGLYFETGEGPKFKHTIRSAADVDALPKINAEVD 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R L + LIGF G+PWT+A+YM+ GG KD + + Y +
Sbjct: 121 -LDYVMNAVSTIRSALNGRVPLIGFSGSPWTLATYMVEGGSSKDFREAKKLMYGQPEVMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D +YL QI AG V+QIFDT G L +E ++ + + +II+ + +
Sbjct: 180 KLLDHLADAVTDYLNGQIRAGAQVVQIFDTWGGVLSTWAYEEFSLKYMRKIIAGLNLESE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRKVPVIVFTKNGGQWLESIAD-CGADAVGLDWTTDIGSARARVGDKVALQGNMDPTMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G IFNLGHGITP VDP + ++ V
Sbjct: 299 APPARIREEVGDILRRFGHGTGHIFNLGHGITPDVDPAHAGAFIEAV 345
>gi|90416469|ref|ZP_01224400.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2207]
gi|90331668|gb|EAS46896.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2207]
Length = 352
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 191/351 (54%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEYR +R + +F+ +C E E+T
Sbjct: 1 MSELKNDRFLKALMRRPVDRTPVWMMRQAGRYLPEYRAVRAQAGDFMSLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL I DA+G + F EGP+ P+ T+ ID +
Sbjct: 61 LQPLERYEMDAAILFSDILTIPDAMGLGLYFETGEGPKFRKPVRTEADIDALEVIDTA-S 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + +++++R++L + LIGF G+PWT+A+YM+ G +D + + Y +
Sbjct: 120 DLAYVTDAVTMIRRELNGRVPLIGFSGSPWTLATYMVEGQSSRDFARAKTMLYTQPELMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ LS +YL AQI AG V+QIFDT G L + ++ + +I+ + +
Sbjct: 180 QLLEKLSLSVIDYLNAQIRAGAQVVQIFDTWGGALSHAAYAEFSLAYMQKIVDGLISHHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ T +A+GLDWS ++ A + +QGN+DP L
Sbjct: 240 GRDVPVILFTKGGGLWLEKMAD-TGCHALGLDWSTDIAAAKGRVGDRVALQGNMDPAVLR 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ V +IL G+G IFNLGHGITP ++P +V + V
Sbjct: 299 ADPAVIESQVESILKGFGAGSGHIFNLGHGITPDINPDHVKVFIDAVHKFS 349
>gi|90407134|ref|ZP_01215322.1| uroporphyrinogen decarboxylase [Psychromonas sp. CNPT3]
gi|90311710|gb|EAS39807.1| uroporphyrinogen decarboxylase [Psychromonas sp. CNPT3]
Length = 355
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + + L ++ P+W+MRQAGRYLPEY+ +R + +F+ +C + E+T
Sbjct: 1 MTELKNDRYIRALLKQEVDKTPVWMMRQAGRYLPEYKALRAQAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RR++ DAAILFSDIL I DA+G + F EGP+ + + + + N +
Sbjct: 61 MQPLRRFDLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPISCKKDVDNLIMPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ + +
Sbjct: 121 LQYVMNAVRRIRQELDGSVPLIGFSGSPWTLATYMVEGGTSKAFTKIKKMAFADPAILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AGV + IFDT G L ++E ++ + + +I+ + R Y
Sbjct: 181 LLDKLADSVIQYLNAQIEAGVQSVMIFDTWGGVLSPRDYELFSLQYMHKIVDGLHRTYAG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T + IGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 QKIPVTLFTKNGGQWLEKIAA-TGCDCIGLDWTIDIATAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G+G IFNLGHGI V P+N V V
Sbjct: 300 SGSRIRQEVDTILKGYGNGVGHIFNLGHGIHQDVPPENAKIFVDAVHELS 349
>gi|257483517|ref|ZP_05637558.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289623919|ref|ZP_06456873.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289648185|ref|ZP_06479528.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330865729|gb|EGH00438.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|331009599|gb|EGH89655.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 354
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|107104134|ref|ZP_01368052.1| hypothetical protein PaerPA_01005207 [Pseudomonas aeruginosa PACS2]
gi|218894133|ref|YP_002443002.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa LESB58]
gi|226723876|sp|B7V3C7|DCUP_PSEA8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218774361|emb|CAW30178.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa LESB58]
Length = 355
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 187/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLTYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|320322048|gb|EFW78144.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320330846|gb|EFW86820.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330984721|gb|EGH82824.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 354
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|26991750|ref|NP_747175.1| uroporphyrinogen decarboxylase [Pseudomonas putida KT2440]
gi|38257478|sp|Q88CV6|DCUP_PSEPK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|24986857|gb|AAN70639.1|AE016707_9 uroporphyrinogen decarboxylase [Pseudomonas putida KT2440]
Length = 354
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 189/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + + L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRKEVARILASYGHGTGHVFNLGHGITPEVDPEHAGAFINAVHELS 349
>gi|88797641|ref|ZP_01113230.1| uroporphyrinogen decarboxylase [Reinekea sp. MED297]
gi|88779813|gb|EAR10999.1| uroporphyrinogen decarboxylase [Reinekea sp. MED297]
Length = 354
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 128/346 (36%), Positives = 189/346 (54%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEYR+ R + +FL +C + E+T
Sbjct: 1 MSELQNDRFLKALLKEPVDRTPVWMMRQAGRYLPEYRETRSQAGDFLSLCKNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL + DA+G + F EGP+ E L +
Sbjct: 61 LQPLDRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPKFKHTVRSEQDLSRLQTPKMDDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R +L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LKYVMNAVSTIRSELNGRVPLIGFTGSPWTLATYMVEGGSSKDFRHIKAMMYSQPDVLHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D +YL AQI AG +QIFD+ G LG + +++ + RII+ ++R++
Sbjct: 181 LLSRLADTVTDYLNAQIDAGAQAVQIFDSWGGALGHQAYLDFSLAYMNRIIAGLKREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ + ++A+GLDW+ L+ A + + +QGN+DP L
Sbjct: 241 RKVPVILFTKGGGQWLEAMAD-SGADALGLDWTTSLTDARQRVGDKVALQGNMDPCVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ D V IL GSG +FNLGHGI VDP + V+ V
Sbjct: 300 SPDRIRDEVERILAEYGSGTGHVFNLGHGIQQFVDPDHAGAFVEAV 345
>gi|296391881|ref|ZP_06881356.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PAb1]
Length = 355
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPERDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGRARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|192360733|ref|YP_001983598.1| uroporphyrinogen decarboxylase [Cellvibrio japonicus Ueda107]
gi|238058012|sp|B3PDU1|DCUP_CELJU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|190686898|gb|ACE84576.1| uroporphyrinogen decarboxylase [Cellvibrio japonicus Ueda107]
Length = 356
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+T
Sbjct: 1 MTPLNNDRFLRALLRQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMGLCTNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGP+ E + +
Sbjct: 61 LQPLERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFHKAVRTEADVNALKVINPEQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YMI GG +D + + Y +
Sbjct: 121 LPYVVNAVKTIRRELNGRVPLIGFSGSPWTLATYMIEGGSSRDFRRAKEMLYNQPEVMHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L++ YL AQI AG +QIFDT G L + + ++ + + +I++ + ++
Sbjct: 181 LLDVLAESVIVYLNAQIRAGAQAVQIFDTWGGALSHNAYREFSLKYMEKIVAGLIGEHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L T + A+GLDW+ ++ A + +QGN+DP L
Sbjct: 241 RQVPVILFTKGGGQWLDAMAD-TGATALGLDWTTDIAAARARVGNRVALQGNMDPGILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G IFNLGHGITP+VDP++ ++ V
Sbjct: 300 SPERIRAEVGNILAAYGQGSGHIFNLGHGITPEVDPEHAGAFIRAVH 346
>gi|170724657|ref|YP_001758683.1| uroporphyrinogen decarboxylase [Shewanella woodyi ATCC 51908]
gi|238058111|sp|B1KN91|DCUP_SHEWM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169810004|gb|ACA84588.1| uroporphyrinogen decarboxylase [Shewanella woodyi ATCC 51908]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGPR T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 300 SPERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGAFINSVHELS 349
>gi|293394033|ref|ZP_06638337.1| uroporphyrinogen decarboxylase [Serratia odorifera DSM 4582]
gi|291423473|gb|EFE96698.1| uroporphyrinogen decarboxylase [Serratia odorifera DSM 4582]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 186/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPITCRAEVEKLPLFDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELKGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R++
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTCDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + V IL G G +FNLGHGI V P+N V V +
Sbjct: 299 AAPQRIEQEVETILAGFGHGEGHVFNLGHGIHQDVPPENAGVFVDAVHALS 349
>gi|317046452|ref|YP_004114100.1| uroporphyrinogen decarboxylase [Pantoea sp. At-9b]
gi|316948069|gb|ADU67544.1| uroporphyrinogen decarboxylase [Pantoea sp. At-9b]
Length = 355
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSHPITCRADVDKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRHNLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG I +FDT G L ++ ++ + +I+ +V +
Sbjct: 180 ALLDKLADSVILYLNAQIKAGAQSIMVFDTWGGVLTGRDYREFSLYYMHKIVDSVLHENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDWS ++ A + + +QGN+DP L
Sbjct: 240 GRRVPITLFTKGGGQWLEAIAE-TGCDALGLDWSTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEQEVASILEGFGKGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|71281343|ref|YP_267206.1| uroporphyrinogen decarboxylase [Colwellia psychrerythraea 34H]
gi|123634019|sp|Q489Q8|DCUP_COLP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71147083|gb|AAZ27556.1| uroporphyrinogen decarboxylase [Colwellia psychrerythraea 34H]
Length = 355
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 119/348 (34%), Positives = 186/348 (53%), Gaps = 7/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + L L ++ P+W+MRQAGRYLPEYR++RK +F+ +C E E+T
Sbjct: 1 MTELKNDTYLRALLKQPVDYTPVWMMRQAGRYLPEYREVRKNAGDFMSVCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + + +
Sbjct: 61 IQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIAVPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK+L + LIGF G+PWT+A+YMI GG K + + + + +
Sbjct: 121 LGYVMNAVRTIRKELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMFAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L ++ ++ + + +I+ + R
Sbjct: 181 LLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYNEFSLQYMAKIVDGLTRHNEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L++ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTIDIENAKARVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ IL G G +FNLGHGI P V+P + +++V
Sbjct: 300 PLPRIEQEVSKILSGFGEGGTGHVFNLGHGIHPDVNPDHAGHFIESVH 347
>gi|254238258|ref|ZP_04931581.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa C3719]
gi|126170189|gb|EAZ55700.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa C3719]
Length = 355
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 188/347 (54%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+++C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMNLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLTYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|298485073|ref|ZP_07003170.1| Uroporphyrinogen III decarboxylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160483|gb|EFI01507.1| Uroporphyrinogen III decarboxylase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLEKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|88861407|ref|ZP_01136036.1| uroporphyrinogen decarboxylase [Pseudoalteromonas tunicata D2]
gi|88816582|gb|EAR26408.1| uroporphyrinogen decarboxylase [Pseudoalteromonas tunicata D2]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 191/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR +R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDATPVWMMRQAGRYLPEYRALRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + ++N I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLHFETGEGPRFERPIMDMRDVVNLPIPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K G+ + A+ +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFGKIKKMAFAEPEILHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I++ + R+Y
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQSVMIFDTWGGILTPRDYREFSLGYMDKIVAGLIREYDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKNGGMWLEAMAA-TGCDALGLDWTIDIADAKARVGDKVALQGNMDPAMLHA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ILD G G +FNLGHGITP VDP+N + +V
Sbjct: 300 SPERIRQEVQKILDGFGQGSGHVFNLGHGITPDVDPENAGAFINSVHELS 349
>gi|291615775|ref|YP_003518517.1| HemE [Pantoea ananatis LMG 20103]
gi|291150805|gb|ADD75389.1| HemE [Pantoea ananatis LMG 20103]
gi|327396041|dbj|BAK13463.1| uroporphyrinogen decarboxylase heme [Pantoea ananatis AJ13355]
Length = 356
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGP +PIT + P D
Sbjct: 61 LQPLRRFKLDAAILFSDILTIPDAMGLGLYFETGEGPCFSNPITCRADVDRLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + +FDT G L +++ ++ + +I+ +V +
Sbjct: 180 AMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGNDYREFSLYYMHKIVDSVLHENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G L+ T +A+GLDW++ +S A + + +QGN+DP L
Sbjct: 240 GRRVPITLFTKNGGQWLEAIAE-TGCDALGLDWTIDISEARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEQEVATILEGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|300115530|ref|YP_003762105.1| uroporphyrinogen decarboxylase [Nitrosococcus watsonii C-113]
gi|299541467|gb|ADJ29784.1| uroporphyrinogen decarboxylase [Nitrosococcus watsonii C-113]
Length = 356
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 195/350 (55%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR++R K +FL +C TPE E+TLQP+
Sbjct: 5 KNDRFLRALLRQPVDRTPVWIMRQAGRYLPEYREVRAKAGDFLTLCTTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLN--PNIDLFLNYL 120
R++ DAAI+FSDIL I A+G + F + EGPR + P+ T P+ + L Y
Sbjct: 65 HRFDLDAAIIFSDILTIPHAMGLGLYFSKGEGPRFERPVRTNNQVSALGVPDPESDLGY- 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + R++L + LIGF G+PWT+A YM+ GG KD + ++ + + L
Sbjct: 124 --VMEALRLTRRELDGRVPLIGFSGSPWTLACYMVEGGSSKDFALIKGLMFEQPQVMHHL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L+ L+ YL AQI AG + +FD+ G L ++++++ + RI+ + R+
Sbjct: 182 LEVLAQAVTVYLNAQIAAGAQAVMLFDSWGGALSHRDYQDFSLSYMARIVEGLMRENEGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I F KG G L+ +A+G+DW+V L+ A + K+ +QGN+DP L
Sbjct: 242 QVPVILFTKGGGLWLEAMVE-AGCDALGVDWTVDLAKARMRVGKQVALQGNMDPCVLYAS 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V+ I+ G+G IFNLGHGI P V P+ V LV V +
Sbjct: 301 SARVRREVSEIIKAYGAGSGHIFNLGHGIHPTVKPEKVTALVDAVHELSV 350
>gi|293417499|ref|ZP_06660122.1| uroporphyrinogen decarboxylase [Escherichia coli B185]
gi|291430826|gb|EFF03823.1| uroporphyrinogen decarboxylase [Escherichia coli B185]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVETILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|163748637|ref|ZP_02155890.1| uroporphyrinogen decarboxylase [Shewanella benthica KT99]
gi|161331747|gb|EDQ02551.1| uroporphyrinogen decarboxylase [Shewanella benthica KT99]
Length = 354
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ IR + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLQQPVDRTPVWMMRQAGRYLPEYKAIRAQAGDFMSLCRDKDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGPR T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIRKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPITLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGDKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP++ +K+V
Sbjct: 300 SPERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPEHAGAFIKSVHELS 349
>gi|104779618|ref|YP_606116.1| uroporphyrinogen decarboxylase [Pseudomonas entomophila L48]
gi|166234273|sp|Q1IGA3|DCUP_PSEE4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|95108605|emb|CAK13299.1| uroporphyrinogen decarboxylase [Pseudomonas entomophila L48]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 190/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVISTLADIEALPIPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRKEVARILASYGKGSGHVFNLGHGITPEVDPEHAGVFINAVHELS 349
>gi|330828457|ref|YP_004391409.1| Uroporphyrinogen decarboxylase [Aeromonas veronii B565]
gi|328803593|gb|AEB48792.1| Uroporphyrinogen decarboxylase [Aeromonas veronii B565]
Length = 355
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 189/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MKELKNDRYLRALLRQDVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F + EGPR + PIT+ P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPITSMADVQALPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R++
Sbjct: 180 LLLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIREHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGQWLEQIAA-TGCDALGLDWTTDIADAKRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V+P++ V V
Sbjct: 299 ATPARIREEVASILAGFGHGNGHVFNLGHGIHQDVNPEHAGVFVNAVHELS 349
>gi|270265435|ref|ZP_06193694.1| uroporphyrinogen decarboxylase [Serratia odorifera 4Rx13]
gi|270040628|gb|EFA13733.1| uroporphyrinogen decarboxylase [Serratia odorifera 4Rx13]
Length = 355
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 188/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 2 MNELKNDRYLRALQRMPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT++ P D +
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFSSPITSRADVDKLPVFDPEVE 121
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 122 -LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 181 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLREND 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P+N V+ V ++
Sbjct: 300 ASPERIGQEVETILAGFGHGEGHVFNLGHGIHLDVPPENAGVFVEAVHAQS 350
>gi|262273294|ref|ZP_06051109.1| uroporphyrinogen III decarboxylase [Grimontia hollisae CIP 101886]
gi|262222667|gb|EEY73977.1| uroporphyrinogen III decarboxylase [Grimontia hollisae CIP 101886]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPKFERPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRKGLEGKVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ +++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNDFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T + +GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RCVPVTLFTKNGGMWLEKIAA-TGCDGVGLDWTVDMADAKRRIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL+ G+G +FNLGHGI V P+N V V
Sbjct: 300 SPARIRQEVATILEGFGNGSGHVFNLGHGIHLDVPPENAGVFVDAVHELS 349
>gi|183597474|ref|ZP_02958967.1| hypothetical protein PROSTU_00749 [Providencia stuartii ATCC 25827]
gi|188023224|gb|EDU61264.1| hypothetical protein PROSTU_00749 [Providencia stuartii ATCC 25827]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 184/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDTTPVWMMRQAGRYLPEYKATRAQAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PIT P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKPITCLNDIKNIPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ A +
Sbjct: 121 -LGYVMDAVRAIRKALKGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG I IFDT G L + ++ ++ + +II + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSIMIFDTWGGVLTKRDYLQFSLHYMHKIIDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRCVPVTLFTKGGGQWLEEMAA-TGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APIPRIEEEVQNILAGFGQGNGHVFNLGHGIHQDVPPEHAGAFVDAVHRFS 349
>gi|119773528|ref|YP_926268.1| uroporphyrinogen decarboxylase [Shewanella amazonensis SB2B]
gi|166234284|sp|A1S2J2|DCUP_SHEAM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119766028|gb|ABL98598.1| Uroporphyrinogen decarboxylase [Shewanella amazonensis SB2B]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 188/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR + T E P D +
Sbjct: 61 LQPLRRYELDAAILFSDILTIPDAMGLGLYFEAGEGPRFERKADTLEAIKALPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + Y A +
Sbjct: 120 ELGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKRMMYSEPMALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI G + IFD+ G L + ++ R + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIANGAQSVMIFDSWGGALSHSAYREFSLRYMQKIVDGLTREAD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L++ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V +
Sbjct: 299 APIPRIEEEVEQILAGFGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHEKS 349
>gi|28872231|ref|NP_794850.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969454|ref|ZP_03397591.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato T1]
gi|301382665|ref|ZP_07231083.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
Max13]
gi|302061842|ref|ZP_07253383.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
K40]
gi|302130958|ref|ZP_07256948.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|38257459|sp|Q87V23|DCUP_PSESM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28855485|gb|AAO58545.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925825|gb|EEB59383.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. tomato T1]
gi|331016019|gb|EGH96075.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIAEI-GADTLGLDWTCDIGEARQRVGNKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|313110071|ref|ZP_07795974.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 39016]
gi|310882476|gb|EFQ41070.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa 39016]
Length = 355
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWACDIGSARTRVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|289676466|ref|ZP_06497356.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
FF5]
Length = 354
Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVISYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|148550149|ref|YP_001270251.1| uroporphyrinogen decarboxylase [Pseudomonas putida F1]
gi|166234275|sp|A5WAA7|DCUP_PSEP1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148514207|gb|ABQ81067.1| uroporphyrinogen decarboxylase [Pseudomonas putida F1]
Length = 354
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 189/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + + L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAD-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRKEVARILASYGHGTGHVFNLGHGITPEVDPEHAGVFINAVHELS 349
>gi|116053182|ref|YP_793503.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122256803|sp|Q02EY3|DCUP_PSEAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115588403|gb|ABJ14418.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 355
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLVYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|70733959|ref|YP_257599.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf-5]
gi|123658487|sp|Q4KJI4|DCUP_PSEF5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|68348258|gb|AAY95864.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf-5]
Length = 355
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 190/347 (54%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRANAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHLLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+S + R++
Sbjct: 185 KLAQSVTAYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVSGLIREHDGRKV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ ++++GLDW+ + A + + +QGN+DP L Q
Sbjct: 245 PVILFTKGGGLWLESIAD-AGADSLGLDWTCDIGEARRRVGSKVSLQGNMDPTVLYANPQ 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+V P++ ++ V
Sbjct: 304 AIRSEVARILASYGKGSGHVFNLGHGITPEVKPEHAGAFLEAVHELS 350
>gi|71733761|ref|YP_272707.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123638607|sp|Q48PG2|DCUP_PSE14 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71554314|gb|AAZ33525.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 354
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVSTLADIEALPIPDAQKD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R++
Sbjct: 181 LLDKLAQSVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + +
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAIHELS 349
>gi|197286603|ref|YP_002152475.1| uroporphyrinogen decarboxylase [Proteus mirabilis HI4320]
gi|238056495|sp|B4EYT8|DCUP_PROMH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194684090|emb|CAR45475.1| uroporphyrinogen decarboxylase [Proteus mirabilis HI4320]
Length = 357
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI + + P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKTPINSLDDIKKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R L ++ LIGF G+PWT+A+YMI GG K + + Y +A +
Sbjct: 120 ELGYVMNAVRAIRHALQGNVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYSEPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG I IFDT G L +++ ++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLQYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGRWLEAMAA-TGCDALGLDWTIDIEDARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI V P + + V
Sbjct: 299 APPARIEQEVATILAGFGKGTGHVFNLGHGIHQDVPPAHAGAFIDAVH 346
>gi|304399311|ref|ZP_07381176.1| uroporphyrinogen decarboxylase [Pantoea sp. aB]
gi|304353167|gb|EFM17549.1| uroporphyrinogen decarboxylase [Pantoea sp. aB]
Length = 355
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR +P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSNPVTCRADVERLPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 -LGYVMNAVRTIRKNLNGDLPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 AMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIDDARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL+ GSG +FNLGHGI V P+N V+ V
Sbjct: 299 AAPERIEQEVAGILERFGSGTGHVFNLGHGIHQDVPPENAGVFVEAVH 346
>gi|26250768|ref|NP_756808.1| uroporphyrinogen decarboxylase [Escherichia coli CFT073]
gi|91212796|ref|YP_542782.1| uroporphyrinogen decarboxylase [Escherichia coli UTI89]
gi|117626259|ref|YP_859582.1| uroporphyrinogen decarboxylase [Escherichia coli APEC O1]
gi|215489329|ref|YP_002331760.1| uroporphyrinogen decarboxylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218561063|ref|YP_002393976.1| uroporphyrinogen decarboxylase [Escherichia coli S88]
gi|227885473|ref|ZP_04003278.1| uroporphyrinogen decarboxylase [Escherichia coli 83972]
gi|237702764|ref|ZP_04533245.1| uroporphyrinogen decarboxylase [Escherichia sp. 3_2_53FAA]
gi|300979671|ref|ZP_07174643.1| uroporphyrinogen decarboxylase [Escherichia coli MS 45-1]
gi|301047731|ref|ZP_07194790.1| uroporphyrinogen decarboxylase [Escherichia coli MS 185-1]
gi|312965350|ref|ZP_07779583.1| uroporphyrinogen decarboxylase [Escherichia coli 2362-75]
gi|331660557|ref|ZP_08361490.1| uroporphyrinogen decarboxylase [Escherichia coli TA206]
gi|29611768|sp|Q8FB74|DCUP_ECOL6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122422155|sp|Q1R5W3|DCUP_ECOUT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234247|sp|A1AIG8|DCUP_ECOK1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723869|sp|B7MIY3|DCUP_ECO45 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767693|sp|B7UPF2|DCUP_ECO27 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|26111199|gb|AAN83382.1|AE016770_182 Uroporphyrinogen decarboxylase [Escherichia coli CFT073]
gi|91074370|gb|ABE09251.1| uroporphyrinogen decarboxylase [Escherichia coli UTI89]
gi|115515383|gb|ABJ03458.1| uroporphyrinogen decarboxylase [Escherichia coli APEC O1]
gi|215267401|emb|CAS11852.1| uroporphyrinogen decarboxylase [Escherichia coli O127:H6 str.
E2348/69]
gi|218367832|emb|CAR05627.1| uroporphyrinogen decarboxylase [Escherichia coli S88]
gi|222035708|emb|CAP78453.1| Uroporphyrinogen decarboxylase [Escherichia coli LF82]
gi|226903077|gb|EEH89336.1| uroporphyrinogen decarboxylase [Escherichia sp. 3_2_53FAA]
gi|227837547|gb|EEJ48013.1| uroporphyrinogen decarboxylase [Escherichia coli 83972]
gi|281181061|dbj|BAI57391.1| uroporphyrinogen decarboxylase [Escherichia coli SE15]
gi|294493449|gb|ADE92205.1| uroporphyrinogen decarboxylase [Escherichia coli IHE3034]
gi|300300396|gb|EFJ56781.1| uroporphyrinogen decarboxylase [Escherichia coli MS 185-1]
gi|300409455|gb|EFJ92993.1| uroporphyrinogen decarboxylase [Escherichia coli MS 45-1]
gi|307556140|gb|ADN48915.1| uroporphyrinogen decarboxylase [Escherichia coli ABU 83972]
gi|307628386|gb|ADN72690.1| uroporphyrinogen decarboxylase [Escherichia coli UM146]
gi|312290024|gb|EFR17911.1| uroporphyrinogen decarboxylase [Escherichia coli 2362-75]
gi|312948571|gb|ADR29398.1| uroporphyrinogen decarboxylase [Escherichia coli O83:H1 str. NRG
857C]
gi|315288342|gb|EFU47741.1| uroporphyrinogen decarboxylase [Escherichia coli MS 110-3]
gi|315294346|gb|EFU53697.1| uroporphyrinogen decarboxylase [Escherichia coli MS 153-1]
gi|315300740|gb|EFU59965.1| uroporphyrinogen decarboxylase [Escherichia coli MS 16-3]
gi|320197108|gb|EFW71726.1| Uroporphyrinogen III decarboxylase [Escherichia coli WV_060327]
gi|323190146|gb|EFZ75424.1| uroporphyrinogen decarboxylase [Escherichia coli RN587/1]
gi|323948832|gb|EGB44729.1| uroporphyrinogen decarboxylase [Escherichia coli H252]
gi|323953791|gb|EGB49598.1| uroporphyrinogen decarboxylase [Escherichia coli H263]
gi|324009483|gb|EGB78702.1| uroporphyrinogen decarboxylase [Escherichia coli MS 57-2]
gi|331052340|gb|EGI24378.1| uroporphyrinogen decarboxylase [Escherichia coli TA206]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|308188917|ref|YP_003933048.1| uroporphyrinogen decarboxylase [Pantoea vagans C9-1]
gi|308059427|gb|ADO11599.1| uroporphyrinogen decarboxylase [Pantoea vagans C9-1]
Length = 355
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR +P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFSNPVTCRADVERLPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 -LGYVMNAVRTIRKNLNGDLPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 AMLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIDDARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL+ GSG +FNLGHGI V P+N V V
Sbjct: 299 AAPERIEQEVAGILERFGSGTGHVFNLGHGIHQDVPPENAGVFVDAVH 346
>gi|306812012|ref|ZP_07446220.1| uroporphyrinogen decarboxylase [Escherichia coli NC101]
gi|305854617|gb|EFM55053.1| uroporphyrinogen decarboxylase [Escherichia coli NC101]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-E 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|251791425|ref|YP_003006146.1| uroporphyrinogen decarboxylase [Dickeya zeae Ech1591]
gi|247540046|gb|ACT08667.1| uroporphyrinogen decarboxylase [Dickeya zeae Ech1591]
Length = 357
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 182/352 (51%), Gaps = 8/352 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR P+T P D L
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPIPDPELE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + R +
Sbjct: 121 -LGYVMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPRTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGADYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G+G +FNLGHGI V P++ V+ V +
Sbjct: 299 APPARIEQEVATILAGFGTGNGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSV 350
>gi|15834174|ref|NP_312947.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
Sakai]
gi|168752038|ref|ZP_02777060.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4113]
gi|168758607|ref|ZP_02783614.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4401]
gi|168764577|ref|ZP_02789584.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4501]
gi|168771469|ref|ZP_02796476.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4486]
gi|168777390|ref|ZP_02802397.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4196]
gi|168780382|ref|ZP_02805389.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4076]
gi|168790357|ref|ZP_02815364.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC869]
gi|168798369|ref|ZP_02823376.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC508]
gi|195939623|ref|ZP_03085005.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4024]
gi|208808730|ref|ZP_03251067.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4206]
gi|208813578|ref|ZP_03254907.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4045]
gi|208818935|ref|ZP_03259255.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4042]
gi|209398331|ref|YP_002273513.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4115]
gi|217326346|ref|ZP_03442430.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14588]
gi|254795995|ref|YP_003080832.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14359]
gi|261227291|ref|ZP_05941572.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257038|ref|ZP_05949571.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
FRIK966]
gi|23813992|sp|Q8X6X5|DCUP_ECO57 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696374|sp|B5Z093|DCUP_ECO5E RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13364396|dbj|BAB38343.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
Sakai]
gi|187767364|gb|EDU31208.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4196]
gi|188014036|gb|EDU52158.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4113]
gi|189001799|gb|EDU70785.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4076]
gi|189354597|gb|EDU73016.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4401]
gi|189359758|gb|EDU78177.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4486]
gi|189365451|gb|EDU83867.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4501]
gi|189370169|gb|EDU88585.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC869]
gi|189379217|gb|EDU97633.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC508]
gi|208728531|gb|EDZ78132.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4206]
gi|208734855|gb|EDZ83542.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4045]
gi|208739058|gb|EDZ86740.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4042]
gi|209159731|gb|ACI37164.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EC4115]
gi|209751708|gb|ACI74161.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751710|gb|ACI74162.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751712|gb|ACI74163.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209751716|gb|ACI74165.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|217322567|gb|EEC30991.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14588]
gi|254595395|gb|ACT74756.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
TW14359]
gi|320190906|gb|EFW65556.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
EC1212]
gi|320639088|gb|EFX08728.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
G5101]
gi|320644482|gb|EFX13545.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H- str.
493-89]
gi|320649801|gb|EFX18322.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H- str. H
2687]
gi|320665896|gb|EFX32927.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
LSU-61]
gi|326347152|gb|EGD70882.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
1125]
gi|326347597|gb|EGD71319.1| Uroporphyrinogen III decarboxylase [Escherichia coli O157:H7 str.
1044]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ A YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|167036113|ref|YP_001671344.1| uroporphyrinogen decarboxylase [Pseudomonas putida GB-1]
gi|189083014|sp|B0KN28|DCUP_PSEPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166862601|gb|ABZ01009.1| uroporphyrinogen decarboxylase [Pseudomonas putida GB-1]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 188/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + I L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPIPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDRVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRQEVARILASYGQGTGHVFNLGHGITPEVDPEHAGVFINAVHELS 349
>gi|315122035|ref|YP_004062524.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495437|gb|ADR52036.1| uroporphyrinogen decarboxylase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 346
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 287/345 (83%), Positives = 314/345 (91%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN++KQKIL+VL+GN+I PPPIWLMRQAGRYLPEYR+IRKK KNFL+MCYTPEY VE+T+
Sbjct: 1 MNKQKQKILQVLKGNIITPPPIWLMRQAGRYLPEYREIRKKNKNFLNMCYTPEYVVEITM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPI RY FDAAILFSDILVI DALGRNVRF+ENEGP+MDPIT +EIY LNPNID LNYL
Sbjct: 61 QPIHRYKFDAAILFSDILVIPDALGRNVRFIENEGPKMDPITVKEIYGLNPNIDFILNYL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
IF+SISILRKKLPN+ITLIGFCGAPWTVASYMISG KDH + R+FAYQN+ AFNWL
Sbjct: 121 SSIFKSISILRKKLPNNITLIGFCGAPWTVASYMISGCPTKDHTETRIFAYQNNHAFNWL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LDFLSD+SAEYLIAQI +GVDVIQIFDTHAG LGE EFENYAA+ VGRIISAVR+K PNA
Sbjct: 181 LDFLSDISAEYLIAQIRSGVDVIQIFDTHAGFLGECEFENYAAKPVGRIISAVRKKCPNA 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGYMLKNYR+LTDSNAI LDWSVPLSFA +LQKEGPVQGNLDPMRLVVGN+V
Sbjct: 241 QIITFAKGAGYMLKNYRQLTDSNAISLDWSVPLSFAFDLQKEGPVQGNLDPMRLVVGNKV 300
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
M DGV AILD LGSGP IFNLGHGITPQVDPKNVLDLV+TVRS K
Sbjct: 301 MKDGVKAILDTLGSGPLIFNLGHGITPQVDPKNVLDLVETVRSGK 345
>gi|16131827|ref|NP_418425.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
gi|74314491|ref|YP_312910.1| uroporphyrinogen decarboxylase [Shigella sonnei Ss046]
gi|89110041|ref|AP_003821.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
W3110]
gi|157158608|ref|YP_001465492.1| uroporphyrinogen decarboxylase [Escherichia coli E24377A]
gi|157163466|ref|YP_001460784.1| uroporphyrinogen decarboxylase [Escherichia coli HS]
gi|170022000|ref|YP_001726954.1| uroporphyrinogen decarboxylase [Escherichia coli ATCC 8739]
gi|170083458|ref|YP_001732778.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
DH10B]
gi|170683454|ref|YP_001746381.1| uroporphyrinogen decarboxylase [Escherichia coli SMS-3-5]
gi|187733317|ref|YP_001882683.1| uroporphyrinogen decarboxylase [Shigella boydii CDC 3083-94]
gi|188491734|ref|ZP_02999004.1| uroporphyrinogen decarboxylase [Escherichia coli 53638]
gi|191168667|ref|ZP_03030448.1| uroporphyrinogen decarboxylase [Escherichia coli B7A]
gi|193066418|ref|ZP_03047465.1| uroporphyrinogen decarboxylase [Escherichia coli E22]
gi|193067936|ref|ZP_03048902.1| uroporphyrinogen decarboxylase [Escherichia coli E110019]
gi|194429956|ref|ZP_03062465.1| uroporphyrinogen decarboxylase [Escherichia coli B171]
gi|194439790|ref|ZP_03071857.1| uroporphyrinogen decarboxylase [Escherichia coli 101-1]
gi|209921476|ref|YP_002295560.1| uroporphyrinogen decarboxylase [Escherichia coli SE11]
gi|218556552|ref|YP_002389466.1| uroporphyrinogen decarboxylase [Escherichia coli IAI1]
gi|218707616|ref|YP_002415135.1| uroporphyrinogen decarboxylase [Escherichia coli UMN026]
gi|238903054|ref|YP_002928850.1| uroporphyrinogen decarboxylase [Escherichia coli BW2952]
gi|253775373|ref|YP_003038204.1| uroporphyrinogen decarboxylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254039254|ref|ZP_04873303.1| uroporphyrinogen decarboxylase [Escherichia sp. 1_1_43]
gi|254163939|ref|YP_003047047.1| uroporphyrinogen decarboxylase [Escherichia coli B str. REL606]
gi|256026313|ref|ZP_05440178.1| uroporphyrinogen decarboxylase [Escherichia sp. 4_1_40B]
gi|260846797|ref|YP_003224575.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O103:H2 str.
12009]
gi|260858107|ref|YP_003231998.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O26:H11 str.
11368]
gi|291285412|ref|YP_003502230.1| Uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
CB9615]
gi|293407614|ref|ZP_06651532.1| hemE [Escherichia coli FVEC1412]
gi|298383362|ref|ZP_06992954.1| uroporphyrinogen decarboxylase [Escherichia coli FVEC1302]
gi|300819809|ref|ZP_07099996.1| uroporphyrinogen decarboxylase [Escherichia coli MS 107-1]
gi|300824622|ref|ZP_07104730.1| uroporphyrinogen decarboxylase [Escherichia coli MS 119-7]
gi|300897588|ref|ZP_07115997.1| uroporphyrinogen decarboxylase [Escherichia coli MS 198-1]
gi|300919415|ref|ZP_07135919.1| uroporphyrinogen decarboxylase [Escherichia coli MS 115-1]
gi|300925866|ref|ZP_07141709.1| uroporphyrinogen decarboxylase [Escherichia coli MS 182-1]
gi|300928816|ref|ZP_07144324.1| uroporphyrinogen decarboxylase [Escherichia coli MS 187-1]
gi|300947396|ref|ZP_07161589.1| uroporphyrinogen decarboxylase [Escherichia coli MS 116-1]
gi|300954772|ref|ZP_07167202.1| uroporphyrinogen decarboxylase [Escherichia coli MS 175-1]
gi|301019420|ref|ZP_07183595.1| uroporphyrinogen decarboxylase [Escherichia coli MS 69-1]
gi|301023367|ref|ZP_07187157.1| uroporphyrinogen decarboxylase [Escherichia coli MS 196-1]
gi|301325705|ref|ZP_07219164.1| uroporphyrinogen decarboxylase [Escherichia coli MS 78-1]
gi|301645747|ref|ZP_07245668.1| uroporphyrinogen decarboxylase [Escherichia coli MS 146-1]
gi|307140689|ref|ZP_07500045.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|307315030|ref|ZP_07594616.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|309797701|ref|ZP_07692087.1| uroporphyrinogen decarboxylase [Escherichia coli MS 145-7]
gi|312974217|ref|ZP_07788387.1| uroporphyrinogen decarboxylase [Escherichia coli 1827-70]
gi|331644733|ref|ZP_08345851.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|331655697|ref|ZP_08356687.1| uroporphyrinogen decarboxylase [Escherichia coli M718]
gi|331670851|ref|ZP_08371686.1| uroporphyrinogen decarboxylase [Escherichia coli TA271]
gi|331680120|ref|ZP_08380781.1| uroporphyrinogen decarboxylase [Escherichia coli H591]
gi|331685739|ref|ZP_08386321.1| uroporphyrinogen decarboxylase [Escherichia coli H299]
gi|1352226|sp|P29680|DCUP_ECOLI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123615610|sp|Q3YUY7|DCUP_SHISS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012312|sp|A7ZUL3|DCUP_ECO24 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012313|sp|A8A797|DCUP_ECOHS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083005|sp|B1IUQ0|DCUP_ECOLC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696375|sp|B6I5K8|DCUP_ECOSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723871|sp|B7M7Q6|DCUP_ECO8A RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723872|sp|B7NFT8|DCUP_ECOLU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723873|sp|B1LNU9|DCUP_ECOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229889831|sp|B1XC00|DCUP_ECODH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058112|sp|B2TWI4|DCUP_SHIB3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|259645147|sp|C5A0T8|DCUP_ECOBW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2367337|gb|AAC76971.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
gi|73857968|gb|AAZ90675.1| uroporphyrinogen decarboxylase [Shigella sonnei Ss046]
gi|85676072|dbj|BAE77322.1| uroporphyrinogen decarboxylase [Escherichia coli str. K12 substr.
W3110]
gi|157069146|gb|ABV08401.1| uroporphyrinogen decarboxylase [Escherichia coli HS]
gi|157080638|gb|ABV20346.1| uroporphyrinogen decarboxylase [Escherichia coli E24377A]
gi|169756928|gb|ACA79627.1| uroporphyrinogen decarboxylase [Escherichia coli ATCC 8739]
gi|169891293|gb|ACB05000.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
DH10B]
gi|170521172|gb|ACB19350.1| uroporphyrinogen decarboxylase [Escherichia coli SMS-3-5]
gi|187430309|gb|ACD09583.1| uroporphyrinogen decarboxylase [Shigella boydii CDC 3083-94]
gi|188486933|gb|EDU62036.1| uroporphyrinogen decarboxylase [Escherichia coli 53638]
gi|190901307|gb|EDV61075.1| uroporphyrinogen decarboxylase [Escherichia coli B7A]
gi|192925942|gb|EDV80589.1| uroporphyrinogen decarboxylase [Escherichia coli E22]
gi|192958911|gb|EDV89348.1| uroporphyrinogen decarboxylase [Escherichia coli E110019]
gi|194411985|gb|EDX28298.1| uroporphyrinogen decarboxylase [Escherichia coli B171]
gi|194421287|gb|EDX37307.1| uroporphyrinogen decarboxylase [Escherichia coli 101-1]
gi|209751714|gb|ACI74164.1| uroporphyrinogen decarboxylase [Escherichia coli]
gi|209914735|dbj|BAG79809.1| uroporphyrinogen decarboxylase [Escherichia coli SE11]
gi|218363321|emb|CAR00971.1| uroporphyrinogen decarboxylase [Escherichia coli IAI1]
gi|218434713|emb|CAR15645.1| uroporphyrinogen decarboxylase [Escherichia coli UMN026]
gi|226838489|gb|EEH70519.1| uroporphyrinogen decarboxylase [Escherichia sp. 1_1_43]
gi|238863776|gb|ACR65774.1| uroporphyrinogen decarboxylase [Escherichia coli BW2952]
gi|242379528|emb|CAQ34344.1| uroporphyrinogen decarboxylase [Escherichia coli BL21(DE3)]
gi|253326417|gb|ACT31019.1| uroporphyrinogen decarboxylase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975840|gb|ACT41511.1| uroporphyrinogen decarboxylase [Escherichia coli B str. REL606]
gi|253979996|gb|ACT45666.1| uroporphyrinogen decarboxylase [Escherichia coli BL21(DE3)]
gi|257756756|dbj|BAI28258.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O26:H11 str.
11368]
gi|257761944|dbj|BAI33441.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O103:H2 str.
12009]
gi|260451175|gb|ACX41597.1| uroporphyrinogen decarboxylase [Escherichia coli DH1]
gi|290765285|gb|ADD59246.1| Uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
CB9615]
gi|291425382|gb|EFE98422.1| hemE [Escherichia coli FVEC1412]
gi|298276241|gb|EFI17762.1| uroporphyrinogen decarboxylase [Escherichia coli FVEC1302]
gi|299880887|gb|EFI89098.1| uroporphyrinogen decarboxylase [Escherichia coli MS 196-1]
gi|300318271|gb|EFJ68055.1| uroporphyrinogen decarboxylase [Escherichia coli MS 175-1]
gi|300358664|gb|EFJ74534.1| uroporphyrinogen decarboxylase [Escherichia coli MS 198-1]
gi|300399274|gb|EFJ82812.1| uroporphyrinogen decarboxylase [Escherichia coli MS 69-1]
gi|300413508|gb|EFJ96818.1| uroporphyrinogen decarboxylase [Escherichia coli MS 115-1]
gi|300418056|gb|EFK01367.1| uroporphyrinogen decarboxylase [Escherichia coli MS 182-1]
gi|300453000|gb|EFK16620.1| uroporphyrinogen decarboxylase [Escherichia coli MS 116-1]
gi|300463197|gb|EFK26690.1| uroporphyrinogen decarboxylase [Escherichia coli MS 187-1]
gi|300522871|gb|EFK43940.1| uroporphyrinogen decarboxylase [Escherichia coli MS 119-7]
gi|300527630|gb|EFK48692.1| uroporphyrinogen decarboxylase [Escherichia coli MS 107-1]
gi|300847494|gb|EFK75254.1| uroporphyrinogen decarboxylase [Escherichia coli MS 78-1]
gi|301075996|gb|EFK90802.1| uroporphyrinogen decarboxylase [Escherichia coli MS 146-1]
gi|306905535|gb|EFN36068.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|308118713|gb|EFO55975.1| uroporphyrinogen decarboxylase [Escherichia coli MS 145-7]
gi|309704413|emb|CBJ03762.1| uroporphyrinogen decarboxylase [Escherichia coli ETEC H10407]
gi|310331384|gb|EFP98649.1| uroporphyrinogen decarboxylase [Escherichia coli 1827-70]
gi|315063322|gb|ADT77649.1| uroporphyrinogen decarboxylase [Escherichia coli W]
gi|315138554|dbj|BAJ45713.1| uroporphyrinogen decarboxylase [Escherichia coli DH1]
gi|315617361|gb|EFU97967.1| uroporphyrinogen decarboxylase [Escherichia coli 3431]
gi|320172741|gb|EFW47975.1| Uroporphyrinogen III decarboxylase [Shigella dysenteriae CDC
74-1112]
gi|320200163|gb|EFW74752.1| Uroporphyrinogen III decarboxylase [Escherichia coli EC4100B]
gi|320655134|gb|EFX23090.1| uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660778|gb|EFX28232.1| uroporphyrinogen decarboxylase [Escherichia coli O55:H7 str. USDA
5905]
gi|323155555|gb|EFZ41732.1| uroporphyrinogen decarboxylase [Escherichia coli EPECa14]
gi|323161281|gb|EFZ47191.1| uroporphyrinogen decarboxylase [Escherichia coli E128010]
gi|323167467|gb|EFZ53175.1| uroporphyrinogen decarboxylase [Shigella sonnei 53G]
gi|323174491|gb|EFZ60116.1| uroporphyrinogen decarboxylase [Escherichia coli LT-68]
gi|323380614|gb|ADX52882.1| uroporphyrinogen decarboxylase [Escherichia coli KO11]
gi|323933961|gb|EGB30435.1| uroporphyrinogen decarboxylase [Escherichia coli E1520]
gi|323938886|gb|EGB35106.1| uroporphyrinogen decarboxylase [Escherichia coli E482]
gi|323958924|gb|EGB54599.1| uroporphyrinogen decarboxylase [Escherichia coli H489]
gi|323963784|gb|EGB59283.1| uroporphyrinogen decarboxylase [Escherichia coli M863]
gi|323969071|gb|EGB64379.1| uroporphyrinogen decarboxylase [Escherichia coli TA007]
gi|324017350|gb|EGB86569.1| uroporphyrinogen decarboxylase [Escherichia coli MS 117-3]
gi|324110909|gb|EGC04901.1| uroporphyrinogen decarboxylase [Escherichia fergusonii B253]
gi|327250468|gb|EGE62178.1| uroporphyrinogen decarboxylase [Escherichia coli STEC_7v]
gi|331036033|gb|EGI08270.1| uroporphyrinogen decarboxylase [Escherichia coli H736]
gi|331046622|gb|EGI18709.1| uroporphyrinogen decarboxylase [Escherichia coli M718]
gi|331061939|gb|EGI33863.1| uroporphyrinogen decarboxylase [Escherichia coli TA271]
gi|331072275|gb|EGI43609.1| uroporphyrinogen decarboxylase [Escherichia coli H591]
gi|331077049|gb|EGI48265.1| uroporphyrinogen decarboxylase [Escherichia coli H299]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|313501050|gb|ADR62416.1| HemE [Pseudomonas putida BIRD-1]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 189/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + + L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALPVPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAD-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRKEVARILASYGHGTGHVFNLGHGITPEVDPEHAGVFISAVHELS 349
>gi|66043681|ref|YP_233522.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
B728a]
gi|81308602|sp|Q4ZZD8|DCUP_PSEU2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|63254388|gb|AAY35484.1| Uroporphyrinogen decarboxylase HemE [Pseudomonas syringae pv.
syringae B728a]
gi|330971726|gb|EGH71792.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I+S + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVSGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|294142680|ref|YP_003558658.1| uroporphyrinogen decarboxylase [Shewanella violacea DSS12]
gi|293329149|dbj|BAJ03880.1| uroporphyrinogen decarboxylase [Shewanella violacea DSS12]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ IR + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLQQPVDRTPVWMMRQAGRYLPEYKAIRAQAGDFMSLCRDKDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGPR T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLYFETGEGPRFQRPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ A +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G IFNLGHGI VDP++ +K+V
Sbjct: 300 SPERIHQEVGQILASYGEGAGHIFNLGHGIHQHVDPEHAGAFIKSVHELS 349
>gi|152987059|ref|YP_001351090.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PA7]
gi|166234272|sp|A6VDF5|DCUP_PSEA7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150962217|gb|ABR84242.1| uroporphyrinogen decarboxylase [Pseudomonas aeruginosa PA7]
Length = 355
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N RA + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPRAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIRAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRQIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGKGTGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|332345987|gb|AEE59321.1| uroporphyrinogen decarboxylase HemE [Escherichia coli UMNK88]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ VK V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVKAVH 346
>gi|323974197|gb|EGB69329.1| uroporphyrinogen decarboxylase [Escherichia coli TW10509]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGCDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|253686625|ref|YP_003015815.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259645153|sp|C6DHS9|DCUP_PECCP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|251753203|gb|ACT11279.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT+ + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVNLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 120 ELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ R + +I+ ++R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLRYMHKIVDGLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ADPARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|218692278|ref|YP_002400490.1| uroporphyrinogen decarboxylase [Escherichia coli ED1a]
gi|254767695|sp|B7N2J9|DCUP_ECO81 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218429842|emb|CAR10668.1| uroporphyrinogen decarboxylase [Escherichia coli ED1a]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 187/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVNGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|293413433|ref|ZP_06656093.1| uroporphyrinogen decarboxylase [Escherichia coli B354]
gi|291468028|gb|EFF10527.1| uroporphyrinogen decarboxylase [Escherichia coli B354]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADIDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|290476987|ref|YP_003469898.1| uroporphyrinogen decarboxylase [Xenorhabdus bovienii SS-2004]
gi|289176331|emb|CBJ83136.1| uroporphyrinogen decarboxylase [Xenorhabdus bovienii SS-2004]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R++ +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRQEAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHSPILNHTDVEKLPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 -LGYVMDAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKSMMYAQPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ YL AQI AG + IFDT G L ++ ++ + + +I+ + R++
Sbjct: 180 LLLDKLANSVILYLNAQIKAGAQSVMIFDTWGGVLSHRDYREFSLQYMHKIVDGLIREHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMVA-TGCDALGLDWTTNIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G+G +FNLGHGI V P++ V+ V
Sbjct: 299 AAPARIEEEVSTILQDFGTGNGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|238765541|ref|ZP_04626455.1| Uroporphyrinogen decarboxylase [Yersinia kristensenii ATCC 33638]
gi|238696236|gb|EEP89039.1| Uroporphyrinogen decarboxylase [Yersinia kristensenii ATCC 33638]
Length = 365
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 185/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 11 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 70
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 71 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 129
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 130 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 190 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREND 249
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 250 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLY 308
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 309 APPARIEEEVSTILASFGQGDGHVFNLGHGIHQDVPPEHAGAFVKAVHALS 359
>gi|330951313|gb|EGH51573.1| uroporphyrinogen decarboxylase [Pseudomonas syringae Cit 7]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|170719579|ref|YP_001747267.1| uroporphyrinogen decarboxylase [Pseudomonas putida W619]
gi|229889846|sp|B1J2J9|DCUP_PSEPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169757582|gb|ACA70898.1| uroporphyrinogen decarboxylase [Pseudomonas putida W619]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 190/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + I L +
Sbjct: 65 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKKVISTPADIEALLIPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHDGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAE-AGADALGLDWTCEIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGITP+VDP++ + V
Sbjct: 304 IRNEVARILASYGKGTGHVFNLGHGITPEVDPEHAGVFINAVHELS 349
>gi|261819579|ref|YP_003257685.1| uroporphyrinogen decarboxylase [Pectobacterium wasabiae WPP163]
gi|261603592|gb|ACX86078.1| uroporphyrinogen decarboxylase [Pectobacterium wasabiae WPP163]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT+ + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 120 ELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ R + +I+ ++R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLRYMHKIVDGLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ADPARIEQEVASILAEFGQGDGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|24115281|ref|NP_709791.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 301]
gi|30064721|ref|NP_838892.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|110807847|ref|YP_691367.1| uroporphyrinogen decarboxylase [Shigella flexneri 5 str. 8401]
gi|45476893|sp|Q83PB7|DCUP_SHIFL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123146462|sp|Q0SY03|DCUP_SHIF8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|228311952|pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Shigella Flexineri: New Insights Into Its Catalytic
Mechanism
gi|24054575|gb|AAN45498.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 301]
gi|30042981|gb|AAP18703.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|110617395|gb|ABF06062.1| uroporphyrinogen decarboxylase [Shigella flexneri 5 str. 8401]
gi|313648647|gb|EFS13087.1| uroporphyrinogen decarboxylase [Shigella flexneri 2a str. 2457T]
gi|332751449|gb|EGJ81851.1| uroporphyrinogen decarboxylase [Shigella flexneri 4343-70]
gi|332762848|gb|EGJ93107.1| uroporphyrinogen decarboxylase [Shigella flexneri 2930-71]
gi|332765546|gb|EGJ95760.1| uroporphyrinogen decarboxylase [Shigella flexneri K-671]
gi|332998962|gb|EGK18552.1| uroporphyrinogen decarboxylase [Shigella flexneri K-218]
gi|333010730|gb|EGK30158.1| uroporphyrinogen decarboxylase [Shigella flexneri VA-6]
gi|333014359|gb|EGK33712.1| uroporphyrinogen decarboxylase [Shigella flexneri K-304]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R +L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|302189481|ref|ZP_07266154.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. syringae
642]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 LQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|127514350|ref|YP_001095547.1| uroporphyrinogen decarboxylase [Shewanella loihica PV-4]
gi|166234287|sp|A3QIJ0|DCUP_SHELP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126639645|gb|ABO25288.1| uroporphyrinogen decarboxylase [Shewanella loihica PV-4]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + + +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTLDAIKKLAVPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R
Sbjct: 181 LLDKLADAVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL G G +FNLGHGI VDP++ +K+V
Sbjct: 300 SPERIHEEVRQILAGYGEGSGHVFNLGHGIHQHVDPEHAGAFIKSVHELS 349
>gi|227355204|ref|ZP_03839613.1| uroporphyrinogen decarboxylase [Proteus mirabilis ATCC 29906]
gi|227164713|gb|EEI49567.1| uroporphyrinogen decarboxylase [Proteus mirabilis ATCC 29906]
Length = 361
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+T
Sbjct: 5 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGDFISLCKNTELACEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI + + P D +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKTPINSLDDIKKLPIPDPE-D 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R L ++ LIGF G+PWT+A+YMI GG K + + Y +A +
Sbjct: 124 ELGYVMNAVRAIRHALQGNVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYSEPQALH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG I IFDT G L +++ ++ + + +I+ + R+
Sbjct: 184 LLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLQYMHKIVDGLIRENE 243
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 244 GRKVPVTLFTKGGGRWLEAMAA-TGCDALGLDWTIDIEDARRRVGDKVALQGNMDPSMLY 302
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI V P + + V
Sbjct: 303 APPARIEQEVATILAGFGKGTGHVFNLGHGIHQDVPPAHAGAFIDAVH 350
>gi|218702632|ref|YP_002410261.1| uroporphyrinogen decarboxylase [Escherichia coli IAI39]
gi|300938778|ref|ZP_07153491.1| uroporphyrinogen decarboxylase [Escherichia coli MS 21-1]
gi|331675483|ref|ZP_08376232.1| uroporphyrinogen decarboxylase [Escherichia coli TA280]
gi|226723870|sp|B7NRT0|DCUP_ECO7I RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218372618|emb|CAR20493.1| uroporphyrinogen decarboxylase [Escherichia coli IAI39]
gi|300456288|gb|EFK19781.1| uroporphyrinogen decarboxylase [Escherichia coli MS 21-1]
gi|331067361|gb|EGI38767.1| uroporphyrinogen decarboxylase [Escherichia coli TA280]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|218551019|ref|YP_002384810.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ATCC 35469]
gi|226723874|sp|B7LUK5|DCUP_ESCF3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218358560|emb|CAQ91208.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ATCC 35469]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ G K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGSSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|170770128|ref|ZP_02904581.1| uroporphyrinogen decarboxylase [Escherichia albertii TW07627]
gi|170121010|gb|EDS89941.1| uroporphyrinogen decarboxylase [Escherichia albertii TW07627]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|117619073|ref|YP_855320.1| uroporphyrinogen decarboxylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560480|gb|ABK37428.1| uroporphyrinogen decarboxylase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 396
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 189/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 42 MKELKNDRYLRALLRQEVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 101
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F + EGPR + PIT+ P D +
Sbjct: 102 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPITSMADVQALPVPDPE-D 160
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 161 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 220
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R++
Sbjct: 221 LLLDKLADSVIAYLNAQIKAGAQAVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIREHD 280
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 281 GRRVPVTLFTKNGGQWLEQIAA-TGCDALGLDWTTDIADAKRRVGDKVALQGNMDPSMLY 339
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V+P++ V V
Sbjct: 340 ANPARIREEVASILAGFGHGNGHVFNLGHGIHQDVNPEHAGVFVNAVHELS 390
>gi|212637431|ref|YP_002313956.1| uroporphyrinogen decarboxylase [Shewanella piezotolerans WP3]
gi|226723877|sp|B8CTX5|DCUP_SHEPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|212558915|gb|ACJ31369.1| Uroporphyrinogen decarboxylase HemE [Shewanella piezotolerans WP3]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGNKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V+P++ + +V
Sbjct: 300 SPERIHQEVEQILSSYGEGTGHVFNLGHGIHQHVNPEHAGSFINSVHELS 349
>gi|50119196|ref|YP_048363.1| uroporphyrinogen decarboxylase [Pectobacterium atrosepticum
SCRI1043]
gi|81693466|sp|Q6DAL7|DCUP_ERWCT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49609722|emb|CAG73155.1| uroporphyrinogen decarboxylase [Pectobacterium atrosepticum
SCRI1043]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT+ + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 120 ELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ + +I+ +++R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDSLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ADPARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|218697705|ref|YP_002405372.1| uroporphyrinogen decarboxylase [Escherichia coli 55989]
gi|256021682|ref|ZP_05435547.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
gi|293474304|ref|ZP_06664713.1| uroporphyrinogen decarboxylase [Escherichia coli B088]
gi|300907551|ref|ZP_07125189.1| uroporphyrinogen decarboxylase [Escherichia coli MS 84-1]
gi|301302190|ref|ZP_07208322.1| uroporphyrinogen decarboxylase [Escherichia coli MS 124-1]
gi|332282925|ref|ZP_08395338.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
gi|254767694|sp|B7LA91|DCUP_ECO55 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218354437|emb|CAV01247.1| uroporphyrinogen decarboxylase [Escherichia coli 55989]
gi|291321334|gb|EFE60775.1| uroporphyrinogen decarboxylase [Escherichia coli B088]
gi|300400718|gb|EFJ84256.1| uroporphyrinogen decarboxylase [Escherichia coli MS 84-1]
gi|300842353|gb|EFK70113.1| uroporphyrinogen decarboxylase [Escherichia coli MS 124-1]
gi|315252735|gb|EFU32703.1| uroporphyrinogen decarboxylase [Escherichia coli MS 85-1]
gi|323182096|gb|EFZ67506.1| uroporphyrinogen decarboxylase [Escherichia coli 1357]
gi|324115429|gb|EGC09374.1| uroporphyrinogen decarboxylase [Escherichia coli E1167]
gi|332105277|gb|EGJ08623.1| uroporphyrinogen decarboxylase [Shigella sp. D9]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLVREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|226946536|ref|YP_002801609.1| uroporphyrinogen decarboxylase [Azotobacter vinelandii DJ]
gi|259645146|sp|C1DHQ1|DCUP_AZOVD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226721463|gb|ACO80634.1| uroporphyrinogen decarboxylase [Azotobacter vinelandii DJ]
Length = 355
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTVPDAMGLGLYFETGEGPRFRKVVSSPADIEALPVPDPERDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMAAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + RI+ + R++
Sbjct: 185 KLARAVTAYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMKRIVDGLIREHEGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLEAMAG-SGAEALGLDWTCDIGDARARVGGKVALQGNMDPSVLYANPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILARYGAGSGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|332998855|gb|EGK18450.1| uroporphyrinogen decarboxylase [Shigella flexneri K-272]
gi|333014315|gb|EGK33669.1| uroporphyrinogen decarboxylase [Shigella flexneri K-227]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R +L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPGRIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|325275686|ref|ZP_08141575.1| uroporphyrinogen decarboxylase [Pseudomonas sp. TJI-51]
gi|324099172|gb|EGB97129.1| uroporphyrinogen decarboxylase [Pseudomonas sp. TJI-51]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 188/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGPR + + + + L +
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRKVVSTPADIEALPVPDPQKDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R++L + LIGF G+PWT+A+YM+ GG KD + + AY N +A + LLD
Sbjct: 125 MDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMAYDNPQALHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 LAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 VILFTKNGGLWLESIAE-AGADALGLDWTCDIGDARRRVGDKVALQGNMDPTVLYAKPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP + + V
Sbjct: 304 IRQEVARILASYGHGNGHVFNLGHGITPEVDPAHAGVFINAVHELS 349
>gi|198242852|ref|YP_002218083.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226696379|sp|B5FQL2|DCUP_SALDC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197937368|gb|ACH74701.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|326625876|gb|EGE32221.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 182/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGPR T + + I
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 181 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 RCVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 PPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|323498399|ref|ZP_08103396.1| uroporphyrinogen decarboxylase [Vibrio sinaloensis DSM 21326]
gi|323316541|gb|EGA69555.1| uroporphyrinogen decarboxylase [Vibrio sinaloensis DSM 21326]
Length = 355
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I++ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|331649850|ref|ZP_08350928.1| uroporphyrinogen decarboxylase [Escherichia coli M605]
gi|330908312|gb|EGH36831.1| uroporphyrinogen 3 decarboxylase [Escherichia coli AA86]
gi|331041316|gb|EGI13468.1| uroporphyrinogen decarboxylase [Escherichia coli M605]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHADVFVEAVH 346
>gi|227328378|ref|ZP_03832402.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT+ + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFEAGEGPRFHSPITSHADVVNLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 120 ELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ + +I+ ++R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDGLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ADPARIEQEVASILAGFGEGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|330977138|gb|EGH77096.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 MQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|288942780|ref|YP_003445020.1| uroporphyrinogen decarboxylase [Allochromatium vinosum DSM 180]
gi|288898152|gb|ADC63988.1| uroporphyrinogen decarboxylase [Allochromatium vinosum DSM 180]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R K +F+D+C PE E+T
Sbjct: 1 MTQLQNDTFLRALLREPVDYTPVWMMRQAGRYLPEYRATRAKAGSFMDLCKNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL + DA+G + F E EGP + PI T P D
Sbjct: 61 LQPLDRYPLDAAILFSDILTVPDAMGLGLYFSEGEGPHFERPIRTAADVDQLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + + + +
Sbjct: 120 ELKYVMDAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGGSKNFSKIKAMMFDQPALLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++D YL AQ+ G IFDT G L + ++ + R++ + R+
Sbjct: 180 RLLEKVADSVTTYLNAQVARGAQATMIFDTWGGSLAPANYREFSLAYMQRVVEGLTREAE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLV 295
I F K G L + + T +A+G+DW+ L+ A L +QGN+DP L
Sbjct: 240 GRKVPVILFTKNGGQWLGDMAK-TGCDALGVDWTTDLADARRLVEDRVALQGNMDPCTLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L G G +FNLGHGITP VDP+ ++ V
Sbjct: 299 ASPERIREEVARVLASYGHGSGHVFNLGHGITPDVDPERPAAMISAVHELS 349
>gi|307128999|ref|YP_003881015.1| uroporphyrinogen decarboxylase [Dickeya dadantii 3937]
gi|306526528|gb|ADM96458.1| uroporphyrinogen decarboxylase [Dickeya dadantii 3937]
Length = 357
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRYN DAAILFSDIL + DA+G + F EGPR P+T P D
Sbjct: 61 LQPLRRYNLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + R +
Sbjct: 120 ELGYVMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPRTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGADYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G+G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEQEVATILAGFGAGNGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|330899284|gb|EGH30703.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T
Sbjct: 1 MTALKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ RY DAAILFSDIL I DA+G+ + F EGPR + + I
Sbjct: 61 MQPLDRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKTVSTLADIEALPIPDAQQD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A +
Sbjct: 121 LGYVMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI AG +QIFD+ G L ++ ++ + +I++ + R+
Sbjct: 181 LLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYMRKIVNGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++ +GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKVSLQGNMDPTVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 300 RPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVHELS 349
>gi|157373581|ref|YP_001472181.1| uroporphyrinogen decarboxylase [Shewanella sediminis HAW-EB3]
gi|189083023|sp|A8FQD0|DCUP_SHESH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157315955|gb|ABV35053.1| Uroporphyrinogen decarboxylase [Shewanella sediminis HAW-EB3]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR T + I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFQRPTDTIDSIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYEEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 300 SPERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPEHAGSFINSVHELS 349
>gi|254426915|ref|ZP_05040622.1| uroporphyrinogen decarboxylase [Alcanivorax sp. DG881]
gi|196193084|gb|EDX88043.1| uroporphyrinogen decarboxylase [Alcanivorax sp. DG881]
Length = 353
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 126/342 (36%), Positives = 185/342 (54%), Gaps = 5/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R+ +F+D+C + E+TLQP+
Sbjct: 7 QNDRFLRALNRESVDRTPIWMMRQAGRYLPEYRAAREHAGSFMDLCRNADLACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ + E + I L +
Sbjct: 67 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKVVRTEADVAALPIPDAETDLGYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + LLD
Sbjct: 127 MKAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHLKAMVYSQPEVAHALLDK 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL AQI G V+QIFDT G L ++ ++ + + +I+ + R +
Sbjct: 187 LAQSVTSYLNAQIRHGAQVVQIFDTWGGALSAEAYQQFSLKYMKQIVDGLIRDHEGRKVP 246
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ + +A+GLDW++ + A + + +QGN+DP L Q
Sbjct: 247 VILFTKNGGLWLESMAE-SGCDALGLDWTINIGEARRRVGGKVALQGNMDPAVLYASPQA 305
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V IL+ G P IFNLGHGITPQVDP++ ++ V
Sbjct: 306 IRAEVKRILNDFGDHPGHIFNLGHGITPQVDPEHARVFIEAV 347
>gi|284924089|emb|CBG37188.1| uroporphyrinogen decarboxylase [Escherichia coli 042]
Length = 354
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMYKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|271498810|ref|YP_003331835.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech586]
gi|270342365|gb|ACZ75130.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech586]
Length = 357
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRSQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRYN DAAILFSDIL + DA+G + F EGPR P+T P D L
Sbjct: 61 LQPLRRYNLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCHADVEKLPIPDPELE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + +
Sbjct: 121 -LGYVMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPHTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L + ++ + +I+ ++R++
Sbjct: 180 LLLDKLADSVTLYLNAQIRAGAQAVMIFDTWGGALSGPAYREFSLHYMHKIVDGLQREHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V AIL G+G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEQEVAAILAGFGTGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|409791|gb|AAC43095.1| uroporphyrinogen decarboxylase [Escherichia coli str. K-12 substr.
MG1655]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLXQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|254447592|ref|ZP_05061058.1| uroporphyrinogen decarboxylase [gamma proteobacterium HTCC5015]
gi|198262935|gb|EDY87214.1| uroporphyrinogen decarboxylase [gamma proteobacterium HTCC5015]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R K +F+D+C E E+T
Sbjct: 1 MSELKNDRFLRALAHQPVDRTPLWIMRQAGRYLPEYRATRAKAGSFMDLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ RY+ DAAILFSDIL + DA+G + FV EGP+ + E L +
Sbjct: 61 MQPLARYDLDAAILFSDILTVPDAMGLGLYFVTGEGPKFERTVRSEADLKQLATPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG +D + Y N +
Sbjct: 121 LGYVMNAVRTIRQELDGRVPLIGFAGSPWTIATYMVEGGSSRDFANIKGMMYGNPELLHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD ++ + YL AQI AG + +FDT G L ++ ++ + + +I++A+ ++
Sbjct: 181 LLDKITQSTIAYLKAQIAAGAQAVMVFDTWGGALSPENYQIFSLQYMKKIVAALPKEADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F K G L++ S +GLDW+ L+ A + + +QGNLDP L
Sbjct: 241 RAVPSILFTKNGGQWLESMAE-AGSTGLGLDWTTNLADAKRRVGDKVALQGNLDPSALYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ G+G +FNLGHGI +DP++V LV+ V
Sbjct: 300 PPAAIRTEVQKVLESFGTGSGHVFNLGHGIHQHIDPEHVSALVEAVHELS 349
>gi|77166455|ref|YP_344980.1| uroporphyrinogen decarboxylase HemE [Nitrosococcus oceani ATCC
19707]
gi|254435317|ref|ZP_05048824.1| uroporphyrinogen decarboxylase [Nitrosococcus oceani AFC27]
gi|123730594|sp|Q3J6U6|DCUP_NITOC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|76884769|gb|ABA59450.1| Uroporphyrinogen decarboxylase HemE [Nitrosococcus oceani ATCC
19707]
gi|207088428|gb|EDZ65700.1| uroporphyrinogen decarboxylase [Nitrosococcus oceani AFC27]
Length = 357
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 129/352 (36%), Positives = 199/352 (56%), Gaps = 8/352 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ PIW+MRQAGRYLPEYR++R K +FL +C TPE E+T
Sbjct: 1 MAELKNDRFLRALLRQPVDRTPIWIMRQAGRYLPEYREVRAKAGDFLTLCTTPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR++ DAAI+FSDIL I A+G + F + EGPR + P+ T+ D +
Sbjct: 61 LQPLRRFDLDAAIIFSDILTIPHAMGLGLYFSKGEGPRFERPVRTKNQVSALGVPDPE-S 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + +++ + R++L + LIGF G+PWT+A YM+ GG KD + +++ + +
Sbjct: 120 DLSYVMEALRLTRRELDGRVPLIGFSGSPWTLACYMVEGGSSKDFALIKGLMFEHPQVMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ YL AQI AG + +FDT G L ++ +++ + RI+ V R+
Sbjct: 180 HLLEILAQAVTVYLNAQIAAGAQAVMLFDTWGGALSHRDYRDFSLSYMARIVEGVVRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ T +A+G+DW+V L+ A ++ K+ +QGN+DP L
Sbjct: 240 GRQVPVILFTKGGGLWLETMAG-TGCDALGVDWTVDLAKARMQVGKQVALQGNMDPCVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ + + I+ G+G +FNLGHGI P V P+ V LV V +
Sbjct: 299 ASSERVRQEASEIIKAYGAGSGHVFNLGHGIHPTVMPEKVAALVDAVHELSV 350
>gi|325294205|ref|YP_004280069.1| uroporphyrinogen decarboxylase [Agrobacterium sp. H13-3]
gi|325062058|gb|ADY65749.1| uroporphyrinogen decarboxylase [Agrobacterium sp. H13-3]
Length = 390
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 205/343 (59%), Positives = 254/343 (74%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ERK +L+VL G + PPPIWLMRQAGRYLPEYR+ RK +FLD+CY PE E+TL
Sbjct: 47 MSERK--VLKVLNGQTVTPPPIWLMRQAGRYLPEYRETRKNAGSFLDLCYNPELATEVTL 104
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ DAAILFSDILVI D L RNV F E +GP MDPI I L + + +L
Sbjct: 105 QPIRRFGLDAAILFSDILVIPDGLDRNVSFSEGKGPAMDPIDVDGIDRL--DASNVIAHL 162
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR LP+ TL+GFCGAPWTVA+YMI+G D R+F Y+ A L
Sbjct: 163 SPVFETVSRLRHTLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFGYREPAAMEKL 222
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L++VSA+YL+AQI AG D +QIFD+ AG LGE EFE YA + V RII++VR + P+A
Sbjct: 223 LALLAEVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEEYAVKPVARIIASVRARRPSA 282
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAGY+LK+YRR T ++AIGLDWSVPL FA +LQKEGPVQGNLDPM +V G +
Sbjct: 283 KIIAFAKGAGYLLKDYRRKTGADAIGLDWSVPLGFARDLQKEGPVQGNLDPMLMVAGGKA 342
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ DG++A+L LG GP IFNLGHGITPQ DP+NV LV+ VR+
Sbjct: 343 LEDGIDAVLQALGQGPLIFNLGHGITPQADPENVARLVQRVRA 385
>gi|238752799|ref|ZP_04614267.1| Uroporphyrinogen decarboxylase [Yersinia rohdei ATCC 43380]
gi|238708997|gb|EEQ01247.1| Uroporphyrinogen decarboxylase [Yersinia rohdei ATCC 43380]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHSPITCRADVEKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ IL G G +FNLGHGI V P+N V V
Sbjct: 299 AAPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPENAGAFVDAVH 346
>gi|254509117|ref|ZP_05121218.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 16]
gi|219547955|gb|EED24979.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 16]
Length = 355
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LKYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|62182618|ref|YP_219035.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161617306|ref|YP_001591271.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167553829|ref|ZP_02347573.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994968|ref|ZP_02576058.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168467901|ref|ZP_02701738.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|224585707|ref|YP_002639506.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|75505417|sp|Q57H58|DCUP_SALCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083018|sp|A9N0K9|DCUP_SALPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767705|sp|C0Q2S9|DCUP_SALPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|62130251|gb|AAX67954.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161366670|gb|ABX70438.1| hypothetical protein SPAB_05157 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195629023|gb|EDX48415.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|205321826|gb|EDZ09665.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327252|gb|EDZ14016.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|224470235|gb|ACN48065.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|267996468|gb|ACY91353.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160663|emb|CBW20194.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915273|dbj|BAJ39247.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223367|gb|EFX48434.1| Uroporphyrinogen III decarboxylase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322717115|gb|EFZ08686.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323132503|gb|ADX19933.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332990986|gb|AEF09969.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 182/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGPR T + + I
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 181 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 PPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|260870708|ref|YP_003237110.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O111:H- str.
11128]
gi|257767064|dbj|BAI38559.1| uroporphyrinogen decarboxylase HemE [Escherichia coli O111:H- str.
11128]
gi|323177552|gb|EFZ63137.1| uroporphyrinogen decarboxylase [Escherichia coli 1180]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L ++LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVSLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|197247401|ref|YP_002149075.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|226696378|sp|B5F1I0|DCUP_SALA4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197211104|gb|ACH48501.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 354
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|325499271|gb|EGC97130.1| uroporphyrinogen decarboxylase [Escherichia fergusonii ECD227]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ +L AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLHLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|146309877|ref|YP_001174951.1| uroporphyrinogen decarboxylase [Enterobacter sp. 638]
gi|167012314|sp|A4W5C0|DCUP_ENT38 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145316753|gb|ABP58900.1| uroporphyrinogen decarboxylase [Enterobacter sp. 638]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADIDKLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +II + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIIDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDTVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 AQPARIEEEVASILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVHRHS 349
>gi|56415993|ref|YP_153068.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364920|ref|YP_002144557.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|204931282|ref|ZP_03222042.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|238913745|ref|ZP_04657582.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|81678034|sp|Q5PKA3|DCUP_SALPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058109|sp|B5BJR6|DCUP_SALPK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56130250|gb|AAV79756.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096397|emb|CAR62002.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|204319897|gb|EDZ05104.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|322616276|gb|EFY13186.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617281|gb|EFY14183.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625947|gb|EFY22762.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626655|gb|EFY23457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631490|gb|EFY28247.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635203|gb|EFY31921.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642592|gb|EFY39188.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646803|gb|EFY43307.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322650801|gb|EFY47194.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655899|gb|EFY52200.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657298|gb|EFY53577.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665560|gb|EFY61745.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669743|gb|EFY65888.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670978|gb|EFY67110.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679198|gb|EFY75251.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679356|gb|EFY75403.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322688123|gb|EFY84087.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193391|gb|EFZ78601.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323200689|gb|EFZ85762.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202178|gb|EFZ87234.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209289|gb|EFZ94224.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211614|gb|EFZ96451.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323218048|gb|EGA02761.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221337|gb|EGA05759.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225736|gb|EGA09957.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230976|gb|EGA15093.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235758|gb|EGA19840.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240072|gb|EGA24118.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242595|gb|EGA26617.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249697|gb|EGA33604.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252580|gb|EGA36421.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256926|gb|EGA40638.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262051|gb|EGA45615.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323263943|gb|EGA47457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268444|gb|EGA51914.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|238785560|ref|ZP_04629541.1| Uroporphyrinogen decarboxylase [Yersinia bercovieri ATCC 43970]
gi|238713545|gb|EEQ05576.1| Uroporphyrinogen decarboxylase [Yersinia bercovieri ATCC 43970]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 185/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I++ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVNGLTRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ L+ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDLADARRRVGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 299 APPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHALS 349
>gi|260774675|ref|ZP_05883580.1| uroporphyrinogen III decarboxylase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609394|gb|EEX35543.1| uroporphyrinogen III decarboxylase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 355
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGTPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LKYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|260774611|ref|ZP_05883523.1| uroporphyrinogen III decarboxylase [Vibrio metschnikovii CIP 69.14]
gi|260610405|gb|EEX35612.1| uroporphyrinogen III decarboxylase [Vibrio metschnikovii CIP 69.14]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR++ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFSLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPALLHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L++ EYL AQI AG + +FDT G L ++++++ + +I+ + R++
Sbjct: 181 LLDKLANSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYQSFSLHYMHKIVDGLIREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L++ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLESIAA-TGCDAIGLDWTINIADAKARVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + V +IL+ G+G +FNLGHGI V P+N V V
Sbjct: 300 SPQRIRQEVASILEGFGTGSGHVFNLGHGIHLDVPPENAGVFVDAVHELS 349
>gi|157147206|ref|YP_001454525.1| uroporphyrinogen decarboxylase [Citrobacter koseri ATCC BAA-895]
gi|166234245|sp|A8AKS6|DCUP_CITK8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157084411|gb|ABV14089.1| hypothetical protein CKO_02989 [Citrobacter koseri ATCC BAA-895]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAVH 346
>gi|16762290|ref|NP_457907.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143778|ref|NP_807120.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|168264577|ref|ZP_02686550.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|205354431|ref|YP_002228232.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207859345|ref|YP_002245996.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213051529|ref|ZP_03344407.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213428482|ref|ZP_03361232.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213647195|ref|ZP_03377248.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213854790|ref|ZP_03383030.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289826724|ref|ZP_06545689.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|23813998|sp|Q8Z329|DCUP_SALTI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696380|sp|B5QYF2|DCUP_SALEP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696381|sp|B5RFI7|DCUP_SALG2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|25291021|pir||AC0932 uroporphyrinogen decarboxylase [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504594|emb|CAD09477.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139413|gb|AAO70980.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|205274212|emb|CAR39230.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205346991|gb|EDZ33622.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206711148|emb|CAR35522.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326629563|gb|EGE35906.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|261254074|ref|ZP_05946647.1| uroporphyrinogen III decarboxylase [Vibrio orientalis CIP 102891]
gi|260937465|gb|EEX93454.1| uroporphyrinogen III decarboxylase [Vibrio orientalis CIP 102891]
Length = 355
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 300 SPERIREEVATILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|85711870|ref|ZP_01042925.1| Uroporphyrinogen-III decarboxylase [Idiomarina baltica OS145]
gi|85694267|gb|EAQ32210.1| Uroporphyrinogen-III decarboxylase [Idiomarina baltica OS145]
Length = 361
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 194/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L LQ ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+TLQP+
Sbjct: 12 KNDRYLRALQKQPVDRTPIWMMRQAGRYLPEYKATRAEAGDFMSLCKNTELACEVTLQPL 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAILFSDIL I DA+G + F + EGP+ P+ T+ D+ + L
Sbjct: 72 RRFDLDAAILFSDILTIPDAMGLGLYFEKGEGPKFSRPLRTEADVKGLTVPDMS-DELRY 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S++R++L + LIGF G+PWT+A+YM+ GG K+ + + + + +L+
Sbjct: 131 VTDAVSLIRQELDGKVPLIGFSGSPWTLATYMVEGGSTKNFSKVKQMLFAEPELMHHVLN 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D +YL AQI+AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 191 VLADSVIDYLNAQINAGAQAVMIFDTWGGVLSPRDYKQFSLAYMEKIVAGLIREQDGNHV 250
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F K G L+ + ++ +G+DW+ LS A + + +QGN+DP L Q
Sbjct: 251 PVTLFTKNGGQWLEAMAQ-AGADGLGVDWTTDLSDARARVGDQVALQGNMDPSVLYASPQ 309
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G G +FNLGHGI P+V+P + ++ V
Sbjct: 310 RIEEEVQLILESYGEGSGHVFNLGHGIHPEVNPDHAGAFIEAVHKHS 356
>gi|163803947|ref|ZP_02197777.1| uroporphyrinogen decarboxylase [Vibrio sp. AND4]
gi|159172248|gb|EDP57148.1| uroporphyrinogen decarboxylase [Vibrio sp. AND4]
Length = 355
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVAGILEGFGDTGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|92112251|ref|YP_572179.1| uroporphyrinogen decarboxylase [Chromohalobacter salexigens DSM
3043]
gi|122420968|sp|Q1R1C8|DCUP_CHRSD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91795341|gb|ABE57480.1| uroporphyrinogen decarboxylase [Chromohalobacter salexigens DSM
3043]
Length = 353
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 129/350 (36%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + ++L L ++ P+W+MRQAGRYLPEYR+ R + +F+D+C E E+T+
Sbjct: 1 MPLQNDRLLRALARQPVDRTPVWMMRQAGRYLPEYRETRGQAGSFMDLCRNAELACEVTM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNY 119
QP+RRY DAAILFSDIL I DA+ + F EGP+ + + E P D +
Sbjct: 61 QPLRRYALDAAILFSDILTIPDAMDLGLYFETGEGPKFRKTVRSAEAVDALPVPDAERD- 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R +L + + LIGF G+PWT+A+YMI GG KD + Y + A +
Sbjct: 120 LDYVMNAVRTIRHELADSVPLIGFSGSPWTLATYMIEGGSSKDFRHAKALMYGDPAAMHA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ +YL AQI AG ++QIFDT G L + ++ + RI+ + R++
Sbjct: 180 LLDKLARSVTDYLNAQIRAGAQIVQIFDTWGGVLSTPAYREFSLAYMARIVEGLIREHEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F K G L+ + ++A+GLDW+ LS A + +QGNLDP L
Sbjct: 240 RHVPVILFTKQGGQWLETIAD-SGADAVGLDWTTELSDARARVGDRVALQGNLDPNVLFA 298
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + D V IL GSGP +FNLGHG++ DP +V ++ +
Sbjct: 299 SPQAIRDEVARILASYGSGPGHVFNLGHGVSQFTDPDHVAAFIEALHELS 348
>gi|110835088|ref|YP_693947.1| uroporphyrinogen decarboxylase [Alcanivorax borkumensis SK2]
gi|122959310|sp|Q0VMC3|DCUP_ALCBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110648199|emb|CAL17675.1| uroporphyrinogen decarboxylase [Alcanivorax borkumensis SK2]
Length = 353
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 127/342 (37%), Positives = 183/342 (53%), Gaps = 5/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R+ +F+D+C + E+TLQP+
Sbjct: 7 QNDRFLRALNRETVDRTPIWMMRQAGRYLPEYRAAREHAGSFMDLCKNADLACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ + E + I + L +
Sbjct: 67 ERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKVVRTEADVAALPIPDAESDLGYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R L + LIGF G+PWT+A+YM+ GG KD + Y + +LD
Sbjct: 127 MNAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHLKAMVYSQPELAHAMLDK 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL AQI G +QIFDT G L ++ ++ R + +I+ + R
Sbjct: 187 LAQSVTGYLNAQIRHGAQAVQIFDTWGGALSAEAYKEFSLRYMQQIVDGLIRDNEGRKVP 246
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F K G L++ T +A+GLDW++ + A + + +QGN+DP L Q
Sbjct: 247 VILFTKNGGLWLESMAA-TGCDALGLDWTINIGDARRRVGDKVALQGNMDPAVLYASPQA 305
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+ V ILD G P IFNLGHGITPQVDP++ ++ V
Sbjct: 306 IRAEVKRILDDFGDHPGHIFNLGHGITPQVDPEHAKVFIEAV 347
>gi|238798675|ref|ZP_04642149.1| Uroporphyrinogen decarboxylase [Yersinia mollaretii ATCC 43969]
gi|238717493|gb|EEQ09335.1| Uroporphyrinogen decarboxylase [Yersinia mollaretii ATCC 43969]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 186/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + +I++ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLDFSLNYMHKIVNGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ L+ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDLADARRRVGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 299 APPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHTLS 349
>gi|15804588|ref|NP_290629.1| uroporphyrinogen decarboxylase [Escherichia coli O157:H7 EDL933]
gi|12518926|gb|AAG59194.1|AE005631_9 uroporphyrinogen decarboxylase [Escherichia coli O157:H7 str.
EDL933]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ A YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVALYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVXAVH 346
>gi|261249271|emb|CBG27133.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 182/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGPR T + + I
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 181 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGYKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 PPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|153835073|ref|ZP_01987740.1| uroporphyrinogen decarboxylase [Vibrio harveyi HY01]
gi|156972579|ref|YP_001443486.1| uroporphyrinogen decarboxylase [Vibrio harveyi ATCC BAA-1116]
gi|269959593|ref|ZP_06173974.1| uroporphyrinogen decarboxylase [Vibrio harveyi 1DA3]
gi|166234295|sp|A7N075|DCUP_VIBHB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148868469|gb|EDL67575.1| uroporphyrinogen decarboxylase [Vibrio harveyi HY01]
gi|156524173|gb|ABU69259.1| hypothetical protein VIBHAR_00219 [Vibrio harveyi ATCC BAA-1116]
gi|269835651|gb|EEZ89729.1| uroporphyrinogen decarboxylase [Vibrio harveyi 1DA3]
Length = 355
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|82546339|ref|YP_410286.1| uroporphyrinogen decarboxylase [Shigella boydii Sb227]
gi|123558087|sp|Q31U00|DCUP_SHIBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81247750|gb|ABB68458.1| uroporphyrinogen decarboxylase [Shigella boydii Sb227]
gi|320185963|gb|EFW60711.1| Uroporphyrinogen III decarboxylase [Shigella flexneri CDC 796-83]
gi|332092323|gb|EGI97398.1| uroporphyrinogen decarboxylase [Shigella boydii 3594-74]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|168245123|ref|ZP_02670055.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194450980|ref|YP_002048152.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|238058107|sp|B4TCT6|DCUP_SALHS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194409284|gb|ACF69503.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|205336123|gb|EDZ22887.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKGDVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|238794949|ref|ZP_04638546.1| Uroporphyrinogen decarboxylase [Yersinia intermedia ATCC 29909]
gi|238725707|gb|EEQ17264.1| Uroporphyrinogen decarboxylase [Yersinia intermedia ATCC 29909]
Length = 355
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRGVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P++ V V +
Sbjct: 299 APPARIEQEVSTILASFGQGQGHVFNLGHGIHQDVPPEHAGAFVDAVHTLS 349
>gi|269137538|ref|YP_003294238.1| uroporphyrinogen decarboxylase [Edwardsiella tarda EIB202]
gi|267983198|gb|ACY83027.1| uroporphyrinogen decarboxylase [Edwardsiella tarda EIB202]
gi|304557612|gb|ADM40276.1| Uroporphyrinogen III decarboxylase [Edwardsiella tarda FL6-60]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 180/352 (51%), Gaps = 8/352 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY R + NF+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYNATRAQAGNFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL + DA+G + F EGPR P+T P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTHPVTCHADIQRLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + Y + A +
Sbjct: 120 ELGYVMDAVRTIRRDLRGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSDPAALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L ++ ++ R + +I+ ++R+
Sbjct: 180 LLLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLQRESE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTCDIADARRRVGDRVALQGNMDPSLLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G G + NLGHGI P V P++ V V +
Sbjct: 299 APPARIEQEVATILAGFGQGEGHVCNLGHGIHPDVPPEHAGVFVDAVHRLSV 350
>gi|114773236|ref|ZP_01450471.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
gi|114546355|gb|EAU49264.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
Length = 355
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 187/352 (53%), Gaps = 9/352 (2%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+
Sbjct: 1 MTSPLKNDRYLRALAKESVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
TLQP+RR++ DAAILFSDIL I DA+G + F EGPR + PIT + PN D
Sbjct: 61 TLQPLRRFDLDAAILFSDILTIPDAMGLGLYFETGEGPRFERPITCAQDVKQLPNPDPE- 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + A+ +
Sbjct: 120 GELQYVMNAVRTIRKGLDGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMAFAEPQTL 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD ++D YL AQI AG + IFDT G L +++ ++ + + +I+ + R+
Sbjct: 180 HLLLDKVADSVITYLNAQIKAGAQSVMIFDTWGGVLSPRDYQLFSLQYMHKIVDGLIREN 239
Query: 238 PN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
F K G L+ T +A+GLDW++ ++ A + +QGN+DP L
Sbjct: 240 EGRKVPVTLFTKNGGMWLEAIAD-TGCDAVGLDWTIDIADAKARVGDRVALQGNMDPSML 298
Query: 295 VVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 299 YAPAPRIEEEVQSILAGFGEGSGHVFNLGHGIHLDVPPENAGVFVEAVHKYS 350
>gi|56461406|ref|YP_156687.1| uroporphyrinogen-III decarboxylase [Idiomarina loihiensis L2TR]
gi|81678281|sp|Q5QVW3|DCUP_IDILO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56180416|gb|AAV83138.1| Uroporphyrinogen-III decarboxylase [Idiomarina loihiensis L2TR]
Length = 358
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 195/347 (56%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C E E+T+QP+
Sbjct: 7 KNDRYLRALAKQPVDRTPVWMMRQAGRYLPEYKEVRGQAGDFMSLCRNTELACEVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAILFSDIL I DA+G + F EGP+ DP+ + D+ + L
Sbjct: 67 RRFDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKDPVRSMAAIKNLAVPDME-DELGY 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K+ + + + + A + LL+
Sbjct: 126 VMDAVRAIRRELNGSVPLIGFSGSPWTLATYMVEGGSTKNFSKVKQLMFADPEAMHTLLN 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L++ +YL AQI AG + IFDT G L +++ ++ + +I++ + R+
Sbjct: 186 VLAESVTQYLNAQIAAGAQSVMIFDTWGGVLSPRDYKAFSLAYMEKIVAGLTREADGRKV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F K G L+ + ++A+G+DW+ LS A + + +QGN+DP L
Sbjct: 246 PVTLFTKNGGQWLEAMAA-SGADALGVDWTTDLSDARARVGGQVALQGNMDPSVLYAKPA 304
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL GSG +FNLGHGI P+VDP++ ++ +
Sbjct: 305 RIEEEVQSILQSYGSGTGHVFNLGHGIHPEVDPEHAAAFIEAIHKYS 351
>gi|27364622|ref|NP_760150.1| uroporphyrinogen decarboxylase [Vibrio vulnificus CMCP6]
gi|37681334|ref|NP_935943.1| uroporphyrinogen decarboxylase [Vibrio vulnificus YJ016]
gi|320155016|ref|YP_004187395.1| uroporphyrinogen III decarboxylase [Vibrio vulnificus MO6-24/O]
gi|29611744|sp|Q8DD14|DCUP_VIBVU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|45476824|sp|Q7MGS7|DCUP_VIBVY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27360741|gb|AAO09677.1| uroporphyrinogen decarboxylase [Vibrio vulnificus CMCP6]
gi|37200085|dbj|BAC95914.1| uroporphyrinogen-III decarboxylase [Vibrio vulnificus YJ016]
gi|319930328|gb|ADV85192.1| uroporphyrinogen III decarboxylase [Vibrio vulnificus MO6-24/O]
Length = 355
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 186/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDCTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFSTGEGPIFDNPITCKADVEKIGVPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 300 SHDRIREEVASILEGFGHGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|120597368|ref|YP_961942.1| uroporphyrinogen decarboxylase [Shewanella sp. W3-18-1]
gi|146294492|ref|YP_001184916.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens CN-32]
gi|166234288|sp|A4YAY4|DCUP_SHEPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234290|sp|A1RFE3|DCUP_SHESW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120557461|gb|ABM23388.1| uroporphyrinogen decarboxylase [Shewanella sp. W3-18-1]
gi|145566182|gb|ABP77117.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens CN-32]
gi|319427856|gb|ADV55930.1| uroporphyrinogen decarboxylase [Shewanella putrefaciens 200]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGPR + T + +I +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVSQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|168239593|ref|ZP_02664651.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737614|ref|YP_002117068.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|238058110|sp|B4TQK7|DCUP_SALSV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194713116|gb|ACF92337.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197287730|gb|EDY27121.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 354
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 183/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGPR T + + I +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPAPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 181 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 PPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|242241109|ref|YP_002989290.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech703]
gi|242133166|gb|ACS87468.1| uroporphyrinogen decarboxylase [Dickeya dadantii Ech703]
Length = 360
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYRATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR P+T+ + P D L
Sbjct: 61 LQPLRRYHLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTSHADVVKLPIPDPELE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + +
Sbjct: 121 -LGYVMNAVRTIRRNLAGAVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFTAPETLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGALSGADYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTTDIADARRRVGDRVALQGNMDPSLLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G+G +FNLGHGI V P++ V+ V
Sbjct: 299 AQPARIEQEVASILAGYGAGAGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|82778827|ref|YP_405176.1| uroporphyrinogen decarboxylase [Shigella dysenteriae Sd197]
gi|309783953|ref|ZP_07678598.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1617]
gi|123561316|sp|Q32AH0|DCUP_SHIDS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81242975|gb|ABB63685.1| uroporphyrinogen decarboxylase [Shigella dysenteriae Sd197]
gi|308928324|gb|EFP73786.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1617]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V ++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPLEHAGVFVEAVH 346
>gi|91791832|ref|YP_561483.1| uroporphyrinogen decarboxylase [Shewanella denitrificans OS217]
gi|123061298|sp|Q12S16|DCUP_SHEDO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91713834|gb|ABE53760.1| uroporphyrinogen decarboxylase [Shewanella denitrificans OS217]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDATPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F E EGPR + T + I +
Sbjct: 61 LQPLRRYKLDAAILFSDILTVPDAMGLGLYFEEGEGPRFERPTDTVDAIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ + +V
Sbjct: 300 SPERIHQEVGQILSSYGKGTGHVFNLGHGIHQHVDPEHAGAFINSVHELS 349
>gi|323491910|ref|ZP_08097082.1| uroporphyrinogen decarboxylase [Vibrio brasiliensis LMG 20546]
gi|323313853|gb|EGA66945.1| uroporphyrinogen decarboxylase [Vibrio brasiliensis LMG 20546]
Length = 355
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V+ IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVSTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|168823119|ref|ZP_02835119.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205340574|gb|EDZ27338.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088597|emb|CBY98356.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|123440686|ref|YP_001004678.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166234296|sp|A1JIJ1|DCUP_YERE8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122087647|emb|CAL10429.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 355
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 185/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 299 APAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHALS 349
>gi|194445303|ref|YP_002043415.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197263727|ref|ZP_03163801.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|200388307|ref|ZP_03214919.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|238058108|sp|B4T0Z9|DCUP_SALNS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194403966|gb|ACF64188.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|197241982|gb|EDY24602.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|199605405|gb|EDZ03950.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|126172665|ref|YP_001048814.1| uroporphyrinogen decarboxylase [Shewanella baltica OS155]
gi|160877146|ref|YP_001556462.1| uroporphyrinogen decarboxylase [Shewanella baltica OS195]
gi|304410774|ref|ZP_07392391.1| uroporphyrinogen decarboxylase [Shewanella baltica OS183]
gi|307305055|ref|ZP_07584805.1| uroporphyrinogen decarboxylase [Shewanella baltica BA175]
gi|166234285|sp|A3CZN2|DCUP_SHEB5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083020|sp|A9L5A8|DCUP_SHEB9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|125995870|gb|ABN59945.1| uroporphyrinogen decarboxylase [Shewanella baltica OS155]
gi|160862668|gb|ABX51202.1| uroporphyrinogen decarboxylase [Shewanella baltica OS195]
gi|304350671|gb|EFM15072.1| uroporphyrinogen decarboxylase [Shewanella baltica OS183]
gi|306912457|gb|EFN42881.1| uroporphyrinogen decarboxylase [Shewanella baltica BA175]
gi|315269351|gb|ADT96204.1| uroporphyrinogen decarboxylase [Shewanella baltica OS678]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +II + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLRYMQKIIDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|227115021|ref|ZP_03828677.1| uroporphyrinogen decarboxylase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 354
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTDLKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT+ + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITSHADVVNLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 120 ELGYVMNAVRTIRKNLAGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMFAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ YL AQI AG + +FDT G L +++ ++ + +I+ ++R+
Sbjct: 180 LLLDKLANSVILYLNAQIRAGAQAVMVFDTWGGALSGRDYKEFSLHYMHKIVDGLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTSDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ADPARIEQEVASILAGFGQGNGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|254516140|ref|ZP_05128200.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR5-3]
gi|219675862|gb|EED32228.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR5-3]
Length = 355
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 135/346 (39%), Positives = 192/346 (55%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R++ +FLD+C E E+T
Sbjct: 1 MSELKNDRFLRALLRQPVDRTPLWMMRQAGRYLPEYRATREQAGSFLDLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL I DALG + F EGPR L N +
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDALGLGLYFETGEGPRFRKTVRSAEDLAGLNSFNAKDD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +RK+L I LIGF G+PWT+A+YM+ GG KD + + AY +
Sbjct: 121 LGYVMDAVSAIRKELNGSIPLIGFSGSPWTLATYMVEGGSSKDFSRVKAMAYDQPELMHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D A+YL AQ+ AG +QIFDT G L ++ ++ + + RI+S + ++
Sbjct: 181 LLTVLADAVADYLTAQVEAGAQALQIFDTWGGSLSAGAYKEFSLKYMQRIVSRLPKEADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L + A+G+DW+ +S A + + +QGN+DPM L
Sbjct: 241 RPVPVIVFTKGGGQWLSTIAD-CGAQAVGIDWTTDISTAKQVVGDRVALQGNMDPMMLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V IL G G +FNLGHGITP V+P +V V V
Sbjct: 300 SPERIREEVGNILAGFGHGSGHVFNLGHGITPGVNPDHVTAFVDAV 345
>gi|256823451|ref|YP_003147414.1| uroporphyrinogen decarboxylase [Kangiella koreensis DSM 16069]
gi|256796990|gb|ACV27646.1| uroporphyrinogen decarboxylase [Kangiella koreensis DSM 16069]
Length = 355
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 124/344 (36%), Positives = 190/344 (55%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ ++ PIW+MRQAGRYLPEYRQ+R + +F+D+C PE E+TLQP+
Sbjct: 6 KNDRYLKACLQQPVDRTPIWMMRQAGRYLPEYRQLRAEAGSFMDLCTNPELACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDIL I DA+G + F EGP P+ T+ P D L
Sbjct: 66 RRYPLDAAILFSDILTIPDAMGLGLYFTPGEGPAFHKPVRTKADVTALPIPDPN-QELKY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +R++L + LIGF G+PWT+A+YM+ GG K+ + + Y + + LLD
Sbjct: 125 VTDAVATIRRELKGDVPLIGFSGSPWTLATYMVEGGTTKNFSEVKGMMYSDPAVMHQLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D YL AQ+ +G + IFDT G L +++ ++ R + +I+ ++R +
Sbjct: 185 KLADSIILYLNAQVESGAQALMIFDTWGGVLSPRDYQEFSLRYMQKIVDGLKRDHEGHKI 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L + +T + +G+DW+ L+ A ++ + +QGN+DP L +
Sbjct: 245 PVTLFTKGGGAWL-DIMAVTGCDCLGVDWTTDLADARAKVAGKVALQGNMDPSILYAEDD 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI VDP + +V
Sbjct: 304 RIRDEVATILASYGKGSGHVFNLGHGIHQTVDPAKAGVFINSVH 347
>gi|77456643|ref|YP_346148.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf0-1]
gi|123606251|sp|Q3KJ97|DCUP_PSEPF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77380646|gb|ABA72159.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens Pf0-1]
Length = 355
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 190/347 (54%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAQAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LLD
Sbjct: 125 VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAMHLLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 KLAQSVTSYLNGQIQAGAQAVQIFDTWGGNLSAAAYQEFSLAYMKKIVSGLIREHDGRKV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F K G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 PVILFTKNGGLWLESIAE-AGADALGLDWTCDIGNARARVGDKVALQGNMDPTVLYAKPE 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+VDP++ ++ V
Sbjct: 304 AIRTEVGRILASYGKGSGHVFNLGHGITPEVDPEHAGAFLRAVHELS 350
>gi|238760266|ref|ZP_04621410.1| Uroporphyrinogen decarboxylase [Yersinia aldovae ATCC 35236]
gi|238701530|gb|EEP94103.1| Uroporphyrinogen decarboxylase [Yersinia aldovae ATCC 35236]
Length = 355
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 184/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I++ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLNYMHKIVNGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P++ VK V +
Sbjct: 299 APPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPEHAGAFVKAVHALS 349
>gi|152972859|ref|YP_001338005.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262043763|ref|ZP_06016866.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|166234252|sp|A6TGQ4|DCUP_KLEP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150957708|gb|ABR79738.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259038887|gb|EEW40055.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ ++ P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 299 ASAPRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPEHAGVFVEAVH 346
>gi|238892472|ref|YP_002917206.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae NTUH-K2044]
gi|330005092|ref|ZP_08305102.1| uroporphyrinogen decarboxylase [Klebsiella sp. MS 92-3]
gi|238544788|dbj|BAH61139.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328536425|gb|EGF62778.1| uroporphyrinogen decarboxylase [Klebsiella sp. MS 92-3]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ ++ P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVKSKADVDKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 299 APAPRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPEHAGVFVEAVH 346
>gi|332995416|gb|AEF05471.1| uroporphyrinogen decarboxylase [Alteromonas sp. SN2]
Length = 363
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 119/346 (34%), Positives = 184/346 (53%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+TLQP+
Sbjct: 14 KNDRYLRALSKQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DA+G + F EGPR T + + + L +
Sbjct: 74 RRFPLDAAILFSDILTIPDAMGLELYFETGEGPRFKKPITCKADVDKIGLPDPEGELQYV 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ + LL+
Sbjct: 134 MNAVRTIRRELNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMAFAEPAILHALLEK 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D EYL AQI AG + IFDT G L ++++++ + + RI+ + R+
Sbjct: 194 LADSVTEYLNAQIAAGAQSVMIFDTWGGVLSPRDYKDFSLQYMARIVDGLTREADGRKVP 253
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L +
Sbjct: 254 VTLFTKNGGMWLESIAA-TGCDAVGLDWTIDIAEARARIGDKVALQGNMDPSMLYASPER 312
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P+N V +V
Sbjct: 313 IREEVGTILSGYGEGSGHVFNLGHGIHLDVPPENAGVFVNSVHELS 358
>gi|237727867|ref|ZP_04558348.1| uroporphyrinogen decarboxylase [Citrobacter sp. 30_2]
gi|226910424|gb|EEH96342.1| uroporphyrinogen decarboxylase [Citrobacter sp. 30_2]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT++ P D +
Sbjct: 61 LQPLRRYKLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITSKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + + +
Sbjct: 120 GLGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPKVLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|153827143|ref|ZP_01979810.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-2]
gi|149738971|gb|EDM53287.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-2]
Length = 359
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|217974995|ref|YP_002359746.1| uroporphyrinogen decarboxylase [Shewanella baltica OS223]
gi|254767706|sp|B8E642|DCUP_SHEB2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|217500130|gb|ACK48323.1| uroporphyrinogen decarboxylase [Shewanella baltica OS223]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +II + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLRYMQKIIDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|260596100|ref|YP_003208671.1| uroporphyrinogen decarboxylase [Cronobacter turicensis z3032]
gi|260215277|emb|CBA27199.1| Uroporphyrinogen decarboxylase [Cronobacter turicensis z3032]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALQRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITGKADVEKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAIAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIEEEVASILAGFGHGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|119946828|ref|YP_944508.1| uroporphyrinogen decarboxylase [Psychromonas ingrahamii 37]
gi|166234276|sp|A1SZJ4|DCUP_PSYIN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119865432|gb|ABM04909.1| uroporphyrinogen decarboxylase [Psychromonas ingrahamii 37]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 193/351 (54%), Gaps = 6/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C + E+T
Sbjct: 1 MTELKNDRYLRALLKQDVDKTPVWMMRQAGRYLPEYKKVRAQAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR++ DAAILFSDIL I DA+G + F E EGP++ T + + N +
Sbjct: 61 LQPLRRFDLDAAILFSDILTIPDAMGLGLYFAEGEGPKLKRPITCKKDVDNLIMPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + A+ + +
Sbjct: 121 LQYVMNAVRTIRRELKGSVPLIGFAGSPWTLATYMVEGGSSKAFTKIKKMAFCEPQLLHT 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG + +FDT G L ++++++ + + +I++ ++R Y
Sbjct: 181 LLDKLADSVIDYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMTKIVAGLQRSYEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +AIGLDW++ ++ A + +QGN+DP L
Sbjct: 241 QKIPVTLFTKNGGQWLEAIAD-TGCDAIGLDWTIDMASAKARVGDRVVLQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V IL G G +FNLGHGI V P+N V V +
Sbjct: 300 TPERIRQEVATILASFGKGNGHVFNLGHGIHLDVPPENGKVFVDAVHELSM 350
>gi|24372030|ref|NP_716072.1| uroporphyrinogen decarboxylase [Shewanella oneidensis MR-1]
gi|29611763|sp|Q8EJM8|DCUP_SHEON RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|24345899|gb|AAN53517.1|AE015492_4 uroporphyrinogen decarboxylase [Shewanella oneidensis MR-1]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGPR + T + +I +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVGQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|168234411|ref|ZP_02659469.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194469767|ref|ZP_03075751.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194456131|gb|EDX44970.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205331648|gb|EDZ18412.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 354
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRESD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|51594649|ref|YP_068840.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
32953]
gi|153950025|ref|YP_001402800.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
31758]
gi|81691921|sp|Q66FP1|DCUP_YERPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167012319|sp|A7FNH2|DCUP_YERP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|51587931|emb|CAH19534.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
32953]
gi|152961520|gb|ABS48981.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis IP
31758]
Length = 355
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P + V V +
Sbjct: 299 APPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPAHAGAFVNAVHALS 349
>gi|258620698|ref|ZP_05715733.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM573]
gi|258586896|gb|EEW11610.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM573]
Length = 356
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 300 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|261209795|ref|ZP_05924098.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC341]
gi|260841151|gb|EEX67668.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC341]
Length = 356
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSDPAVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 300 PAPRIREEVASILAGFGQGDTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|318607527|emb|CBY29025.1| uroporphyrinogen III decarboxylase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|330863071|emb|CBX73202.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica W22703]
Length = 365
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 185/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 11 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 70
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 71 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 129
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 130 ELGYVINAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 189
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 190 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREND 249
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 250 GRRVPVTLFTKGGGQWLEAMA-TTGCDALGLDWTTDIADARRRVGDKVALQGNMDPSILY 308
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI V P++ V+ V +
Sbjct: 309 APAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVRAVHALS 359
>gi|238790626|ref|ZP_04634391.1| Uroporphyrinogen decarboxylase [Yersinia frederiksenii ATCC 33641]
gi|238721295|gb|EEQ12970.1| Uroporphyrinogen decarboxylase [Yersinia frederiksenii ATCC 33641]
Length = 354
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPKTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAESVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYAEFSLSYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEQEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAVH 346
>gi|283787330|ref|YP_003367195.1| uroporphyrinogen decarboxylase [Citrobacter rodentium ICC168]
gi|282950784|emb|CBG90460.1| uroporphyrinogen decarboxylase [Citrobacter rodentium ICC168]
Length = 354
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+ + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPVACRADVDKLPVPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPHTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILSAFGEGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|254230354|ref|ZP_04923739.1| uroporphyrinogen decarboxylase [Vibrio sp. Ex25]
gi|262392951|ref|YP_003284805.1| uroporphyrinogen III decarboxylase [Vibrio sp. Ex25]
gi|151937121|gb|EDN55994.1| uroporphyrinogen decarboxylase [Vibrio sp. Ex25]
gi|262336545|gb|ACY50340.1| uroporphyrinogen III decarboxylase [Vibrio sp. Ex25]
Length = 355
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVADILEGFGDTGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|153802853|ref|ZP_01957439.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-3]
gi|153830716|ref|ZP_01983383.1| uroporphyrinogen decarboxylase [Vibrio cholerae 623-39]
gi|254227008|ref|ZP_04920569.1| uroporphyrinogen decarboxylase [Vibrio cholerae V51]
gi|124121608|gb|EAY40351.1| uroporphyrinogen decarboxylase [Vibrio cholerae MZO-3]
gi|125620470|gb|EAZ48843.1| uroporphyrinogen decarboxylase [Vibrio cholerae V51]
gi|148873796|gb|EDL71931.1| uroporphyrinogen decarboxylase [Vibrio cholerae 623-39]
Length = 359
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|113968783|ref|YP_732576.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-4]
gi|114049077|ref|YP_739627.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-7]
gi|117918892|ref|YP_868084.1| uroporphyrinogen decarboxylase [Shewanella sp. ANA-3]
gi|122944166|sp|Q0HN48|DCUP_SHESM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123131013|sp|Q0HQN5|DCUP_SHESR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234289|sp|A0KSA9|DCUP_SHESA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|113883467|gb|ABI37519.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-4]
gi|113890519|gb|ABI44570.1| uroporphyrinogen decarboxylase [Shewanella sp. MR-7]
gi|117611224|gb|ABK46678.1| uroporphyrinogen decarboxylase [Shewanella sp. ANA-3]
Length = 354
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDMTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGPR + T + + +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLAVPDPEDD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGQVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHTAYREFSLRYMQKIVDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVAQILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|262172570|ref|ZP_06040248.1| uroporphyrinogen III decarboxylase [Vibrio mimicus MB-451]
gi|261893646|gb|EEY39632.1| uroporphyrinogen III decarboxylase [Vibrio mimicus MB-451]
Length = 360
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|194434759|ref|ZP_03067010.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1012]
gi|194416983|gb|EDX33101.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 1012]
gi|320179540|gb|EFW54491.1| Uroporphyrinogen III decarboxylase [Shigella boydii ATCC 9905]
gi|332085405|gb|EGI90575.1| uroporphyrinogen decarboxylase [Shigella dysenteriae 155-74]
Length = 354
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ALPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|328471089|gb|EGF41995.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus 10329]
Length = 355
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|262369493|ref|ZP_06062821.1| uroporphyrinogen decarboxylase [Acinetobacter johnsonii SH046]
gi|262315561|gb|EEY96600.1| uroporphyrinogen decarboxylase [Acinetobacter johnsonii SH046]
Length = 356
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 129/353 (36%), Positives = 190/353 (53%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R + +FL +C ++ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRATRAQAGDFLSLCKNNDFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDALGLGLYFEAGEGPKFHKAVRTEQDVANLPQFNAASD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LDYVMNAVKTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + + +I++ ++R+
Sbjct: 181 LLDRLADAVIDYLNAQIDAGAQAIQIFDSWGGALAHREYLEFSLKYMQKIVAGLQRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL+ A + + +QGNLDP L
Sbjct: 241 RKVPVILFTKGGGQWLEPMVA-TGADAFGLDWTTPLNVARQTVAGRAALQGNLDPATLYG 299
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ ++ A+LD +G ++ NLGHGIT VDP+N + TV
Sbjct: 300 SHETIVKATKAMLDDAYAGGEKTGYVANLGHGITQWVDPENPKAFIDTVHEYS 352
>gi|88705186|ref|ZP_01102897.1| Uroporphyrinogen decarboxylase (URO-D) [Congregibacter litoralis
KT71]
gi|88700276|gb|EAQ97384.1| Uroporphyrinogen decarboxylase (URO-D) [Congregibacter litoralis
KT71]
Length = 355
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 134/346 (38%), Positives = 191/346 (55%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R++ +FLD+C E E+T
Sbjct: 1 MSELKNDRFLRALMREPVDRTPLWMMRQAGRYLPEYRATREEAGSFLDLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL I DALG + F EGPR L N +
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDALGLGLYFETGEGPRFRKTVRSAEDLAGLNSFKASDD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +RK+L + LIGF G+PWT+A+YM+ GG KD + + AY +
Sbjct: 121 LGYVMDAVSAIRKELNGSVPLIGFSGSPWTLATYMVEGGSSKDFSRVKTMAYDQPELMHE 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D A+YL AQ+ AG +QIFDT G L ++ ++ + + RI+S + R+
Sbjct: 181 LLTVLADAVADYLTAQVEAGAQALQIFDTWGGSLSAGAYKEFSLKYMQRIVSRLPREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L + A+G+DW+ ++ A + + +QGN+DPM L
Sbjct: 241 RPVPVIVFTKGGGQWLSTIAD-CGAQAVGIDWTTDIATAKKLVGDRVAIQGNMDPMMLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL G G +FNLGHGITP V+P +V V V
Sbjct: 300 SPDRIREEVAGILAGFGHGSGHVFNLGHGITPGVNPDHVTAFVDAV 345
>gi|153002426|ref|YP_001368107.1| uroporphyrinogen decarboxylase [Shewanella baltica OS185]
gi|166234286|sp|A6WTA5|DCUP_SHEB8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151367044|gb|ABS10044.1| uroporphyrinogen decarboxylase [Shewanella baltica OS185]
Length = 354
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 124/350 (35%), Positives = 188/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKEPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNHELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + +I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLSIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMKAVSTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKTFEKIKKMAYAEPMALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L + ++ + +II + R
Sbjct: 181 LLDKLADSVILYLNAQVANGAQSLMIFDSWGGALSHSAYREFSLHYMQKIIDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAMAE-TGCDALGLDWTVDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI VDP++ +K V ++
Sbjct: 300 PIPRIEEEVGHILAGYGEGTGHVFNLGHGIHQHVDPEHAGAFIKAVHAQS 349
>gi|332159922|ref|YP_004296499.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664152|gb|ADZ40796.1| uroporphyrinogen decarboxylase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 185/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVINAVRTIRRELAGAVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYAEFSLNYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMA-TTGCDALGLDWTTDIADARRRVGDKVALQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI V P++ V+ V +
Sbjct: 299 APAARIEEEVSTILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVRAVHALS 349
>gi|260770584|ref|ZP_05879516.1| uroporphyrinogen III decarboxylase [Vibrio furnissii CIP 102972]
gi|260614414|gb|EEX39601.1| uroporphyrinogen III decarboxylase [Vibrio furnissii CIP 102972]
gi|315178360|gb|ADT85274.1| uroporphyrinogen decarboxylase [Vibrio furnissii NCTC 11218]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 185/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R++
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + ++ +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGEKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +ILD G G +FNLGHGI V P+N V V
Sbjct: 300 PEARIREEVASILDGFGHGGTGHVFNLGHGIHLDVPPENAGVFVNAVHELS 350
>gi|28899690|ref|NP_799295.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus RIMD
2210633]
gi|153838926|ref|ZP_01991593.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ3810]
gi|260878158|ref|ZP_05890513.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AN-5034]
gi|260897879|ref|ZP_05906375.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus Peru-466]
gi|260902144|ref|ZP_05910539.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ4037]
gi|31340033|sp|Q87KR0|DCUP_VIBPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28807942|dbj|BAC61179.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus RIMD
2210633]
gi|149747634|gb|EDM58558.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ3810]
gi|308085522|gb|EFO35217.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus Peru-466]
gi|308090229|gb|EFO39924.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AN-5034]
gi|308110167|gb|EFO47707.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus AQ4037]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIDYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|90581308|ref|ZP_01237105.1| uroporphyrinogen decarboxylase [Vibrio angustum S14]
gi|90437547|gb|EAS62741.1| uroporphyrinogen decarboxylase [Vibrio angustum S14]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP++R+ DAAILFSDIL I DA+G + F EGP+ T + + +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRHDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVTEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T + +GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 300 QPERIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|255747133|ref|ZP_05421076.1| uroporphyrinogen III decarboxylase [Vibrio cholera CIRS 101]
gi|262149009|ref|ZP_06028154.1| uroporphyrinogen III decarboxylase [Vibrio cholerae INDRE 91/1]
gi|262166941|ref|ZP_06034661.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC27]
gi|23814028|sp|Q9KV26|DCUP_VIBCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172047749|sp|A5F3N0|DCUP_VIBC3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|255735182|gb|EET90584.1| uroporphyrinogen III decarboxylase [Vibrio cholera CIRS 101]
gi|262024646|gb|EEY43327.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC27]
gi|262031199|gb|EEY49818.1| uroporphyrinogen III decarboxylase [Vibrio cholerae INDRE 91/1]
Length = 355
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 300 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|238918147|ref|YP_002931661.1| uroporphyrinogen decarboxylase, [Edwardsiella ictaluri 93-146]
gi|259645148|sp|C5BHE8|DCUP_EDWI9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238867715|gb|ACR67426.1| uroporphyrinogen decarboxylase, putative [Edwardsiella ictaluri
93-146]
Length = 354
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 178/351 (50%), Gaps = 6/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY R + NF+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYNATRAQAGNFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL + DA+G + F EGPR T + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFETGEGPRFTHSVTCHADIQRLPIPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + + + A +
Sbjct: 121 LGYVMDAVRTIRRSLRGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKVMFSDPAALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L ++ ++ R + +I+ ++R+
Sbjct: 181 LLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLQRESEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAD-TGCDALGLDWTCDIADARRRVGGRVALQGNMDPSLLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G G I NLGHGI P V PK+ V V +
Sbjct: 300 PPARIEQEVETILAGFGQGEGHICNLGHGIHPDVPPKHAGVFVDAVHRLSV 350
>gi|262401575|ref|ZP_06078142.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC586]
gi|262352290|gb|EEZ01419.1| uroporphyrinogen III decarboxylase [Vibrio sp. RC586]
Length = 360
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLNKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V V
Sbjct: 304 PAPRIREEVASILAGFGQGETGHVFNLGHGIHLDVPPENAGVFVDAVHELS 354
>gi|258624484|ref|ZP_05719430.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM603]
gi|258583233|gb|EEW08036.1| uroporphyrinogen decarboxylase [Vibrio mimicus VM603]
Length = 356
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N ++ V
Sbjct: 300 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFIEAVHELS 350
>gi|15640359|ref|NP_229986.1| uroporphyrinogen decarboxylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591006|ref|ZP_01678324.1| uroporphyrinogen decarboxylase [Vibrio cholerae 2740-80]
gi|147675642|ref|YP_001218600.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|153819680|ref|ZP_01972347.1| uroporphyrinogen decarboxylase [Vibrio cholerae NCTC 8457]
gi|153823152|ref|ZP_01975819.1| uroporphyrinogen decarboxylase [Vibrio cholerae B33]
gi|227080544|ref|YP_002809095.1| uroporphyrinogen decarboxylase [Vibrio cholerae M66-2]
gi|229506873|ref|ZP_04396381.1| uroporphyrinogen III decarboxylase [Vibrio cholerae BX 330286]
gi|229508678|ref|ZP_04398172.1| uroporphyrinogen III decarboxylase [Vibrio cholerae B33]
gi|229516060|ref|ZP_04405511.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC9]
gi|229606387|ref|YP_002877035.1| uroporphyrinogen decarboxylase [Vibrio cholerae MJ-1236]
gi|254851641|ref|ZP_05240991.1| uroporphyrinogen decarboxylase [Vibrio cholerae MO10]
gi|298501294|ref|ZP_07011091.1| uroporphyrinogen decarboxylase [Vibrio cholerae MAK 757]
gi|9654747|gb|AAF93505.1| uroporphyrinogen decarboxylase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121547147|gb|EAX57277.1| uroporphyrinogen decarboxylase [Vibrio cholerae 2740-80]
gi|126509768|gb|EAZ72362.1| uroporphyrinogen decarboxylase [Vibrio cholerae NCTC 8457]
gi|126519339|gb|EAZ76562.1| uroporphyrinogen decarboxylase [Vibrio cholerae B33]
gi|146317525|gb|ABQ22064.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|227008432|gb|ACP04644.1| uroporphyrinogen decarboxylase [Vibrio cholerae M66-2]
gi|227012188|gb|ACP08398.1| uroporphyrinogen decarboxylase [Vibrio cholerae O395]
gi|229346963|gb|EEO11930.1| uroporphyrinogen III decarboxylase [Vibrio cholerae RC9]
gi|229354313|gb|EEO19242.1| uroporphyrinogen III decarboxylase [Vibrio cholerae B33]
gi|229355978|gb|EEO20897.1| uroporphyrinogen III decarboxylase [Vibrio cholerae BX 330286]
gi|229369042|gb|ACQ59465.1| uroporphyrinogen III decarboxylase [Vibrio cholerae MJ-1236]
gi|254847346|gb|EET25760.1| uroporphyrinogen decarboxylase [Vibrio cholerae MO10]
gi|297539985|gb|EFH76049.1| uroporphyrinogen decarboxylase [Vibrio cholerae MAK 757]
Length = 359
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|304311966|ref|YP_003811564.1| Uroporphyrinogen decarboxylase [gamma proteobacterium HdN1]
gi|301797699|emb|CBL45921.1| Uroporphyrinogen decarboxylase [gamma proteobacterium HdN1]
Length = 351
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 187/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L LQ ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MSELKNDRFLRALQRQPVDMTPVWMMRQAGRYLPEYRATRARAGDFMALCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL I DA+G + F EGP+ P+ TQ P ++ +
Sbjct: 61 LQPLDRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFHKPVRTQAQVEALPIPNVAAD 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R L + LIGF G+PWT+A+YM+ GG +D + + +
Sbjct: 121 -LDYVMAAVRTIRSALGGRVPLIGFSGSPWTLATYMVEGGSSRDFATIKRMMFTQPEVLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL QI +G +QIFDT G L ++ ++ + +I++ + R++
Sbjct: 180 QLLDKLATTVIAYLNEQIRSGAQAVQIFDTWGGVLNTPCYQAFSLDYMQKIVAGLIREHE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F K G L+ T +A+GLDW++ + A + +QGN+DP L
Sbjct: 240 GREVPCILFTKNGGQWLERIAD-TGCSAVGLDWTLDIGVARSRVGNRVAIQGNMDPSILY 298
Query: 296 VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ILD G +FNLGHGITP+VDP+N ++ V
Sbjct: 299 GTHNAIRAEVKRILDDFGPHNGHVFNLGHGITPEVDPENARVFIEAVHELS 349
>gi|262163607|ref|ZP_06031350.1| uroporphyrinogen III decarboxylase [Vibrio mimicus VM223]
gi|262027974|gb|EEY46636.1| uroporphyrinogen III decarboxylase [Vibrio mimicus VM223]
Length = 356
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDRPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVITYLNAQIKAGAQAVMVFDTWGGVLTPRDYQLFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKHGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 300 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|227823859|ref|YP_002827832.1| uroporphyrinogen decarboxylase [Sinorhizobium fredii NGR234]
gi|254767702|sp|C3MB70|DCUP_RHISN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|227342861|gb|ACP27079.1| uroporphyrinogen decarboxylase [Sinorhizobium fredii NGR234]
Length = 344
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 216/345 (62%), Positives = 265/345 (76%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++K+LEVL G + PPPIWLMRQAGRYLPEYR R K +FLD+CYTP+ VE+TL
Sbjct: 1 MAETRRKVLEVLNGKSLTPPPIWLMRQAGRYLPEYRATRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DAL RNVRF E GPRMDPI T I L D L++L
Sbjct: 61 QPIRRYAFDAAILFSDILVIPDALHRNVRFEEGHGPRMDPIDTDGIAGLK--ADGILSHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F++++ LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 SPVFETVARLRRELPEETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFEEL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L FL+DVSA+YL+AQI AG D +QIFD+ AG LGE EF +A V R+I++VR + P+A
Sbjct: 179 LAFLADVSADYLVAQIDAGADAVQIFDSWAGVLGEDEFARFAVEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LK+YRRLT ++AIGLDW+VPL+FA ELQK+GPVQGNLDPMR+V G
Sbjct: 239 KIIAFAKGAGLLLKDYRRLTGADAIGLDWAVPLAFAAELQKDGPVQGNLDPMRVVAGGGA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
M G++ ILDVLG+GP IFNLGHGITP+ DP+NV LV VR K
Sbjct: 299 MESGIDRILDVLGNGPLIFNLGHGITPEADPENVSALVARVRGTK 343
>gi|262375968|ref|ZP_06069199.1| uroporphyrinogen decarboxylase [Acinetobacter lwoffii SH145]
gi|262309062|gb|EEY90194.1| uroporphyrinogen decarboxylase [Acinetobacter lwoffii SH145]
Length = 356
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 187/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDATPVWMMRQAGRYLPEYRETRAKAGDFLSLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDALGLGLYFEAGEGPKFHKTIRTEQDVANLPAFNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LDYVMNAVSTIRSALSGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG +QIFD+ G L E+ ++ + +I++ ++R+
Sbjct: 181 LLDRLADAVTEYLNAQIDAGAQAVQIFDSWGGALAHREYIEFSLNYMQKIVAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL+ A + + +QGNLDP L
Sbjct: 241 RKIPVILFTKGGGQWLEPMI-TTGADAFGLDWTTPLNVARQTVAGRAALQGNLDPATLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +I A+LD +I NLGHGIT VDP N + TV
Sbjct: 300 SSDTIIKATKAMLDDAYANGEKTGYIANLGHGITQWVDPANPKAFIDTVHEYS 352
>gi|295095115|emb|CBK84205.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 354
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADVDKLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A +
Sbjct: 120 ELGYVMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPLALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 AQPARIEEEVSTILSGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|110644332|ref|YP_672062.1| uroporphyrinogen decarboxylase [Escherichia coli 536]
gi|191174306|ref|ZP_03035814.1| uroporphyrinogen decarboxylase [Escherichia coli F11]
gi|300985444|ref|ZP_07177447.1| uroporphyrinogen decarboxylase [Escherichia coli MS 200-1]
gi|123147437|sp|Q0TA68|DCUP_ECOL5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110345924|gb|ABG72161.1| uroporphyrinogen decarboxylase [Escherichia coli 536]
gi|190905438|gb|EDV65069.1| uroporphyrinogen decarboxylase [Escherichia coli F11]
gi|300306536|gb|EFJ61056.1| uroporphyrinogen decarboxylase [Escherichia coli MS 200-1]
gi|324015270|gb|EGB84489.1| uroporphyrinogen decarboxylase [Escherichia coli MS 60-1]
Length = 354
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVLPEHAGVFVEAVH 346
>gi|153216336|ref|ZP_01950414.1| uroporphyrinogen decarboxylase [Vibrio cholerae 1587]
gi|124114331|gb|EAY33151.1| uroporphyrinogen decarboxylase [Vibrio cholerae 1587]
Length = 359
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAVGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|22124411|ref|NP_667834.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM 10]
gi|45442851|ref|NP_994390.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Microtus
str. 91001]
gi|108809598|ref|YP_653514.1| uroporphyrinogen decarboxylase [Yersinia pestis Antiqua]
gi|108810397|ref|YP_646164.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|145600979|ref|YP_001165055.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides F]
gi|153997232|ref|ZP_02022339.1| uroporphyrinogen decarboxylase [Yersinia pestis CA88-4125]
gi|162421492|ref|YP_001605064.1| uroporphyrinogen decarboxylase [Yersinia pestis Angola]
gi|165928321|ref|ZP_02224153.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938227|ref|ZP_02226786.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166012062|ref|ZP_02232960.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214417|ref|ZP_02240452.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402412|ref|ZP_02307872.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422930|ref|ZP_02314683.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426822|ref|ZP_02318575.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470604|ref|ZP_02335308.1| uroporphyrinogen decarboxylase [Yersinia pestis FV-1]
gi|170022609|ref|YP_001719114.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis YPIII]
gi|186893651|ref|YP_001870763.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis PB1/+]
gi|218930739|ref|YP_002348614.1| uroporphyrinogen decarboxylase [Yersinia pestis CO92]
gi|229837482|ref|ZP_04457644.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides A]
gi|229839417|ref|ZP_04459576.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229899979|ref|ZP_04515119.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229900572|ref|ZP_04515698.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|294505404|ref|YP_003569466.1| uroporphyrinogen decarboxylase [Yersinia pestis Z176003]
gi|23813999|sp|Q8ZAQ7|DCUP_YERPE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123372029|sp|Q1C1V3|DCUP_YERPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123373533|sp|Q1CN66|DCUP_YERPN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166198369|sp|A4TS20|DCUP_YERPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058174|sp|B2K124|DCUP_YERPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058175|sp|A9R8D5|DCUP_YERPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058179|sp|B1JJL0|DCUP_YERPY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21957194|gb|AAM84085.1|AE013650_10 uroporphyrinogen decarboxylase [Yersinia pestis KIM 10]
gi|45437717|gb|AAS63267.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Microtus
str. 91001]
gi|108774045|gb|ABG16564.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|108781511|gb|ABG15569.1| uroporphyrinogen decarboxylase [Yersinia pestis Antiqua]
gi|115349350|emb|CAL22321.1| uroporphyrinogen decarboxylase [Yersinia pestis CO92]
gi|145212675|gb|ABP42082.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides F]
gi|149289340|gb|EDM39419.1| uroporphyrinogen decarboxylase [Yersinia pestis CA88-4125]
gi|162354307|gb|ABX88255.1| uroporphyrinogen decarboxylase [Yersinia pestis Angola]
gi|165913888|gb|EDR32506.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165919660|gb|EDR36993.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989057|gb|EDR41358.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204421|gb|EDR48901.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166957141|gb|EDR55162.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048192|gb|EDR59600.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054204|gb|EDR64029.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169749143|gb|ACA66661.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis YPIII]
gi|186696677|gb|ACC87306.1| uroporphyrinogen decarboxylase [Yersinia pseudotuberculosis PB1/+]
gi|229682392|gb|EEO78482.1| uroporphyrinogen decarboxylase [Yersinia pestis Nepal516]
gi|229686964|gb|EEO79040.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229695783|gb|EEO85830.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704170|gb|EEO91181.1| uroporphyrinogen decarboxylase [Yersinia pestis Pestoides A]
gi|262363470|gb|ACY60191.1| uroporphyrinogen decarboxylase [Yersinia pestis D106004]
gi|294355863|gb|ADE66204.1| uroporphyrinogen decarboxylase [Yersinia pestis Z176003]
gi|320013665|gb|ADV97236.1| uroporphyrinogen decarboxylase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 355
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGPWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI V P + V V +
Sbjct: 299 APPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPAHAGAFVNAVHALS 349
>gi|320539741|ref|ZP_08039404.1| uroporphyrinogen decarboxylase [Serratia symbiotica str. Tucson]
gi|320030206|gb|EFW12222.1| uroporphyrinogen decarboxylase [Serratia symbiotica str. Tucson]
Length = 354
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 183/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLCQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR I ++ P D +
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSTIASRADVDKLPLFDPEVE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ + ++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 -LGYVMNAVRTISRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAS-TGCDALGLDWATDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P N V+ V ++
Sbjct: 299 ATPERIGQEVETILAGFGHGEGHVFNLGHGIHQDVPPANAGAFVEAVHAQS 349
>gi|332083886|gb|EGI89099.1| uroporphyrinogen decarboxylase [Shigella boydii 5216-82]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIVDARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ALPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|297582238|ref|ZP_06944154.1| uroporphyrinogen decarboxylase [Vibrio cholerae RC385]
gi|297533539|gb|EFH72384.1| uroporphyrinogen decarboxylase [Vibrio cholerae RC385]
Length = 359
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFVALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|145297830|ref|YP_001140671.1| uroporphyrinogen decarboxylase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166234230|sp|A4SJ51|DCUP_AERS4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|142850602|gb|ABO88923.1| uroporphyrinogen decarboxylase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 355
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 187/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MKELKNDRYLRALLRQDVDMTPVWMMRQAGRYLPEYKATRAVAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F + EGPR + PI + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEQGEGPRFERPIKSMADVQALPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ +++ + + +I+ + R+
Sbjct: 180 LLLDKLADSVIGYLNAQIKAGAQSVMVFDTWGGVLTPRDYRDFSLQYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKNGGQWLEQIAA-TGCDALGLDWTIDIADAKRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGI VDP++ V V
Sbjct: 299 AAPARIREEVATILAGFGSGNGHVFNLGHGIHQDVDPEHAGVFVNAVHELS 349
>gi|254787472|ref|YP_003074901.1| uroporphyrinogen decarboxylase [Teredinibacter turnerae T7901]
gi|259645158|sp|C5BRJ3|DCUP_TERTT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|237686429|gb|ACR13693.1| uroporphyrinogen decarboxylase [Teredinibacter turnerae T7901]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 190/351 (54%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L LQG ++ P+W+MRQAGRYLPEYR R + +F+ +C P+ E+T
Sbjct: 1 MTELKNDRFLRALQGQPVDVTPVWMMRQAGRYLPEYRATRARAGDFMGLCTNPQLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP++RY DAAILFSDIL + DA+G + F EGP+ +P+ T P ++ N
Sbjct: 61 LQPLQRYPLDAAILFSDILTVPDAMGLGLYFETGEGPKFRNPVRTAAQVEALPVVNAE-N 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R +L + LIGF G+PWT+ +YM+ GG KD +++ Y
Sbjct: 120 ELTYVLDAVKTIRHELNGAVPLIGFSGSPWTLMTYMVEGGSSKDFRRSKAMLYSEPEVAR 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L +YL AQI AG +QIFD+ G L + ++ + + +I++ + R++
Sbjct: 180 LLLDKLVASVTDYLNAQIRAGAQAVQIFDSWGGALAHDAYLEFSLKPMQQIVNGLIREHQ 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I F KG G L+ T A+GLDW+ + A E + + +QGN+DP L
Sbjct: 240 GRQVPVILFTKGGGQWLEAMAE-TGVTALGLDWTTDIGNARERVGGKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V IL G G +FNLGHGITP+VDP + + V
Sbjct: 299 ASTSAIRDEVGRILASYGHGSGHVFNLGHGITPEVDPVHAGAFINAVHELS 349
>gi|149189249|ref|ZP_01867536.1| uroporphyrinogen decarboxylase [Vibrio shilonii AK1]
gi|148837003|gb|EDL53953.1| uroporphyrinogen decarboxylase [Vibrio shilonii AK1]
Length = 355
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRETRAVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLHFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 300 QPERIREEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|121728881|ref|ZP_01681890.1| uroporphyrinogen decarboxylase [Vibrio cholerae V52]
gi|121628849|gb|EAX61309.1| uroporphyrinogen decarboxylase [Vibrio cholerae V52]
Length = 359
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPIFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|261340909|ref|ZP_05968767.1| uroporphyrinogen decarboxylase [Enterobacter cancerogenus ATCC
35316]
gi|288316964|gb|EFC55902.1| uroporphyrinogen decarboxylase [Enterobacter cancerogenus ATCC
35316]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI ++ P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSPIKSKADVDKLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPMALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEALAA-TGCDALGLDWTTDIGEARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 AQPARIEEEVSTILSAFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|156935800|ref|YP_001439716.1| uroporphyrinogen decarboxylase [Cronobacter sakazakii ATCC BAA-894]
gi|166234248|sp|A7MJ78|DCUP_ENTS8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|156534054|gb|ABU78880.1| hypothetical protein ESA_03676 [Cronobacter sakazakii ATCC BAA-894]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L LQ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALQRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPITGKADVEKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y S+ +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAESQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAIAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G+G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIEEEVASILAGFGNGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|229512391|ref|ZP_04401866.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TMA 21]
gi|229350606|gb|EEO15551.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TMA 21]
Length = 359
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A ++ + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVRDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|213028213|ref|ZP_03342660.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAA SDIL I DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAATFSSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|329296843|ref|ZP_08254179.1| uroporphyrinogen decarboxylase [Plautia stali symbiont]
Length = 355
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 121/348 (34%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I D +G + F EGPR PI + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDTMGLGLYFETGEGPRFSHPIACRADVDKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELNYVMNAVRTIRHNLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L++ YL AQI AG + +FDT G L ++ ++ + +I+ +V +
Sbjct: 180 ALLDKLAESVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLYYMHKIVDSVLHENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPITLFTKGGGQWLEEMAA-TGCDALGLDWTTDIGEARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G+G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEQEVAGILEGFGAGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|268593002|ref|ZP_06127223.1| uroporphyrinogen decarboxylase [Providencia rettgeri DSM 1131]
gi|291311475|gb|EFE51928.1| uroporphyrinogen decarboxylase [Providencia rettgeri DSM 1131]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFIALCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR PI + P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFHKPIMSAADVKNIPIPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L ++ LIGF G+PWT+A+YM+ GG K + + Y++ +
Sbjct: 121 -LGYVMDAVRAIRKALEGNVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L + ++ ++ + +II + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSVMIFDTWGGVLTKRDYLQFSLNYMHKIIDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEEMAA-TGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVQNILSGFGQGEGHVFNLGHGIHQDVPPEHAGAFVDAVH 346
>gi|161505345|ref|YP_001572457.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189083017|sp|A9MHD2|DCUP_SALAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160866692|gb|ABX23315.1| hypothetical protein SARI_03490 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+ + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMELGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L ++++++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQHFSLYYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILSGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|114561669|ref|YP_749182.1| uroporphyrinogen decarboxylase [Shewanella frigidimarina NCIMB 400]
gi|122300875|sp|Q088H1|DCUP_SHEFN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114332962|gb|ABI70344.1| uroporphyrinogen decarboxylase [Shewanella frigidimarina NCIMB 400]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 125/350 (35%), Positives = 191/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+++R + +F+ +C E E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKEVRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDAIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY A +
Sbjct: 121 LGYVMRAVSTIRRELNGSVPLIGFSGSPWTLATYMVEGGSSKTFEKIKRMAYAEPAALHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ GV + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVVLYLNAQVANGVQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRFADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP++ + +V
Sbjct: 300 TPERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPEHAGAFINSVHELS 349
>gi|307826270|ref|ZP_07656478.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
gi|307732675|gb|EFO03544.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
Length = 355
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 193/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L ++ PIW+MRQAGRYLPEYR++R++ +FLD+C PE E+TLQP+
Sbjct: 5 KNDTFIRALLKQPVDYTPIWMMRQAGRYLPEYRKVREQAGSFLDLCTNPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++FDAAILFSDIL I DA+G + F E EGP+ +P+ T P D + L
Sbjct: 65 RRFDFDAAILFSDILTIPDAMGLGLYFTEGEGPKFSNPVRTAADVNKLPIPDPETD-LRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++RK L + LIGF G+PWT+A+YM+ GG K + + Y+ + + +LD
Sbjct: 124 VVDAVRLIRKNLQGSVPLIGFSGSPWTLATYMVEGGSSKSFQKVKSMMYEQPKLMHVMLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ A YL AQI AG + +FDT G L ++ ++ ++ + ++
Sbjct: 184 KLAQSVAAYLNAQIEAGAQAVMLFDTWGGMLTTEDYVEFSLYYAKQVRALLKTTVDGQQI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ + +A+GLDW + A + + +QGN+DP+ L +
Sbjct: 244 PTILFTKGGGLWLEAMAD-SGYDALGLDWQTDMQQARARVGHQVALQGNMDPVALYASPE 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + V IL GSG +FNLGHGI P ++P +V +V V
Sbjct: 303 VITEKVKTILHKYGSGSGHVFNLGHGILPDMNPDHVKAMVDAVHEHS 349
>gi|296100628|ref|YP_003610774.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055087|gb|ADF59825.1| uroporphyrinogen decarboxylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 182/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR I ++ P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFTSTIKSKADVDKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPLALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 AQPARIEEEVASILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|330501508|ref|YP_004378377.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina NK-01]
gi|328915794|gb|AEB56625.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina NK-01]
Length = 355
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSSLADIEALPVPDPEKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELGGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQALHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSITAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLAYMKKIVDGLVREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ T + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESLAD-TGAEALGLDWTCDIGSARARVGAKVALQGNMDPAVLYAKPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGAGSGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|206578510|ref|YP_002241062.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae 342]
gi|288937707|ref|YP_003441766.1| uroporphyrinogen decarboxylase [Klebsiella variicola At-22]
gi|290513215|ref|ZP_06552576.1| uroporphyrinogen decarboxylase [Klebsiella sp. 1_1_55]
gi|226697476|sp|B5XYE1|DCUP_KLEP3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|206567568|gb|ACI09344.1| uroporphyrinogen decarboxylase [Klebsiella pneumoniae 342]
gi|288892416|gb|ADC60734.1| uroporphyrinogen decarboxylase [Klebsiella variicola At-22]
gi|289774312|gb|EFD82319.1| uroporphyrinogen decarboxylase [Klebsiella sp. 1_1_55]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIKSKADVDKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYAEPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLEKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI VDP++ V+ V
Sbjct: 299 APAPRIEEEVATILAGFGQGEGHVFNLGHGIHQDVDPQHAGVFVEAVH 346
>gi|269965864|ref|ZP_06179958.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 40B]
gi|269829528|gb|EEZ83768.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 40B]
Length = 355
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V+ V
Sbjct: 300 SPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|119475134|ref|ZP_01615487.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2143]
gi|119451337|gb|EAW32570.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2143]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 189/349 (54%), Gaps = 5/349 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + L L ++ P+W+MRQAGRYLPEYR R K +F+ + PE+ E+T+
Sbjct: 1 MTLKNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLMMNPEFACEVTM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ RY DAAILFSDIL I DA+G + F EGPR + I L
Sbjct: 61 QPLDRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRKTIRTAADVEALAIPDPHKDL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S + K+L + LIGF G+PWT+A+YM+ GG KDH + A+ + + L
Sbjct: 121 GYVMDAVSTIHKELNGRVPLIGFSGSPWTLATYMVEGGSSKDHRIVKALAFNEPQTMHGL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
LD L+ YL QI AG + +QIFDT G L + ++ + +I+ + R++
Sbjct: 181 LDKLAQSVTSYLNGQIMAGAEAVQIFDTWGGALSHAAYREFSLSYMQKIVDGLIREHNGQ 240
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
I F K G L+ T + AIGLDW+ +S A + +QGN+DP L
Sbjct: 241 VIPVILFTKNGGQWLQAIAD-TGATAIGLDWTTDISSARRQVGDRVALQGNMDPTMLYAS 299
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + + V++IL+ G+G +FNLGHGITP+V+P+N +++V
Sbjct: 300 PQRIREEVSSILEGYGNGSGHVFNLGHGITPEVNPENARVFIESVHELS 348
>gi|91228705|ref|ZP_01262618.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 12G01]
gi|91187731|gb|EAS74050.1| uroporphyrinogen decarboxylase [Vibrio alginolyticus 12G01]
Length = 355
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V IL+ G +FNLGHGI V P+N V V
Sbjct: 300 SPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|270159350|ref|ZP_06188006.1| uroporphyrinogen decarboxylase [Legionella longbeachae D-4968]
gi|289165830|ref|YP_003455968.1| Uroporphyrinogen decarboxylase [Legionella longbeachae NSW150]
gi|269987689|gb|EEZ93944.1| uroporphyrinogen decarboxylase [Legionella longbeachae D-4968]
gi|288859003|emb|CBJ12931.1| Uroporphyrinogen decarboxylase [Legionella longbeachae NSW150]
Length = 351
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 137/349 (39%), Positives = 204/349 (58%), Gaps = 7/349 (2%)
Query: 1 MNERKQKI-LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + Q + L L+ + P+W+MRQAGRYLPEYRQ R + +FL +C PE E+T
Sbjct: 1 MYDLNQSLFLRALRRLPVERTPVWMMRQAGRYLPEYRQTRAQAGDFLSLCKNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAAILFSDIL I DA+G + F E EGP + PI QEI + L+
Sbjct: 61 LQPLRRYSLDAAILFSDILTIPDAMGLGLYFAEGEGPCFERPI--QEIQAITNLQVPDLD 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ ++RK++P + LIGF G+PWT+A YM+ G +D + Y NS A +
Sbjct: 119 SLAYVMNAVRLIRKEMPKELPLIGFAGSPWTLACYMVEGRSSRDFKRILHLIYTNSEAAH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ A+YL QI+AGV+ + +FDT G L ++N++ + +I+ ++ P
Sbjct: 179 LLLNKLALSVADYLCEQINAGVNAVMLFDTWGGILTPENYQNFSLHYMQQIVQQIKNHAP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I F KG G L+ +T +A+G+DW+ LS A + + +QGNLDP L+
Sbjct: 239 DVPVILFTKGGGQWLEKML-VTGCDALGIDWTCDLSDARRRVGDKVALQGNLDPSVLLTS 297
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + + V +L G G +FNLGHGITP V P++V +++ V
Sbjct: 298 KQCIHEQVKKVLASFGHGSGHVFNLGHGITPDVPPEHVAAMIEAVHEYS 346
>gi|229519871|ref|ZP_04409304.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TM 11079-80]
gi|229343112|gb|EEO08097.1| uroporphyrinogen III decarboxylase [Vibrio cholerae TM 11079-80]
Length = 359
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 184/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AGV + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGVQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLMRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 LRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|229587975|ref|YP_002870094.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens SBW25]
gi|259645154|sp|C3KBH3|DCUP_PSEFS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229359841|emb|CAY46693.1| uroporphyrinogen decarboxylase [Pseudomonas fluorescens SBW25]
Length = 355
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 190/347 (54%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRANAGDFMSLCMNPEFACEVTMQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LLD
Sbjct: 125 VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAMHLLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 KLAQSVTSYLNGQIMAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ ++A+GLDW+ + A + + +QGN+DP L +
Sbjct: 245 PVILFTKGGGLWLESIAD-AGADALGLDWTCDIGEARRRVGGQVALQGNMDPTVLYAKPE 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+V+P++ ++ V
Sbjct: 304 AIRTEVGRILASYGKGTGHVFNLGHGITPEVNPEHAGAFLRAVHELS 350
>gi|332288959|ref|YP_004419811.1| uroporphyrinogen decarboxylase [Gallibacterium anatis UMN179]
gi|330431855|gb|AEC16914.1| uroporphyrinogen decarboxylase [Gallibacterium anatis UMN179]
Length = 355
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 181/350 (51%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY++ R + +F+ +C E E+T
Sbjct: 1 MTQLKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKETRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ + + I
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFAKPIQCQADIAQLPIPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGYVMNAVRTIRRELNGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPALLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHQQYREFSLRYMEKIVKGLIRESEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +AIGLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RTVPVTLFTKGGGLWLEAIAD-TGCDAIGLDWTVDIAQAKARVGDKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V +
Sbjct: 300 PAERIEQEVETILAGYGKGYGHVFNLGHGIHQDVPVESPKVFVDAIHRYS 349
>gi|330444945|ref|ZP_08308599.1| uroporphyrinogen decarboxylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493063|dbj|GAA03096.1| uroporphyrinogen decarboxylase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 355
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 117/351 (33%), Positives = 180/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDHTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP++R+ DAAILFSDIL I DA+G + F EGP+ + + +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPIKCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRHDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T + +GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL+ G +FNLGHGI V P+N V V
Sbjct: 300 QPERIRQEVASILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|254292048|ref|ZP_04962825.1| uroporphyrinogen decarboxylase [Vibrio cholerae AM-19226]
gi|150422034|gb|EDN14004.1| uroporphyrinogen decarboxylase [Vibrio cholerae AM-19226]
Length = 359
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRTQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPTVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|229526894|ref|ZP_04416297.1| uroporphyrinogen III decarboxylase [Vibrio cholerae bv. albensis
VL426]
gi|229336063|gb|EEO01082.1| uroporphyrinogen III decarboxylase [Vibrio cholerae bv. albensis
VL426]
Length = 360
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + T + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPITCKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ + K L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQISKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|229527007|ref|ZP_04416403.1| uroporphyrinogen III decarboxylase [Vibrio cholerae 12129(1)]
gi|229335530|gb|EEO01011.1| uroporphyrinogen III decarboxylase [Vibrio cholerae 12129(1)]
Length = 359
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR R + +F+ +C E E+T
Sbjct: 5 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP + + + I
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFERPIICKADVDKIGIPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHA 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +++ ++ + + +I+ + R+
Sbjct: 185 LLDKLADSVISYLNAQIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 245 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V P+N V+ V
Sbjct: 304 PAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 354
>gi|312958548|ref|ZP_07773068.1| Uroporphyrinogen decarboxylase [Pseudomonas fluorescens WH6]
gi|311287091|gb|EFQ65652.1| Uroporphyrinogen decarboxylase [Pseudomonas fluorescens WH6]
Length = 355
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 190/347 (54%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C PE+ E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAHAGDFMSLCMNPEFACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVVSTLADIEALPIPDPHKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LLD
Sbjct: 125 VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAMHLLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 KLAQSVTAYLNGQIMAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ ++A+GLDW+ L A + + +QGN+DP L +
Sbjct: 245 PVILFTKGGGLWLESIAD-AGADALGLDWTCDLGEARRRVGNQVALQGNMDPTVLYAKPE 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGITP+V+P++ ++ V
Sbjct: 304 AIRAEVGRILASYGKGTGHVFNLGHGITPEVNPEHAGAFLRAVHELS 350
>gi|253987882|ref|YP_003039238.1| uroporphyrinogen decarboxylase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779332|emb|CAQ82493.1| uroporphyrinogen decarboxylase [Photorhabdus asymbiotica]
Length = 358
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 127/348 (36%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 5 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAEAGDFISLCKNTELACEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ P D +
Sbjct: 65 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKSPILSRADVEKLPIPDPEME 124
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ ++RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 -LSYVLDAVRVIRKTLAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAVMH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ R + +I+ + R+
Sbjct: 184 QLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYREFSLRYMHQIVDGLIRENE 243
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 244 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 302
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 303 ASPERIEQEVLTILQGFGVGSGHVFNLGHGIHQDVLPEHAGVFVEAVH 350
>gi|283836736|ref|ZP_06356477.1| uroporphyrinogen decarboxylase [Citrobacter youngae ATCC 29220]
gi|291067287|gb|EFE05396.1| uroporphyrinogen decarboxylase [Citrobacter youngae ATCC 29220]
Length = 354
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PI ++ P D +
Sbjct: 61 LQPLRRYKLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTSPIASKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 GLGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPKALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAQSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|16767421|ref|NP_463036.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|18203230|sp|Q9L9I4|DCUP_SALTY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|6960341|gb|AAF33501.1| 97% identity over 353 amino acids with E. coli uroporphyrinogen
decarboxylase (heme) (SW:P29680); contains simlarity to
Pfam domain PF01208 (URO-D), Score=819, E=1.6e-242, N=1
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16422725|gb|AAL22995.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
Length = 354
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 182/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MR+AGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRRAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGPR T + + I
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVEKLPIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 121 LGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 181 LLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 PPARIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|303251936|ref|ZP_07338107.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247095|ref|ZP_07529147.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649366|gb|EFL79551.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306856344|gb|EFM88495.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 354
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|239993391|ref|ZP_04713915.1| uroporphyrinogen decarboxylase [Alteromonas macleodii ATCC 27126]
Length = 363
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 182/346 (52%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+TLQP+
Sbjct: 14 KNDRYLRALLKQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DA+G + F EGPR T + + + L +
Sbjct: 74 RRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFKNPITCKADVDKIGLPDPEGELQYV 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YMI GG K + + A+ + LL
Sbjct: 134 MNAVRTIRRELKGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMAFAEPATLHALLAK 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D EYL AQI AG + +FDT G L +++ ++ + + RI+S + R+
Sbjct: 194 LADSVTEYLNAQIAAGAQSVMVFDTWGGVLSPRDYKEFSLQYMERIVSGLTRENEGRKVP 253
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
F K G L++ T +A+GLDW++ + A + + +QGN+DP L Q
Sbjct: 254 VTLFTKNGGMWLESIAA-TGCDAVGLDWTIDIKEARARIGDKVALQGNMDPSMLYAQPQR 312
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL+ G G +FNLGHGI V P+N V V
Sbjct: 313 IEQEVASILEGYGEGSGHVFNLGHGIHLDVPPENAGVFVNAVHELS 358
>gi|89093495|ref|ZP_01166443.1| Uroporphyrinogen decarboxylase HemE [Oceanospirillum sp. MED92]
gi|89082185|gb|EAR61409.1| Uroporphyrinogen decarboxylase HemE [Oceanospirillum sp. MED92]
Length = 354
Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 180/350 (51%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C E E+T
Sbjct: 1 MAELKNDRFLRALLREPVDATPVWMMRQAGRYLPEYRETRAQAGDFLSLCKNKELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ RY+ DAAILFSDIL I DA+G + F EGP+ + E + +
Sbjct: 61 IQPLERYDLDAAILFSDILTIPDAMGLGLYFETGEGPKFKKVIRTERDVAELPVPDAAAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LDYVMNAVKEIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKQMMYATPEIMHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI +G +QIFDT G L ++ ++ + + +I+ + R+Y
Sbjct: 181 LLDKLAQSVTTYLNEQIRSGAQAVQIFDTWGGALSGPCYQEFSLKYMKQIVDGLIREYDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F K G L++ S+A+GLDW+ + A + + +QGN+DP L
Sbjct: 241 RKVPVILFTKNGGQWLESMAE-AGSDALGLDWTTDIGNARARVGDKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G GP +FNLGHGI VDP V V
Sbjct: 300 PASRIEQEVEFILGQFGQGPGHVFNLGHGIHQFVDPAAPKAFVDAVHELS 349
>gi|254482773|ref|ZP_05096011.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2148]
gi|214037132|gb|EEB77801.1| uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2148]
Length = 356
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 134/350 (38%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L LQ ++ PIW+MRQAGRYLPEYR R++ +FLD+C E E+T
Sbjct: 1 MTELKNDRFLRALQRQPVDQTPIWMMRQAGRYLPEYRATRQQAGSFLDLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL + DALG + F E EGPR E L N +
Sbjct: 61 MQPLRRYPMDAAILFSDILTVPDALGLGLYFEEGEGPRFHKTVRSEADLAGLNSIKADDD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R +L + LIGF G+PWT+A+YM+ GG KD Q + AY +
Sbjct: 121 LGYVMNAVRTIRAELNGLVPLIGFTGSPWTLATYMVEGGSSKDFAQVKAMAYDKPELMHN 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D A+YL AQI AG +QIFDT G L ++ ++ + + +II+ ++
Sbjct: 181 LLSLLADAVADYLAAQIRAGAQAVQIFDTWGGSLSAAAYQEFSLKYMQQIIARLQADPET 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L + +G+DW+ + A ++ +QGN+DP L
Sbjct: 241 RAVPVIVFTKGGGQWLNAIAD-CGAQGVGIDWTTEIGAARAQIGNRVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGITP V+P +V V VR
Sbjct: 300 SPARIREEVASILAGYGHGSGHVFNLGHGITPGVNPDHVTAFVDAVRELS 349
>gi|37524498|ref|NP_927842.1| uroporphyrinogen decarboxylase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|45476834|sp|Q7N960|DCUP_PHOLL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|36783922|emb|CAE12784.1| uroporphyrinogen decarboxylase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN + + L L ++ P+W+MRQAGRYLPEY+ R K +F+ +C E E+T
Sbjct: 1 MNALKNDRYLRALLRQSVDVTPVWMMRQAGRYLPEYQATRAKAGDFIALCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP++RY DAAILFSDIL I DA+G + F EGPR P+ ++ P D +
Sbjct: 61 LQPLQRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKSPVFSRADVEKLPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 -LSYVTDAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPTVMH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYREFSLHYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
FAKG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFAKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G+G +FNLGHGI + P++ V+ V
Sbjct: 299 ASPERIEQEVSTILQGFGTGSGHVFNLGHGIHQDILPEHAGVFVEAVH 346
>gi|212709046|ref|ZP_03317174.1| hypothetical protein PROVALCAL_00078 [Providencia alcalifaciens DSM
30120]
gi|212688335|gb|EEB47863.1| hypothetical protein PROVALCAL_00078 [Providencia alcalifaciens DSM
30120]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR P+ + P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFKKPVASAADVKNIPVPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ +
Sbjct: 121 -LGYVMDAVRAIRKALKGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPNTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQ+ AG + IFDT G L + ++ ++ R + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQVRAGAQSLMIFDTWGGVLTKRDYLEFSLRYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEEMAA-TGCDALGLDWTTEIADARRRVGDQVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI V+P++ V V
Sbjct: 299 APPARIEQEVQHILAGFGQGEGHVFNLGHGIHQDVEPEHAGAFVDAVH 346
>gi|261344364|ref|ZP_05972008.1| uroporphyrinogen decarboxylase [Providencia rustigianii DSM 4541]
gi|282567635|gb|EFB73170.1| uroporphyrinogen decarboxylase [Providencia rustigianii DSM 4541]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 183/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFIALCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + PI P D +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFEKPIKNAADVKNIPIPDPEME 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y++ +
Sbjct: 121 -LGYVMDAVRAIRKALNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYEDPTTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L + ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIRAGAQSLMIFDTWGGVLTKRDYLQFSLHYMHKIVDGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEEMAA-TGCDALGLDWTTEIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVQHILKGFGQGEGHVFNLGHGIHQDVQPEHAGTFVDAVHRFS 349
>gi|15890080|ref|NP_355761.1| uroporphyrinogen decarboxylase [Agrobacterium tumefaciens str. C58]
gi|23813934|sp|Q8UBL6|DCUP_AGRT5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|15158065|gb|AAK88546.1| uroporphyrinogen decarboxylase [Agrobacterium tumefaciens str. C58]
Length = 344
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 208/343 (60%), Positives = 255/343 (74%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ERK ++ VL G + PPPIWLMRQAGRYLPEYR+ RK +FLD+CY PE E+TL
Sbjct: 1 MSERK--VMTVLNGKTVTPPPIWLMRQAGRYLPEYRETRKSAGSFLDLCYNPELASEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ DAAILFSDILVI DAL RNV F E +GP MDPI I L + + +L
Sbjct: 59 QPIRRFGLDAAILFSDILVIPDALHRNVSFSEGKGPAMDPIDISGIEKL--DASDVMAHL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR LP+ TL+GFCGAPWTVA+YMI+G D R+F YQ A L
Sbjct: 117 SPVFETVSRLRTSLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFGYQEPAAMEKL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L++VSA+YL+AQI AG D +QIFD+ AG LGE EFE YA + V RII++VR + P+A
Sbjct: 177 LALLAEVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEEYAIKPVARIIASVRARRPSA 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAGY+L++YRR T +NAIGLDWSVPLSFA +LQKEGPVQGNLDPM +V G +
Sbjct: 237 KIIAFAKGAGYLLRDYRRKTGANAIGLDWSVPLSFARDLQKEGPVQGNLDPMLMVAGGKA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ DG++A+L LG GP IFNLGHGITPQ DP+NV LV+ VRS
Sbjct: 297 LQDGIDAVLQSLGQGPLIFNLGHGITPQADPENVTRLVQRVRS 339
>gi|148981199|ref|ZP_01816325.1| uroporphyrinogen decarboxylase [Vibrionales bacterium SWAT-3]
gi|145960955|gb|EDK26281.1| uroporphyrinogen decarboxylase [Vibrionales bacterium SWAT-3]
Length = 355
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLQQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPIACKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW++ + A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIQDAVKRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V+ IL+ G +FNLGHGI V P+N V V
Sbjct: 300 SPERIREEVSTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|292493773|ref|YP_003529212.1| uroporphyrinogen decarboxylase [Nitrosococcus halophilus Nc4]
gi|291582368|gb|ADE16825.1| uroporphyrinogen decarboxylase [Nitrosococcus halophilus Nc4]
Length = 357
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 128/347 (36%), Positives = 194/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ PIW+MRQAGRYLPEYR++R + ++FL +C TPE ++TLQP+
Sbjct: 5 KNDRLLRALLRQPVDQTPIWIMRQAGRYLPEYREVRAEARDFLTLCSTPELACKVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAI+FSDIL I DA+G + F + EGPR + P+ T+ D L
Sbjct: 65 RRFDLDAAIIFSDILTIPDAMGLGLYFSKGEGPRFERPVRTESQVAALGVPDPETE-LRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ + R++L + LIGF G+PWT+A YM+ GG KD + + + + LL+
Sbjct: 124 VMDALRLTRRELDGQVPLIGFSGSPWTLACYMVEGGASKDFALIKGLMFDQPQVMHRLLE 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL AQI AG + +FDT G L ++ +++ + RI+ + R+
Sbjct: 184 ILARAVTAYLNAQIAAGAQAVMVFDTWGGALSHRDYRDFSLSYMARIVEGLARENEGRRV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+G+DW+V L+ A ++ K+ +QGN+DP L
Sbjct: 244 PVTLFTKGGGLWLEAMAE-TGCDALGVDWTVDLAKARMQVGKQVALQGNMDPCVLYASTA 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G G +FNLGHGI P VDP+ V LV TV
Sbjct: 303 RVRQEVDEILKAYGRGSGHVFNLGHGIHPTVDPEKVAVLVDTVHELS 349
>gi|307249316|ref|ZP_07531310.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858610|gb|EFM90672.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 354
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 186/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+ + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMSLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|188532331|ref|YP_001906128.1| uroporphyrinogen decarboxylase [Erwinia tasmaniensis Et1/99]
gi|238058036|sp|B2VG77|DCUP_ERWT9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|188027373|emb|CAO95220.1| Uroporphyrinogen decarboxylase [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 181/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ L+ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDLADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIEQEVAGILEGYGHGNGHVFNLGHGIHQDVPPEHAGAFVEAVH 346
>gi|307256137|ref|ZP_07537924.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306865318|gb|EFM97214.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 354
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|261493977|ref|ZP_05990485.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494739|ref|ZP_05991218.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309556|gb|EEY10780.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310409|gb|EEY11604.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 354
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 186/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGP+ P+ + P D +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVASLNDVNQLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPHILH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L +++ ++ + +I+ + R+
Sbjct: 180 KLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHEDYKAFSLHYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRIGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI V ++ V + +
Sbjct: 299 ASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVPVESPKVFVDAIHNYS 349
>gi|90413404|ref|ZP_01221397.1| uroporphyrinogen decarboxylase [Photobacterium profundum 3TCK]
gi|90325646|gb|EAS42115.1| uroporphyrinogen decarboxylase [Photobacterium profundum 3TCK]
Length = 355
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPTTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAIGLDWTINIADANRRVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ILD G +FNLGHGI V P+N V V
Sbjct: 300 QPERIRQEVATILDGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|24461655|gb|AAN62224.1|AF440524_11 putative uroporphyrinogen decarboxylase [Pseudomonas aeruginosa]
Length = 353
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 127/350 (36%), Positives = 180/350 (51%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + ++L L ++ P+W+MRQAGRYLPEYR R + +FL +C E E+T
Sbjct: 1 MAELKNDRLLRALLREPVDVTPVWMMRQAGRYLPEYRHTRARAGDFLSLCKNRELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY+ DAAILFSDIL I DA+G + F E EGPR E + + + +
Sbjct: 61 LQPLERYDLDAAILFSDILTIPDAMGLGLYFEEGEGPRFKKTIRTETEVADLTVPDAASD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LGYVLAAVKEIRSALAGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKQMMYATPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ YL QI +GV +QIFDT G L + ++ R + +I+ + R+
Sbjct: 181 LLDKLAQTVTGYLNEQIRSGVQAVQIFDTWGGVLSGPLYLEFSLRYMKQIVDGLIRESEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F K G L+ ++A+GLDW+ + A + +QGNLDP L
Sbjct: 241 RRVPVILFTKNGGQWLEAMAE-AGADALGLDWTTNIDDARRRIGDRVALQGNLDPGALYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL GSG +FNLGHGI VDP+ V V V
Sbjct: 300 PTKRIRAEVADILARFGSGSGHVFNLGHGIHQYVDPEVVKVFVDAVHELS 349
>gi|300714859|ref|YP_003739662.1| uroporphyrinogen decarboxylase [Erwinia billingiae Eb661]
gi|299060695|emb|CAX57802.1| Uroporphyrinogen decarboxylase [Erwinia billingiae Eb661]
Length = 355
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 183/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRYN DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYNLDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFTGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +II ++R+
Sbjct: 180 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIIDGLQREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ + A + + +QGN+DP L
Sbjct: 240 GRRVPVTMFTKGGGQWLEAMAA-TGCDALGLDWTTDIGDARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGI V P++ V+ V +
Sbjct: 299 AAPARIEQEVATILAGYGNGSGHVFNLGHGIHQDVPPEHAGVFVEAVHTLS 349
>gi|238756050|ref|ZP_04617373.1| Uroporphyrinogen decarboxylase [Yersinia ruckeri ATCC 29473]
gi|238705717|gb|EEP98111.1| Uroporphyrinogen decarboxylase [Yersinia ruckeri ATCC 29473]
Length = 354
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 185/348 (53%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEHE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 -LGYVMNAVRTIRRELKGQVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPATLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + +FDT G L ++ ++ + + +I++ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMVFDTWGGVLTGRDYLEFSLQYMHKIVAGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
F KG L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGRQWLEAMAA-TGCDALGLDWTMDIAEARHRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 APAERIQQEVGTILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 346
>gi|59713009|ref|YP_205785.1| uroporphyrinogen decarboxylase [Vibrio fischeri ES114]
gi|197335479|ref|YP_002157194.1| uroporphyrinogen decarboxylase [Vibrio fischeri MJ11]
gi|75506900|sp|Q5E249|DCUP_VIBF1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226696383|sp|B5FC78|DCUP_VIBFM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|59481110|gb|AAW86897.1| uroporphyrinogen decarboxylase [Vibrio fischeri ES114]
gi|197316969|gb|ACH66416.1| uroporphyrinogen decarboxylase [Vibrio fischeri MJ11]
Length = 355
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 120/348 (34%), Positives = 182/348 (52%), Gaps = 7/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL+ G +FNLGHGI V P+N V V
Sbjct: 300 QPERIRQEVGTILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVDAVH 347
>gi|172046133|sp|Q6LLW6|DCUP_PHOPR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 HRVPVTLFTKNGGMWLEQIAA-TGCDAIGLDWTINIADANRRVGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G +FNLGHGI V P+N V V
Sbjct: 300 QPERIRQEVATILEGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|311281448|ref|YP_003943679.1| uroporphyrinogen decarboxylase [Enterobacter cloacae SCF1]
gi|308750643|gb|ADO50395.1| uroporphyrinogen decarboxylase [Enterobacter cloacae SCF1]
Length = 354
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 184/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR PI ++ P D
Sbjct: 61 LQPLRRYKLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPIASKADVEKLPVPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A +
Sbjct: 120 ELGYVMNAVRTIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 LLLDKLAKSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGDKVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V+ IL G G +FNLGHGI V P++ V V
Sbjct: 299 APPARIEEEVSTILAGFGHGEGHVFNLGHGIHQDVLPEHAGAFVDAVH 346
>gi|146305589|ref|YP_001186054.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina ymp]
gi|166234274|sp|A4XPQ6|DCUP_PSEMY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145573790|gb|ABP83322.1| uroporphyrinogen decarboxylase [Pseudomonas mendocina ymp]
Length = 355
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKAVGSLADIEALPVPDPEKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPQAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLAYMKKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP L
Sbjct: 245 PVILFTKGGGLWLESMAD-SGAEALGLDWTCDIGSARARVGSKVALQGNMDPAVLYAKPA 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGITP+VDP + + V
Sbjct: 304 AIRAEVARILAAYGAGSGHVFNLGHGITPEVDPAHAGAFFEAVHELS 350
>gi|218710875|ref|YP_002418496.1| uroporphyrinogen decarboxylase [Vibrio splendidus LGP32]
gi|218323894|emb|CAV20255.1| Uroporphyrinogen decarboxylase [Vibrio splendidus LGP32]
Length = 373
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 119/348 (34%), Positives = 184/348 (52%), Gaps = 7/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 19 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 78
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 79 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVEKIGLPDPEGE 138
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 139 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLHL 198
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 199 LLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENEG 258
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 259 RRVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSVLYA 317
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V IL+ G G +FNLGHGI V P+N V V
Sbjct: 318 QPERIREEVGTILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVDAVH 365
>gi|84393079|ref|ZP_00991845.1| uroporphyrinogen decarboxylase [Vibrio splendidus 12B01]
gi|86147874|ref|ZP_01066179.1| uroporphyrinogen decarboxylase [Vibrio sp. MED222]
gi|84376331|gb|EAP93213.1| uroporphyrinogen decarboxylase [Vibrio splendidus 12B01]
gi|85834301|gb|EAQ52454.1| uroporphyrinogen decarboxylase [Vibrio sp. MED222]
Length = 355
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 119/348 (34%), Positives = 184/348 (52%), Gaps = 7/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPKFERPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ G K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGSSSKAFTKIKKMMYAEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L++ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLESIAA-TGCDAVGLDWTINIADAKARIGDKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V IL+ G G +FNLGHGI V P+N V V
Sbjct: 300 QPERIREEVGTILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVDAVH 347
>gi|54310494|ref|YP_131514.1| uroporphyrinogen decarboxylase [Photobacterium profundum SS9]
gi|46914937|emb|CAG21712.1| putative uroporphyrinogen decarboxylase [Photobacterium profundum
SS9]
Length = 359
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+T
Sbjct: 5 MSELKNDRYLRALLKQPVDCTPVWMMRQAGRYLPEYRATRSVAGDFMSLCKNAELASEVT 64
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + +
Sbjct: 65 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 125 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPATLHL 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 185 LLDKLADSVVEYLNAQIKAGAQSVMVFDTWGGVLTPSDYNEFSLRYMHKIVDGLIRENDG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 245 HRVPVTLFTKNGGMWLEQIAA-TGCDAIGLDWTINIADANRRVGDKVALQGNMDPSILYA 303
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G +FNLGHGI V P+N V V
Sbjct: 304 QPERIRQEVATILEGYGDEGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 354
>gi|330807118|ref|YP_004351580.1| Uroporphyrinogen decarboxylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375226|gb|AEA66576.1| Uroporphyrinogen decarboxylase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 355
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 191/347 (55%), Gaps = 6/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRAKAGDFMSLCMNPQFACEVTMQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFKKVISTLADIEALPIPDPQKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++S +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LLD
Sbjct: 125 VMDAVSTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQAMHLLLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFDT G L ++ ++ + +I+S + R++
Sbjct: 185 KLAQSVTSYLNGQILAGAQAVQIFDTWGGNLSAAAYQEFSLAYMRKIVSGLIREHEGRKV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F K G L++ ++A+GLDW+ + A E + + +QGN+DP L
Sbjct: 245 PVILFTKNGGLWLESIAD-AGADALGLDWTCDIGNARERVGHKVALQGNMDPTVLYAKPD 303
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL GSG +FNLGHGITP+VDP++ ++ V
Sbjct: 304 AIRAEVGRILASYGSGSGHVFNLGHGITPEVDPEHAGAFLRAVHELS 350
>gi|303249816|ref|ZP_07336020.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307251639|ref|ZP_07533544.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302651383|gb|EFL81535.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860836|gb|EFM92844.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 354
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKTQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|209696255|ref|YP_002264185.1| uroporphyrinogen decarboxylase [Aliivibrio salmonicida LFI1238]
gi|226696370|sp|B6ENB7|DCUP_ALISL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|208010208|emb|CAQ80535.1| uroporphyrinogen decarboxylase [Aliivibrio salmonicida LFI1238]
Length = 355
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 182/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E+T
Sbjct: 1 MTELKNDRYLRALLKQPVDYTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAGLASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPAILHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ A+ R+
Sbjct: 181 LLDKLADTVIEYLNAQIKAGAQSVMVFDTWGGVLTPRDYNEFSLRYMHKIVDALIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAIGLDWTINIADAKKRIGDKVALQGNMDPSILYA 299
Query: 297 GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL+ G +FNLGHGI V P+N V V
Sbjct: 300 QPERIRQEVSTILEGFGNEGTGHVFNLGHGIHLDVPPENAGVFVDAVHELS 350
>gi|254281690|ref|ZP_04956658.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR51-B]
gi|219677893|gb|EED34242.1| uroporphyrinogen decarboxylase [gamma proteobacterium NOR51-B]
Length = 355
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 196/346 (56%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + +++ L ++ P+W+MRQAGRYLPEYR R + +F+ +C PE E+T
Sbjct: 1 MTELKNDRLIRALLREPVDRTPLWMMRQAGRYLPEYRATRAEAGSFMALCSNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL I DA+G + F E EGPR + + + + +
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDAMGLGLYFSEGEGPRFERTIDSAADVARLDPNRARDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S++RK L + LIGF G+PWT+A+YM+ GG KD + + A+ + +
Sbjct: 121 LGYVMDAVSLIRKTLDGSVPLIGFSGSPWTLATYMVEGGSSKDFAKTKAMAFNEPQQMHQ 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+ A YL Q+ G V+QIFDT G LG ++ ++ R + RII + R+
Sbjct: 181 LLEKLAQAVAVYLSEQVAQGAQVLQIFDTWGGALGHAAYQEFSLRYMTRIIEQLPREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ ++A+GLDW+ + A E + + +QGN+DP L
Sbjct: 241 RRVPVIVFTKGGGQWLEAIAG-CGADAVGLDWTTDIGAARERVGDKVALQGNMDPAMLHA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL+ G G IFNLGHG+TP ++P++V +V V
Sbjct: 300 SPERIRSEVATILERFGPGTGHIFNLGHGVTPGINPEHVGAMVDAV 345
>gi|167622424|ref|YP_001672718.1| uroporphyrinogen decarboxylase [Shewanella halifaxensis HAW-EB4]
gi|189083021|sp|B0TR87|DCUP_SHEHH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167352446|gb|ABZ75059.1| uroporphyrinogen decarboxylase [Shewanella halifaxensis HAW-EB4]
Length = 354
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFETGEGPRFERPTDTIDSIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYG 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP+ + +V
Sbjct: 300 TPERIHQEVDQILSSYGEGTGHVFNLGHGIHQHVDPERAGSFINSVHELS 349
>gi|119505546|ref|ZP_01627618.1| Uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2080]
gi|119458655|gb|EAW39758.1| Uroporphyrinogen decarboxylase [marine gamma proteobacterium
HTCC2080]
Length = 360
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 127/346 (36%), Positives = 194/346 (56%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ + + L L ++ P+W+MRQAGRYLPEYR+IR++ +F+ +C PE E+T
Sbjct: 1 MSDLKNDRFLRALLREPVDRTPLWMMRQAGRYLPEYREIRQQAGSFMSLCSNPELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+RRY DAAILFSDIL I DA+G + F E EGP + + ++
Sbjct: 61 MQPLRRYAMDAAILFSDILTIPDAMGLGLYFAEGEGPGFERPLQGAADIEALEPTRAVSE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S++R++L + LIGF G+PWT+A+YM+ GG KD + + A+ + +
Sbjct: 121 LGYVMDAVSLIRRELKGDVPLIGFSGSPWTLATYMVEGGSSKDFAKVKSLAFNDPAIMHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+D A YL AQ+ G +QIFDT G L + ++ + + RII + R+
Sbjct: 181 LLEKLADAVAMYLTAQVEHGAQALQIFDTWGGALSHAAYPEFSLQYMTRIIEQLPREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ ++A+GLDW+ + A + +QGN+DP L
Sbjct: 241 RRVPVIVFTKGGGQWLEAIAE-CGADAVGLDWTTDMGAARQRVGDRVALQGNMDPSMLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V ++LD G G +FNLGHGITP V+P +V +V V
Sbjct: 300 APGRIRSEVASVLDSFGQGTGHVFNLGHGITPGVNPDHVSAMVDAV 345
>gi|149907610|ref|ZP_01896357.1| uroporphyrinogen decarboxylase [Moritella sp. PE36]
gi|149809280|gb|EDM69209.1| uroporphyrinogen decarboxylase [Moritella sp. PE36]
Length = 354
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALAKESVDQTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F E EGP+ + T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFSEGEGPKFERPITCKADVDKIGMPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ G K + + A+ + +
Sbjct: 121 LQYVMNAVRTIRKNLNGSVPLIGFSGSPWTLATYMVEGSGTKTFTKIKKMAFSEPQTLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L ++++++ + + +I+ + R
Sbjct: 181 LLDKLADSVISYLNAQIAAGAQSVMVFDTWGGVLSPRDYKDFSLQYMHKIVDGLTRFNDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G ++ T +AIGLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKNGGQWIEQIAA-TGCDAIGLDWTIDIAEAKARVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + V+ IL G+G + NLGHGI V+P+ ++ V
Sbjct: 300 SPERIREEVSTILAGFGTGNGHVMNLGHGIHLDVEPEKAGVFIEAV 345
>gi|331005315|ref|ZP_08328704.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC1989]
gi|330420891|gb|EGG95168.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC1989]
Length = 354
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 192/351 (54%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ + + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+T
Sbjct: 1 MSDLKNDRFLRALARQPVDRTPVWMMRQAGRYLPEYRASRAKAGDFMGLCGNPEMACEVT 60
Query: 60 LQPIRRY-NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL I DA+G + F EGP+ + + +
Sbjct: 61 LQPLDRYSQIDAAILFSDILTIPDAMGLGLYFETGEGPKFKKTVHTAADIEALPVVDTRS 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S++RK+L + LIGF G+PWT+A+YM+ GG KD+ + + YQ+ F
Sbjct: 121 DLSYVTDAVSLIRKELNGRVPLIGFSGSPWTLATYMVEGGSSKDYARTKELMYQHPEVFQ 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L +YL AQI AG +QIFD+ G L H + Y+ + RI+ + ++
Sbjct: 181 LLIDKLVASITDYLNAQILAGAQAVQIFDSWGGALSHHAYHQYSLAPMQRIVDGLIKENE 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L + T ++A+GLDW+ +S+A ++ + +QGN+DP L
Sbjct: 241 GRRVPVILFTKGGGQWLPSLAN-TGADALGLDWTTDISYARQQVGDQVALQGNMDPAILY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHG+TPQ P+NV + V
Sbjct: 300 TNPARIREEVATILAAYGKGNGHVFNLGHGVTPQAKPENVGAFFEAVHELS 350
>gi|307302556|ref|ZP_07582313.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti BL225C]
gi|306903226|gb|EFN33816.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti BL225C]
Length = 343
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 207/345 (60%), Positives = 258/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +K+LEVL G + PPPIWLMRQAGRYLPEYR +R K +FLD+CYTP+ VE+TL
Sbjct: 1 MSETHRKVLEVLSGRALTPPPIWLMRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI D L RNVRF E +GPRMDPI I L+P D + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDGLKRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRRELPTETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI AG D +QIFD+ AG LGE EF+ +A V R+I++VR + P+A
Sbjct: 179 LTLLADISADYLVKQIDAGADAVQIFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDW VPL+FA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGLLLKNYRQATGADAIGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + ILDVLG GP IFNLGHGITP DP +V LV VR +
Sbjct: 299 QEHGTDRILDVLGQGPLIFNLGHGITPDADPNHVAALVARVRGSR 343
>gi|152979635|ref|YP_001345264.1| uroporphyrinogen decarboxylase [Actinobacillus succinogenes 130Z]
gi|171704382|sp|A6VQT2|DCUP_ACTSZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150841358|gb|ABR75329.1| uroporphyrinogen decarboxylase [Actinobacillus succinogenes 130Z]
Length = 354
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MSQLKNDRYLRALLREPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGP+ + N I
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVENAAMVENLPIPDPETE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELQGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQTLHK 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD +SD YL AQI AG + IFDT G L ++ +++ + + +I++ + R+
Sbjct: 181 LLDKVSDAVILYLNAQIKAGAQAVMIFDTWGGVLAHRDYPDFSLQYMQKIVAGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ + +A+G+DW+V L+ A ++ + +QGN+DP L
Sbjct: 241 RKVPITLFTKGGGLWLEQIAN-SGCDAVGVDWTVNLAEAKAKIGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G+G +FNLGHGI V +N V V
Sbjct: 300 RPARIRQEVRSILADFGNGSGHVFNLGHGIHQDVPVENPKIFVDAVHEYS 349
>gi|157960256|ref|YP_001500290.1| uroporphyrinogen decarboxylase [Shewanella pealeana ATCC 700345]
gi|189083022|sp|A8GZL8|DCUP_SHEPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157845256|gb|ABV85755.1| uroporphyrinogen decarboxylase [Shewanella pealeana ATCC 700345]
Length = 354
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MAELKNDRYLRALLKQPVDRTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKNQDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DA+G + F EGPR + T + I +
Sbjct: 61 LQPLRRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPRFERPTDTIDSIKKLCIPDPEDE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++S +R++L + LIGF G+PWT+A+YM+ GG K + + AY+ +
Sbjct: 121 LGYVMRAVSTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFEKIKKMAYEEPATLHM 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQ+ G + IFD+ G L H + ++ R + +I+ + R
Sbjct: 181 LLDKLADSVTLYLNAQVANGAQSLMIFDSWGGALSHHAYREFSLRYMQKIVDGLTRHADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L++ T +A+GLDW+V + A + + +QGN+DP L
Sbjct: 241 RQVPVTLFTKGGGLWLESMAE-TGCDALGLDWTVDIGDARRRVGHKVALQGNMDPSVLYG 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ IL G G +FNLGHGI VDP+ + +V
Sbjct: 300 TPERIHQEVDQILASYGEGTGHVFNLGHGIHQHVDPERAGSFINSVHELS 349
>gi|165975568|ref|YP_001651161.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|238058009|sp|B0BS17|DCUP_ACTPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|165875669|gb|ABY68717.1| uroporphyrinogen-III decarboxylase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
Length = 354
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKAFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTIDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|220936178|ref|YP_002515077.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
gi|254767709|sp|B8GPU3|DCUP_THISH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|219997488|gb|ACL74090.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
Length = 351
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 188/347 (54%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + ++L L ++ P+W+MRQAGRYLPEYR R + +F+D+C +PE E+T
Sbjct: 1 MNELKNDRLLRALLREPVDTTPVWIMRQAGRYLPEYRATRARAGSFMDLCQSPEMACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R+ DAAILFSDIL I DA+G + F E EGPR + + +
Sbjct: 61 LQPLERFPLDAAILFSDILTIPDAMGLGLYFSEGEGPRFERPVQDAAAIRALGVPDPETE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ ++R++L + LIGF G+PWT+A+YM+ GG K+ + + Y + +
Sbjct: 121 LRYVTDAVRLIRRELDGRVPLIGFSGSPWTLATYMVEGGSSKEFARIKGMLYDDPSTLHH 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L++ YL AQI AG + +FDT G L + ++ + RI++ + R++
Sbjct: 181 LLGVLAEAVTVYLNAQIAAGAQAVMVFDTWGGSLTPEGYREFSLAYMQRIVAGLTREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V + A + +QGNLDP L
Sbjct: 241 RRVPVTLFTKGGGAWLEVMAE-TGCDALGLDWTVNIGEARRRVGDRVALQGNLDPAVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + +++ G G +FNLGHGI P +DP+ V LV V
Sbjct: 300 SAERVRAAARKVVEDFGPGSGHVFNLGHGIHPGIDPEKVAALVDEVH 346
>gi|307316113|ref|ZP_07595557.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti AK83]
gi|306897953|gb|EFN28695.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti AK83]
Length = 343
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 207/345 (60%), Positives = 258/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +K+LEVL G + PPPIWLMRQAGRYLPEYR +R K +FLD+CYTP+ VE+TL
Sbjct: 1 MSETHRKVLEVLSGRALTPPPIWLMRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI D L RNVRF E +GPRMDPI I L+P D + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDGLKRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRRELPTETTLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI AG D +QIFD+ AG LGE EF+ +A V R+I++VR + P+A
Sbjct: 179 LTLLADISADYLVKQIDAGADAVQIFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDW VPL+FA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGLLLKNYRQATGADAIGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGTA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + ILDVLG GP IFNLGHGITP DP +V LV VR +
Sbjct: 299 QEHGTDRILDVLGQGPLIFNLGHGITPDADPNHVAALVARVRGSR 343
>gi|300721649|ref|YP_003710924.1| uroporphyrinogen decarboxylase [Xenorhabdus nematophila ATCC 19061]
gi|297628141|emb|CBJ88692.1| uroporphyrinogen decarboxylase [Xenorhabdus nematophila ATCC 19061]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 6/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R++ +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDITPVWMMRQAGRYLPEYKATRQEAGDFISLCKNTELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G + F EGPR + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFHAPVMNHADVEKLPVPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LGYVMAAVRAIRKALAGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKAMMYAEPATLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L++ YL AQI AG + IFDT G L ++ ++ + +I+ + R++
Sbjct: 181 LLDKLANSVILYLNAQIKAGAQSVMIFDTWGGVLSHRDYLEFSLHYMHKIVDGLIREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWITNIADARRRVGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V+ IL G+G +FNLGHGI V P++ V+ V +
Sbjct: 300 APARIEEEVSTILHDFGAGAGHVFNLGHGIHQDVPPEHAGAFVEAVHRLSV 350
>gi|126207600|ref|YP_001052825.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
L20]
gi|190149381|ref|YP_001967906.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307262699|ref|ZP_07544327.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|166234229|sp|A3MYI4|DCUP_ACTP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058008|sp|B3GZV2|DCUP_ACTP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126096392|gb|ABN73220.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189914512|gb|ACE60764.1| uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871954|gb|EFN03670.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|293390872|ref|ZP_06635206.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951406|gb|EFE01525.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTTLKNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPHLLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R++
Sbjct: 181 LLDKLADSVTLYLNAQIKAGAQAVMVFDTWGGVLAHRDYPAFSLHYMHKIVDGLIREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGNLDP L
Sbjct: 241 HRVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAEARRRVGHKVALQGNLDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V +IL G+G +FNLGHGI V ++ LV V
Sbjct: 300 PANRIEDEVRSILAAFGAGNGHVFNLGHGIHQDVPVESPKRLVDAVH 346
>gi|289207457|ref|YP_003459523.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. K90mix]
gi|288943088|gb|ADC70787.1| uroporphyrinogen decarboxylase [Thioalkalivibrio sp. K90mix]
Length = 352
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 193/349 (55%), Gaps = 7/349 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++L L ++ PPIW+MRQAGRYLPEYR+ R + +F+++C PE E+T+Q
Sbjct: 4 TLKNDRLLRALLREPVDRPPIWIMRQAGRYLPEYRETRAQAGSFMNLCQNPELACEVTMQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAILFSDIL I DA+G + F EGPR DPI + E P D L
Sbjct: 64 PLRRFPLDAAILFSDILTIPDAMGLGLYFETGEGPRFRDPIRSLEAIENLPVPDPE-QEL 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R++L + LIGF G+PWT+A+YM+ G +D + + Y +A + L
Sbjct: 123 RYVMDAVRLIRRELNGEVPLIGFAGSPWTLATYMVEGQGSRDFAETKRLMYGEPQAMHAL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L ++ EYL AQI AG + +FDT G L + ++ + RI+ + R +
Sbjct: 183 LQKVATAVTEYLNAQIRAGAQAVMVFDTWGGSLTPRGYREFSLAYMQRIVDGLIRDHDGR 242
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
F KG L+ T ++A+GLDW++ ++ A + +QGNLDP L
Sbjct: 243 RVPVTLFTKGGDAWLEAQAE-TGADALGLDWTIEIAEASRRVGDRVALQGNLDPSVLYAP 301
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ + +LD +FNLGHGI P +DP+ V LV+TV S +
Sbjct: 302 DAVVREEALRVLDGFDRDTGHVFNLGHGIHPGIDPERVATLVETVTSYR 350
>gi|89075372|ref|ZP_01161794.1| uroporphyrinogen decarboxylase [Photobacterium sp. SKA34]
gi|89048921|gb|EAR54490.1| uroporphyrinogen decarboxylase [Photobacterium sp. SKA34]
Length = 355
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLSALLKQPVDYTPVWMMRQAGRYLPEYRETRSVAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP++R+ DAAILFSDIL I DA+G + F EGP+ T + + +
Sbjct: 61 LQPLKRFPLDAAILFSDILTIPDAMGLGLYFEAGEGPKFQRPITCKADVDKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRHDLKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLRL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVTEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T + +GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL+ G G +FNLGHGI V P+N V+ V
Sbjct: 300 QPERIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 350
>gi|226941735|ref|YP_002796809.1| DcuP [Laribacter hongkongensis HLHK9]
gi|226716662|gb|ACO75800.1| DcuP [Laribacter hongkongensis HLHK9]
Length = 355
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 181/349 (51%), Gaps = 9/349 (2%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + L L + P+W+MRQAGRYLPEYR R + NFL +C +PE E+
Sbjct: 1 MTTALKNDTFLRALLRQPTDYTPVWMMRQAGRYLPEYRATRARAGNFLALCKSPELACEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
TLQP+ R+ DAAILFSDIL + DA+G + F E EGP+ + P+ + D+
Sbjct: 61 TLQPLERFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLRDEADIRRLCKPDVGT 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L + ++S +RK L + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 121 E-LKYVTDAVSTIRKALDGRVPLIGFSGSPWTLACYMVEGGSSSDFRTIKTMAYSRPDLL 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ +L +D +YL AQI AG +QIFDT G L + ++ + RII+ + R+
Sbjct: 180 HHILSVTADTVIDYLNAQIAAGAQAVQIFDTWGGALSHAAYREFSLAYMQRIIAGLNREA 239
Query: 238 PN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
I F KG G L+ T ++A+GLDW+ + A + +QGN DP+ L
Sbjct: 240 EGRRVPVIVFTKGGGQWLEAMAD-TGADALGLDWTTDIGDARRRVGDRVALQGNFDPVAL 298
Query: 295 VVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL GSG +FNLGHGI V P++ V+ V+
Sbjct: 299 HAPAAAIETEVARILAAYGSGSGHVFNLGHGIGQTVPPEHAAAFVEAVQ 347
>gi|167855817|ref|ZP_02478569.1| uroporphyrinogen decarboxylase [Haemophilus parasuis 29755]
gi|167853030|gb|EDS24292.1| uroporphyrinogen decarboxylase [Haemophilus parasuis 29755]
Length = 354
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 183/347 (52%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T+QP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDIL I DA+G + F EGP+ PI + P D L
Sbjct: 65 RRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIERKADVDHLPIPDPE-QELQY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + LLD
Sbjct: 124 VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPALLHALLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D YL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 184 KLADSVILYLNAQIKAGSQSVMVFDTWGGVLAHRDYNEFSLRYMHKIVDGLIRENDGRKV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L +
Sbjct: 244 PVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYASPE 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V AIL G G +FNLGHGI V ++ V +V +
Sbjct: 303 RIEQEVKAILAGFGQGSGHVFNLGHGIHQDVPIESPKVFVDSVHAFS 349
>gi|307244920|ref|ZP_07527017.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253874|ref|ZP_07535726.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258328|ref|ZP_07540069.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854085|gb|EFM86293.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863078|gb|EFM95020.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867512|gb|EFM99359.1| Uroporphyrinogen decarboxylase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 354
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 186/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MNQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+ WT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSSWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|291612589|ref|YP_003522746.1| uroporphyrinogen decarboxylase [Sideroxydans lithotrophicus ES-1]
gi|291582701|gb|ADE10359.1| uroporphyrinogen decarboxylase [Sideroxydans lithotrophicus ES-1]
Length = 354
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 187/346 (54%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L P+W+MRQAGRYLPEY RK+ +FL++C +P+ E+TLQP+
Sbjct: 6 KNDTFLRALLREPTEYTPLWMMRQAGRYLPEYCATRKRAGSFLNLCKSPDMATEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGP+ + T E + + L +
Sbjct: 66 DRFPLDAAILFSDILTVPDAMGLGLYFSEGEGPKFERPLTTEAAIKALRVPDIGKDLKYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +RK L + LIGF G+PWT++ YM+ GG D+ + + Y+ + + +L
Sbjct: 126 TDAVSQIRKALDGRVPLIGFTGSPWTLSCYMVEGGSSDDYAKVKTLMYKEPKLMHHILSV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF- 242
+D EYL AQI AG + IFD+ G L + ++ + RI+ ++R++ K
Sbjct: 186 TADAVTEYLNAQIEAGAQAVMIFDSWGGALSHAAYHEFSLPYMQRIVQGLKREHDGVKIP 245
Query: 243 -ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G +++ + +A+GLDW++ + A ++ + +QGNLDP L +V
Sbjct: 246 SIVFTKGGGLWIESIADI-GCDAVGLDWTMDIGVARQKVGHKVALQGNLDPTILFATPEV 304
Query: 301 MIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G +FNLGHGI+ +P N LV+ V
Sbjct: 305 IHNEVEKILSSYGYGSGHVFNLGHGISQFTNPDNAAALVQAVHELS 350
>gi|315635143|ref|ZP_07890421.1| uroporphyrinogen decarboxylase [Aggregatibacter segnis ATCC 33393]
gi|315476105|gb|EFU66859.1| uroporphyrinogen decarboxylase [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSTLKNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + + + + N I
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPIPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPHLLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L E+ ++ R + +I+ + R++
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHREYPEFSLRYMHKIVDGLIREHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAKARHRIGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V +IL G G +FNLGHGI V ++ LV V
Sbjct: 300 PAGRIEDEVRSILAAFGEGSGHVFNLGHGIHQDVPEESPKVLVDAVH 346
>gi|294634216|ref|ZP_06712762.1| uroporphyrinogen decarboxylase [Edwardsiella tarda ATCC 23685]
gi|291092361|gb|EFE24922.1| uroporphyrinogen decarboxylase [Edwardsiella tarda ATCC 23685]
Length = 354
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 181/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY R + +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYNATRAQAGDFIALCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR+ DAAILFSDIL + DA+G + F EGPR PIT + P D
Sbjct: 61 LQPLRRFPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTRPITCRADIDRLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R+ L + LIGF G+PWT+A+YM+ GG K + + Y + A +
Sbjct: 120 ELGYVMAAVRTIRRNLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPAALH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L ++ ++ + + +I+ ++R+
Sbjct: 180 HLLDKLAQSVILYLNAQIRAGAQAVMIFDTWGGVLTGRDYREFSLQYMHQIVDGLQRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTCDIADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI V P+ V+ V
Sbjct: 299 APAARIEQEVADILAGFGQGEGHVFNLGHGIHQDVPPEQAGIFVEAVH 346
>gi|322515117|ref|ZP_08068122.1| uroporphyrinogen decarboxylase [Actinobacillus ureae ATCC 25976]
gi|322118882|gb|EFX91069.1| uroporphyrinogen decarboxylase [Actinobacillus ureae ATCC 25976]
Length = 354
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 116/350 (33%), Positives = 184/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ + + L+ L ++ P+W+MRQAGRYL EY+ R + +F+ +C + E+T
Sbjct: 1 MSQLKNDRYLKALLREPVDMTPVWMMRQAGRYLSEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + + N I
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIENKARVENLPIPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPQILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI +G + +FDT G L +E++ ++ + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKSGAQAVMVFDTWGGVLAHNEYKEFSLCYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW++ ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTIDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 PPERIEQEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKIFVDAVHEYS 349
>gi|50085555|ref|YP_047065.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ADP1]
gi|81695805|sp|Q6F9M1|DCUP_ACIAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49531531|emb|CAG69243.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ADP1]
Length = 358
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 131/353 (37%), Positives = 187/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C E+ E+T
Sbjct: 1 MTALKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAQAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E +LN +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFKKTIRTEQDVLNLPNFNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++ + L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LDYVMNAVTTIHSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRYTKHMMYSQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ +YL AQI AG +QIFD+ G L E+ ++ + +I++ ++R+
Sbjct: 181 LLDRLAVAVIDYLNAQIDAGAQAVQIFDSWGGALAHREYTEFSLNYMRKIVAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++AIGLDW+ PL+ A + + +QGNLDP L
Sbjct: 241 RRIPVILFTKGGGQWLEPMIA-TGADAIGLDWTTPLNVARKTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD + +I NLGHGIT VDP V TV
Sbjct: 300 SAASIEKSVKAMLDDAYANGETTGYIANLGHGITQWVDPSQPKIFVDTVHEYS 352
>gi|257464752|ref|ZP_05629123.1| uroporphyrinogen decarboxylase [Actinobacillus minor 202]
gi|257450412|gb|EEV24455.1| uroporphyrinogen decarboxylase [Actinobacillus minor 202]
Length = 354
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MTQLKNDRYLRALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ PI P D
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENLTQVQNLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPHILH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLADSVIFYLNAQIKAGAQAVMIFDTWGGVLAHQDYKTFSLHYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G+G +FNLGHGI V ++ V +
Sbjct: 299 ANADRIEQEVSQILAGFGNGSGHVFNLGHGIHQDVPVESPKIFVDAIHELS 349
>gi|292897975|ref|YP_003537344.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC 49946]
gi|291197823|emb|CBJ44918.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC 49946]
Length = 355
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 181/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDMADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 346
>gi|325122921|gb|ADY82444.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus PHEA-2]
Length = 357
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 186/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|86131005|ref|ZP_01049604.1| uroporphyrinogen decarboxylase [Dokdonia donghaensis MED134]
gi|85818416|gb|EAQ39576.1| uroporphyrinogen decarboxylase [Dokdonia donghaensis MED134]
Length = 342
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 198/349 (56%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+
Sbjct: 1 MSIKNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITV 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFL 117
QPIRRY DAAILFSDILVI A+ +V N GP + +PI + + + P+ID L
Sbjct: 60 QPIRRYGMDAAILFSDILVIPQAMNIDVEMKPNVGPWLPNPIRSAKDVEQVIVPDIDETL 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y + +I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A
Sbjct: 120 GY---VMDAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPLAA 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 177 HALLQKITDTTIAYLKKKVEAGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKDE- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
A I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 236 --APVIAFGKGCWFALDKMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFS 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 293 PPSEIKRMVHEMINEFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|332291692|ref|YP_004430301.1| uroporphyrinogen decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169778|gb|AEE19033.1| uroporphyrinogen decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
Length = 342
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 199/349 (57%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+
Sbjct: 1 MSIKNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITV 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFL 117
QPIRRY DAAILFSDILVI A+ +V N GP + +PI + + + P+ID L
Sbjct: 60 QPIRRYGMDAAILFSDILVIPQAMNIDVEMKPNVGPWLPNPIRSAKDVEQVIVPDIDETL 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y + +I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A
Sbjct: 120 GY---VMDAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPLAA 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 177 HALLQKITDTTIAYLKKKVEAGVNAVQVFDSWGGMLSPVDYQEFSWQYIKQIIDALKDE- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
A I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 236 --APVIAFGKGCWFALDKMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFS 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 293 PPREIKRMVHEMINEFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|255318423|ref|ZP_05359656.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SK82]
gi|262378653|ref|ZP_06071810.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SH164]
gi|255304415|gb|EET83599.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SK82]
gi|262299938|gb|EEY87850.1| uroporphyrinogen decarboxylase [Acinetobacter radioresistens SH164]
Length = 357
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 131/353 (37%), Positives = 183/353 (51%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDSTPVWMMRQAGRYLPEYRETRAKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDALGLGLYFEAGEGPKFKKTVRTEQDVANLPAFNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG KD + Y +
Sbjct: 121 LDYVMNAVSAIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKDFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ EYL AQI AG +QIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDRLAVAVTEYLNAQIDAGAQAVQIFDSWGGALAHREYLEFSLNYMQKIITGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL A + + +QGNLDP L
Sbjct: 241 RRIPVILFTKGGGQWLEQMVA-TGADAFGLDWTTPLHVARQTVNGRAALQGNLDPATLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ A+LD +I NLGHGIT VDP + + TV
Sbjct: 300 SATTIEKATKAMLDDAYLNGEKTGYIANLGHGITQWVDPAHPKVFIDTVHEYS 352
>gi|116254466|ref|YP_765604.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv. viciae
3841]
gi|123081718|sp|Q1MA15|DCUP_RHIL3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115259114|emb|CAK10225.2| putative uroporphyrinogen decarboxylase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 343
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 206/343 (60%), Positives = 263/343 (76%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTPE+ VE+TL
Sbjct: 1 MSDTGRKIMRVLSGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPEHAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGSLN--GEEVVDYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY+++RAF L
Sbjct: 119 RPVLETVRRLREELPAETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHARAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVSA+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P+A
Sbjct: 179 LMLLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAIRPVARMIASVKSRRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G +
Sbjct: 239 RIIAFAKGAGYQLKTYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +G++ IL LG+GP IFNLGHGITPQ DP++V LV VR
Sbjct: 299 LEEGIDDILQHLGNGPLIFNLGHGITPQADPEHVRLLVDRVRG 341
>gi|284009056|emb|CBA76020.1| uroporphyrinogen decarboxylase [Arsenophonus nasoniae]
Length = 368
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 183/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + L L ++ P+W+MRQAGRYLPEYR+IR++ +FL +C E E+T
Sbjct: 15 MSALTNDRYLRALLRQPVDTTPVWMMRQAGRYLPEYRKIREQAGDFLSLCKNTELACEVT 74
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL I DA+G + F EGPR PI P D
Sbjct: 75 LQPLHRFPLDAAILFSDILTIPDAMGLGLYFSVGEGPRFQRPIGCLADIEKLPIPDPE-Q 133
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L+ + +I +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 134 ELVYVMNAIRAIRKALQGKVPLIGFSGSPWTLATYMVEGGSSKAFTRIKKLMYTEPKTLH 193
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+ YL AQI AG + IFDT G L ++ ++ + +II ++ R++
Sbjct: 194 LLLDKLTQSVILYLNAQIRAGAQSVMIFDTWGGVLTGRDYHQFSLHYMHQIIDSLLREHE 253
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+G+DW + A + + +QGN++P L
Sbjct: 254 GRKVPVTLFTKGGGQWLEAMAA-TGCDALGIDWMTDIKEARSRVGDKVALQGNMEPSILY 312
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI + P++V + + +V
Sbjct: 313 ASKERIELEVKTILKQFGQGSGHVFNLGHGIHQDIPPEHVKNFINSVH 360
>gi|261365622|ref|ZP_05978505.1| uroporphyrinogen decarboxylase [Neisseria mucosa ATCC 25996]
gi|288565858|gb|EFC87418.1| uroporphyrinogen decarboxylase [Neisseria mucosa ATCC 25996]
Length = 353
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L
Sbjct: 63 PLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFEHALQHEADIAKLQVP-DMEKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L+N + ++A+GLDW+ + A + + +QGN DP L
Sbjct: 242 VPVIVFAKGGGLWLENMAEI-GADALGLDWTCNIGEARHRVGNQVALQGNFDPFALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI DP++ LV V
Sbjct: 301 ESIRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDAVHELS 348
>gi|260549742|ref|ZP_05823959.1| uroporphyrinogen decarboxylase [Acinetobacter sp. RUH2624]
gi|260407259|gb|EEX00735.1| uroporphyrinogen decarboxylase [Acinetobacter sp. RUH2624]
Length = 357
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 134/353 (37%), Positives = 186/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|292486744|ref|YP_003529614.1| uroporphyrinogen decarboxylase [Erwinia amylovora CFBP1430]
gi|291552161|emb|CBA19198.1| uroporphyrinogen decarboxylase [Erwinia amylovora CFBP1430]
Length = 356
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 181/348 (52%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPE-Q 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQTLH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 181 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLREND 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 241 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDMADARRRVGDRVALQGNMDPSMLY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 300 ASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 347
>gi|238058022|sp|A3M795|DCUP_ACIBT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193077899|gb|ABO12789.2| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 17978]
Length = 357
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 134/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|262372119|ref|ZP_06065398.1| uroporphyrinogen decarboxylase [Acinetobacter junii SH205]
gi|262312144|gb|EEY93229.1| uroporphyrinogen decarboxylase [Acinetobacter junii SH205]
Length = 357
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR R + +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRATRSQAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYHLDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNSKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LAYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKNMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL A E + +QGNLDP L
Sbjct: 241 RRIPIIVFTKGGGQWLETML-TTGADAFGLDWTTPLYTAREVVNGRAALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD +I NLGHGIT VDP V TV +
Sbjct: 300 SAASIEKSVKAMLDDAYKNGEKTGYIANLGHGITQWVDPAQPKIFVDTVHAYS 352
>gi|310766090|gb|ADP11040.1| uroporphyrinogen decarboxylase [Erwinia sp. Ejp617]
Length = 355
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 179/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 180 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDMADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIEQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 346
>gi|261867384|ref|YP_003255306.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412716|gb|ACX82087.1| uroporphyrinogen decarboxylase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 354
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 185/347 (53%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTTLKNDRYLRALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+Y++ GG K + + Y +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYIVEGGSSKAFTKIKKMLYAEPHLLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L ++ ++ + +I+ + R++
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVIVFDTWGGVLAHRDYPAFSLHYMHKIVDGLIREHEE 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGNLDP L
Sbjct: 241 RRVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIAEARRRVGHKVALQGNLDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V +IL G+G +FNLGHGI V ++ LV V
Sbjct: 300 PANRIEDEVRSILAAFGAGNGHVFNLGHGIHQDVPVESPKRLVDAVH 346
>gi|239502498|ref|ZP_04661808.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB900]
Length = 357
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 136/353 (38%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PLS A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLSTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|240948536|ref|ZP_04752909.1| uroporphyrinogen decarboxylase [Actinobacillus minor NM305]
gi|240297044|gb|EER47615.1| uroporphyrinogen decarboxylase [Actinobacillus minor NM305]
Length = 354
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MTQLKNDRYLRALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ PI P D
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENLTQVQNLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPHILH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 180 ALLDKLADSVILYLNAQIKAGAQAVMIFDTWGGVLAHQDYKTFSLHYMHKIVDGLMRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLEAIAA-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ IL G+G +FNLGHGI V ++ V +
Sbjct: 299 ANADRIEQEVSQILAGFGNGSGHVFNLGHGIHQDVPVESPKIFVDAIHELS 349
>gi|299769284|ref|YP_003731310.1| uroporphyrinogen decarboxylase [Acinetobacter sp. DR1]
gi|298699372|gb|ADI89937.1| uroporphyrinogen decarboxylase [Acinetobacter sp. DR1]
Length = 357
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 131/353 (37%), Positives = 186/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSQAGDFLSLCKNTDFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPIIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V ++LD +I NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKSMLDDAYANGEKTGYIANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|262278336|ref|ZP_06056121.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus
RUH2202]
gi|262258687|gb|EEY77420.1| uroporphyrinogen decarboxylase [Acinetobacter calcoaceticus
RUH2202]
Length = 357
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 132/353 (37%), Positives = 184/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C ++ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTDFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ L A + +QGNLDP L
Sbjct: 241 RRIPIIVFTKGGGQWLEPMIS-TGADALGLDWTTRLDTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD +I NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYIANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|293609703|ref|ZP_06692005.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828155|gb|EFF86518.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 357
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 186/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFQKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVTDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARNIVSGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|294670477|ref|ZP_06735357.1| hypothetical protein NEIELOOT_02194 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307756|gb|EFE48999.1| hypothetical protein NEIELOOT_02194 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 353
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 186/350 (53%), Gaps = 7/350 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T
Sbjct: 1 MTTLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + +
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 120 LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 180 ILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L
Sbjct: 240 RRVPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI DP++ LV +V
Sbjct: 299 TPESIRTEVARILADYGQGSGHVFNLGHGINQHADPEHAKILVDSVHELS 348
>gi|169795244|ref|YP_001713037.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AYE]
gi|213158088|ref|YP_002320139.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB0057]
gi|215482782|ref|YP_002324983.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB307-0294]
gi|260556713|ref|ZP_05828931.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 19606]
gi|301347443|ref|ZP_07228184.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB056]
gi|301596122|ref|ZP_07241130.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB059]
gi|332854141|ref|ZP_08435199.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013150]
gi|332867907|ref|ZP_08437909.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013113]
gi|226723862|sp|B7GZK6|DCUP_ACIB3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723863|sp|B7I451|DCUP_ACIB5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058007|sp|B0VBT2|DCUP_ACIBY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169148171|emb|CAM86034.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AYE]
gi|213057248|gb|ACJ42150.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB0057]
gi|213987817|gb|ACJ58116.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB307-0294]
gi|260409972|gb|EEX03272.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 19606]
gi|332728197|gb|EGJ59583.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013150]
gi|332733680|gb|EGJ64838.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6013113]
Length = 357
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 134/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|329894548|ref|ZP_08270356.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC3088]
gi|328922986|gb|EGG30312.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC3088]
Length = 358
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 133/344 (38%), Positives = 188/344 (54%), Gaps = 5/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + + L L ++ PIW+MRQAGRYLPEYR R + +FLD+C E E+T+Q
Sbjct: 3 NLKNDRFLRALMRQPVDRTPIWMMRQAGRYLPEYRATRAQAGSFLDLCKNTELACEVTMQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+RRY DAAILFSDIL I DALG + F E EGPR E + N + L
Sbjct: 63 PLRRYPMDAAILFSDILTIPDALGLGLYFEEGEGPRFHKTVRCEADIDALNDFKAADDLS 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S +R +L + LIGF G+PWT+A+YM+ GG KD + + AY + LL
Sbjct: 123 YVMDAVSAIRNELNGEVPLIGFSGSPWTLATYMVEGGSSKDFARVKAMAYDQPEVMHKLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
L+D A+YL AQI AG +QIFDT G L ++ ++ + + RII+ + ++
Sbjct: 183 ALLADAVADYLNAQIAAGAQAVQIFDTWGGSLSASAYKVFSLKYMQRIIAQLTKEADGRS 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I F K G L + +N +GLDW+ + A ++ +QGN+DP L
Sbjct: 243 VPVIVFTKNGGQWLSSIAD-CGANCVGLDWTTDIGSARQQIGSRVALQGNMDPAILYASP 301
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V IL+ G G IFNLGHG+TP V+P +V V V
Sbjct: 302 ARIREEVATILESFGHGSGHIFNLGHGVTPGVNPDHVKAFVDAV 345
>gi|169632914|ref|YP_001706650.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii SDF]
gi|238058011|sp|B0VUQ9|DCUP_ACIBS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169151706|emb|CAP00499.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii]
Length = 357
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 134/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|251793495|ref|YP_003008224.1| uroporphyrinogen decarboxylase [Aggregatibacter aphrophilus NJ8700]
gi|247534891|gb|ACS98137.1| uroporphyrinogen decarboxylase [Aggregatibacter aphrophilus NJ8700]
Length = 354
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 186/347 (53%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L+ L ++ PIW+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MTTLKNDRYLKALLRQPVDMTPIWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DA+G + F EGP+ + + + + N +
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFERVIDSKSAVENLPVPDPEQE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRTIRRELNCEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYSEPHLLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L E+ ++ R + +I+ + R++
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHREYPEFSLRYMHKIVDGLIREHDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDVAEARRRIGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V +IL G G +FNLGHGI V ++ LV V
Sbjct: 300 PAGRIEDEVRSILAAFGEGSGHVFNLGHGIHQDVPTESPKVLVDAVH 346
>gi|308388967|gb|ADO31287.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
alpha710]
gi|325129906|gb|EGC52707.1| uroporphyrinogen decarboxylase [Neisseria meningitidis OX99.30304]
gi|325131985|gb|EGC54684.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M6190]
gi|325135996|gb|EGC58606.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M0579]
gi|325202423|gb|ADY97877.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240149]
gi|325207825|gb|ADZ03277.1| uroporphyrinogen decarboxylase [Neisseria meningitidis NZ-05/33]
Length = 354
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 124/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDEAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|298368861|ref|ZP_06980179.1| uroporphyrinogen decarboxylase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282864|gb|EFI24351.1| uroporphyrinogen decarboxylase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 353
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 185/347 (53%), Gaps = 8/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPVWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTVQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL + DA+G + F E EGP+ P+ + D ++ L
Sbjct: 65 ERFELDAAILFSDILTVPDAMGLGLYFAEGEGPKFTRPLQHERDIAALQVPD--MDRLQY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 123 VFDAVASIRKALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRTVKTMMYSRPDLLHKILD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+ YL AQI AG +QIFDT G L + F+ ++ R + +I+ ++R+
Sbjct: 183 VNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFQEFSLRYMRQIVGGLKRENEGRRV 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I FAKG G L+ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 243 PVIIFAKGGGLWLEQMADI-GADALGLDWTCNIGEARRRVGDKVALQGNFDPFALFGTPE 301
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGI+ +P++ LV +V
Sbjct: 302 SIKTEVARILAGFGNGSGHVFNLGHGISQHTNPEHAGILVDSVHELS 348
>gi|325579265|ref|ZP_08149221.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae ATCC
33392]
gi|325159500|gb|EGC71634.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae ATCC
33392]
Length = 371
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 18 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNVDLACEVT 77
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F EGP+ + + N I
Sbjct: 78 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIENKSTVENLPIPDPEGE 137
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 138 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFNKIKKMMYAEPQTLHL 197
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD ++D YL AQI AG + +FDT G LG E+ +++ + + +I+ + R++
Sbjct: 198 LLDKVADSVILYLNAQIKAGAQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIREHDG 257
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 258 RKVPVTLFTKGGGLWLEAMAN-TGCDALGLDWTVNLADAKARVGNKVALQGNMDPSVLYA 316
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V V +
Sbjct: 317 PAERIEQEVRSILADFGQGSGHVFNLGHGIHQDVPESAPKIFVDAIHEFS 366
>gi|313668740|ref|YP_004049024.1| uroporphyrinogen decarboxylase [Neisseria lactamica ST-640]
gi|313006202|emb|CBN87664.1| putative uroporphyrinogen decarboxylase [Neisseria lactamica
020-06]
Length = 354
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 187/348 (53%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L
Sbjct: 63 PLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L
Sbjct: 242 VPIIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPSALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G G +FNLGHGI DP++ LV TV
Sbjct: 301 ESIRTEAARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|259906945|ref|YP_002647301.1| uroporphyrinogen decarboxylase [Erwinia pyrifoliae Ep1/96]
gi|224962567|emb|CAX54022.1| Uroporphyrinogen decarboxylase [Erwinia pyrifoliae Ep1/96]
Length = 355
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 180 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDMADARRRVGDRVALQGNMDPSMLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ V IL G G +FNLGHGI V P++ V+ V
Sbjct: 299 ASPARIVQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 346
>gi|45476838|sp|Q7NZ00|DCUP_CHRVO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 120/348 (34%), Positives = 181/348 (52%), Gaps = 9/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L + PIW+MRQAGRYLPEYR R + +F+ +C +P+Y E+T
Sbjct: 1 MTQLKNDTFLRALLKEPVEYTPIWMMRQAGRYLPEYRATRARAGSFMGLCTSPDYATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL + DA+G + F E EGP+ P+ + D +
Sbjct: 61 LQPLDRFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQRPLRDEAAIRALAPAD--MG 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F +++ +RK L + LIGF G+P+T+A YM+ GG D + Y +
Sbjct: 119 KLQYVFDAVASIRKALDGRVPLIGFSGSPFTLACYMVEGGGSDDFRHVKAMLYSRPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + YL AQI AG +QIFDT G L + ++ + RI++ ++R+
Sbjct: 179 HILEANTQSVIAYLNAQIDAGAQAVQIFDTWGGALSHAAYREFSLAYMQRIVAGLKREAD 238
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L++ + ++ +GLDW+ + A + + +QGN DP L
Sbjct: 239 GRRVPVIVFTKGGGQWLEDIAAI-GADCVGLDWTTDIGQARARVGAKVALQGNFDPNALF 297
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL G G +FNLGHGI+ DP + LV+ V
Sbjct: 298 AEPAAIEREVERILQSYGQGSGHVFNLGHGISQFADPAHAGALVEAVH 345
>gi|15676679|ref|NP_273823.1| uroporphyrinogen decarboxylase [Neisseria meningitidis MC58]
gi|23814024|sp|Q9K041|DCUP_NEIMB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7226013|gb|AAF41194.1| uroporphyrinogen decarboxylase [Neisseria meningitidis MC58]
gi|316983769|gb|EFV62750.1| uroporphyrinogen decarboxylase [Neisseria meningitidis H44/76]
gi|325133705|gb|EGC56361.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M13399]
gi|325140065|gb|EGC62594.1| uroporphyrinogen decarboxylase [Neisseria meningitidis CU385]
gi|325144181|gb|EGC66488.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240013]
gi|325200533|gb|ADY95988.1| uroporphyrinogen decarboxylase [Neisseria meningitidis H44/76]
gi|325206377|gb|ADZ01830.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M04-240196]
Length = 354
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 188/348 (54%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L
Sbjct: 63 PLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L
Sbjct: 242 VPVIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI DP++ LV TV
Sbjct: 301 ESIRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|294649884|ref|ZP_06727284.1| uroporphyrinogen decarboxylase [Acinetobacter haemolyticus ATCC
19194]
gi|292824258|gb|EFF83061.1| uroporphyrinogen decarboxylase [Acinetobacter haemolyticus ATCC
19194]
Length = 357
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 132/353 (37%), Positives = 184/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAEAGDFLSLCKNTDFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y +
Sbjct: 121 LAYVMNAVSTIRSALNGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL A ++ +QGNLDP L
Sbjct: 241 KRIPIIVFTKGGGQWLETML-TTGADAFGLDWTTPLYTARDVVAGRAALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD +I NLGHGIT VDP V TV
Sbjct: 300 SAASIEKSVKAMLDDAYQNGEKTGYIANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|241760005|ref|ZP_04758103.1| uroporphyrinogen decarboxylase [Neisseria flavescens SK114]
gi|241319459|gb|EER55889.1| uroporphyrinogen decarboxylase [Neisseria flavescens SK114]
Length = 353
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 189/350 (54%), Gaps = 7/350 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T
Sbjct: 1 MTALKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL + DA+G + F E EGP+ + E+ + + +
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERTLQHEVDIAKLQVP-DMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 120 LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 180 ILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L
Sbjct: 240 RRVPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 299 TPESIRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|325127889|gb|EGC50793.1| uroporphyrinogen decarboxylase [Neisseria meningitidis N1568]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRAEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|261378810|ref|ZP_05983383.1| uroporphyrinogen decarboxylase [Neisseria cinerea ATCC 14685]
gi|269144790|gb|EEZ71208.1| uroporphyrinogen decarboxylase [Neisseria cinerea ATCC 14685]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPEF 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADFGQGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|161869724|ref|YP_001598891.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 053442]
gi|189083012|sp|A9M3L2|DCUP_NEIM0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161595277|gb|ABX72937.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 053442]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|184158888|ref|YP_001847227.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ACICU]
gi|332875749|ref|ZP_08443549.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6014059]
gi|238058010|sp|B2HVF8|DCUP_ACIBC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|183210482|gb|ACC57880.1| Uroporphyrinogen-III decarboxylase [Acinetobacter baumannii ACICU]
gi|322508866|gb|ADX04320.1| hemE [Acinetobacter baumannii 1656-2]
gi|323518860|gb|ADX93241.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii
TCDC-AB0715]
gi|332736073|gb|EGJ67100.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii 6014059]
Length = 357
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ + ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMIA-SGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|283476739|emb|CAY72574.1| uroporphyrinogen decarboxylase [Erwinia pyrifoliae DSM 12163]
Length = 356
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSCPVTCRADVEKLPIPDPE-Q 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + +
Sbjct: 181 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLHYMHKIVDGLLHENE 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+ ++ A + +QGN+DP L
Sbjct: 241 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWTTDMADARRRVGDRVALQGNMDPSMLY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ V IL G G +FNLGHGI V P++ V+ V
Sbjct: 300 ASPARIVQEVAGILAGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 347
>gi|218767900|ref|YP_002342412.1| uroporphyrinogen decarboxylase [Neisseria meningitidis Z2491]
gi|23814021|sp|Q9JV52|DCUP_NEIMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121051908|emb|CAM08214.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
Z2491]
gi|319410147|emb|CBY90483.1| uroporphyrinogen decarboxylase (URO-D; UPD) [Neisseria meningitidis
WUE 2594]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|301155514|emb|CBW14981.1| uroporphyrinogen decarboxylase [Haemophilus parainfluenzae T3T1]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 122/351 (34%), Positives = 186/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNSDLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ PI + P D
Sbjct: 61 LQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFAHPIENKSAVENLPIPDPE-G 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKTFNKIKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++D YL AQI AG + +FDT G LG E+ +++ + + +I+ + R++
Sbjct: 180 LLLDKVADSVILYLNAQIKAGAQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIREHD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLEAMAN-TGCDALGLDWTVNLADAKARVGHKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V V +
Sbjct: 299 APAERIEQEVRSILADFGQGSGHVFNLGHGIHQDVPESAPKIFVDAIHEFS 349
>gi|226952588|ref|ZP_03823052.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ATCC 27244]
gi|226836668|gb|EEH69051.1| uroporphyrinogen decarboxylase [Acinetobacter sp. ATCC 27244]
Length = 357
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 132/353 (37%), Positives = 184/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ P+W+MRQAGRYLPEYR+ R + +FL +C ++ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPVWMMRQAGRYLPEYRETRAEAGDFLSLCKNTDFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DALG + F EGP+ E + N +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKSD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YMI GG K+ + Y +
Sbjct: 121 LAYVMNAVSTIRSALNGQVPLIGFSGSPWTLATYMIEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMTKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A GLDW+ PL A ++ +QGNLDP L
Sbjct: 241 RRIPIIVFTKGGGQWLETML-TTGADAFGLDWTTPLYTARDVVAGRAALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD +I NLGHGIT VDP V TV
Sbjct: 300 SAASIEKSVKAMLDDAYQNGEKTGYIANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|110635804|ref|YP_676012.1| uroporphyrinogen decarboxylase [Mesorhizobium sp. BNC1]
gi|123161643|sp|Q11CM8|DCUP_MESSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110286788|gb|ABG64847.1| uroporphyrinogen decarboxylase [Chelativorans sp. BNC1]
Length = 342
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 190/346 (54%), Positives = 235/346 (67%), Gaps = 4/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ERK +LE L G + PPPIWLMRQAGRYLPEYR+ RKK +FLD+CY PE VE+TL
Sbjct: 1 MAERK--LLEALNGRTVFPPPIWLMRQAGRYLPEYRETRKKAGSFLDLCYNPELAVEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILVI ALGR++RF E GP M PI EI L+PN L N L
Sbjct: 59 QPIRRFGFDAAILFSDILVIPHALGRDLRFEEGAGPLMSPIQANEIPGLDPN--LIHNRL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ LR +L LIGFCGAPWTVA+YMI+G D R+F Y++ + F+ L
Sbjct: 117 QPVYETVRRLRSELSEETALIGFCGAPWTVATYMIAGRGTPDQAPARLFGYRHPKEFSEL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD +S SA+YLI QI G D +QIFD+ AG L E F+ + R V I+ VR ++PN
Sbjct: 177 LDTISAASADYLIRQIDEGADAVQIFDSWAGILDETSFDQWCLRPVAEIVRRVRERHPNV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F KGAG++ YR+ T A+GLDW+VPLS A LQ EGPVQGNLDPMRLV G Q
Sbjct: 237 PIIGFPKGAGWLYSRYRQQTGVTALGLDWTVPLSEASRLQAEGPVQGNLDPMRLVAGGQA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ GV IL LG PFIFNLGHGITP+ +V +++ VR ++
Sbjct: 297 LSKGVEDILSALGGAPFIFNLGHGITPETPIGHVEAMIQQVREGRL 342
>gi|254669887|emb|CBA04381.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha153]
Length = 354
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|197293338|gb|ACH58231.1| uroporphyrinogen decarboxylase [Haemophilus sp. CCUG 30218]
Length = 354
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 186/346 (53%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLRESVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY+ DAAILFSDIL I DA+G + F EGP+ + + N I L +
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIECKSAVENLPIPDPEEELQYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R +L I LIGF G+PWT+A+YM+ GG K G+ + Y +S+ + LLD
Sbjct: 125 MNAVRTIRGELKGEIPLIGFSGSPWTLATYMVEGGSSKTFGKIKKMMYSDSKTLHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D YL AQI AG + IFDT G LG E+ +++ + + +I+ + R+
Sbjct: 185 LADSITLYLNAQIKAGAQAVMIFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGRRVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
F KG G L+ T +AIGLDW+V L+ A + + +QGN+DP L ++
Sbjct: 245 VTLFTKGGGLWLEAIAN-TGCDAIGLDWTVNLADAKARVGHKVALQGNMDPSVLYASSER 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G+G +FNLGHGI V V V
Sbjct: 304 IEQEVQSILADFGTGSGHVFNLGHGIHQDVPENAPKVFVDAVHHYS 349
>gi|329118122|ref|ZP_08246834.1| uroporphyrinogen decarboxylase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465782|gb|EGF12055.1| uroporphyrinogen decarboxylase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 353
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 184/347 (53%), Gaps = 8/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAQAGSFLDLCKNTELATEVTVQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R++ DAAILFSDIL + DA+G + F E EGP+ + P+ + D + L
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLQNEADIAKLQVPD--MARLQY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++S +R+ L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 123 VFDAVSSIRRTLNGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKILD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+ YL AQI AG +QIFDT G L + FE ++ R + +I+S ++R+
Sbjct: 183 VNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFEEFSLRYMKQIVSGLKRESEGRRV 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I FAKG G L+ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 243 PVILFAKGGGLWLEKMAD-AGADALGLDWTCNIGEARRRVGGKMALQGNFDPFALFGTPE 301
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL GSG +FNLGHGI+ DP++ LV V
Sbjct: 302 AIRAEAGRILADYGSGSGHVFNLGHGISQFADPEHAKILVDAVHELS 348
>gi|301511180|ref|ZP_07236417.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii AB058]
Length = 357
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 134/353 (37%), Positives = 185/353 (52%), Gaps = 9/353 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L L ++ PIW+MRQAGRYLPEYR+ R K +FL +C E+ E+T
Sbjct: 1 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY+ DAAILFSDIL I DALG + F EGP+ E + N
Sbjct: 61 LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y +
Sbjct: 121 LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D +YL AQI AG IQIFD+ G L E+ ++ + +II+ ++R+
Sbjct: 181 LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+GLDW+ PL+ A + +QGNLDP L
Sbjct: 241 RRIPVIVFTKGGGQWLEPMI-TTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYG 299
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD ++ NLGHGIT VDP V TV
Sbjct: 300 SAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYS 352
>gi|255065155|ref|ZP_05317010.1| uroporphyrinogen decarboxylase [Neisseria sicca ATCC 29256]
gi|255050576|gb|EET46040.1| uroporphyrinogen decarboxylase [Neisseria sicca ATCC 29256]
Length = 353
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + + L
Sbjct: 63 PLDRFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F ++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVGSIRKALDGCVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L+ + ++A+GLDW+ + A + + +QGN DP L
Sbjct: 242 VPVIVFAKGGGLWLEGMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 301 ESIRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|258543861|ref|ZP_05704095.1| uroporphyrinogen decarboxylase [Cardiobacterium hominis ATCC 15826]
gi|258520901|gb|EEV89760.1| uroporphyrinogen decarboxylase [Cardiobacterium hominis ATCC 15826]
Length = 349
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 133/345 (38%), Positives = 194/345 (56%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L VL+G + P+W+MRQAGRYLPEYR R+ F+ +C TPE E+TLQP+
Sbjct: 2 KNDLLLRVLRGEPVPRTPVWMMRQAGRYLPEYRATREAAGQFMTLCQTPELACEVTLQPL 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL I DA+G + FV EGP D P+ + P D+ + L
Sbjct: 62 ARFRLDAAILFSDILTIPDAMGLGLSFVPGEGPAFDRPVRSHADVQALPIPDMH-DDLGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q++ ++R++L + LIGF G+PWT+A+YMI G +D + YQ R + LLD
Sbjct: 121 VMQAVRLIRRELDGSVPLIGFAGSPWTLATYMIEGQASRDFAAAKTLLYQEPRTLHLLLD 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YL+AQI AG + +FD+ G L + Y+ + RII+ + K A
Sbjct: 181 KLARAVTAYLLAQIEAGAQAVMLFDSWGGSLAWQAYREYSLAYMQRIITGIGDK---APV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F KG G L + + + + A+GLDW+ PL+ A L + +QGNLDP L ++
Sbjct: 238 ILFTKGGGNWL-DMMKDSGAAAVGLDWTTPLASARSILGENIALQGNLDPAILRASPDII 296
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G G IFNLGHGITP + P++ +++ V
Sbjct: 297 ENEVRRVLADYGHGHRHIFNLGHGITPDIPPEHAAAMIEAVHKHS 341
>gi|209551505|ref|YP_002283422.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537261|gb|ACI57196.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 340
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 204/338 (60%), Positives = 259/338 (76%), Gaps = 2/338 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL+G ++PPP+WLMRQAGRYLPEYRQ R K +FLD+CYTP++ VE+TLQPIRRY F
Sbjct: 1 MRVLEGESLSPPPLWLMRQAGRYLPEYRQTRAKAGSFLDLCYTPDHAVEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL P+ +++
Sbjct: 61 DAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLN--GEEVVDYLRPVLETVR 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY++ RAF LL L+DVS
Sbjct: 119 RLRQELPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKHPRAFEQLLMLLADVS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P A+ I+FAKG
Sbjct: 179 ADYLVAQIDAGADAVQIFDSWAGVLGEREFEAFAIRPVARMIASVKSRRPQARIIAFAKG 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
AGY LKNYR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ I
Sbjct: 239 AGYQLKNYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
L LG GP IFNLGHGITPQ DP++V LV VR ++
Sbjct: 299 LQHLGQGPLIFNLGHGITPQADPEHVRLLVDRVRGGQM 336
>gi|312170810|emb|CBX79071.1| uroporphyrinogen decarboxylase [Erwinia amylovora ATCC BAA-2158]
Length = 356
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 2 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAVAGDFMSLCKNAELACEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D
Sbjct: 62 LQPLRRYALDAAILFSDILTIPDAMGLGLYFETGEGPRFSSPVTCRADVEKLPIPDPE-Q 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 121 ELGYVMNAVRTIRKNLNGEVPLIGFSGSPWTLATYMVEGGSSKAFTRLKKMMYAEPQTLH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 181 LMLDKLADSVTLYLNAQIRAGAQSVMIFDTWGGVLTGRDYLEFSLNYMHKIVDGLLREND 240
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW ++ A + +QGN+DP L
Sbjct: 241 GRRVPVTLFTKGGGQWLEAMA-TTGCDALGLDWITDMADARRRVGDRVALQGNMDPSMLY 299
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V IL+ G G +FNLGHGI V P++ V+ V
Sbjct: 300 ASPARIEQEVAGILEGYGHGNGHVFNLGHGIHLDVPPEHAGVFVEAVH 347
>gi|225075723|ref|ZP_03718922.1| hypothetical protein NEIFLAOT_00739 [Neisseria flavescens
NRL30031/H210]
gi|224952994|gb|EEG34203.1| hypothetical protein NEIFLAOT_00739 [Neisseria flavescens
NRL30031/H210]
Length = 353
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 188/350 (53%), Gaps = 7/350 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T
Sbjct: 1 MTALKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + +
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 120 LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFCTIKTMMYSRPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 180 ILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L
Sbjct: 240 RRVPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGKARRRVGEQVALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 299 TPESIRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|224826220|ref|ZP_03699322.1| uroporphyrinogen decarboxylase [Lutiella nitroferrum 2002]
gi|224601321|gb|EEG07502.1| uroporphyrinogen decarboxylase [Lutiella nitroferrum 2002]
Length = 355
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 189/352 (53%), Gaps = 9/352 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEYR R + +F+ +C +PE+ E+T
Sbjct: 1 MTTLKNDTFLRALLKEPVEYTPIWMMRQAGRYLPEYRATRARAGSFMGLCTSPEFATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+ R+ DAAILFSDIL + DA+G + F E EGP+ P+ + + +
Sbjct: 61 LQPLERFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQHPLRDE--AAIKALSVAPME 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F +++ +RK L + LIGF G+P+T+A YMI GG D + Y +
Sbjct: 119 KLQYVFDAVASIRKALDGRVPLIGFSGSPFTLACYMIEGGGSDDFRNVKAMLYSRPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + +YL AQI AG +QIFDT G L ++ ++ + +II+ ++R+
Sbjct: 179 HILDINARTVTDYLNAQIDAGAQAVQIFDTWGGALTHAAYKTFSLAYMQKIIAGLKREAD 238
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
I F KG G L++ + ++AIGLDW+ ++ A + + +QGNLDP L
Sbjct: 239 GRRVPVIVFTKGGGQWLEDIATI-GADAIGLDWTTDIADARRRVGADVALQGNLDPNVLF 297
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V+ IL G G +FNLGHGI+ V+P + LV+ V +
Sbjct: 298 ASPEGIEKEVSRILSSYGQGSGHVFNLGHGISQFVNPDHAAVLVEAVHRLSV 349
>gi|121634575|ref|YP_974820.1| uroporphyrinogen decarboxylase [Neisseria meningitidis FAM18]
gi|166234262|sp|A1KT40|DCUP_NEIMF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120866281|emb|CAM10022.1| putative uroporphyrinogen decarboxylase [Neisseria meningitidis
FAM18]
Length = 354
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRAEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|193213554|ref|YP_001999507.1| uroporphyrinogen decarboxylase [Chlorobaculum parvum NCIB 8327]
gi|238058014|sp|B3QL69|DCUP_CHLP8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193087031|gb|ACF12307.1| uroporphyrinogen decarboxylase [Chlorobaculum parvum NCIB 8327]
Length = 351
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 201/350 (57%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQSTPRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELACEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEI--YLLNPNIDLFLNYL 120
DAAI+FSDILV+ +A+G +V+ +E++G ++ P I +Q L++P+++ L Y
Sbjct: 62 DLMGVDAAIIFSDILVVNEAMGMDVQIIESKGIKLTPEIRSQADIDKLIDPDVEEKLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F +I + +K+L + + LIGF GA WT+ +Y + GG K++ + Y+ + + L
Sbjct: 121 --VFDAIRLTKKELNDRVPLIGFSGAAWTLFTYAVEGGGSKNYANAKKMMYREPQMAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++ + YLI Q+ AG D IQIFD+ A L E ++ +A + + ++AV+ YP
Sbjct: 179 LQKITTCISNYLIKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I FAK +L + T ++A+GL W++ ++ A EL +QGN+DP L +
Sbjct: 239 PVIVFAKDMNTILSDVAD-TGADAVGLGWNIDIAKARKELNDRVCLQGNMDPTVLYGTPE 297
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 298 KIKSEAAKILKQFGQHTDCSGHVFNLGHGILPDVDPANLKCLVEFVKEES 347
>gi|304387910|ref|ZP_07370083.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ATCC 13091]
gi|304338007|gb|EFM04144.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ATCC 13091]
Length = 354
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ G K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVESGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|325142014|gb|EGC64446.1| uroporphyrinogen decarboxylase [Neisseria meningitidis 961-5945]
gi|325198000|gb|ADY93456.1| uroporphyrinogen decarboxylase [Neisseria meningitidis G2136]
Length = 354
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|254672848|emb|CBA07056.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha275]
Length = 354
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEDDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEAARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|238899280|ref|YP_002924963.1| uroporphyrinogen decarboxylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259645151|sp|C4K8F9|DCUP_HAMD5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229467041|gb|ACQ68815.1| uroporphyrinogen decarboxylase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 356
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 123/344 (35%), Positives = 176/344 (51%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L ++ P+W+MRQAGRYLPEY++IR + +F+ +C + E+TLQP+
Sbjct: 5 KNDAYIRALLRESVDITPVWMMRQAGRYLPEYKKIRAQAGDFMSLCKNTQLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDIL I DA+G + F EGP+ PI + P D L
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLYFTTGEGPKFHFPIRMKADIEKLPIPDPE-KELRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +RK+L + LIGF G+PWT+A+YM+ GG K + + Y + LL+
Sbjct: 124 VMDLARTVRKELAGTVPLIGFAGSPWTIATYMVEGGSSKIFSRLKAMLYTEPATLHLLLN 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL AQI AGV I IFDT G L + ++ + +II + R+
Sbjct: 184 KLTQTVILYLNAQIQAGVQSIMIFDTWGGVLSGENYRIFSLNYMHQIIEGLTRENEGCKI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +AIGLDW+ + A + + +QGN+DP L
Sbjct: 244 PVTLFTKGGGQWLEAIAE-TGCDAIGLDWTTDIGEARHRVGDKVALQGNMDPAVLYAPAP 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ V +IL G G IFNLGHG+ P++V V V
Sbjct: 303 IIEKEVASILGAFGKGTGHIFNLGHGVHQDTPPEHVRIFVDAVH 346
>gi|261392852|emb|CAX50433.1| uroporphyrinogen decarboxylase (URO-D; UPD) [Neisseria meningitidis
8013]
Length = 354
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRAMQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|85058116|ref|YP_453818.1| uroporphyrinogen decarboxylase [Sodalis glossinidius str.
'morsitans']
gi|123520305|sp|Q2NWR2|DCUP_SODGM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84778636|dbj|BAE73413.1| uroporphyrinogen decarboxylase [Sodalis glossinidius str.
'morsitans']
Length = 354
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 120/348 (34%), Positives = 179/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RR+ DA ILFSDIL + DA+G + F + EGPR PI + P D
Sbjct: 61 LQPLRRFPLDATILFSDILTVPDAMGLGLWFEQGEGPRFARPIQHRRDVEQLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 120 ELGYVMNAVRAIRQRLQGAVPLIGFSGSPWTLATYMVEGGSSKAFTKIKQMLYAEPETLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL QI AG + +FDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVVLYLNGQIRAGAQAVMLFDTWGGALTGADYREFSMHYMHKIVDGLLREQD 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDWS ++ A + + +QGN+DP L
Sbjct: 240 GRRVPVTLFTKGGGQWLEAMAA-TGCDALGLDWSTDIADARRRVGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V ILD G G +FNLGHGI V P + V V
Sbjct: 299 GSPARIEREVATILDAFGPGEGHVFNLGHGIHQDVPPAHAGHFVAAVH 346
>gi|307543678|ref|YP_003896157.1| uroporphyrinogen decarboxylase [Halomonas elongata DSM 2581]
gi|307215702|emb|CBV40972.1| uroporphyrinogen decarboxylase [Halomonas elongata DSM 2581]
Length = 358
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 131/350 (37%), Positives = 191/350 (54%), Gaps = 7/350 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++L L ++ P+W+MRQAGRYLPEYR++R + +F+D+C + E+TL
Sbjct: 5 MELENDRLLRALARQPVDRTPVWMMRQAGRYLPEYREVRAQAGSFMDLCRDRDRACEVTL 64
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+ RY DAAILFSDIL I DA+G + F EGP+ P+ T E D +
Sbjct: 65 QPLERYPLDAAILFSDILTIPDAMGLGLYFETGEGPKFRKPVRTPEAVEALSVPDAERD- 123
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++ +R++L + LIGF G+PWT+A+YM+ G KD + Y +
Sbjct: 124 LDYVMNAVATIRRELNGRVPLIGFSGSPWTLATYMVEGASSKDFRHVKAMLYDTPDTMHR 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ +YL AQI AG V+QIFDT G L +E ++ R + +I+ + R+
Sbjct: 184 LLDLLARAVTDYLNAQIRAGAQVVQIFDTWGGALSTPAYEAFSLRYMKQIVDGLIREREG 243
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F K G L+ + ++A+GLDWS LS A + + +QGNLDP L
Sbjct: 244 RRVPVILFTKNGGQWLEAQAD-SGADALGLDWSTELSGARARVGQRVALQGNLDPNVLFA 302
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + D V IL GSGP +FNLGHGI+ DP+ V V+ +
Sbjct: 303 HPRAIRDEVARILASYGSGPGHVFNLGHGISQFTDPERVTAFVEALHELS 352
>gi|325265966|ref|ZP_08132652.1| uroporphyrinogen decarboxylase [Kingella denitrificans ATCC 33394]
gi|324982604|gb|EGC18230.1| uroporphyrinogen decarboxylase [Kingella denitrificans ATCC 33394]
Length = 354
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 178/347 (51%), Gaps = 8/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEYR+ R + F+D+C E E+TLQPI
Sbjct: 5 KNDTFLRALLRQPVEYTPIWMMRQAGRYLPEYRETRARAGGFMDLCKNTELATEVTLQPI 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RY+ DAAILFSDIL + DA+G + F EGP+ P+ T+ D +N L
Sbjct: 65 DRYDLDAAILFSDILTVPDAMGLGLYFEAGEGPKFQKPVQTEADVAALRVPD--MNDLRY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 123 VFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILH 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+ +YL QI G +QIFDT G L F+ ++ + +II + R++
Sbjct: 183 VNAQAVTQYLNTQIEQGAQAVQIFDTWGGVLSHAAFQEFSLAYIKQIIGGLIREHDGRRV 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I FAKG G L+ ++A+GLDW+ ++ A + + +QGN DP L
Sbjct: 243 PVIVFAKGGGQWLELMAE-CGADALGLDWTTDIAQARARVGGKVALQGNFDPFALFGTPG 301
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G G +FNLGHGI DP++ L+ V
Sbjct: 302 RIREEAAQILAGFGKGSGHVFNLGHGINQHTDPEHAKVLIDAVHELS 348
>gi|255021651|ref|ZP_05293693.1| Uroporphyrinogen III decarboxylase [Acidithiobacillus caldus ATCC
51756]
gi|254968911|gb|EET26431.1| Uroporphyrinogen III decarboxylase [Acidithiobacillus caldus ATCC
51756]
Length = 353
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 133/347 (38%), Positives = 189/347 (54%), Gaps = 8/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + PIWLMRQAGRYLPEYR R + K+FL +C TPE E+TLQP++
Sbjct: 8 NDRFLRACLCQPVEQIPIWLMRQAGRYLPEYRATRARAKDFLTLCSTPELACEVTLQPVQ 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I A+G +++F++ EGP P+ + P D L +
Sbjct: 68 RFPLDAAILFSDILTIPHAMGMDLQFLDGEGPVFSSPLRDTKAIRALPVPDPETE-LRYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R +L I LIGF G+PWT+A YMI G +D + Y + LLD
Sbjct: 127 MDAVRLIRHELAGRIPLIGFAGSPWTLACYMIEGRGSRDFQHIKAMLYSDPELLEQLLDT 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN---A 240
L A+YL AQI AG + +FD+ G L + ++ + + RIISA+ R +
Sbjct: 187 LVRAVAQYLNAQIRAGAQAVMLFDSWGGALTSAAYRRFSLKPMTRIISALERTGSDGQKV 246
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ + ++ +GLDW+V + A L +QGNLDPM L +
Sbjct: 247 PVILFTKGGGNWLEAMAD-SGADVLGLDWTVDMGEARRRLGPALALQGNLDPMALYGSPE 305
Query: 300 VMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+++ AIL+ G IFNLGHGITPQ + V LV+TV + +
Sbjct: 306 LLVQETQAILESHGPQAGHIFNLGHGITPQTPVEQVARLVETVHNWR 352
>gi|32034577|ref|ZP_00134733.1| COG0407: Uroporphyrinogen-III decarboxylase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 354
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 186/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MTQLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMALCRNADLAWEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL + DA+G + F EGP+ + + N I +
Sbjct: 61 LQPLRRYALDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPIENKAQVDNLPIPDPESE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + +
Sbjct: 121 LQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYADPKILHA 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D YL AQI AG + +FDT G L +E++ ++ R + +I+ + R+
Sbjct: 181 LLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHNEYKEFSLRYMHKIVDGLIRENEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRVGHKVALQGNMDPSVLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI V ++ V V
Sbjct: 300 QPERIELEVKQILAGFGQGSGHVFNLGHGIHQDVPEQSPKVFVDAVHEYS 349
>gi|52424238|ref|YP_087375.1| HemE protein [Mannheimia succiniciproducens MBEL55E]
gi|81691508|sp|Q65W70|DCUP_MANSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|52306290|gb|AAU36790.1| HemE protein [Mannheimia succiniciproducens MBEL55E]
Length = 354
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 188/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MTTLKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL I DA+G + F EGP+ D PI T+ P D
Sbjct: 61 LQPLRRYELDAAILFSDILTIPDAMGLGLTFGAGEGPKFDRPIETKSAVENLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELQYVMNAVRTIRRELNGEVPLIGFSGSPWTLATYMVEGGSTKAFTKIKKMMYAEPKLLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++D YL AQI AG + IFDT G LG E+ +++ + + +I++ + R+
Sbjct: 180 KLLDKVADSVVLYLNAQIKAGAQAVMIFDTWGGVLGHREYLDFSLQYMHKIVNGLIREND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L T +AIGLDW+V L+ A ++ + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLDAIAD-TGCDAIGLDWTVNLAQAKAQVGHKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +IL G G +FNLGHGI V ++ V +
Sbjct: 299 AAPERIEQEVRSILADFGEGSGHVFNLGHGIHQDVPVESPKVFVDAIHQYS 349
>gi|218516998|ref|ZP_03513838.1| uroporphyrinogen decarboxylase [Rhizobium etli 8C-3]
Length = 338
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 203/340 (59%), Positives = 258/340 (75%), Gaps = 2/340 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ ++KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TL
Sbjct: 1 MSDTRRKIMRVLDGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + + YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIARLN--GEEVVAYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR+ LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ RAF L
Sbjct: 119 RPVLETVRRLREALPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYKYPRAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVSA+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++++ + P+A
Sbjct: 179 LMLLADVSADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFALRPVARMIASIKSQRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G +
Sbjct: 239 RIIAFAKGAGYQLKAYRQKTGADAIGLDWSVPLTFAAELQKDGPVQGNLDPMRVVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ +G++ IL LG GP IFNLGHGITPQ DP +V LV+
Sbjct: 299 LEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVER 338
>gi|86141060|ref|ZP_01059619.1| uroporphyrinogen decarboxylase [Leeuwenhoekiella blandensis MED217]
gi|85833002|gb|EAQ51451.1| uroporphyrinogen decarboxylase [Leeuwenhoekiella blandensis MED217]
Length = 343
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 193/346 (55%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLPE+++I+ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVERPPVWMMRQAGRYLPEFQEIKAKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ +V GP + DPI + + ++ P+I+ L Y
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIHVEMKPGIGPWLPDPIRSHKDLERVIVPDINDTLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + ++KL + I LIGF G+PWT+ Y + G K+ + F + A + L
Sbjct: 121 --VMDAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDIAKEFCFTQPEAAHAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 179 LQKITDTTILYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKEE---I 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 236 PVIAFGKGCWFALGEMAK-SGASALGVDWTCSPRNARYLTGGNITLQGNFDPTRLFSPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G +I NLGHGI P + +N ++ V+ K
Sbjct: 295 EIKRMVTEMINAFGKDKYIVNLGHGILPNIPLENAGAFIEAVKEYK 340
>gi|319638045|ref|ZP_07992809.1| uroporphyrinogen decarboxylase [Neisseria mucosa C102]
gi|317400690|gb|EFV81347.1| uroporphyrinogen decarboxylase [Neisseria mucosa C102]
Length = 353
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 188/350 (53%), Gaps = 7/350 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T
Sbjct: 1 MTALKNDTFLRALLKQPVKYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + +
Sbjct: 61 IQPLDRFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 120 LQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 180 ILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L
Sbjct: 240 RRVPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI DP++ LV TV
Sbjct: 299 TPESIRTEVARILADYGNGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|121997849|ref|YP_001002636.1| uroporphyrinogen decarboxylase [Halorhodospira halophila SL1]
gi|171769506|sp|A1WVX2|DCUP_HALHL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121589254|gb|ABM61834.1| uroporphyrinogen decarboxylase [Halorhodospira halophila SL1]
Length = 364
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 182/346 (52%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL Q ++ P+W+MRQAGRYL EYR++R + +F+ +C +PE +T+QP+
Sbjct: 7 KNDRILRAFQRQPVDRTPVWMMRQAGRYLAEYREVRAQAGSFMGLCRSPELAARVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I +A+G + FV EGP + + L +
Sbjct: 67 ERYELDAAILFSDILTIPEAMGLGLNFVTGEGPVFEHRVKTAADIDRLPQPSAQKELRYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ RK+L + LIGF G+PWT+A+YMI GG K ++ + A + L+
Sbjct: 127 MDAVAACRKELNGQVPLIGFTGSPWTLATYMIEGGSSKTFAASKSLLFNEPEAAHRLMAK 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D A+YL Q+ AG + IFDT G L + ++ + RI+ + R+
Sbjct: 187 LADTVADYLNGQVEAGAQALMIFDTWGGALDPVRYREFSLAYMQRILEQLPREREGRRIP 246
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
F KG G L++ T + +GLDW+ L+ A + +QGNLDP L +V
Sbjct: 247 VTLFTKGGGQWLEDIAD-TGCDGVGLDWTTSLADARRRIGGRVALQGNLDPCMLHANPEV 305
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V L+ G GP +FNLGHGI P+ P+NV +++ +
Sbjct: 306 IRREVARCLEEFGHGPGHVFNLGHGIQPETPPENVDAMIRALHELS 351
>gi|145220438|ref|YP_001131147.1| uroporphyrinogen decarboxylase [Prosthecochloris vibrioformis DSM
265]
gi|189083013|sp|A4SGN6|DCUP_PROVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145206602|gb|ABP37645.1| uroporphyrinogen decarboxylase [Chlorobium phaeovibrioides DSM 265]
Length = 351
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 195/347 (56%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAIREKT-DFLTLCKTPELAAEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G +V +E +G ++ P ++ + ++ + L +
Sbjct: 62 ELMGVDAAIIFSDILVVNEAMGMDVEIIETKGIKLSPPIRSQVDIDRLSVPDVHDKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + +++ + + LL
Sbjct: 122 LDAIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMFRDPKMAHMLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V ++Y+ AQ+ AG D IQIFD+ A L E ++ +A + + A++ KYP+ I
Sbjct: 182 ISSVISDYVCAQVEAGADAIQIFDSWASALSEDDYREFALPYIKENVQALKTKYPDIPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L++ T +A+GL W + ++ A L +QGN+DP L + +
Sbjct: 242 VFSKDCNTILEDIAA-TGCDAVGLGWGIDIAKARTILGDRVCLQGNMDPTVLYGTPEKIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 301 AEAGKILKQFGQHTANSGHVFNLGHGILPDVDPANLKLLVEFVKEES 347
>gi|332519548|ref|ZP_08396015.1| uroporphyrinogen decarboxylase [Lacinutrix algicola 5H-3-7-4]
gi|332045396|gb|EGI81589.1| uroporphyrinogen decarboxylase [Lacinutrix algicola 5H-3-7-4]
Length = 341
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 196/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVERPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RRY DAAILF DILVI A+ V+ N GP + +PI TQ+ + P++ L+Y
Sbjct: 62 RRYGMDAAILFCDILVIPQAMNIEVQMKPNFGPYLPNPIRTQKDVDNVIVPDVKESLSY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I + ++KL N I LIGF G+PWT+ Y + G K+ + + F ++N A + L
Sbjct: 121 --VYDAIKMTKEKLNNDIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFKNPVAAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 179 LQKITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWKYIQQIIDALKDE---T 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 236 PVIAFGKGCWFALGEMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPTRLFSPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 295 EIKKMVHQMINDFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|325137816|gb|EGC60391.1| uroporphyrinogen decarboxylase [Neisseria meningitidis ES14902]
Length = 354
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEAARILADYGQGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|261380377|ref|ZP_05984950.1| uroporphyrinogen decarboxylase [Neisseria subflava NJ9703]
gi|284796902|gb|EFC52249.1| uroporphyrinogen decarboxylase [Neisseria subflava NJ9703]
Length = 353
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 188/350 (53%), Gaps = 7/350 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEY+ R + +FLD+C E E+T
Sbjct: 1 MTALKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRARAGSFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + + +
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLQVP-DMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 120 LQYVFDAVTSIRKALGGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 180 ILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEG 239
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I FAKG G L++ + ++A+GLDW+ + A + ++ +QGN DP L
Sbjct: 240 RRVPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGEQVALQGNFDPFALFG 298
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI +P++ LV TV
Sbjct: 299 TPESIRTEVARILADYGNGSGHVFNLGHGINQHANPEHAKILVDTVHELS 348
>gi|86133876|ref|ZP_01052458.1| uroporphyrinogen decarboxylase [Polaribacter sp. MED152]
gi|85820739|gb|EAQ41886.1| uroporphyrinogen decarboxylase [Polaribacter sp. MED152]
Length = 342
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 194/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ V N GP + +PI +Q+ + P+I L Y
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIEVEMKPNFGPYLPNPIRSQKDLDSVIIPDIQDSLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I ++KL + I LIGF G+PWT+ Y + G K+ + + + N + L
Sbjct: 121 --VMDAIKATKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKELCFTNPIVAHTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +A
Sbjct: 179 LQKITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYMQQIIDALK---DDA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + + ++A+G+DW+ A L + +QGN DP RL
Sbjct: 236 PVIAFGKGCWFALSDMAK-SGASALGVDWTCSAKNARYLSGGQITLQGNFDPSRLFSSPS 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G +I NLGHGI P + +N V V+ K
Sbjct: 295 EIKKMVTQMINEFGKDKYIVNLGHGILPNIPVENAKAFVDAVKEYK 340
>gi|225023206|ref|ZP_03712398.1| hypothetical protein EIKCOROL_00058 [Eikenella corrodens ATCC
23834]
gi|224944030|gb|EEG25239.1| hypothetical protein EIKCOROL_00058 [Eikenella corrodens ATCC
23834]
Length = 351
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 185/351 (52%), Gaps = 9/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L ++ P+WLMRQAGRYLPEYR +R + FLD+C E E+T
Sbjct: 1 MTTLQNDTFLRTLAKQPVSHTPVWLMRQAGRYLPEYRAVRARAGGFLDLCKNTELATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QPI R+ DAAILFSDIL + DA+G + F E EGP+ P+ + D +
Sbjct: 61 VQPIDRFGLDAAILFSDILTVPDAMGLGLYFAEGEGPKFARPLQNEADIAALQVPD--MA 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F ++S +R+ L + LIGF G+P+T+A YM+ GG K+ Q + Y+ +
Sbjct: 119 KLRYVFDAVSSIRRALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRQIKALLYRRPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + YL QI AG +QIFDT G L + F ++ + +IIS + R++
Sbjct: 179 HILNITAQSVTAYLNEQIAAGAQAVQIFDTWGGLLSDAAFPEFSLAYMRQIISDLTREHE 238
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ + ++A+GLDW+V L A + + +QGN DP L
Sbjct: 239 GRRVPVILFTKGGGQWLELMAE-SGADALGLDWTVNLGQARQRVGGQVALQGNFDPAALF 297
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI+ DP+NV LV V
Sbjct: 298 GTPESVRAEVRRILHSYGEGSGHVFNLGHGISQHTDPENVKALVDAVHEYS 348
>gi|163787005|ref|ZP_02181452.1| uroporphyrinogen decarboxylase [Flavobacteriales bacterium ALC-1]
gi|159876893|gb|EDP70950.1| uroporphyrinogen decarboxylase [Flavobacteriales bacterium ALC-1]
Length = 341
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 197/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ V+ N GP + +P+ +Q+ + P++ LNY
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPVRSQKDVDNVIVPDVKEALNY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++Q+I ++KL + I LIGF G+PWT+ Y + G K+ + + F + N A + L
Sbjct: 121 --VYQAIKATKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTNPIAAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AG + +Q+FD+ G L +++ ++ + + +II A++ +A
Sbjct: 179 LQKITDTTIAYLKEKVKAGCNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALK---DDA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + ++A+G+DW+ A L +QGN DP RL
Sbjct: 236 PVIAFGKGCWFALNEMSK-SGASALGIDWTCSARNARYLTGGNITLQGNFDPTRLFSPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 295 EIKRMVHQMINEFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|149369454|ref|ZP_01889306.1| Uroporphyrinogen-III decarboxylase [unidentified eubacterium SCB49]
gi|149356881|gb|EDM45436.1| Uroporphyrinogen-III decarboxylase [unidentified eubacterium SCB49]
Length = 343
Score = 437 bits (1125), Expect = e-121, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 193/346 (55%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE+ +I+ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKAKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ +V GP + +PI T + + P+I L Y
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIHVEMKPGIGPWLPNPIRTHKDLDSVIVPDIHDTLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I + ++KL + I LIGF G+PWT+ Y + G K+ + + F + A + L
Sbjct: 121 --VMEAIKMTKEKLNDDIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPVAAHEL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +A
Sbjct: 179 LQKITDTTILYLKEKVKAGVNAVQVFDSWGGMLSPVDYQEFSWQYMQQIIDALK---DDA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + + A+G+DW+ A L +QGN DP RL
Sbjct: 236 PVIAFGKGCWFALDTMAK-SGAAALGVDWTCSARNARYLTGGNITLQGNFDPTRLFSPPS 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 295 EIKKMVKQMIDDFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 340
>gi|150398400|ref|YP_001328867.1| uroporphyrinogen decarboxylase [Sinorhizobium medicae WSM419]
gi|171460833|sp|A6UEF2|DCUP_SINMW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|150029915|gb|ABR62032.1| uroporphyrinogen decarboxylase [Sinorhizobium medicae WSM419]
Length = 343
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 208/345 (60%), Positives = 257/345 (74%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ +K+LEVL G + PPPIWLMRQAGRYLPEYR R K +FLD+CYTPE VE+TL
Sbjct: 1 MSGTHRKVLEVLNGRSLTPPPIWLMRQAGRYLPEYRATRIKAGSFLDLCYTPELAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILV+ DAL RNVRF E +GPRMDPI I L + + +L
Sbjct: 61 QPIRRYGFDAAILFSDILVVPDALNRNVRFEEGQGPRMDPIDEDGIAQL--SQTGVIEHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+F+++S LR +L ITL+GFCGAPWTVA+YMI+G D R+FAY++ +AF L
Sbjct: 119 APVFETVSRLRGELAAEITLLGFCGAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D+SA+YL+ QI G D +QIFD+ AG LGE EF+ YA V RII++VR + P+A
Sbjct: 179 LALLADISADYLVEQIDRGADAVQIFDSWAGVLGEEEFQRYAVEPVRRIIASVRSRRPSA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I+FAKGAG +LKNYR+ T ++AIGLDWSVPLSFA ELQK+GPVQGNLDP+R+V G
Sbjct: 239 KIIAFAKGAGILLKNYRQATGADAIGLDWSVPLSFAAELQKDGPVQGNLDPVRVVAGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ ILDVLG GP IFNLGHGITP DP++V LV VR +
Sbjct: 299 LEHGIDRILDVLGQGPLIFNLGHGITPDADPEHVAALVSRVRGRR 343
>gi|172045952|sp|Q5ZTY0|DCUP_LEGPH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 352
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 134/343 (39%), Positives = 201/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 6 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L I L
Sbjct: 66 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLK--IPSIPESLSY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+
Sbjct: 124 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLN 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 184 KLAVSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 244 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 302
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 303 RSEVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|325286454|ref|YP_004262244.1| Uroporphyrinogen decarboxylase [Cellulophaga lytica DSM 7489]
gi|324321908|gb|ADY29373.1| Uroporphyrinogen decarboxylase [Cellulophaga lytica DSM 7489]
Length = 342
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 198/346 (57%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ V N GP + +PI T + + P+I+ L Y
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIEVEMKPNFGPYLPNPIRTSKDLESVIVPDINSTLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + ++KL + I LIGF G+PWT+ Y + G K + + F + N A + L
Sbjct: 121 --VMDAIKMTKEKLNDDIPLIGFAGSPWTILCYCVQGQGSKTFDKAKEFCFTNPVAAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + A
Sbjct: 179 LQKITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSWQYIQQIIDALKDE---A 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + + ++A+G+DW+ A L +QGN DP RL+ +
Sbjct: 236 PVIAFGKGCWFALGDMAK-SGASALGVDWTCSARNARYLTGGNITLQGNFDPSRLLSPPE 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +++ G +I NLGHGI P + +N + V+ K
Sbjct: 295 DIKKMVHQMINEFGKDKYIVNLGHGILPNIPLENAKAFIDAVKEYK 340
>gi|119356021|ref|YP_910665.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides DSM
266]
gi|166234244|sp|A1BCW4|DCUP_CHLPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119353370|gb|ABL64241.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides DSM
266]
Length = 351
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 192/348 (55%), Gaps = 7/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELAAEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G +V +E++G R+ P ++ + I L +
Sbjct: 62 DLMGVDAAIIFSDILVVNEAMGMDVEIIESKGIRLSPAIRSQVDIDRLIIPDINEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 MDAIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V EY++ QI AG D IQIFD+ A L E ++ +A + + A++ KYP+ I
Sbjct: 182 ISSVITEYVLMQIEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAIKTKYPDTPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L T +A+GL W++ ++ A EL +QGN+DP L +
Sbjct: 242 VFSKDCNTILSEIAD-TGCDAMGLGWNMDIAKARKELNDRVCIQGNMDPTVLYGTPDKIR 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IL G +FNLGHGI P VDP N+ LV+ V+ E +
Sbjct: 301 SEAAKILKQFGQHTATSGHVFNLGHGILPDVDPANLKLLVEFVKEESV 348
>gi|254363142|ref|ZP_04979191.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica PHL213]
gi|153095036|gb|EDN75587.1| uroporphyrinogen decarboxylase [Mannheimia haemolytica PHL213]
Length = 354
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 184/351 (52%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L+ L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCRNADLACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGP+ P+ + P D +
Sbjct: 61 LQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARPVASLNDVNQLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y
Sbjct: 120 ELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYAEPNILR 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD LSD YL AQI A + +FDT G L +++ ++ + +I+ + R+
Sbjct: 180 KLLDKLSDRVILYLNAQIKADAQAVMVFDTWGGVLAHEDYKAFSLHYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F KG G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 240 GRKVPVTLFTKGGGLWLEAIAE-TGCDAVGLDWTVDIADARRRIGDKVALQGNMDPSVLY 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G +FNLGHGI V ++ V + +
Sbjct: 299 ASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVPVESPKVFVDAIHNYS 349
>gi|307610754|emb|CBX00361.1| uroporphyrinogen decarboxylase [Legionella pneumophila 130b]
Length = 352
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 134/343 (39%), Positives = 200/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 6 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L I L
Sbjct: 66 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLK--IPSIPESLSY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL
Sbjct: 124 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLS 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 184 KLAASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 244 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 302
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 303 RSEVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|170718716|ref|YP_001783906.1| uroporphyrinogen decarboxylase [Haemophilus somnus 2336]
gi|189083009|sp|B0US07|DCUP_HAES2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|168826845|gb|ACA32216.1| uroporphyrinogen decarboxylase [Haemophilus somnus 2336]
Length = 354
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 185/348 (53%), Gaps = 7/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEY+ R K +F+ +C + E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAKAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY+ DAAILFSDIL I DA+G + F EGP+ PI + P D L
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPIDNKSAVQNLPIPDPE-QELQY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + LLD
Sbjct: 124 VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D YL AQI+AGV + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 184 KLADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGYKV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 244 PVTLFTKGGGLWLEAMA-STGCDALGLDWTVNLAEAKARVGHKVALQGNMDPSVLYASPA 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G G +FNLGHGI V + V V I
Sbjct: 303 RIEQEVQQILADFGQGSGHVFNLGHGIHQDVPEISPKVFVDAVHQYSI 350
>gi|163757469|ref|ZP_02164558.1| uroporphyrinogen decarboxylase [Hoeflea phototrophica DFL-43]
gi|162284971|gb|EDQ35253.1| uroporphyrinogen decarboxylase [Hoeflea phototrophica DFL-43]
Length = 347
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 182/344 (52%), Positives = 242/344 (70%), Gaps = 3/344 (0%)
Query: 1 MNERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + +++VL G + PPP+WLMRQAGRYLPEYR+ R K FL++CYTP+ VE+T
Sbjct: 2 MTNVGDRKVMKVLAGETVFPPPVWLMRQAGRYLPEYRKTRATAKGFLNLCYTPDLAVEVT 61
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPIRRY FDAAILFSDILVI DAL RNV FVE EGP+MDPI + I L + ++
Sbjct: 62 LQPIRRYGFDAAILFSDILVIPDALDRNVHFVEGEGPKMDPIAPEAIARL--DASGMHDH 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+++++ LR +LP TL+GFCGAPWTVA+YMI+G D R+FA Q++ F
Sbjct: 120 LAPVYETVRRLRAELPQETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAMQHAEEFKM 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+++S +YLIAQI AG D +QIFD+ AG L E +F++Y+ + V R++ + R+ P
Sbjct: 180 LIDRLTEISTDYLIAQIDAGADAVQIFDSWAGVLSEVDFQSYSVQPVKRMVERINRERPG 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I FAKGAG +L+NYR T N +GLDW+VP S A +QK G VQGNLDP+R++ G
Sbjct: 240 VPVIGFAKGAGALLENYREETGVNCVGLDWTVPASLARRIQKGGAVQGNLDPLRVIAGGS 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+ +L+ LG GP IFNLGHGITPQ DP+NV L+ +R
Sbjct: 300 ALDEGVDLVLETLGEGPLIFNLGHGITPQADPENVTRLMNRIRG 343
>gi|255037179|ref|YP_003087800.1| uroporphyrinogen decarboxylase [Dyadobacter fermentans DSM 18053]
gi|254949935|gb|ACT94635.1| uroporphyrinogen decarboxylase [Dyadobacter fermentans DSM 18053]
Length = 342
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + +L +G P+W+MRQAGR L EYR +R+K +F+ + TPE E+TL
Sbjct: 1 MNLKNDLLLRAARGEKTERTPVWMMRQAGRILAEYRAVREKAGSFIKLATTPEMAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPN-IDLFLNY 119
QP+ DAAI+FSDILVI +A+G +E GP P T + L I
Sbjct: 61 QPVDLLGVDAAIIFSDILVIPEAMGLPYEMIEQRGPVF-PSTVHSLADLQKLHIAEPETD 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +I I ++ L + LIGF GAP+T+ YM G K + Y +
Sbjct: 120 LKYVLDAIKITKEGLAGRVPLIGFAGAPFTIFCYMTEGKGSKTFSVAKKHLYAEPEFSHT 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D + YL AQI AG D++Q+FD+ AG L ++ ++ + +I A+
Sbjct: 180 LLQQITDSTIAYLKAQIAAGADIVQLFDSWAGILSPEQYRVFSLPYIKQICDAITE---- 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
FAKGA + K L+ + +GLDW++ +S + L +QGNLDP L
Sbjct: 236 VPVTVFAKGAFFARKEIGELS-CSVVGLDWNMDISESRALVPNKTLQGNLDPCVLYASYD 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V ++D G+ +I NLGHG+ P DP V ++ V+
Sbjct: 295 QIRKEVKNMVDQFGTQRYIANLGHGVYPDTDPDKVRCFIEAVKEYS 340
>gi|52842245|ref|YP_096044.1| uroporphyrinogen decarboxylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629356|gb|AAU28097.1| uroporphyrinogen decarboxylase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 353
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 134/343 (39%), Positives = 201/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 7 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L I L
Sbjct: 67 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLK--IPSIPESLSY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+
Sbjct: 125 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLN 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 185 KLAVSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 245 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 303
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 304 RSEVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 346
>gi|260061128|ref|YP_003194208.1| Uroporphyrinogen-III decarboxylase [Robiginitalea biformata
HTCC2501]
gi|88785260|gb|EAR16429.1| Uroporphyrinogen-III decarboxylase [Robiginitalea biformata
HTCC2501]
Length = 349
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 193/354 (54%), Gaps = 17/354 (4%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E L+ L+G + PP+W+MRQAGRYLPE+ +I+KK+ +F C TPE
Sbjct: 1 MTENRVQPANDLFLKALRGETVERPPVWMMRQAGRYLPEFMEIKKKY-DFFTRCQTPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPN 112
E+T+QPIRRY DAAILFSDILV+ A+ V GP + +P+ + + P+
Sbjct: 60 SEITVQPIRRYGMDAAILFSDILVVPQAMDIEVEMKPGIGPWLPNPVRSVADVEKAVVPD 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ L Y + +I + +KL + LIGF G+PWT+ Y + G K + + F +
Sbjct: 120 AEDALGY---VMDAIRLTNEKLGGQVPLIGFAGSPWTIFCYCVQGQGSKSFDKAKAFCFS 176
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A + LL+ ++ + +YL A++ AGV +Q+FD+ G L +++ ++ + + RI+ A
Sbjct: 177 QPEAAHALLEKITQTTIDYLKAKVAAGVHAVQLFDSWGGMLSPADYQEFSWQYLQRIVDA 236
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
++ A I F KG + L+ + + ++A+G+DW++ A EL +QGN DP
Sbjct: 237 LKDL---APVIVFGKGCWFALETMAQ-SGASALGVDWTLTPQKARELSGGNITLQGNFDP 292
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
RL+ + V ++ G +I NLGHGI P+V ++ + V++ +
Sbjct: 293 ARLLSPPDTIRRMVREMIRGFGKDKYIVNLGHGILPEVPVEHAGAFIDAVKTYR 346
>gi|261401614|ref|ZP_05987739.1| uroporphyrinogen decarboxylase [Neisseria lactamica ATCC 23970]
gi|269208319|gb|EEZ74774.1| uroporphyrinogen decarboxylase [Neisseria lactamica ATCC 23970]
Length = 354
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 123/348 (35%), Positives = 186/348 (53%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L
Sbjct: 63 PLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNVQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L++ + ++A+GLDW+ + A + K+ +QGN DP L
Sbjct: 242 VPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGKQVALQGNFDPFALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G G +FNLGHGI DPK+ LV TV
Sbjct: 301 ESIRTEAARILADYGHGSGHVFNLGHGINQHADPKHAKILVDTVHELS 348
>gi|114330618|ref|YP_746840.1| uroporphyrinogen decarboxylase [Nitrosomonas eutropha C91]
gi|122314388|sp|Q0AIF1|DCUP_NITEC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114307632|gb|ABI58875.1| uroporphyrinogen decarboxylase [Nitrosomonas eutropha C91]
Length = 356
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 185/346 (53%), Gaps = 5/346 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L ++ P+W+MRQAGRYLPEY Q R + +FL +C P E+TLQP+
Sbjct: 6 NDTFIRALLRQPVDYTPVWMMRQAGRYLPEYNQTRARAGDFLALCKNPALATEVTLQPLD 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ DAAILFSDIL I DA+G + F EGPR + +E + + + +L +
Sbjct: 66 RFPLDAAILFSDILTIPDAMGLGLYFSTGEGPRFERPLREEREIHSLIVPDPGTHLRYVM 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +RK L N + LIGF G+P+T+A YM+ G D+ Q + Y + +L+
Sbjct: 126 DAVTEIRKALNNRVPLIGFSGSPFTLACYMVEGASSNDYRQIKTMLYTRPDLLHHILEVT 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PNAKF 242
+ YL AQI AG + IFD+ G L ++ ++ R + +I+ ++R++
Sbjct: 186 AQAVIVYLNAQIEAGAQAVMIFDSWGGALSHAAYQEFSLRYMTQIMEGLKREHDSERIPN 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I F KG G L++ + +AIGLDW++ + A Q + +QGNLDP L + +
Sbjct: 246 ILFTKGGGLWLESIMA-SGCDAIGLDWTIDIGEARRRTQDKVALQGNLDPAVLFSSPEAI 304
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V IL G G +FNLGHGI+ P+N LV+TV + +
Sbjct: 305 AAEVGKILASYGHGHGHVFNLGHGISQFTPPENAKTLVETVHMQSV 350
>gi|148359600|ref|YP_001250807.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Corby]
gi|296107642|ref|YP_003619343.1| uroporphyrinogen decarboxylase [Legionella pneumophila 2300/99
Alcoy]
gi|167012315|sp|A5IDL1|DCUP_LEGPC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148281373|gb|ABQ55461.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Corby]
gi|295649544|gb|ADG25391.1| uroporphyrinogen decarboxylase [Legionella pneumophila 2300/99
Alcoy]
Length = 352
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 133/343 (38%), Positives = 200/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 6 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGP +P+ T+ I+ L I L
Sbjct: 66 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHTLK--IPSIPESLSY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+
Sbjct: 124 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLN 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 184 KLAVSVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 244 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 302
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 303 RREVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|172045961|sp|Q5WV12|DCUP_LEGPL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 352
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 134/343 (39%), Positives = 200/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 6 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREYAGDFLNLCKNPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L I L
Sbjct: 66 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLK--IPSIPESLSY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL
Sbjct: 124 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLS 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 184 KLAASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 244 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 302
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 303 RSEVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|313676029|ref|YP_004054025.1| uroporphyrinogen decarboxylase [Marivirga tractuosa DSM 4126]
gi|312942727|gb|ADR21917.1| uroporphyrinogen decarboxylase [Marivirga tractuosa DSM 4126]
Length = 348
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 113/347 (32%), Positives = 183/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + P+WLMRQAGR LPEYR++R F+++ TPE E+T+
Sbjct: 6 MELKNDLLLRAAKGEKVERTPVWLMRQAGRILPEYRKVRASVSGFIELAQTPELAAEVTI 65
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ + DAAI+FSDILVI +A+G +E GPR + + ++ L
Sbjct: 66 QPVDILDVDAAIIFSDILVIPEAMGLPYEMIEKRGPRFPETIKSKADVEKLSVANVEESL 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I I +K+L + LIGF GAPWT+ +YM+ G K + + Y + + L
Sbjct: 126 SYVTKAIQITKKELNGRVPLIGFAGAPWTIFAYMVEGSGSKTFSKAKAMLYTDPELSHQL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL AQI AG D++Q+FD+ AG L +++ ++ + +I A++ N
Sbjct: 186 LQKITDSTIAYLKAQIAAGADLVQVFDSWAGILSHQQYKEFSIPYLKKIADAIQ----NV 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
FAK A + +L D IGLDW++ + + +QGNLDP L
Sbjct: 242 PKTVFAKDAHAAFSDLSKL-DYQTIGLDWTMNPVEVRDIVGANKTLQGNLDPCVLYADKA 300
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ +L+ G+G I NLGHG+ P ++P +V ++ V+ +
Sbjct: 301 SIRKHTKKMLEEFGAGRHIANLGHGVYPDINPDHVKYFIEAVKGFSV 347
>gi|296313856|ref|ZP_06863797.1| uroporphyrinogen decarboxylase [Neisseria polysaccharea ATCC 43768]
gi|296839586|gb|EFH23524.1| uroporphyrinogen decarboxylase [Neisseria polysaccharea ATCC 43768]
Length = 354
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 122/348 (35%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIW+MRQAGRYLPEY+ R K +FLD+C E E+T+Q
Sbjct: 3 SLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTELATEVTIQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R++ DAAILFSDIL + DA+G + F E EGP+ + E + ++ + L
Sbjct: 63 PLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERALQHEADIAKLHVP-DMGKLQ 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +L
Sbjct: 122 YVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKIL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 182 DTNVQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRR 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I FAKG G L++ + ++A+GLDW+ + A + + +QGN DP L
Sbjct: 242 VPVIVFAKGGGLWLESMAEI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTP 300
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G G +FNLGHGI DPK+ LV TV
Sbjct: 301 ESIRTEAARILADYGHGSGHVFNLGHGINQHADPKHAKILVDTVHELS 348
>gi|222150249|ref|YP_002551206.1| uroporphyrinogen decarboxylase [Agrobacterium vitis S4]
gi|221737231|gb|ACM38194.1| uroporphyrinogen decarboxylase [Agrobacterium vitis S4]
Length = 346
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 208/343 (60%), Positives = 256/343 (74%), Gaps = 2/343 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +K+L+VL+G ++PPPIWLMRQAGRYLPEYRQ R + +FLD+CY+PE E+TLQ
Sbjct: 4 SAENRKVLKVLEGQSLSPPPIWLMRQAGRYLPEYRQTRAQAGSFLDLCYSPELATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
PIRRY FDAAILFSDILVI DAL RNV F E +GP M PIT EI L +L
Sbjct: 64 PIRRYAFDAAILFSDILVIPDALNRNVTFTEGKGPEMTPITADEILAL--PEQSVFPHLN 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+ +++S LR+ LP+ TL+GFCGAPWTVA+YMI+G D R+FAY++ +AF LL
Sbjct: 122 PVIETVSRLRQTLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRHRQAFLRLL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+D+SAEYL AQI AG D +QIFD+ AG LGE EF ++ + V RII +R P+AK
Sbjct: 182 DHLADLSAEYLQAQIDAGADAVQIFDSWAGVLGEEEFADFCVKPVKRIIDKLRLSRPDAK 241
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
ISFAKGAG +LK+YRR T ++AIGLDWSVPLSFA ELQK+GPVQGNLDPM V G Q M
Sbjct: 242 IISFAKGAGTLLKDYRRRTGADAIGLDWSVPLSFAAELQKDGPVQGNLDPMLAVAGGQAM 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
DG++ ILD LG+GP IFNLGHGITPQ DP+ V +LV+ VR +
Sbjct: 302 RDGIDRILDRLGTGPLIFNLGHGITPQADPETVRELVQHVRQK 344
>gi|152995149|ref|YP_001339984.1| uroporphyrinogen decarboxylase [Marinomonas sp. MWYL1]
gi|150836073|gb|ABR70049.1| uroporphyrinogen decarboxylase [Marinomonas sp. MWYL1]
Length = 366
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 122/345 (35%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +FL +C + E+TLQP+
Sbjct: 6 KNDRFLRALLKQPVDTTPVWMMRQAGRYLPEYRASRATAGDFLSLCKNDAFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+RY+ DAAILFSDIL I DA+G + F EGP+ I ++ P N L
Sbjct: 66 KRYDLDAAILFSDILTIPDAMGLGLYFETGEGPKFRHTIRSKADVDAIPVT--TANDLGY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L + LIGF G+PWT+A+YM+ GG KD + Y++ + LLD
Sbjct: 124 VMKAVTTIRHALNGDVPLIGFSGSPWTLATYMVEGGSSKDFRHIKAMMYRSPETLHALLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QI AG +QIFDT G L ++ ++ + +I+ + R +
Sbjct: 184 KLAKSVTAYLNGQILAGAQALQIFDTWGGVLSGPMYQQFSLLYMKQILDGLIRVHEGKRI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F K G L+N T +A+GLDW+ ++ A + + +QGN+DP L G
Sbjct: 244 PVILFTKNGGQWLENMAA-TGPDALGLDWTTDIAEARARVGDKVALQGNIDPCVLYAGKD 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V +L G+G +FNLGHGI V+P + L+ V
Sbjct: 303 VIEHEVENVLSGFGTGSGHVFNLGHGIHQFVNPDHPKYLIDAVHE 347
>gi|189499267|ref|YP_001958737.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides BS1]
gi|238058015|sp|B3EL29|DCUP_CHLPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189494708|gb|ACE03256.1| uroporphyrinogen decarboxylase [Chlorobium phaeobacteroides BS1]
Length = 351
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 128/347 (36%), Positives = 194/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPVPRTPIWVMRQAGRYLPEYRAIREKT-DFLTLCKTPELATEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G NV +E++G R+ P ++ + I L +
Sbjct: 62 DIIGVDAAIIFSDILVVNEAMGMNVEIIESKGIRLSPPIRSQVDIDRLIIPDINEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ + +K+L + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 MDALRMTKKELDGRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V EYL+ QI AG D +QIFD+ A L E ++ +A + + AV+ KYP+ I
Sbjct: 182 ISRVITEYLLMQIEAGADAVQIFDSWASALSEDDYREFALPYIKESVQAVKTKYPDTPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L + T +A+GL W++ +S A EL+ +QGN+DP L + +
Sbjct: 242 VFSKDCNTILSDIAD-TGCDAMGLGWNMDISKARAELKDRVTIQGNMDPTVLYGTHDKIR 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+ G +FNLGHGI P VDP+N+ LV V+ E
Sbjct: 301 AEAGKILERFGQHSECSGHVFNLGHGILPDVDPENLKCLVDFVKEES 347
>gi|54297955|ref|YP_124324.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Paris]
gi|81679428|sp|Q5X3M4|DCUP_LEGPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|53751740|emb|CAH13162.1| Uroporphyrinogen decarboxylase [Legionella pneumophila str. Paris]
Length = 352
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 132/343 (38%), Positives = 198/343 (57%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 6 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREHAGDFLNLCKNPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGP +P+ T+ I+ L I L
Sbjct: 66 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPCFTNPLQDTKAIHALK--IPSIPESLSY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL+
Sbjct: 124 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLN 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YL QI AGV+ + IFDT G L +++++ + +I+ ++ +YP+
Sbjct: 184 KLAVSVTAYLTEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKNEYPDIPV 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 244 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTAKNCI 302
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 303 RREVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 345
>gi|15603599|ref|NP_246673.1| UroD [Pasteurella multocida subsp. multocida str. Pm70]
gi|13431433|sp|P57964|DCUP_PASMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|12722148|gb|AAK03818.1| UroD [Pasteurella multocida subsp. multocida str. Pm70]
Length = 354
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 184/347 (53%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLKALLREPVDMTPVWMMRQAGRYLPEYRATRAVAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDIL I DA+G + F EGP+ PI TQ P D L
Sbjct: 65 RRYPLDAAILFSDILTIPDAMGLGLSFGVGEGPKFAHPIETQRAVQNLPIPDPE-GELQY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + + LLD
Sbjct: 124 VMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMLYADPQLLHQLLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D YL AQI AG + IFDT G LG E+ +++ + +I++ + R+
Sbjct: 184 KLADAVILYLNAQIKAGAQSVMIFDTWGGVLGHREYLDFSLHYMHKIVAGLIRENEGRKV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+G+DW+V L+ A + + +QGN+DP L
Sbjct: 244 PVTLFTKGGGMWLEAMAE-TGCDALGVDWTVNLAQAKARVGHKVALQGNMDPSVLYASPA 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G G +FNLGHGI V ++ V +
Sbjct: 303 RIEQEVRSILADFGEGSGHVFNLGHGIHQDVPEQSPAVFVNAIHQFS 349
>gi|54294926|ref|YP_127341.1| uroporphyrinogen decarboxylase [Legionella pneumophila str. Lens]
gi|53754758|emb|CAH16245.1| Uroporphyrinogen decarboxylase [Legionella pneumophila str. Lens]
Length = 353
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 134/343 (39%), Positives = 200/343 (58%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L+ + PIW+MRQAGRYLPEYR++R+ +FL++C PE E+TLQP+R
Sbjct: 7 QSLFLRALRRQPVERTPIWIMRQAGRYLPEYRKVREYAGDFLNLCKNPELACEVTLQPLR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI-TTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F E EGPR +P+ T+ I+ L I L
Sbjct: 67 RYALDAAILFSDILTIPDAMGLGLYFAEGEGPRFTNPLQDTKAIHTLK--IPSIPESLSY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F + ++R+++P + LIGF G+PWT+A YM+ GG +D + Y A + LL
Sbjct: 125 VFDAARLIRQEMPKELPLIGFSGSPWTLACYMVEGGSSRDFKRILNLIYTEKEAAHLLLS 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ YLI QI AGV+ + IFDT G L +++++ + +I+ ++++YP+
Sbjct: 185 KLAASVTAYLIEQIKAGVNAVMIFDTWGGVLTPQNYKDFSLAYMHQIVQQLKKEYPDIPV 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I F K G L+ + T +A+G+DW+ L+ A + + +QGNLDP L+ +
Sbjct: 245 ILFTKNGGQWLE-WMAETGCDALGVDWTCDLASARKRVGGKVALQGNLDPAVLLTTKNCI 303
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++L G G IFNLGHGITP V P+NV +++ V
Sbjct: 304 RSEVGSVLASYGYGTGHIFNLGHGITPDVPPENVAIMIEAVHE 346
>gi|261856520|ref|YP_003263803.1| uroporphyrinogen decarboxylase [Halothiobacillus neapolitanus c2]
gi|261836989|gb|ACX96756.1| uroporphyrinogen decarboxylase [Halothiobacillus neapolitanus c2]
Length = 365
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 183/346 (52%), Gaps = 7/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + L ++ PIW+MRQAGRYLPEY+ R K +F+D+C + E E+TLQ
Sbjct: 13 TLKNDRFIRALLREPVDCTPIWIMRQAGRYLPEYKATRAKAGSFMDLCRSAELACEVTLQ 72
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ R++ DAAILFSDIL I DA+G + F EGP +P+ + P D L
Sbjct: 73 PLERFDLDAAILFSDILTIPDAMGLGLTFSAGEGPVFANPLRDRRSIEQLPLPDPE-GEL 131
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++S +R L + LIGF G+PWT+A+YM+ GG K+ + Y + + + L
Sbjct: 132 RYVMDAVSTIRGALNGRVPLIGFSGSPWTLATYMVEGGSTKEFAHIKGLMYSDPASAHLL 191
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
LD LS +YL AQ+ G + IFDT G L ++ ++ + +I+S + R++
Sbjct: 192 LDKLSTAVTDYLNAQVRRGAQALMIFDTWGGVLSPDKYREFSLAYMNKIVSGLIREHEGQ 251
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I F KG G + ++ +GLDW+V + ++ + +QGNLDP L
Sbjct: 252 RIPVILFTKGGGAWAPEIAA-SGADGVGLDWTVDIGAVRQQVGGKVALQGNLDPSVLYAP 310
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ V +L G G +FNLGHGI V+P NV LV V
Sbjct: 311 EAVIEQEVARVLSSYGQGSGHVFNLGHGIHQHVNPDNVKVLVDAVH 356
>gi|260913276|ref|ZP_05919758.1| uroporphyrinogen decarboxylase [Pasteurella dagmatis ATCC 43325]
gi|260632863|gb|EEX51032.1| uroporphyrinogen decarboxylase [Pasteurella dagmatis ATCC 43325]
Length = 354
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 182/347 (52%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C E E+TLQP+
Sbjct: 5 KNDRYLRALLREPVDMTPVWMMRQAGRYLPEYRATRTVAGDFMSLCRNAELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY+ DAAILFSDIL I DA+G + F EGP+ PI ++ P D + L
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFAHPIDSKSAVQNLPIPDPE-SELQY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R +L + LIGF G+PWT+A+YM+ G K + + Y + + + LLD
Sbjct: 124 VMNAVRTIRLELKGDVPLIGFSGSPWTLATYMVEGCSSKAFTKIKRMLYADPQLLHQLLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D YL AQI AG + IFDT G LG EF +++ + + +I+ A+ R+
Sbjct: 184 KLADSVTLYLNAQIKAGAQSVMIFDTWGGVLGHREFVDFSLQYMHKIVDALIRENEGRKV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+G+DW+V L A + + +QGN+DP L
Sbjct: 244 PVTLFTKGGGLWLEAMAE-TGCDALGIDWTVNLGEAKARVGHKVALQGNMDPSVLYASPD 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G G +FNLGHGI V + V +
Sbjct: 303 RIEQEVRSILADFGQGSGHVFNLGHGIHQDVLASSPKIFVDAIHQYS 349
>gi|241206943|ref|YP_002978039.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860833|gb|ACS58500.1| uroporphyrinogen decarboxylase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 335
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 203/335 (60%), Positives = 256/335 (76%), Gaps = 2/335 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP++ VE+TLQPIRRY F
Sbjct: 1 MRVLSGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDHAVEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAILFSDILVI DA+ RNVRF E GP MDPI I LN + ++YL P+ +++
Sbjct: 61 DAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLN--GEEVVDYLRPVLETVR 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR++LP TL+GFCGAPWTVA+YMI+G D R+FAY++ RAF LL L+DVS
Sbjct: 119 RLREELPVETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRHPRAFEHLLMLLADVS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
A+YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++V+ + P+A+ I+FAKG
Sbjct: 179 ADYLVAQIDAGADAVQIFDSWAGVLGEKEFEAFAVRPVARMIASVKSQRPHARIIAFAKG 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
AGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + DG++ I
Sbjct: 239 AGYQLKTYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEDGIDDI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L LG+GP IFNLGHGITPQ DP++V LV VR
Sbjct: 299 LQHLGNGPLIFNLGHGITPQADPEHVRLLVDRVRG 333
>gi|189347814|ref|YP_001944343.1| uroporphyrinogen decarboxylase [Chlorobium limicola DSM 245]
gi|238058013|sp|B3EHV5|DCUP_CHLL2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189341961|gb|ACD91364.1| uroporphyrinogen decarboxylase [Chlorobium limicola DSM 245]
Length = 351
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 193/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELAAEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI +A+G NV +E +G ++ P+ + + + L +
Sbjct: 62 DLMGVDAAIIFSDILVINEAMGMNVEIIETKGIKLSPVIRSKADIDKLIVPDIDEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 MDALRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPQMAHLLLGK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S+ + YL+ Q+ AG D IQIFD+ A L E ++ +A + + + AV+ KYP+ I
Sbjct: 182 ISETISAYLLKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVQAVKAKYPDIPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L + T +A+GL W + ++ A EL+ +QGNLDP L + +
Sbjct: 242 VFSKDCNTILSDIAD-TGCDAMGLGWGIDIAKARAELKDRVALQGNLDPTVLYGTPEKIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 301 SEAAKVLKQFGQHTESSGHVFNLGHGILPDVDPANLKLLVEFVKEES 347
>gi|113461676|ref|YP_719745.1| uroporphyrinogen decarboxylase [Haemophilus somnus 129PT]
gi|123327460|sp|Q0I5E2|DCUP_HAES1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112823719|gb|ABI25808.1| uroporphyrinogen decarboxylase [Haemophilus somnus 129PT]
Length = 354
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 185/347 (53%), Gaps = 5/347 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ L+ L ++ P+W+MRQAGRYLPEY+ R K +F+ +C + E+TLQP+
Sbjct: 5 KNERYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAKAGDFMSLCRNADLACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY+ DAAILFSDIL I DA+G + F EGP+ + + N I L +
Sbjct: 65 RRYDLDAAILFSDILTIPDAMGLGLSFGVGEGPKFARPVENKSAVQNLPIPDPEQELQYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + + LLD
Sbjct: 125 MNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPKILHLLLDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+D YL AQI+AGV + +FDT G LG E+ +++ + + +I+ + R+
Sbjct: 185 LADAVILYLNAQINAGVQAVMVFDTWGGVLGHREYLDFSLQYMHKIVDGLIRENDGYKVP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
F KG G L+ T +A+GLDW+V L+ A + + +QGN+DP L
Sbjct: 245 VTLFTKGGGLWLEAMA-STGCDALGLDWTVNLAEAKARVGHKVALQGNMDPSVLYASPAR 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G G +FNLGHGI V + V V +
Sbjct: 304 IEQEVQQILADFGQGSGHVFNLGHGIHQDVPEISPKVFVDAVHQYSV 350
>gi|291399020|ref|XP_002715187.1| PREDICTED: uroporphyrinogen decarboxylase [Oryctolagus cuniculus]
Length = 367
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 184/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +PI ++ + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPIREEQDLERLRDPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGGSSTMSQAKRWLYQRPQASHQLLQ 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVDPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 PKEEIGQLVQQMLDGFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHRHS 361
>gi|193214637|ref|YP_001995836.1| uroporphyrinogen decarboxylase [Chloroherpeton thalassium ATCC
35110]
gi|238058017|sp|B3QXB5|DCUP_CHLT3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193088114|gb|ACF13389.1| uroporphyrinogen decarboxylase [Chloroherpeton thalassium ATCC
35110]
Length = 353
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 197/348 (56%), Gaps = 9/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ PIW+MRQAGRYLPEYR++R K +F+ +C TPE E+T+QPI
Sbjct: 3 KNDLFLRALRREPCERTPIWVMRQAGRYLPEYREVRSKA-DFVTLCKTPELAAEVTVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAI+FSDILVI +A+G + +E++GPR+ +PI + D+ + L
Sbjct: 62 DIIGLDAAIIFSDILVIPEAMGMGLEIIESKGPRLYEPIRSAADIDRLVVPDVA-DKLGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I + +K+L + + LIGF GA WT+ +Y + GG K++ + Y + + LL
Sbjct: 121 VADAIRLTKKQLDDRVPLIGFAGAAWTLFTYAVEGGGSKNYRFAKELIYNHPDQAHKLLG 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+S V ++L+ QI GV+ +QIFD+ A L E +++ +A + + + AV+ K+P+
Sbjct: 181 KISQVITDFLLLQIEVGVNAVQIFDSWASALSEDDYKTFALPYIKQSVEAVKSKHPDIPV 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I FAK A +L + T +A+GL W++ ++ A EL +QGNLDP L + +
Sbjct: 241 IVFAKDANTILTDLAD-TGCDALGLSWNIDIARARQELNDRVALQGNLDPTVLYASPERI 299
Query: 302 IDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G +FNLGHGI P V+P+++ LV ++ E
Sbjct: 300 REEAGKILAKFGQHTEKSGHVFNLGHGILPDVNPEHLKALVDFIKEES 347
>gi|224058034|ref|XP_002193866.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 369
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 128/349 (36%), Positives = 193/349 (55%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F C +P+ ELTLQP+
Sbjct: 16 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRAS-QDFFATCRSPKLCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L + L
Sbjct: 75 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFTEPLKEVEDLLKLRQKVDVTSELGY 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R L + LIGF GAPWT+ SYMI GG + + + Y++ A + LL
Sbjct: 135 VFQAITLTRHSLEGKVPLIGFSGAPWTLMSYMIEGGGSTTMAKAKSWLYRHPEASHRLLR 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV +YL+ Q+ AG +Q+F++HAG LG F+++A + I AV+ K
Sbjct: 195 LLADVIIDYLVGQVAAGAQALQLFESHAGHLGPELFQDFALPYIQDIAQAVKSKLKEEAL 254
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P I FAK A Y L++ +GLDW++ A ++ K+ +QGNLDP L
Sbjct: 255 PLVPMIIFAKDAHYALRDLAH-AGYEVVGLDWTIRPQEARAQIGKDVTLQGNLDPCALYA 313
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 314 PKEKIGELVKKMLESFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHAHS 362
>gi|268316746|ref|YP_003290465.1| uroporphyrinogen decarboxylase [Rhodothermus marinus DSM 4252]
gi|262334280|gb|ACY48077.1| uroporphyrinogen decarboxylase [Rhodothermus marinus DSM 4252]
Length = 353
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 130/343 (37%), Positives = 184/343 (53%), Gaps = 5/343 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L + + P+W+MRQAGRYLPEYR +R + F D+ TPE E+TLQP+
Sbjct: 8 QNDLLLRAARREPVERTPVWIMRQAGRYLPEYRALRAD-EAFFDVVRTPELATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V + GP DP+ T E D+ L
Sbjct: 67 RRFPLDAAIIFSDILVVPQALGLRVEMIPGRGPYFPDPLRTVEDLRRLRRPDVR-EALRY 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I++ RK L + LIGFCGAPWT+ +YM+ GG K + + + Y+ A + LL
Sbjct: 126 MLEAITMTRKALAGRVPLIGFCGAPWTLMAYMVEGGGSKTFARAKGWLYRQPEASHRLLS 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+DV E+LIAQI AG V+Q+FD+ AG L F +A + RI V + P
Sbjct: 186 LLTDVLVEFLIAQIDAGAQVVQVFDSWAGVLSPDLFRTFALPYLRRIGEEVGKARPEVPR 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I FA+GA L + +GLDW++ A EL +QGNLDP L + +
Sbjct: 246 IVFARGAHASLAELAE-AGYDVVGLDWTIDPRQARELTGGRVALQGNLDPCALYAEPETI 304
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +L+ G I NLGHG+ P +P +V V+ V
Sbjct: 305 RRLTHRMLEAFGPRGHIANLGHGLHPDHNPDHVRAFVEAVHDY 347
>gi|71905674|ref|YP_283261.1| uroporphyrinogen decarboxylase HemE [Dechloromonas aromatica RCB]
gi|123747050|sp|Q47K40|DCUP_DECAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71845295|gb|AAZ44791.1| Uroporphyrinogen decarboxylase HemE [Dechloromonas aromatica RCB]
Length = 355
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 7/351 (1%)
Query: 1 MN-ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + L L P+WLMRQAGRYLPEY + RK+ NFL++C +P E+T
Sbjct: 1 MSRPKNDTFLRALLKEPTEYTPLWLMRQAGRYLPEYCETRKRAGNFLNLCKSPTMACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY+ DAAILFSDIL + DA+G + F E EGP+ + +E + N + +
Sbjct: 61 LQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLREEWAINNLTVTDPYEH 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R+ L N + LIGF G+P+T+A YM+ G D + Y +
Sbjct: 121 LGYVMDAVSEIRRALDNSVPLIGFSGSPYTLACYMVEGEGSSDFRNIKAMLYNRPDLLHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L +D YL AQI +G + IFDT G L +E ++ + + RI++ ++++
Sbjct: 181 ILSVTADSVIAYLNAQIDSGAQAVMIFDTWGGSLSNAAYEEFSLQYMRRIVAGLKKEKDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F K G L+ + +A+GLDW++ + A + + +QGNLDP L
Sbjct: 241 QRIPSIVFTKNGGLWLEKIADI-GCDAVGLDWTIDIGEARRRVGDKVALQGNLDPNVLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+++ +LD G +FNLGHGI+ P++V LV+ V S
Sbjct: 300 QPEIVAAEAKKVLDSFGPANTGHVFNLGHGISQFTPPESVTALVEAVHSHS 350
>gi|239833107|ref|ZP_04681436.1| uroporphyrinogen decarboxylase [Ochrobactrum intermedium LMG 3301]
gi|239825374|gb|EEQ96942.1| uroporphyrinogen decarboxylase [Ochrobactrum intermedium LMG 3301]
Length = 352
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 188/343 (54%), Positives = 242/343 (70%), Gaps = 2/343 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ K+K+L V+ G I PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQP
Sbjct: 11 DMKRKVLRVIDGEAIFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQP 70
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRR+ FDAAILFSDILVI ALGR++RF E GP M PI EI+ L + L P
Sbjct: 71 IRRFGFDAAILFSDILVIPHALGRDLRFEEGRGPLMTPIDADEIFWL--ETEGVAKRLEP 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++++ +LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+
Sbjct: 129 VYETVRLLREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + + V RI+ VR YP A+
Sbjct: 189 DLADVSAEYLIEQLDAGADAVQIFDSWSGVLDEDCFERFCIQPVARIVQKVRAVYPEARI 248
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F KGAG + YR T +A+GLDWSVPLSFA LQ EG +QGNLDP+R+V G +
Sbjct: 249 IGFPKGAGMLYAGYREKTGVDALGLDWSVPLSFAASLQNEGAIQGNLDPLRVVAGGNALD 308
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+GV+AIL+ LG GP IFNLGHGITPQ +NV ++ +R K
Sbjct: 309 EGVDAILERLGHGPLIFNLGHGITPQAPVENVQRMIDRIRGGK 351
>gi|87120721|ref|ZP_01076614.1| uroporphyrinogen decarboxylase [Marinomonas sp. MED121]
gi|86163949|gb|EAQ65221.1| uroporphyrinogen decarboxylase [Marinomonas sp. MED121]
Length = 367
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 123/345 (35%), Positives = 186/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYR R +FL +C E+ E+TLQP+
Sbjct: 6 KNDRFIRALLKQPVDTTPVWMMRQAGRYLPEYRASRAHAGDFLSLCKNDEFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGP+ I T+ P +N L
Sbjct: 66 ERYELDAAILFSDILTIPDAMGQGLYFETGEGPKFKKVIRTEADVDALPIAK--VNDLDY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L + LIGF G+PWT+A+YM+ GG KD + Y++ + LL
Sbjct: 124 VMKAVTTIRNALGGRVPLIGFSGSPWTLATYMVEGGSSKDFRHIKGMMYKSPEILHELLR 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ +YL QI AG +QIFDT G L +++ ++ + +II + R +
Sbjct: 184 KLAISVTDYLNGQIKAGAQAVQIFDTWGGVLSGPKYQEFSLMYMKQIIDGLIRVHDGKKI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F K G L+N + ++A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 244 PVIMFTKNGGQWLENMAA-SGTDALGLDWTTDMAEARARVGNKVALQGNIDPCVLYADKD 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ D V +L G+G +FNLGHGI VDP+ L+ V
Sbjct: 303 VIRDQVGEVLAGFGNGSGHVFNLGHGIHQFVDPEQPKYLIDAVHE 347
>gi|153008190|ref|YP_001369405.1| uroporphyrinogen decarboxylase [Ochrobactrum anthropi ATCC 49188]
gi|166234264|sp|A6WX72|DCUP_OCHA4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151560078|gb|ABS13576.1| uroporphyrinogen decarboxylase [Ochrobactrum anthropi ATCC 49188]
Length = 341
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 186/341 (54%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+K+L V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 KRKVLRVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILVI ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVIPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLLREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLDAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPEARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T +A+GLDWSVP SFA LQ+EG +QGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDALGLDWSVPFSFAAALQEEGAIQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ IL+ LG GP IFNLGHGITPQ +NV ++ +R K
Sbjct: 300 VDTILERLGQGPLIFNLGHGITPQAPIENVQRMIDRIRGGK 340
>gi|257091720|ref|YP_003165361.1| uroporphyrinogen decarboxylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044244|gb|ACV33432.1| uroporphyrinogen decarboxylase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 359
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 184/353 (52%), Gaps = 8/353 (2%)
Query: 1 MN-ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M L L P+WLMRQAGRYLPEY + RK+ +FL +C P E+T
Sbjct: 1 MTRPSNDSFLRALLKEPTAYTPVWLMRQAGRYLPEYCETRKRAGSFLQLCKNPALACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY+ DAAILFSDIL I DA+G + F + EGPR + +E + + ++
Sbjct: 61 LQPLARYDLDAAILFSDILTIPDAMGLGLYFTDGEGPRFERPLREEWAIRDLTAPDPWDH 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++ +R+ L N + LIGF G+P+T+A YM+ G D+ + Y+ +
Sbjct: 121 LRYVMDAVAEIRRALHNSVPLIGFAGSPYTLACYMVEGASSSDYRCIKGMLYERPDLLHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L +D YL AQI +G + IFD+ G L +E ++ + + RI+ + R+
Sbjct: 181 ILSVTADAVTAYLNAQIESGAQAVMIFDSWGGSLSAAAYEEFSLQYMQRIVGNLLRERGG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F KG G L+ + +A+GLDW++ + A + +QGN+DP L
Sbjct: 241 ERVPSIVFTKGGGLWLEAIADI-GCDAVGLDWTIDIGEARRRVGDRVALQGNIDPAVLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG---PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + +L+ G+G +FNLGHGI+ P+NV LV+ V + +
Sbjct: 300 SPEKVAAEARRVLESYGAGQNTGHVFNLGHGISQFTPPENVTALVEEVHAHSV 352
>gi|254804659|ref|YP_003082880.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha14]
gi|254668201|emb|CBA04943.1| uroporphyrinogen decarboxylase [Neisseria meningitidis alpha14]
gi|325203867|gb|ADY99320.1| uroporphyrinogen decarboxylase [Neisseria meningitidis M01-240355]
Length = 354
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHEADIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y + +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLHKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRLVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPFALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILADYGHGSGHVFNLGHGINQHADPEHTKILVDTVHELS 348
>gi|110597225|ref|ZP_01385513.1| uroporphyrinogen decarboxylase [Chlorobium ferrooxidans DSM 13031]
gi|110341061|gb|EAT59529.1| uroporphyrinogen decarboxylase [Chlorobium ferrooxidans DSM 13031]
Length = 350
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 131/349 (37%), Positives = 197/349 (56%), Gaps = 12/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELATEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI--YLLNPNIDLFLNYLL 121
DAAI+FSDILVI +A+G NV +E++G +++PI +Q L+ P+ID L Y
Sbjct: 62 ELMGVDAAIIFSDILVINEAMGMNVEIIESKGIKLNPIRSQADIDKLIVPDIDEKLGY-- 119
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + LL
Sbjct: 120 -VMDALRMTKKELDNRVPLIGFTGAAWTLFTYAVEGGGSKNYAYAKKMMYREPAMAHALL 178
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+S V Y++ QI AG D IQIFD+ A L E ++ YA + + A++ K+P+
Sbjct: 179 GKISGVITAYVLKQIEAGADAIQIFDSWASALSEDDYRVYALPYIKETVQAIKAKHPDTP 238
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F+K +L T +A+GL W + + A EL +QGNLDP L +
Sbjct: 239 VIVFSKDCNTILSEIAD-TGCDAMGLGWGMDIGKARAELNDRVALQGNLDPTVLYGTPAL 297
Query: 301 MIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G +FNLGHGI P +DP+N+ LV+ V+ E
Sbjct: 298 IKSEASKILKSFGQHTEHSGHVFNLGHGILPDMDPENLKLLVEFVKEES 346
>gi|91777014|ref|YP_546770.1| uroporphyrinogen decarboxylase [Methylobacillus flagellatus KT]
gi|123253838|sp|Q1GXV8|DCUP_METFK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91711001|gb|ABE50929.1| uroporphyrinogen decarboxylase [Methylobacillus flagellatus KT]
Length = 354
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 5/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L LQ P+W+MRQAGRYLPEYR+ RKK +F+D+C + E+TLQ
Sbjct: 3 SLKNDVFLRALQRQRTPYTPVWMMRQAGRYLPEYRETRKKAGSFMDLCKNTDLATEVTLQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ R+ DAAILFSDIL I DA+G + F E EGP+ + +E + + + L
Sbjct: 63 PLDRFPLDAAILFSDILTIPDAMGLGLYFEEGEGPKFERTLREESDIRKLAVPDIGSELR 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++S +R+ L + LIGF G+PWT+A+YM+ G D + AY + +L
Sbjct: 123 YVTDAVSQIRRALDGRVPLIGFSGSPWTLATYMVEGRGGTDFLTIKQMAYARPDLLHHIL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
+ YL AQI AG + IFD+ G L + ++ ++ + + +I+S + ++
Sbjct: 183 SVTAQAVTAYLNAQIAAGAQAVMIFDSWGGALSHYAYQEFSLQYMQQIVSGLTKESEGRV 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I F KG G L++ T ++A+GLDW++ L A + + +QGN+DP L+
Sbjct: 243 VPSIVFTKGGGLWLESQAE-TGADALGLDWTISLGEARKRVGSKVALQGNMDPAILLSTP 301
Query: 299 QVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V IL G +FNLGHGIT +N ++K V +
Sbjct: 302 EAVEKEVARILADYGIGNGHVFNLGHGITQFTPHENAEAMIKAVHA 347
>gi|30248462|ref|NP_840532.1| uroporphyrinogen decarboxylase [Nitrosomonas europaea ATCC 19718]
gi|38257434|sp|Q82X50|DCUP_NITEU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|30138348|emb|CAD84356.1| Uroporphyrinogen decarboxylase (URO-D) [Nitrosomonas europaea ATCC
19718]
Length = 355
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 186/346 (53%), Gaps = 5/346 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L ++ P+W+MRQAGRYLPEY Q R + +FL +C P++ E+TLQP+
Sbjct: 6 NDTFIRALLRQPVDYTPVWMMRQAGRYLPEYNQTRARAGSFLSLCKNPDFATEVTLQPLA 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++ DAAILFSDIL I DA+G + F + EGPR + +E + + + +L +
Sbjct: 66 RFSLDAAILFSDILTIPDAMGLGLYFADGEGPRFERPLREEREIRSLIVPDPDTHLRYVT 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ +R L N + LIGF G+P+T+A YM+ G + Q + Y + +L
Sbjct: 126 DAVRQIRTALNNRVPLIGFSGSPFTLACYMVEGAGSSEFRQIKTMLYARPDLLHHILGVT 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKF 242
+ YL AQI AG + IFD+ G L ++ ++ R + +I+ ++R++
Sbjct: 186 AQAVTAYLNAQIEAGAQAVMIFDSWGGALSHAAYQEFSLRYMNQILDGLKREHNGDRIPN 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I F KG G L++ + +AIGLDW++ + A Q + +QGNLDP L +V+
Sbjct: 246 ILFTKGGGLWLESIMA-SGCDAIGLDWTIDIGEARRRTQDKVALQGNLDPAVLFSSPEVI 304
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IL G G +FNLGHGI+ P+N L L++ V ++ +
Sbjct: 305 AAEAGKILASYGHGHGHVFNLGHGISQFTPPENALALIEAVHAQSV 350
>gi|251836950|pdb|3GW0|A Chain A, Urod Mutant G318r
Length = 367
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIRQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|118094545|ref|XP_422430.2| PREDICTED: similar to LOC496978 protein [Gallus gallus]
Length = 416
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 191/349 (54%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F D C +P+ ELTLQP+
Sbjct: 63 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRA-AQDFFDTCRSPKLCCELTLQPL 121
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L
Sbjct: 122 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKEVEDLLKLRQKVDVTAELGY 181
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R L + LIGF GAPWT+ SYM+ GG + + + Y++ A + LL
Sbjct: 182 VFQAITLTRHSLEGKVPLIGFSGAPWTLMSYMVEGGGSTTMAKAKSWLYRHPEASHRLLR 241
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+DV +YL+ Q+ AG +Q+F++HAG LG +F+ +A + I V+ K
Sbjct: 242 LLTDVVTDYLVGQVAAGAQALQLFESHAGHLGPEQFQEFALPYIRDIARDVKSKLKAEAL 301
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I FAK A Y L++ + +GLDW++ A ++ K +QGNLDP L
Sbjct: 302 SLVPMIVFAKDAHYALRDLAQ-AGYEVVGLDWTIQPQEARAQVGKGVTLQGNLDPCALYA 360
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 361 PKEKIGELVKKMLENFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHAHS 409
>gi|163745167|ref|ZP_02152527.1| uroporphyrinogen decarboxylase [Oceanibulbus indolifex HEL-45]
gi|161381985|gb|EDQ06394.1| uroporphyrinogen decarboxylase [Oceanibulbus indolifex HEL-45]
Length = 346
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 149/344 (43%), Positives = 211/344 (61%), Gaps = 1/344 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + IL L G + PPIW+MRQAGRYLPEYR R K +FL +CY PE E+TLQP
Sbjct: 2 TKNKTILRALAGETLPTPPIWMMRQAGRYLPEYRATRAKAGDFLSLCYNPELAAEVTLQP 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY FD +ILF+DIL++ ALG ++ FV EGPR+ ITT+ D ++L P
Sbjct: 62 IRRYGFDGSILFADILLVPQALGADLWFVTGEGPRLSTITTKAEMEALKPADAIHDHLAP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F+ L++
Sbjct: 122 IYETVRILSRELPEETTLIGFAGAPWTVATYMIAGKGTPDQGPAHALKDENPEVFDALME 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EYL QI AG +V+++FD+ AG L +F+ Y+ + +IISA++ ++P+
Sbjct: 182 RITLATIEYLDMQIQAGAEVVKLFDSWAGSLQGTDFDRYSTEPLRQIISALKARHPHVPI 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I+F +GAG N T ++ I +D V + E +Q G VQGNL +V G +
Sbjct: 242 IAFPRGAGARFANLHAATGADCIAIDDGVSAEWVAEHVQPNGCVQGNLKSSHMVTGGDAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ AI+D L GP IFNLGHGITP DP+NV ++ TVR +
Sbjct: 302 VQETRAIVDALSKGPHIFNLGHGITPDADPENVQLMIDTVRGTR 345
>gi|194333095|ref|YP_002014955.1| uroporphyrinogen decarboxylase [Prosthecochloris aestuarii DSM 271]
gi|238056493|sp|B4S3W2|DCUP_PROA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194310913|gb|ACF45308.1| uroporphyrinogen decarboxylase [Prosthecochloris aestuarii DSM 271]
Length = 351
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 193/347 (55%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPVPRTPIWVMRQAGRYLPEYRAIREKT-DFLTLCKTPELAAEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G +V+ +E +G ++ P ++ + I L +
Sbjct: 62 DIIGVDAAIIFSDILVVNEAMGMDVQIIETKGIKLTPPIRSQVDIDRLIIPDIEEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 MDAIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPQMAHMLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V EYL+ Q+ AG D +QIFD+ A L E ++ +A + + A++ KYP+ I
Sbjct: 182 ISQVITEYLLMQVEAGADALQIFDSWASALSEDDYREFALPYIKESVQAIKTKYPDIPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L + T +A+GL W++ ++ A ELQ +QGN+DP L + +
Sbjct: 242 VFSKDCNTILSDIAD-TGCDAMGLGWNMDIAKARKELQDRVCIQGNMDPTVLYGTHDKIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL G +FNLGHGI P VDP N+ LV V+ E
Sbjct: 301 AEAAKILKQFGQHTAESGHVFNLGHGILPDVDPANLKCLVDFVKEES 347
>gi|326796613|ref|YP_004314433.1| uroporphyrinogen decarboxylase [Marinomonas mediterranea MMB-1]
gi|326547377|gb|ADZ92597.1| Uroporphyrinogen decarboxylase [Marinomonas mediterranea MMB-1]
Length = 366
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 181/345 (52%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +FL +C ++ E+TLQP+
Sbjct: 6 KNDRFLRALLKEPVDTTPVWMMRQAGRYLPEYRTSRATAGDFLSLCKNQDFACEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G + F EGP+ + ++ P L
Sbjct: 66 ERYELDAAILFSDILTIPDAMGLGLYFETGEGPKFKHTVRSKADVDALPIA--TTTDLDY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L + LIGF G+PWT+A+YM+ GG KD + YQ + LL+
Sbjct: 124 VMRAVTTIRKALNGKVPLIGFSGSPWTLATYMVEGGSSKDFRHIKAMMYQTPDVLHALLN 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ +YL QI AG +QIFDT G L ++ ++ + +I+ + R++
Sbjct: 184 KLALSVIDYLNGQIKAGAQAVQIFDTWGGALSGPMYQRFSLMYMKQIMDGLIREHEGKKI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F K G L+N +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 244 PVIMFTKNGGQWLENMAA-AGPDALGLDWTTDIAEARARVGESVALQGNIDPCVLYADKD 302
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V +L+ G G +FNLGHGI V+P + L+ V
Sbjct: 303 VIEREVALVLEGFGHGSGHVFNLGHGIHQYVNPDHPKFLIDAVHE 347
>gi|306842818|ref|ZP_07475458.1| uroporphyrinogen decarboxylase [Brucella sp. BO2]
gi|306287012|gb|EFM58523.1| uroporphyrinogen decarboxylase [Brucella sp. BO2]
Length = 341
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 184/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPI
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIH 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLEAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL +G GP +FNLGHGITPQ +NV ++ VR EK
Sbjct: 300 VDAILARMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGEK 340
>gi|237654720|ref|YP_002891034.1| uroporphyrinogen decarboxylase [Thauera sp. MZ1T]
gi|237625967|gb|ACR02657.1| uroporphyrinogen decarboxylase [Thauera sp. MZ1T]
Length = 356
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 121/350 (34%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + L L P+WLMRQAGRYLPEY + RK+ +FL +C +P E+T
Sbjct: 1 MSRLKNDTFLRALLRQPTEYTPVWLMRQAGRYLPEYCETRKRAGSFLQLCKSPAMACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY+ DAAILFSDIL + DA+G + F E EGPR + E + N +
Sbjct: 61 LQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPRFERPLKDEWEIRNLSAPDPHAE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++ +R+ L + LIGF G+PWT+A YM+ GG D+ + + AY +
Sbjct: 121 LQYVMDAVAEIRRALDGSVPLIGFSGSPWTLACYMVEGGSSDDYRKVKSLAYSRPDLMHH 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + +YL AQI AG + +FD+ G L E ++ ++ + ++++ + R+
Sbjct: 181 ILDVTAQAVVKYLNAQIEAGAQAVMVFDSWGGVLSEAAYKEFSLPYLEQVVAGLIRERDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L++ + +A+GLDW++ + A + + +QGNLDP L
Sbjct: 241 QRVPSIVFTKGGGLWLESIAAI-GCDAVGLDWTMDIGRARRLVGDKVALQGNLDPNVLFA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +LD G+ P +FNLGHGI+ P++V LV TV +
Sbjct: 300 PPEAVATETRRVLDAFGNHPGHVFNLGHGISQYTPPESVSVLVDTVHAHS 349
>gi|55586239|ref|XP_513127.1| PREDICTED: uroporphyrinogen decarboxylase isoform 9 [Pan
troglodytes]
gi|114556193|ref|XP_001154880.1| PREDICTED: uroporphyrinogen decarboxylase isoform 8 [Pan
troglodytes]
Length = 367
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|327483196|gb|AEA77603.1| Uroporphyrinogen III decarboxylase [Vibrio cholerae LMA3894-4]
Length = 343
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 117/336 (34%), Positives = 176/336 (52%), Gaps = 6/336 (1%)
Query: 15 NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILF 74
++ P+W+MRQAGRYLPEYR R + +F+ +C E E+TLQP+RR+ DAAILF
Sbjct: 4 QPVDYTPVWMMRQAGRYLPEYRATRAQAGDFMALCKNAELASEVTLQPLRRFPLDAAILF 63
Query: 75 SDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
SDIL I DA+G +RF EGP + + + I L + ++ +RK L
Sbjct: 64 SDILTIPDAMGLGLRFAAGEGPVFERPIICKADVDKIGIPDPEGELQYVMNAVRQIRKDL 123
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGF G+PWT+A+YM+ GG K + + Y + LLD L+D YL A
Sbjct: 124 QGEVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYSEPAVLHALLDKLADSVISYLNA 183
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYM 252
QI AG + +FDT G L +++ ++ + + +I+ + R+ F K G
Sbjct: 184 QIKAGAQAVMVFDTWGGVLTPRDYQQFSLQYMHKIVDGLIRENEGRRVPVTLFTKNGGMW 243
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
L+ T +A+GLDW++ ++ A + + +QGN+DP L + + V +IL
Sbjct: 244 LEQIAA-TGCDAVGLDWTINIADAKARVGDKVALQGNMDPSILYAPAPRIREEVASILAG 302
Query: 312 LGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G G +FNLGHGI V P+N V+ V
Sbjct: 303 FGQGGTGHVFNLGHGIHLDVPPENAGVFVEAVHELS 338
>gi|62204806|gb|AAH92696.1| Urod protein [Danio rerio]
Length = 402
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 190/349 (54%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R KNF + C +PE ELTLQP+
Sbjct: 50 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KNFFETCRSPEACCELTLQPL 108
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L
Sbjct: 109 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 168
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A + LL
Sbjct: 169 VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSVTHSKAKRWLYRYPEASHKLLS 228
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV EYL+ Q+ AG +Q+F++H GCLG EF+ ++ + V+ K
Sbjct: 229 QLTDVIVEYLLGQVKAGAQALQVFESHTGCLGPVEFKEFSLPYLRDTARRVKDKIKESGL 288
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
N I FAK Y L++ +GLDW++ A + +QGN+DP L
Sbjct: 289 DNVPMIVFAKDGHYGLEDLSESA-YEVVGLDWTIDPHSARVRTGGKVSLQGNMDPCALYG 347
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 348 TKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHNHS 396
>gi|294788912|ref|ZP_06754152.1| uroporphyrinogen decarboxylase [Simonsiella muelleri ATCC 29453]
gi|294483014|gb|EFG30701.1| uroporphyrinogen decarboxylase [Simonsiella muelleri ATCC 29453]
Length = 353
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 182/351 (51%), Gaps = 9/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L L + PIW+MRQAGRYLPEYR R + F+D+C ++ E+T
Sbjct: 1 MTPLQNDTFLRALLRQPVEYTPIWMMRQAGRYLPEYRATRAQAGGFMDLCKNTDFATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
+QP+ R++ DAAILFSDIL + DA+G + F EGP+ P+ T+ D ++
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFETGEGPKFTRPVQTEADVNALRVPD--MS 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F ++S +RK L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 119 KLHYVFDAVSSIRKALNGRVPLIGFSGSPFTLACYMVEGGGSKEFRLIKTMMYSRPDLLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L + +YL QI G +QIFDT G L F+ ++ R + +II+ + R+Y
Sbjct: 179 KILSINAQAVTDYLNTQIQHGAQAVQIFDTWGGVLSHAAFQEFSLRYIQQIINGLTREYD 238
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ ++A+GLDW+ ++ A + + +QGN DP L
Sbjct: 239 GRRVPVIVFTKGGGQWLEQMAE-CGADALGLDWTTSIAQARQRVGDKVALQGNFDPFALF 297
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G+G +FNLGHGI +P++ L+ TV
Sbjct: 298 GTPERIRAEAAQILADYGAGTGHVFNLGHGINQHANPEHAKILIDTVHELS 348
>gi|305665661|ref|YP_003861948.1| uroporphyrinogen decarboxylase [Maribacter sp. HTCC2170]
gi|88710418|gb|EAR02650.1| uroporphyrinogen decarboxylase [Maribacter sp. HTCC2170]
Length = 342
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 196/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLPE+ +IRKK+ +F C TPE E+T+QPI
Sbjct: 2 KNDLFLRALKGETVERPPVWMMRQAGRYLPEFIEIRKKY-DFFTRCQTPELASEITVQPI 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY DAAILFSDILVI A+ V+ N GP + +PI TQ+ ++ P++ L+Y
Sbjct: 61 RRYGMDAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPIQTQKAVDNVIVPDVTEELDY- 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q+I + ++KL + I LIGF G+PWT+ Y + G K + + F + A + L
Sbjct: 120 --VMQAIKMTKEKLNDEIPLIGFAGSPWTILCYCVQGQGSKTFDKAKEFCFTQPVAAHQL 177
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + A
Sbjct: 178 LQKITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSFQYIQQIIDALKEE---A 234
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L + + + ++A+G+DW+ A L +QGN DP RL+
Sbjct: 235 PVIVFGKGCWFALNDMAK-SGASALGVDWTCSPKNARYLSGGNITLQGNFDPSRLLSPPA 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G ++ NLGHGI P + N + V+ K
Sbjct: 294 EIKKMVTQMINEFGKDKYVVNLGHGILPNIPLDNAKAFIDAVKEYK 339
>gi|332259244|ref|XP_003278697.1| PREDICTED: uroporphyrinogen decarboxylase [Nomascus leucogenys]
Length = 367
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLH 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|326925281|ref|XP_003208846.1| PREDICTED: uroporphyrinogen decarboxylase-like [Meleagris
gallopavo]
Length = 395
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 192/349 (55%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R ++F D C +P+ ELTLQP+
Sbjct: 42 KNDTFLRAARGEETEHTPVWCMRQAGRYLPEFRETRA-AQDFFDTCRSPKLCCELTLQPL 100
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L
Sbjct: 101 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKEVEDLLKLRQKVDVSAELGY 160
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ++++ R L + LIGF GAPWT+ SYM+ GG + + + Y++ A + LL
Sbjct: 161 VFQAVTLTRHSLEGKVPLIGFSGAPWTLMSYMVEGGGSATMAKAKSWLYRHPEASHRLLR 220
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV +YL+ Q+ AG +Q+F++HAG LG +F+ +A + I V+ K
Sbjct: 221 LLTDVVTDYLVGQVAAGAQALQLFESHAGHLGPEQFQEFALPYIRDIARDVKSKLKAEAL 280
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P I FAK A Y L++ + +GLDW++ A ++ K +QGNLDP L
Sbjct: 281 PLVPMIVFAKDAHYALRDLAQ-AGYEVVGLDWTIQPQEARAQVGKGITLQGNLDPCALYA 339
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P ++P++V V+ V +
Sbjct: 340 PKEKIGELVKKMLESFGTQRYIANLGHGLYPDMNPEHVGAFVEAVHAHS 388
>gi|148245057|ref|YP_001219751.1| uroporphyrinogen decarboxylase [Candidatus Vesicomyosocius okutanii
HA]
gi|172047234|sp|A5CVK5|DCUP_VESOH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146326884|dbj|BAF62027.1| uroporphyrinogen decarboxylase [Candidatus Vesicomyosocius okutanii
HA]
Length = 345
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 131/341 (38%), Positives = 190/341 (55%), Gaps = 7/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ L + PIW+MRQAGRYLPEYR R K +FL +C +PE E+T+QPI R++
Sbjct: 5 YINALLKKPTSRTPIWIMRQAGRYLPEYRATRAKAGDFLTLCKSPELACEVTMQPIDRFD 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL I DA+G + F+E EGP+ +PI + + N L +F
Sbjct: 65 LDAAILFSDILTIPDAMGLGLYFMEGEGPKFRNPIKN--LKDIKKISTDLNNDLSYVFDG 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S ++K L N + LIGF G+PWT+A+YMI GG + + + + A + LL L+
Sbjct: 123 VSTIKKSLNNRVPLIGFSGSPWTLATYMIEGGG-RIFASTKKMLFNDPEALHLLLMKLTK 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL QI +G D + +FDT G L E + +++ + +I+ V+ ++PN F+
Sbjct: 182 SVIAYLNQQIVSGADSVMVFDTWGGVLSEQNYLDFSLYYMAKIVKGVKAQHPNIPITLFS 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
K G L + T + +G+DW+V L E+ + +QGNLDP L +V+ V
Sbjct: 242 KNGGKYLTHIAN-TGCDGVGIDWTVELYQVQQEVGNKVAIQGNLDPAVLYATPEVIEREV 300
Query: 306 NAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L G +IFNLGHGITP VDP+NV LV V +
Sbjct: 301 KKVLSQFKGDTGYIFNLGHGITPDVDPENVKILVDCVHTFS 341
>gi|21674849|ref|NP_662914.1| uroporphyrinogen decarboxylase [Chlorobium tepidum TLS]
gi|29611777|sp|Q8KAW2|DCUP_CHLTE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21648071|gb|AAM73256.1| uroporphyrinogen decarboxylase [Chlorobium tepidum TLS]
Length = 351
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 197/350 (56%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L+ PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFIRALKRQATPRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELACEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYL 120
DAAI+FSDILV+ +A+G NV +E +G ++ P + L++P+ID L Y
Sbjct: 62 DLMGVDAAIIFSDILVVNEAMGMNVEIIETKGIKLTPPIRSQADIDKLIDPDIDEKLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + +K+L + + LIGF GA WT+ +Y + GG K++ + Y+ + + L
Sbjct: 121 --VLDAIRLAKKELNDRVPLIGFSGAAWTLFTYAVEGGGSKNYTWAKKMMYREPKMAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +SD + YL+ Q+ AG D IQIFD+ A L E ++ +A + + ++AV+ YP
Sbjct: 179 LQKISDCISAYLVKQVEAGADAIQIFDSWASALSEDDYREFALPYIKQNVAAVKAAYPEI 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I+FAK +L + ++A+GL W++ ++ A EL +QGN+DP L +
Sbjct: 239 PVIAFAKDMNTILSDIAD-CGADAVGLGWNIDIAKARKELNDRVCLQGNMDPTVLYGTPE 297
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +L G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 298 KIKSEAAKVLKQFGQHNDHSGHVFNLGHGILPDVDPANLKCLVEFVKEES 347
>gi|254000506|ref|YP_003052569.1| uroporphyrinogen decarboxylase [Methylovorus sp. SIP3-4]
gi|253987185|gb|ACT52042.1| uroporphyrinogen decarboxylase [Methylovorus sp. SIP3-4]
Length = 354
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 184/346 (53%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEYR RK +FL +C ++ E+T+QP+
Sbjct: 5 KNDTFLRALLRQPTDYTPVWMMRQAGRYLPEYRATRKNAGSFLSLCKNTDFATEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + FVE EGP+ + + ++ L +
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLYFVEGEGPKFERPVRDAAAIHKLHVPDIAADLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +RK L + LIGF G+PWT+A+YM+ G D + AY + LLD
Sbjct: 125 TDAVSQIRKTLDGRVPLIGFSGSPWTLATYMVEGQGGTDFLTIKKMAYAEPALLHHLLDI 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF- 242
++ YL AQI AG + IFD+ G L + + ++ + +I++ + ++ +
Sbjct: 185 IAQTVTLYLNAQIEAGAQAVMIFDSWGGALSHNAYREFSLAYMEKIVAGLIKQRDGSPVP 244
Query: 243 -ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F KG L+ + ++A+GLDW+V + A + + +QGN+DP L+ +
Sbjct: 245 SIVFTKGGALWLEAQAAI-GADALGLDWTVDIGEARKRVGGQVALQGNMDPAILLSTPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G G +FNLGHGIT P+N ++K V++
Sbjct: 304 IEKEVASILASYGHGHGHVFNLGHGITQHTPPENAEAMIKAVKALS 349
>gi|119386337|ref|YP_917392.1| uroporphyrinogen decarboxylase [Paracoccus denitrificans PD1222]
gi|166234266|sp|A1B852|DCUP_PARDP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119376932|gb|ABL71696.1| uroporphyrinogen decarboxylase [Paracoccus denitrificans PD1222]
Length = 342
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 147/344 (42%), Positives = 218/344 (63%), Gaps = 3/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+ IL L+G + PP+W+MRQAGRYLPEYR R + +FL +CYTP+ E+TL
Sbjct: 1 MSEK--TILRALKGERLPVPPVWMMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +T+ + L
Sbjct: 59 QPIRRYGFDAAILFADILLLPQALGLDLWFVTGEGPRLSTVTSAAGVAALKPAAAIHDTL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ IL ++LP TLIGF GAPWTVA+YM++G D F ++ AF L
Sbjct: 119 SPVYETVRILARELPRETTLIGFAGAPWTVATYMVAGRGTPDQAPAHAFKAEDRAAFAAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D +++ + +YL AQI AG +V+++FD+ AG L +F+++A RII+A++ ++P
Sbjct: 179 IDRITEATIDYLSAQIEAGAEVVKLFDSWAGSLKGRDFDDFAVEPARRIIAALKARHPGI 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + R T ++ + LD SV + A E+QK+G VQGNLDP LV G +
Sbjct: 239 PVIAFPREAGPRYAGFARATGADCVALDNSVSADWAAAEVQKDGCVQGNLDPRLLVSGGE 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I+ GP IFNLGHGITP+ DP+NV +++ +R
Sbjct: 299 ELVSETRRIVQAFSRGPHIFNLGHGITPEADPENVARMLEAIRG 342
>gi|327270967|ref|XP_003220259.1| PREDICTED: uroporphyrinogen decarboxylase-like [Anolis
carolinensis]
Length = 369
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 131/349 (37%), Positives = 191/349 (54%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L QG P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 16 KNDTFLRAAQGEETEYTPVWCMRQAGRYLPEFRETRA-AQDFFATCRSPETCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ E L L
Sbjct: 75 RRFPLDAAIIFSDILVVPQALGMEVVMVPGKGPTFPEPLKGVEDLLKLRQKVDVAAELGY 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R +L + LIGF GAPWT+ SYMI GG + + + Y++ A + LL
Sbjct: 135 VFQAITLTRHRLEGKVPLIGFSGAPWTLMSYMIEGGGSNTMAKAKAWLYRHPEASHRLLT 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY----- 237
L+DV A+YL+ Q+ AG +Q+F++HAG LG +F + + I V+ K
Sbjct: 195 LLADVIADYLVGQVAAGAQALQLFESHAGHLGPEQFSEFCLLYIRSIAKQVKTKLHENAM 254
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P I FAK A Y L++ + + + IGLDW++ A + K+ +QGNLDP L
Sbjct: 255 PVVPLIIFAKDAHYALEDLAQ-SGYDVIGLDWTIRPEDARQRIGKDITLQGNLDPCALYA 313
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +LD G+ +I NLGHG+ P + P++V V V +
Sbjct: 314 PKEKIGELVKRMLDGFGTQRYIANLGHGLYPDMSPEHVGAFVDAVHAHS 362
>gi|71051616|ref|NP_000365.3| uroporphyrinogen decarboxylase [Homo sapiens]
gi|2507533|sp|P06132|DCUP_HUMAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3660278|pdb|1URO|A Chain A, Uroporphyrinogen Decarboxylase
gi|40889566|pdb|1R3Q|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
Coproporphyrinogen-I
gi|40889572|pdb|1R3Y|A Chain A, Uroporphyrinogen Decarboxylase In Complex With
Coproporphyrinogen-Iii
gi|251836947|pdb|3GVQ|A Chain A, Urod Single-Chain Dimer
gi|251836948|pdb|3GVR|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
gi|2905794|gb|AAC03563.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|48146069|emb|CAG33257.1| UROD [Homo sapiens]
gi|49457067|emb|CAG46854.1| UROD [Homo sapiens]
gi|55959135|emb|CAI16440.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|119627412|gb|EAX07007.1| uroporphyrinogen decarboxylase, isoform CRA_a [Homo sapiens]
gi|158257186|dbj|BAF84566.1| unnamed protein product [Homo sapiens]
gi|261861380|dbj|BAI47212.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 367
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|60834750|gb|AAX37109.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 368
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|18158958|pdb|1JPH|A Chain A, Ile260thr Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 187/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 274
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I+FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMITFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 382
>gi|239998553|ref|ZP_04718477.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|240112471|ref|ZP_04726961.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|240125304|ref|ZP_04738190.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|240127757|ref|ZP_04740418.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|254493274|ref|ZP_05106445.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 1291]
gi|268594411|ref|ZP_06128578.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|268598539|ref|ZP_06132706.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|268683905|ref|ZP_06150767.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|268686148|ref|ZP_06153010.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|226512314|gb|EEH61659.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 1291]
gi|268547800|gb|EEZ43218.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae 35/02]
gi|268582670|gb|EEZ47346.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae MS11]
gi|268624189|gb|EEZ56589.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-92-679]
gi|268626432|gb|EEZ58832.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae SK-93-1035]
gi|317163828|gb|ADV07369.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 354
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|332973060|gb|EGK10997.1| uroporphyrinogen decarboxylase [Kingella kingae ATCC 23330]
Length = 354
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 182/351 (51%), Gaps = 9/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M L L ++ PIW+MRQAGRYLPEYR R + F+D+C ++ E+T
Sbjct: 1 MTPLHNDTFLRALLRQPVDYTPIWMMRQAGRYLPEYRATRAQAGGFMDLCKNTDFATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+ R++ DAAILFSDIL + DA+G + F EGP+ PI T+ D +
Sbjct: 61 IQPLERFDLDAAILFSDILTVPDAMGLGLYFETGEGPKFTKPIQTEADVNALRVPD--MA 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F ++ +R L + LIGF G+P+T+A YM+ GG K+ + Y +
Sbjct: 119 NLRYVFDAVKSIRSALNGRVPLIGFSGSPFTLACYMVEGGSSKEFRTIKTMMYSRPDLLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + YL QI G +QIFDT G L + F+ ++ R + +IIS ++R+
Sbjct: 179 KILDVNAQAVTAYLNEQIAHGAQAVQIFDTWGGVLSDVAFQAFSLRYMKQIISGLKRENE 238
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
N I F KG G L++ + + ++A+GLDW+ ++ A + + +QGN DP L
Sbjct: 239 NRCVPVIVFTKGGGQWLESMAQ-SGADALGLDWTTNIAQARARVGDKVALQGNFDPFALF 297
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G+G +FNLGHGI P++ LV TV
Sbjct: 298 GTPDAIKAEAARILADFGNGSGHVFNLGHGINQHAAPEHAKILVDTVHELS 348
>gi|251836951|pdb|3GW3|A Chain A, Human Urod Mutant K297n
Length = 367
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGNTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|146276602|ref|YP_001166761.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17025]
gi|166234279|sp|A4WPZ2|DCUP_RHOS5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145554843|gb|ABP69456.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17025]
Length = 343
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 140/341 (41%), Positives = 206/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTMLRALRGETLPTPPIWLMRQAGRYLPEYRATRAEAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVEALKGKDEIHEKLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRIT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A +II+ ++ ++P I+F
Sbjct: 183 EATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKKIIAELKARHPGLPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E ++G VQGNLDP ++ G ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAENVQKGKSCVQGNLDPKYMITGGDELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV L++T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLIETIRGK 343
>gi|163740379|ref|ZP_02147773.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis 2.10]
gi|161386237|gb|EDQ10612.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis 2.10]
Length = 348
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 150/344 (43%), Positives = 207/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K+ +L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 5 MAEQKK-LLRALAGETQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNPELATEVTL 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + + L
Sbjct: 64 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTEADFAKLGPVSDIHETL 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ +L LP TLIGF GAPWTVA+YMI+G D G + +N+ F L
Sbjct: 124 NPIYETVRLLSSALPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHLMRQENNALFEAL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +++ + EYL QI AG +V++IFD+ AG L FE YA +I A+++++P
Sbjct: 184 LARITEATIEYLSMQIKAGAEVVKIFDSWAGSLSGEAFEKYALEPCRQITEALKQRHPGI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q
Sbjct: 244 PVIGFPREAGDKYVGFAKATGVDCVALDNSVDPEWAAAHVQVDGCVQGNLASRHMVTGGQ 303
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ G+GP IFNLGHGITP DP NV ++ VR
Sbjct: 304 ELVDDTRRIVKAFGNGPHIFNLGHGITPDADPDNVQRMIDAVRG 347
>gi|18859531|ref|NP_571422.1| uroporphyrinogen decarboxylase [Danio rerio]
gi|20138048|sp|Q9PTS2|DCUP_DANRE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|6502530|gb|AAF14346.1|AF095639_1 uroporphyrinogen decarboxylase [Danio rerio]
gi|220673232|emb|CAX12678.1| uroporphyrinogen decarboxylase [Danio rerio]
Length = 369
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 191/349 (54%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 17 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KDFFETCRSPEACCELTLQPL 75
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L
Sbjct: 76 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 135
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A + LL
Sbjct: 136 VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSATHSKAKRWLYRYPEASHKLLS 195
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV EYL+ Q+ AG +Q+F++H GCLG EF+ ++ + I V+ K
Sbjct: 196 QLTDVIVEYLLGQVKAGAQALQVFESHTGCLGPVEFKEFSLPYLRDIARRVKDKIKESGL 255
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
N I FAK Y L++ +GLDW++ A + +QGN+DP L
Sbjct: 256 DNVPMIVFAKDGHYGLEDLSESA-YEVVGLDWTIDPRSARVRTGGKVSLQGNMDPCALYG 314
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 315 TKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHNHS 363
>gi|207079865|ref|NP_001129018.1| uroporphyrinogen decarboxylase [Pongo abelii]
gi|75061970|sp|Q5RDK5|DCUP_PONAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|55726782|emb|CAH90152.1| hypothetical protein [Pongo abelii]
Length = 367
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE E TLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCEPTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLECLRDPEVVASELDY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|298207311|ref|YP_003715490.1| uroporphyrinogen decarboxylase [Croceibacter atlanticus HTCC2559]
gi|83849947|gb|EAP87815.1| uroporphyrinogen decarboxylase [Croceibacter atlanticus HTCC2559]
Length = 343
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 195/347 (56%), Gaps = 13/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGRYLPE+ +++ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLKALRGESVERPPVWMMRQAGRYLPEFMELKHKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT---QEIYLLNPNIDLFLNY 119
RRY DAAILFSDILVI A+ +V GP + PI T E ++ PNID L Y
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIDVEMKPGVGPWLPTPIRTAKQVEQDVIVPNIDETLGY 121
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ +I++ ++KL N + LIGF G+PWT+ Y + G K+ + + F + A +
Sbjct: 122 ---VMDAITMTKEKLNNEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPVAAHL 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D + YL ++ GV+ +Q+FD+ G L +++ ++ + + +II A++
Sbjct: 179 LLQKITDTTIAYLKRKVETGVNAVQVFDSWGGMLSPVDYQEFSWQYIQQIIDALKDM--- 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGN 298
A I+F KG + L + + ++A+G+DW++ A + +QGN DP RL
Sbjct: 236 APVIAFGKGCWFALDEMSK-SGASALGVDWTITAENARKFTNNSITLQGNFDPTRLFSPP 294
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 295 KEIKRMVTEMIDAFGKDKYIVNLGHGILPNIPIENAGAFIEAVKEYK 341
>gi|332973015|gb|EGK10954.1| uroporphyrinogen decarboxylase [Psychrobacter sp. 1501(2011)]
Length = 368
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 199/351 (56%), Gaps = 9/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L+ L+ ++ P+W+MRQAGRYLPEY+ R + +F+ +C E+T+QP+
Sbjct: 19 KNDRLLKALRFEEVDMTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTMQPL 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DAAILFSDIL I DA+G + F EGP+ E + L +
Sbjct: 79 RRFDLDAAILFSDILTIPDAMGLGLYFETGEGPKFKRTLRTEADFNQLEPFNANDSLGYV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +RK+L + L GF G+ WT+A+YMI GG KD+ + Y + +LD
Sbjct: 139 MDAVTSIRKELNGLVPLFGFSGSAWTLATYMIEGGSSKDYRYTKGLLYSKPEFLHQILDH 198
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ +YL AQI AG ++Q+FD+ G L +F+ ++ + R++S +++++P+ +
Sbjct: 199 ITSAIIDYLDAQIVAGAQLVQLFDSWGGALAHRQFKEFSHKYNKRVVSELKQRHPDVPVV 258
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ----KEGPVQGNLDPMRLVVGNQ 299
F KG G L + + T+++ +GLDW++PL A + K+ VQGNLDP L +
Sbjct: 259 VFTKGGGLWL-DIQADTEADCLGLDWTMPLDKARAILAQSNKQIAVQGNLDPATLYGSPE 317
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ VNA+LD +G ++ NLGHGIT V+P+N + V K+
Sbjct: 318 LIRQSVNAMLDDAYAGGVKTGYVANLGHGITQWVNPENAKVFIDAVHEYKL 368
>gi|23502914|ref|NP_699041.1| uroporphyrinogen decarboxylase [Brucella suis 1330]
gi|62290910|ref|YP_222703.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 1 str. 9-941]
gi|82700821|ref|YP_415395.1| uroporphyrinogen decarboxylase [Brucella melitensis biovar Abortus
2308]
gi|161619980|ref|YP_001593867.1| uroporphyrinogen decarboxylase [Brucella canis ATCC 23365]
gi|163844084|ref|YP_001628488.1| uroporphyrinogen decarboxylase [Brucella suis ATCC 23445]
gi|189025123|ref|YP_001935891.1| uroporphyrinogen decarboxylase [Brucella abortus S19]
gi|237816416|ref|ZP_04595409.1| uroporphyrinogen decarboxylase [Brucella abortus str. 2308 A]
gi|254690199|ref|ZP_05153453.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|254696316|ref|ZP_05158144.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|254705069|ref|ZP_05166897.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|254707414|ref|ZP_05169242.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|254709044|ref|ZP_05170855.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|254731232|ref|ZP_05189810.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|256030569|ref|ZP_05444183.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|256258453|ref|ZP_05463989.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|256370464|ref|YP_003107975.1| uroporphyrinogen decarboxylase [Brucella microti CCM 4915]
gi|260546172|ref|ZP_05821912.1| uroporphyrinogen decarboxylase [Brucella abortus NCTC 8038]
gi|260567463|ref|ZP_05837933.1| uroporphyrinogen decarboxylase [Brucella suis bv. 4 str. 40]
gi|260755739|ref|ZP_05868087.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|260758963|ref|ZP_05871311.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|260760687|ref|ZP_05873030.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|260884765|ref|ZP_05896379.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|261314899|ref|ZP_05954096.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|261316542|ref|ZP_05955739.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|261755771|ref|ZP_05999480.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|265987616|ref|ZP_06100173.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|297247294|ref|ZP_06931012.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 5 str. B3196]
gi|38257629|sp|Q8FY24|DCUP_BRUSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|75505188|sp|Q57AJ2|DCUP_BRUAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123547320|sp|Q2YR07|DCUP_BRUA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189082868|sp|A9M9E9|DCUP_BRUC2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189082869|sp|B0CJG6|DCUP_BRUSI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058004|sp|B2S965|DCUP_BRUA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|23348946|gb|AAN30956.1| uroporphyrinogen decarboxylase [Brucella suis 1330]
gi|62197042|gb|AAX75342.1| HemE, uroporphyrinogen decarboxylase [Brucella abortus bv. 1 str.
9-941]
gi|82616922|emb|CAJ12023.1| Uroporphyrinogen decarboxylase (URO-D):Uroporphyrinogen
decarboxylase HemE [Brucella melitensis biovar Abortus
2308]
gi|161336791|gb|ABX63096.1| uroporphyrinogen decarboxylase [Brucella canis ATCC 23365]
gi|163674807|gb|ABY38918.1| uroporphyrinogen decarboxylase [Brucella suis ATCC 23445]
gi|189020695|gb|ACD73417.1| Uroporphyrinogen decarboxylase (URO-D) [Brucella abortus S19]
gi|237788483|gb|EEP62698.1| uroporphyrinogen decarboxylase [Brucella abortus str. 2308 A]
gi|256000627|gb|ACU49026.1| uroporphyrinogen decarboxylase [Brucella microti CCM 4915]
gi|260096279|gb|EEW80155.1| uroporphyrinogen decarboxylase [Brucella abortus NCTC 8038]
gi|260156981|gb|EEW92061.1| uroporphyrinogen decarboxylase [Brucella suis bv. 4 str. 40]
gi|260669281|gb|EEX56221.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 4 str. 292]
gi|260671119|gb|EEX57940.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675847|gb|EEX62668.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 6 str. 870]
gi|260874293|gb|EEX81362.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 9 str. C68]
gi|261295765|gb|EEX99261.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis B2/94]
gi|261303925|gb|EEY07422.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M163/99/10]
gi|261745524|gb|EEY33450.1| uroporphyrinogen decarboxylase [Brucella suis bv. 3 str. 686]
gi|264659813|gb|EEZ30074.1| uroporphyrinogen decarboxylase [Brucella pinnipedialis M292/94/1]
gi|297174463|gb|EFH33810.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 5 str. B3196]
Length = 341
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 184/341 (53%), Positives = 242/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|74318797|ref|YP_316537.1| uroporphyrinogen decarboxylase HemE [Thiobacillus denitrificans
ATCC 25259]
gi|74058292|gb|AAZ98732.1| uroporphyrinogen decarboxylase HemE [Thiobacillus denitrificans
ATCC 25259]
Length = 356
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 183/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + L L P+WLMRQAGRYLPEY R + +FL +C TP+ E+T
Sbjct: 1 MSALKNDTFLRALLRQPTEYTPLWLMRQAGRYLPEYNATRARAGDFLTLCKTPDLATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY DAAILFSDIL + DA+G + F + EGPR + E + + + ++
Sbjct: 61 LQPLARYPLDAAILFSDILTVPDAMGLGLYFSQGEGPRFERPLRDEWEIRDLSAPDPTDH 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R+ L + LIGF G+P+T+A YMI GG D+ + Y+ +
Sbjct: 121 LGYVMDAVRSIRRALDGAVPLIGFSGSPYTLACYMIEGGSSDDYRHIKTMLYRRPDLLHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + IFD+ G L H + ++ + RI+S + ++
Sbjct: 181 VLEVNTRAVTDYLNAQIEAGAQAVMIFDSWGGSLTPHGYREFSLDYMERIVSGLIKEREG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F KG G L+ ++A+GLDW++ + A + +QGNLDP L
Sbjct: 241 RRIPSIIFTKGGGNWLEAMAG-AGADAVGLDWTLDIGEARRRVGDRVALQGNLDPCALHG 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + I+D G+ P +FNLGHGI+ DP NV LV V S
Sbjct: 300 TPESIRAEAERIVDAYGNHPGHVFNLGHGISQFTDPANVAVLVDAVHSRS 349
>gi|40889567|pdb|1R3R|A Chain A, Uroporphyrinogen Decarboxylase With Mutation D86n
Length = 367
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS+ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSNILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|1322019|gb|AAC50482.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|1418944|emb|CAA61540.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151813|gb|AAD04571.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151815|gb|AAD04572.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151817|gb|AAD04573.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151819|gb|AAD04574.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151821|gb|AAD04575.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151823|gb|AAD04576.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151825|gb|AAD04577.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151827|gb|AAD04578.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151829|gb|AAD04579.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151831|gb|AAD04580.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151833|gb|AAD04581.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151835|gb|AAD04582.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151837|gb|AAD04583.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151839|gb|AAD04584.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151841|gb|AAD04585.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151843|gb|AAD04586.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151845|gb|AAD04587.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151847|gb|AAD04588.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151849|gb|AAD04589.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|4151851|gb|AAD04590.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|31323304|gb|AAP44118.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 367
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFLLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|237809333|ref|YP_002893773.1| uroporphyrinogen decarboxylase [Tolumonas auensis DSM 9187]
gi|259645159|sp|C4LAY4|DCUP_TOLAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|237501594|gb|ACQ94187.1| uroporphyrinogen decarboxylase [Tolumonas auensis DSM 9187]
Length = 355
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 128/346 (36%), Positives = 187/346 (54%), Gaps = 7/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L L ++ P+WLMRQAGRYLPEYRQ+R + +F+ +C TPE E+TLQP+R
Sbjct: 6 NDRYLRALLRQPVDRTPVWLMRQAGRYLPEYRQLRAEAGDFMTLCQTPELACEVTLQPLR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ I Q P D L +
Sbjct: 66 RFELDAAILFSDILTIPDAMGLGLTFGAGEGPKFAKTIQHQRDVDALPLPDPE-GELRYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++K L + LIGF G+PWT+A+YM+ GG K + + Y+ + + LL
Sbjct: 125 MDAVRTIKKALAQQVPLIGFSGSPWTLATYMVEGGSSKQFSRIKQMMYREPKLLHGLLSK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ +YL AQI AG D + IFDT G L +++ ++ + + I+ + R+Y
Sbjct: 185 LAASVTQYLNAQIAAGADAVMIFDTWGGVLSHQDYQEFSLQYMTAIVQGIHRQYDGRTIP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
F KG G L+ + +AIG+DW+ +S A + + +QGN+DP L + V
Sbjct: 245 VTLFTKGGGQWLEAIAA-SGCDAIGIDWTTDISAARARVGHKVALQGNMDPAVLQGDDAV 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G+G +FNLGHGITP ++P V V V
Sbjct: 304 VTAKVQEILQQYGNGSGHVFNLGHGITPDIEPARVKTFVDAVHRFS 349
>gi|114321912|ref|YP_743595.1| uroporphyrinogen decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310686|sp|Q0A4Y2|DCUP_ALHEH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114228306|gb|ABI58105.1| uroporphyrinogen decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
Length = 365
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 125/344 (36%), Positives = 190/344 (55%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L LQ ++ P+W+MRQAGRYLPEYR++R + +F+ + TPE E+TLQP+
Sbjct: 5 KNDRLLRALQRQPVDRTPVWMMRQAGRYLPEYRELRAQAGSFMKLAGTPELACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDIL I DA+G +RF+ EGP D P+ + P D + L
Sbjct: 65 RRFPLDAAILFSDILTIPDAMGLGLRFLPGEGPVFDHPVRSAADIEHLPVPDPE-DELRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A+YMI GG KD+ + + Y + LLD
Sbjct: 124 VTDAVRLIRRELDGEVPLIGFAGSPWTLATYMIEGGSSKDYRRCKAMLYDEPELLHRLLD 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + YL AQI AG I IFD+ G L + ++ + RI+ + R+
Sbjct: 184 KVAQATTAYLNAQIAAGAQAIMIFDSWGGALAHDAYRLFSLAYMERIVRNLTREADGRHV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
+ F KG G L+ T + +GLDW+ L A + +QGNLDP L +
Sbjct: 244 PVVLFTKGGGQWLEAMAA-TGCDGLGLDWTTNLGQARDRVGDRVALQGNLDPCVLYASPE 302
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V +L G GP +FNLGHGI P + P++ ++ V
Sbjct: 303 TIRNEVARVLADYGPGPGHVFNLGHGIHPAIPPEHAGAMIDAVH 346
>gi|40889570|pdb|1R3V|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86e In
Complex With Coproporphyrinogen-I
Length = 367
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS+ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSEILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|59800806|ref|YP_207518.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA
1090]
gi|293399490|ref|ZP_06643643.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae F62]
gi|75507415|sp|Q5F9N1|DCUP_NEIG1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|59717701|gb|AAW89106.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA
1090]
gi|291610059|gb|EFF39181.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae F62]
Length = 354
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRTKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMAQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|300313641|ref|YP_003777733.1| uroporphyrinogen decarboxylase [Herbaspirillum seropedicae SmR1]
gi|300076426|gb|ADJ65825.1| uroporphyrinogen decarboxylase protein [Herbaspirillum seropedicae
SmR1]
Length = 364
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+WLMRQAGRYLPEYR R + +F+ + P+Y E+TLQP+
Sbjct: 13 KNDTFLRALLRQPTDYTPMWLMRQAGRYLPEYRATRARAGSFMGLATNPDYATEVTLQPL 72
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F E EGP+ P+ + D L L
Sbjct: 73 ERYPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFQRPLRDEAAVKALRAPD--LGKLDY 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++++ +R++L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 131 VFKAVTQIRRELDGRVPLIGFSGSPWTLACYMVEGGGSDDFRLVKSMLYSRPDLMHHILR 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+D A YL AQI AG + IFDT G L + ++ ++ + +++S ++R+
Sbjct: 191 TNADAVAAYLNAQIDAGAQAVMIFDTWGGALADGVYQQFSLSYMQQVVSQLKREQGGQQV 250
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L+ + ++A+GLDW+V L A + + +QGNLDP L G+
Sbjct: 251 PVIVFTKGGGLWLEQIAAI-GADAVGLDWTVNLGQARQRVGDKVALQGNLDPNVLFAGDD 309
Query: 300 VMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ G +FNLGHGI+ P+ V LV+ V
Sbjct: 310 AIRAEVRKLLESFGRPGAGSGHVFNLGHGISQHTPPEAVTTLVQAVHEFS 359
>gi|194098096|ref|YP_002001144.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae NCCP11945]
gi|240013678|ref|ZP_04720591.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI18]
gi|240016117|ref|ZP_04722657.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA6140]
gi|240080258|ref|ZP_04724801.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|240115211|ref|ZP_04729273.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|240117497|ref|ZP_04731559.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|240120747|ref|ZP_04733709.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID24-1]
gi|240123051|ref|ZP_04736007.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|260440971|ref|ZP_05794787.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
gi|268596408|ref|ZP_06130575.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|268600891|ref|ZP_06135058.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|268603197|ref|ZP_06137364.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|268681678|ref|ZP_06148540.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|291044299|ref|ZP_06570008.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
gi|238056489|sp|B4RK59|DCUP_NEIG2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|193933386|gb|ACF29210.1| putative uroporphyrinogen decarboxylase [Neisseria gonorrhoeae
NCCP11945]
gi|268550196|gb|EEZ45215.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae FA19]
gi|268585022|gb|EEZ49698.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID18]
gi|268587328|gb|EEZ52004.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID1]
gi|268621962|gb|EEZ54362.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae PID332]
gi|291011193|gb|EFE03189.1| uroporphyrinogen decarboxylase [Neisseria gonorrhoeae DGI2]
Length = 354
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIW+MRQAGRYLPEY+ R K +FLD+C E+T+QP+
Sbjct: 5 KNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAGSFLDLCKNTGLATEVTIQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDIL + DA+G + F E EGP+ E + ++ + L +
Sbjct: 65 ERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFAHALQHESDIAKLHVP-DMEKLQYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+P+T+A YM+ GG K+ + Y +LD
Sbjct: 124 FDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGSKEFRTIKTMMYSRPDLLYKILDT 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+ YL AQI AG +QIFDT G L + F+ ++ + + +I++ ++R+
Sbjct: 184 NAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAFKEFSLKYIRQIVAGLKRESEGRRVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L++ ++ ++A+GLDW+ + A + + +QGN DP L +
Sbjct: 244 VIVFAKGGGLWLESMVQI-GADALGLDWTCNIGEARRRVGNQVALQGNFDPSALFGTPES 302
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G +FNLGHGI DP++ LV TV
Sbjct: 303 IRTEVARILTGYGHGSGHVFNLGHGINQHADPEHAKILVDTVHELS 348
>gi|313202465|ref|YP_004041123.1| uroporphyrinogen decarboxylase [Methylovorus sp. MP688]
gi|312441781|gb|ADQ85887.1| uroporphyrinogen decarboxylase [Methylovorus sp. MP688]
Length = 354
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 183/346 (52%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEYR RK +FL +C ++ E+T+QP+
Sbjct: 5 KNDTFLRALLRQPTDYTPVWMMRQAGRYLPEYRATRKNAGSFLSLCKNTDFATEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + FVE EGP+ + + ++ L +
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLYFVEGEGPKFERPVRDAAAIHKLHVPDIAADLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +RK L + LIGF G+PWT+A+YM+ G D + AY + LLD
Sbjct: 125 TDAVSQIRKTLDGRVPLIGFSGSPWTLATYMVEGQGGTDFLTIKKMAYAEPALLHHLLDI 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF- 242
+ YL AQI AG + IFD+ G L + + ++ + +I++ + ++ +
Sbjct: 185 TAQTVTLYLNAQIEAGAQAVMIFDSWGGALSHNAYREFSLAYMEKIVAGLIKQRDGSPVP 244
Query: 243 -ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F KG L+ + ++A+GLDW+V + A + + +QGN+DP L+ +
Sbjct: 245 SIVFTKGGALWLEAQAAI-GADALGLDWTVDIGEARKRVGGQVALQGNMDPAILLSTPEA 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +IL G G +FNLGHGIT P+N ++K V++
Sbjct: 304 IEKEVASILASYGHGHGHVFNLGHGITQHTPPENAEAMIKAVKALS 349
>gi|340181|gb|AAA61258.1| uroporphyrinogen decarboxylase (EC 4.1.1.37) [Homo sapiens]
Length = 367
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 187/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V ++GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPSKGPSFPEPLREEQDLEALRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|126725996|ref|ZP_01741838.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2150]
gi|126705200|gb|EBA04291.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2150]
Length = 343
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 150/341 (43%), Positives = 210/341 (61%), Gaps = 1/341 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +L VL G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQP
Sbjct: 2 TTDKTMLRVLAGETLETPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQP 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY FDAAILF+DIL++ ALG +V FV EGPR+ IT+ + + + L P
Sbjct: 62 IRRYGFDAAILFADILLVPQALGADVWFVTGEGPRLSTITSADDFGKLGPVADIDETLSP 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I+++I IL+ +LP TLIGF GAPWTVA+YMI+G D G +N F+ L+D
Sbjct: 122 IYETIKILKSELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMMENPAVFDALID 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++ + YL AQI AG +V+++FD+ AG L F Y+ RIISA++ K+PN
Sbjct: 182 RITEATIHYLSAQISAGAEVVKLFDSWAGSLSGEAFLKYSLAPAKRIISALKAKHPNTPI 241
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I+F +G G + + + T ++ I +D +A + +Q +GPVQGNL P +V G Q +
Sbjct: 242 IAFPRGGGDLNIGFAKATGADCIAIDQFTDADWAAKHVQCDGPVQGNLAPGHMVTGGQAL 301
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+D V I +GP IFNLGHGITP DP NV ++ +R
Sbjct: 302 VDEVKRIKKAFANGPHIFNLGHGITPDADPDNVQRMIDALR 342
>gi|17986285|ref|NP_538919.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|225853496|ref|YP_002733729.1| uroporphyrinogen decarboxylase [Brucella melitensis ATCC 23457]
gi|256045670|ref|ZP_05448548.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263021|ref|ZP_05465553.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 2 str.
63/9]
gi|260562971|ref|ZP_05833457.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|265992091|ref|ZP_06104648.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|23813997|sp|Q8YJT1|DCUP_BRUME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767688|sp|C0RFV3|DCUP_BRUMB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17981867|gb|AAL51183.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|225641861|gb|ACO01775.1| uroporphyrinogen decarboxylase [Brucella melitensis ATCC 23457]
gi|260152987|gb|EEW88079.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str. 16M]
gi|263003157|gb|EEZ15450.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092894|gb|EEZ17069.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 2 str.
63/9]
gi|326410062|gb|ADZ67127.1| uroporphyrinogen decarboxylase [Brucella melitensis M28]
gi|326539779|gb|ADZ87994.1| uroporphyrinogen decarboxylase [Brucella melitensis M5-90]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 185/345 (53%), Positives = 243/345 (70%), Gaps = 5/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + +L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TL
Sbjct: 1 MNLK---VLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTL 57
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L
Sbjct: 58 QPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRL 115
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF L
Sbjct: 116 EPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKL 175
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A
Sbjct: 176 LNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G
Sbjct: 236 RIIGFPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNA 295
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +GV+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 296 LDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|40889568|pdb|1R3S|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
Complex With Coproporphyrinogen-I
gi|40889569|pdb|1R3T|A Chain A, Uroporphyrinogen Decarboxylase Single Mutant D86g In
Complex With Coproporphyrinogen-Iii
Length = 367
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FS ILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSGILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|150261558|pdb|2Q71|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Enzyme
In Complex With Coproporphyrinogen-Iii
gi|151567946|pdb|2Q6Z|A Chain A, Uroporphyrinogen Decarboxylase G168r Single Mutant Apo-
Enzyme
Length = 356
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 5 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 64 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ G Q + + YQ +A + LL
Sbjct: 124 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVERGGSSTMAQAKRWLYQRPQASHQLLR 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 184 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 243
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 244 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 302
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 303 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 351
>gi|225626446|ref|ZP_03784485.1| uroporphyrinogen decarboxylase [Brucella ceti str. Cudo]
gi|260169474|ref|ZP_05756285.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
gi|261759000|ref|ZP_06002709.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
gi|225618103|gb|EEH15146.1| uroporphyrinogen decarboxylase [Brucella ceti str. Cudo]
gi|261738984|gb|EEY26980.1| uroporphyrinogen decarboxylase [Brucella sp. F5/99]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 184/341 (53%), Positives = 243/341 (71%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFSFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|332877606|ref|ZP_08445350.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332684455|gb|EGJ57308.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 340
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 189/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L VL G PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 3 QNDIFLRVLNGESTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCKTPELAAEITVQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
DAAILFSDILV+ A+ V + GP + +PI T + + P+I+ L Y
Sbjct: 62 DIVGVDAAILFSDILVVPQAMNIEVEMKKGVGPWLPNPIRTAKDVAQVIVPDIEETLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + +++L N + LIGF G+P+T+ Y + G +D + + ++ + L
Sbjct: 121 --VLEAVKLTKQRLNNRVPLIGFAGSPFTIFCYAVQGSSSRDFATAKELCFTDAATAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +QIFD+ G L ++ ++ + + +I+ A+ P
Sbjct: 179 LQKITDTTILYLKEKVKAGVDAVQIFDSWGGVLSPEDYRTFSWQYINQIVEAL---APLT 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
K I F KG + L + ++A+G+DW+ A EL + +QGN DP RL+
Sbjct: 236 KVIVFGKGCWFALPEMAA-SKASALGIDWTCSPEKARELTGGKIVLQGNFDPSRLLSSPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V ++D G +I NLGHGI P V +N + V+ V+ +
Sbjct: 295 EIKKKVKEMIDTFGKDKYIANLGHGILPNVPVENAIAFVEAVKEYR 340
>gi|78187834|ref|YP_375877.1| uroporphyrinogen decarboxylase [Chlorobium luteolum DSM 273]
gi|123729990|sp|Q3B1E7|DCUP_PELLD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78167736|gb|ABB24834.1| Uroporphyrinogen decarboxylase HemE [Chlorobium luteolum DSM 273]
Length = 351
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 189/347 (54%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR IR+K +FL +C TPE +E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAIREKT-DFLTLCKTPELAMEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G +V +E +G ++ P + + I + L +
Sbjct: 62 ELMGVDAAIIFSDILVVNEAMGMDVEIIETKGIKLTPPIRSQADINRLIIPEVQDKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I + +K L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 LDAIRLTKKVLDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V +EY+ AQ+ AG D IQIFD+ A L E ++ +A + + AV+ KYP+ I
Sbjct: 182 ISAVISEYVCAQVEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAVKAKYPDVPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L T +A+GL W + + A L +QGN+DP L + +
Sbjct: 242 VFSKDCNTILSEIAD-TGCDAVGLGWGIDIKKARTILGDRVCLQGNMDPTVLYGTPEKIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L G +FNLGHGI P VDP N+ LV+ V+ E
Sbjct: 301 AEAAKVLRQFGQHTAQSGHVFNLGHGILPDVDPANLKLLVEFVKEES 347
>gi|311103601|ref|YP_003976454.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans A8]
gi|310758290|gb|ADP13739.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans A8]
Length = 357
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEYRQ R + +F+ + PEY E+TLQP+
Sbjct: 7 KNDVFLRSLLREPVPYTPIWLMRQAGRYLPEYRQTRARAGSFMGLAQNPEYASEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R++ DAAILFSDIL + A+G + F E EGPR P+ T+E D ++ L
Sbjct: 67 ERFDLDAAILFSDILTVPHAMGLGLDFAEGEGPRFARPVRTEEDVARLEVPD--MDKLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L+
Sbjct: 125 VFDAVRTIRRDLDGKVPLIGFAGSPWTIACYMVEGQGSDDYRLIKTMLYARPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + +YL AQI AG + +FD+ G L + F+ ++ ++++ ++R++
Sbjct: 185 INAEATLQYLNAQIDAGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLKREHEGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G L+ ++A+GLDW+V L+ A + QGNLDPM L G
Sbjct: 245 PAIVFTKGGGQWLEQIAA-CGADAVGLDWTVDLAAARRRTGDSVAFQGNLDPMALFGGGP 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G G +FNLGHGI+ P+ V +LV V
Sbjct: 304 AIRAEARRVLDAFGPVGKGGHVFNLGHGISRFTPPEAVAELVDEVHQHS 352
>gi|254694689|ref|ZP_05156517.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|254700698|ref|ZP_05162526.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
gi|261215016|ref|ZP_05929297.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|261751207|ref|ZP_05994916.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
gi|260916623|gb|EEX83484.1| uroporphyrinogen decarboxylase [Brucella abortus bv. 3 str. Tulya]
gi|261740960|gb|EEY28886.1| uroporphyrinogen decarboxylase [Brucella suis bv. 5 str. 513]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ LGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHTLGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|167587924|ref|ZP_02380312.1| uroporphyrinogen decarboxylase [Burkholderia ubonensis Bu]
Length = 364
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +RR++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLRREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V + A E + +QGNLDP L
Sbjct: 246 GERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNVGAARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V +
Sbjct: 305 APPAAIREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHNHS 355
>gi|93006505|ref|YP_580942.1| uroporphyrinogen decarboxylase [Psychrobacter cryohalolentis K5]
gi|122415128|sp|Q1QA45|DCUP_PSYCK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|92394183|gb|ABE75458.1| uroporphyrinogen decarboxylase [Psychrobacter cryohalolentis K5]
Length = 378
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+TLQP+
Sbjct: 18 KNDRLLRALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY+ DAAILFSDIL I DA+G + F EGP+ PI Q P +D+ + L
Sbjct: 78 RRYDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKHPIRQQADLDRLPVLDVN-DSLDY 136
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L + L GF G+PWT+A+YMI GG KD+ + F Y N + LLD
Sbjct: 137 VMRAVTSIRTALNGQVPLFGFSGSPWTLATYMIEGGSSKDYRYTKGFLYSNPDFLHQLLD 196
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +YL AQ+ AG ++QIFD+ G LG +F +++ RI++ ++ ++P
Sbjct: 197 KLATSVIDYLDAQVVAGAQILQIFDSWGGALGHRQFIDFSHAYNKRIVAELKVRHPEIPV 256
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL---------------QKEGPVQG 287
+ F KG G L + + ++++A+GLDW++P+ A ++ Q +QG
Sbjct: 257 VLFTKGGGLWL-DIQADSEADALGLDWTMPIDRARQVLTESQRQLTKHHKKLQSSKAIQG 315
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
NLDP L + VNA+LD ++ NLGHGIT V+P N + V
Sbjct: 316 NLDPATLYGSPATIRAEVNAMLDSAYANGEKTGYVANLGHGITQWVNPDNAKVFIDAVHD 375
Query: 344 EKI 346
KI
Sbjct: 376 YKI 378
>gi|306843483|ref|ZP_07476084.1| uroporphyrinogen decarboxylase [Brucella sp. BO1]
gi|306276174|gb|EFM57874.1| uroporphyrinogen decarboxylase [Brucella sp. BO1]
Length = 341
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 240/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPI
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIH 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILARMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|148235558|ref|NP_001084556.1| uroporphyrinogen decarboxylase [Xenopus laevis]
gi|46250159|gb|AAH68896.1| MGC83088 protein [Xenopus laevis]
Length = 367
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 187/351 (53%), Gaps = 9/351 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 14 TLHNDTFLRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQ 72
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI+FSDILVI ALG +R GP +P+ T + + L
Sbjct: 73 PLRRFPLDAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLQKLRSSVDVSEEL 132
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++I++ R KL + LIGF GAPWT+ +YMI GG + + + YQ+ A + L
Sbjct: 133 GYVFRAITLTRHKLEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-- 238
L L+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 193 LKQLTDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLKDISRRVKHKLKAE 252
Query: 239 ---NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL 294
I FAK A Y L++ + +D +GLDW++ A E K +QGN+DP L
Sbjct: 253 GLNQVPMIVFAKDAHYALEDLSQ-SDYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCAL 311
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 312 YASKGDIEKTVKKMIEGFGRRGYIANLGHGLYPDMDPDHVGAFISAVHKYS 362
>gi|302877421|ref|YP_003845985.1| uroporphyrinogen decarboxylase [Gallionella capsiferriformans ES-2]
gi|302580210|gb|ADL54221.1| uroporphyrinogen decarboxylase [Gallionella capsiferriformans ES-2]
Length = 354
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 112/351 (31%), Positives = 181/351 (51%), Gaps = 7/351 (1%)
Query: 1 MN--ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN + L L P+W+MRQAGR+LPEYR R + +FL +C P++ E+
Sbjct: 1 MNFKLKNDTFLRALLRQPTEYTPLWMMRQAGRFLPEYRATRARAGSFLGLCKNPDFATEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
T+QP+ RY DAAILFSDIL + DA+G + F + EGP+ + E ++ +
Sbjct: 61 TMQPLDRYPLDAAILFSDILTVPDAMGLGLYFADGEGPKFERPLRDEAAIMALQVPDIDK 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++S +RK L + LIGF G+P+T++ YM+ GG D+ + + Y + +
Sbjct: 121 TLRYVTDAVSQIRKTLDGRVPLIGFSGSPFTLSCYMVEGGGSDDYARVKTLMYNEPKLMH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + YL AQI AG + IFD+ G L + ++ RI+ + ++
Sbjct: 181 HILEVTTQAVIAYLNAQIEAGAQAVMIFDSWGGVLSHSAYHEFSLPYTQRIVEGLIKEKD 240
Query: 239 NAKF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+ + F KG G + + T +AIGLDW++ + A ++ + +QGNLDP L
Sbjct: 241 GVRIPNVVFTKGGGLWIDSIAA-TGCDAIGLDWTMDIGVARQKVGNKVALQGNLDPAVLF 299
Query: 296 VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L G +FNLGHGI+ +P++V +V V
Sbjct: 300 ANPNAIRNEVEKVLSSYGYGSGHVFNLGHGISQHTNPEHVAAMVAAVHELS 350
>gi|88802330|ref|ZP_01117857.1| uroporphyrinogen decarboxylase [Polaribacter irgensii 23-P]
gi|88781188|gb|EAR12366.1| uroporphyrinogen decarboxylase [Polaribacter irgensii 23-P]
Length = 341
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 120/345 (34%), Positives = 197/345 (57%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE++ I+KK+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPEFQVIKKKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDILVI A+ V+ + GP + +PI TQ+ D+ + L
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIEVQMKPDFGPYLPNPIRTQKDLDRVIVPDVHHS-LGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I ++KL + I LIGF G+PWT+ Y + G K+ + + + N + LL
Sbjct: 121 VMEAIKATKEKLNDDIPLIGFAGSPWTIMCYCVQGQGSKNFDKAKELCFTNPVMAHSLLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL A++ AGV+ +QIFD+ G L +++ ++ + + +II A++ + +
Sbjct: 181 KITDTTIAYLKAKVAAGVNAVQIFDSWGGMLSPVDYKEFSWQYIQQIIDALKDE---TQV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I+F KG + L + + + + A+G+DW+ A L + +QGN DP RL+ +
Sbjct: 238 IAFGKGCWFALGDMSK-SGAAALGVDWTCSARNARYLSGGKITLQGNFDPSRLLSPPAEI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +++ G +I NLGHGI P + +N V V+ K+
Sbjct: 297 KKMVHQMINEFGKDRYIVNLGHGILPNIPVENAKAFVDAVKEYKV 341
>gi|194337695|ref|YP_002019489.1| uroporphyrinogen decarboxylase [Pelodictyon phaeoclathratiforme
BU-1]
gi|238056492|sp|B4SGD6|DCUP_PELPB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|194310172|gb|ACF44872.1| uroporphyrinogen decarboxylase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 351
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 188/347 (54%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELATEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G NV +E++G ++ P + + + L +
Sbjct: 62 ELMGVDAAIIFSDILVVNEAMGMNVEIIESKGIKLTPPIRSQADIDKLIVPDIDEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ + +++L N + LIGF GA WT+ +Y + GG K++ + Y+ + LL
Sbjct: 122 LDALRMTKRELDNRVPLIGFTGAAWTLFTYAVEGGGSKNYAYAKKMMYREPAMAHALLGK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S V Y++ QI AG D IQIFD+ A L E ++ YA + + A++ KYP+ I
Sbjct: 182 ISGVITAYVLKQIEAGADAIQIFDSWASALSEDDYREYALPYIKDTVQAIKAKYPDTPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L + T A+GL W + + A EL +QGNLDP L +
Sbjct: 242 VFSKDCNTILSDIAD-TGCEAMGLGWGIDIGKARAELGDRVALQGNLDPTVLYGTPDRIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G +FNLGHGI P +DP+N+ LV+ V+ E
Sbjct: 301 AEASKILKSFGQHTEHSGHVFNLGHGILPDMDPENLKLLVEFVKEES 347
>gi|40889571|pdb|1R3W|A Chain A, Uroporphyrinogen Decarboxylase Y164f Mutant In Complex
With Coproporphyrinogen-Iii
Length = 367
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ ++M+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTFMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|71066057|ref|YP_264784.1| uroporphyrinogen decarboxylase [Psychrobacter arcticus 273-4]
gi|123648302|sp|Q4FRK8|DCUP_PSYA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71039042|gb|AAZ19350.1| putative uroporphyrinogen decarboxylase [Psychrobacter arcticus
273-4]
Length = 378
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 199/363 (54%), Gaps = 22/363 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+TLQP+
Sbjct: 18 KNDRLLRALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTLQPL 77
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY+ DAAILFSDIL I DA+G + F EGP+ PI Q P +D+ + L
Sbjct: 78 RRYDLDAAILFSDILTIPDAMGLGLYFEAGEGPKFKHPIRQQADLDRLPVLDVN-DSLDY 136
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L + L GF G+PWT+A+YMI GG KD+ + F Y N + LLD
Sbjct: 137 VMRAVTSIRTALNGQVPLFGFSGSPWTLATYMIEGGSSKDYRYTKGFLYSNPEFLHQLLD 196
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +YL AQ+ AG ++QIFD+ G LG +F +++ RI++ ++ ++P
Sbjct: 197 KLATSVIDYLDAQVVAGAQILQIFDSWGGALGHRQFVDFSHAYNKRIVAELKVRHPEIPV 256
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ---------------KEGPVQG 287
+ F KG G L + + ++++A+GLDW++P+ A ++ +QG
Sbjct: 257 VLFTKGGGLWL-DIQADSEADALGLDWTMPIDRARQVLTESQRQLTKQHKKLHSSKAIQG 315
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
NLDP L + VNA+LD ++ NLGHGIT V+P N + V
Sbjct: 316 NLDPATLYGSPATIRAEVNAMLDSAYANGEKTGYVANLGHGITQWVNPDNAKVFIDAVHD 375
Query: 344 EKI 346
KI
Sbjct: 376 YKI 378
>gi|319944944|ref|ZP_08019206.1| uroporphyrinogen decarboxylase [Lautropia mirabilis ATCC 51599]
gi|319741514|gb|EFV93939.1| uroporphyrinogen decarboxylase [Lautropia mirabilis ATCC 51599]
Length = 369
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 122/361 (33%), Positives = 182/361 (50%), Gaps = 17/361 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L+G V + P+WLMRQAGRYLPEY R + +F+ +C TPE E+TL
Sbjct: 1 MSTKNDTFLRALRGQVTDYTPVWLMRQAGRYLPEYNATRARAGSFMALCKTPELACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ R+ DAAILFSDIL I DA+ + F + EGPR + E + L
Sbjct: 61 QPLARFPLDAAILFSDILTIPDAMNLGLSFQQGEGPRFERTIRHEDDVKALFAPDPTQEL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L + LIGF G+PWT+A YM+ G D + YQ + +
Sbjct: 121 RYVLDAVRTIRQALDGRVPLIGFAGSPWTLACYMVEGRGGTDFHTIKTMMYQRPDLLHRV 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---- 236
L+ + YL AQI AG + IFDT G L + ++ ++ + RI+S +
Sbjct: 181 LEINARAVTNYLNAQIEAGAQAVMIFDTWGGILADGPYQRFSLAYMRRILSELTPYRKER 240
Query: 237 -------YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGN 288
+ I F KG L+ + ++AIG+DW++ L+ A + +QGN
Sbjct: 241 NEKGETVLESVPTILFTKGGAPWLEALAA-SGADAIGIDWTMNLATARKRVGPTCVLQGN 299
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
LDPM L+ + + + V LD G +FNLGHGI+ P++V LV+TV
Sbjct: 300 LDPMALLTSPEQVREQVVRTLDSYGAANTGRGHVFNLGHGISQFTPPEHVSVLVETVHEH 359
Query: 345 K 345
Sbjct: 360 S 360
>gi|260467194|ref|ZP_05813371.1| uroporphyrinogen decarboxylase [Mesorhizobium opportunistum
WSM2075]
gi|259029047|gb|EEW30346.1| uroporphyrinogen decarboxylase [Mesorhizobium opportunistum
WSM2075]
Length = 343
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 178/340 (52%), Positives = 234/340 (68%), Gaps = 2/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + +L+VL+G I PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI
Sbjct: 3 QNRIMLDVLKGKAIFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ FDA+ILFSDILV+ ALGR+VRF E GP + PI+ EI L D+F L P+
Sbjct: 63 ERFGFDASILFSDILVVPHALGRDVRFEEGRGPLLTPISAAEILAL--ESDVFHVNLEPV 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ LR +LP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL
Sbjct: 121 YETVRRLRARLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPAAFKQLLKV 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D SA YLI QI AG DV+QIFD+ +G L + FE + V I+ VR +P+ I
Sbjct: 181 LADHSAAYLIRQIEAGADVVQIFDSWSGVLDDASFEQFCVEPVAEIVRQVRAVHPDVPVI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ++YR T +G+DW+VPL+ A +LQ+ G VQGNLDP+RLV G + + D
Sbjct: 241 GFPKGAGARYQSYREKTGVAGLGIDWTVPLAAAKDLQRSGAVQGNLDPLRLVAGGKALSD 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV+AIL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 301 GVDAILGALGDGPLIFNLGHGITPETPVAHVEAMVKLVRS 340
>gi|260574198|ref|ZP_05842203.1| uroporphyrinogen decarboxylase [Rhodobacter sp. SW2]
gi|259023664|gb|EEW26955.1| uroporphyrinogen decarboxylase [Rhodobacter sp. SW2]
Length = 343
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 145/339 (42%), Positives = 206/339 (60%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGR+LPEYR R + +FL +CY E E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRFLPEYRATRAQAGDFLSLCYNSELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAI+F+DIL++ ALG ++ F EGPRM TT E D +L PI++
Sbjct: 63 YGFDAAIVFADILLLPQALGADLWFETGEGPRMSTTTTMEAVKALKPADAIHEHLAPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF G PWTVA+YMI+G KD + F LLD ++
Sbjct: 123 TVRILRRELPTETTLIGFAGNPWTVATYMIAGRGSKDQAAAHALKAADRATFAALLDRIA 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + EYL Q+ AG +VI++FD+ AG L +F ++A RIIS ++ ++P I+F
Sbjct: 183 DATIEYLSMQVDAGAEVIKLFDSWAGSLKGQDFTDFAVAPTKRIISELKARHPGLPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + + T ++ + LD SV +A E +Q +G VQGN+DP+ +V G + +
Sbjct: 243 PREAGNGYIGFAKATGADCVALDNSVTPEWAAENVQVDGCVQGNMDPIHMVTGGAALDEA 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ +GP IFNLGHGITP DP+NV +++ VR
Sbjct: 303 TRRVVKAFKNGPHIFNLGHGITPDADPENVTRMIEVVRG 341
>gi|312882830|ref|ZP_07742563.1| uroporphyrinogen decarboxylase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369522|gb|EFP97041.1| uroporphyrinogen decarboxylase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 354
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C + E+T
Sbjct: 1 MSEIKNDRYLRALMRQPVDHTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAQLASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D + + I
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLELRFAAGEGPVFDKPIKNKADIERIGIPDPEVE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YMI GG K + + Y + +
Sbjct: 121 LQYVMNAVRQIRKDLQGEVPLIGFSGSPWTLATYMIEGGSSKAFTKIKKMMYAEPQLLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L++ EYL AQI AG + IFDT G L ++ ++ + + +I+ + R+
Sbjct: 181 LLDKLANSVIEYLNAQIKAGAQSVMIFDTWGGVLTPRDYNLFSLQYMHKIVDGLIRENDG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
F K G L+ T +A+GLDW+V ++ A + + +QGN+DP L
Sbjct: 241 RRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTVNIADAKARIGDKVALQGNMDPSMLYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V++IL+ G G +FNLGHGI V P+N V V
Sbjct: 300 SPERIREEVSSILEGFGKGTGHVFNLGHGIHLDVPPENAGVFVNAVHELS 349
>gi|294851295|ref|ZP_06791968.1| uroporphyrinogen decarboxylase [Brucella sp. NVSL 07-0026]
gi|294819884|gb|EFG36883.1| uroporphyrinogen decarboxylase [Brucella sp. NVSL 07-0026]
Length = 341
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G G +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGALVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|254495633|ref|ZP_05108555.1| uroporphyrinogen decarboxylase [Legionella drancourtii LLAP12]
gi|254355203|gb|EET13816.1| uroporphyrinogen decarboxylase [Legionella drancourtii LLAP12]
Length = 362
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 131/348 (37%), Positives = 196/348 (56%), Gaps = 4/348 (1%)
Query: 1 MNERKQKI-LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + Q + + L+ + PIW+MRQAGRYLPEYR+IR++ +FL +C PE E+T
Sbjct: 11 MYDLNQSLFIRALRRQPVERTPIWMMRQAGRYLPEYRKIREQAGDFLSLCKNPELACEVT 70
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RRY DAAILFSDIL I DA+G + F E EGP + + N + +
Sbjct: 71 LQPLRRYAMDAAILFSDILTIPDAMGLGLYFSEGEGPCFNHPVQDIQAIKNLQVPDVGDS 130
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ ++R+++P + LIGF G+PWT+A YM+ G +D + Y A +
Sbjct: 131 LAYVMNAVRLIRQEMPAELPLIGFAGSPWTLACYMVEGRSSRDFKRILKLIYTQPEAAHL 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+ YL+ QI+AGVD + IFDT G L ++ ++ R + +II ++ +P+
Sbjct: 191 LLHKLALSVGNYLVEQINAGVDAVMIFDTWGGVLTPANYQEFSLRYMHQIIQYIKTTHPD 250
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
I F KG G L+ +T +A+GLDW+ L A + + +QGNLDP L+
Sbjct: 251 VPVILFTKGGGQWLEKML-ITGCDALGLDWTCDLGDARQRVGAQVALQGNLDPAVLLTSE 309
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L G G +FNLGHGITP V P++V +V+ V
Sbjct: 310 HCVREHVQKVLASFGHGSGHVFNLGHGITPDVPPEHVAAMVEAVHEFS 357
>gi|153873153|ref|ZP_02001827.1| Uroporphyrinogen decarboxylase (URO-D) [Beggiatoa sp. PS]
gi|152070381|gb|EDN68173.1| Uroporphyrinogen decarboxylase (URO-D) [Beggiatoa sp. PS]
Length = 358
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 5/348 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + L L ++ P+W+MRQAGRYLPEYR+ R K K+FL +C TPE E+TLQ
Sbjct: 3 SLKNDRFLRALLRQPVDMTPVWMMRQAGRYLPEYRETRAKTKDFLTLCQTPELACEVTLQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+RR+ DAAILFSDIL I +A+G + F E EGP+ + + + L
Sbjct: 63 PLRRFPLDAAILFSDILTIPEAMGLGLYFSEGEGPKFERPVRTHAEVEKLGVPDPNEALR 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ ++R +L + LIGF G+PWT+A+YM+ GG K+ + + +++ + LL
Sbjct: 123 YVMDAVRLIRHELAGEVPLIGFSGSPWTLATYMVEGGTTKNFSKIKGLMFEHPNTMHLLL 182
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D L+ YL AQI AG I IFDT G L ++ N++ + + RI++ + R+Y
Sbjct: 183 DKLAQAVTAYLNAQIAAGAQAIMIFDTWGGILTSRDYLNFSLQYMQRIVAGLTREYEGQR 242
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F K L++ T +A+GLDW +P+ E + + +QGN++P L
Sbjct: 243 VPVILFTKDGNEWLEDIAA-TGCDAVGLDWKLPIGVVRERIGDKVALQGNMEPSILYASP 301
Query: 299 QVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G G +FNLGHGI P ++P++V V+ V +
Sbjct: 302 ERIRKEVATILASFGHGNGHVFNLGHGIHPDIEPEHVSAFVEAVHTLS 349
>gi|254713530|ref|ZP_05175341.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
gi|254716115|ref|ZP_05177926.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261217885|ref|ZP_05932166.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261321265|ref|ZP_05960462.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
gi|260922974|gb|EEX89542.1| uroporphyrinogen decarboxylase [Brucella ceti M13/05/1]
gi|261293955|gb|EEX97451.1| uroporphyrinogen decarboxylase [Brucella ceti M644/93/1]
Length = 341
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGI PQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGIIPQAPIENVQRMIDRVRGGK 340
>gi|319953179|ref|YP_004164446.1| uroporphyrinogen decarboxylase [Cellulophaga algicola DSM 14237]
gi|319421839|gb|ADV48948.1| Uroporphyrinogen decarboxylase [Cellulophaga algicola DSM 14237]
Length = 341
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 196/346 (56%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLPE+ +I+K++ +F C TP+ E+T+QPI
Sbjct: 3 KNDLFLRALKGEIVERPPVWMMRQAGRYLPEFMEIKKEY-DFFTRCQTPDLASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYL 120
RR+ DAAILFSDILVI A+ V+ + GP + +PI TQ+ ++ P++D+ L+Y
Sbjct: 62 RRFGMDAAILFSDILVIPQAMNIEVQMKPDFGPYLPNPIRTQKDVDAVIVPDVDVALDY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I ++KL N I LIGF G+PWT+ Y + G K+ + + F + A + L
Sbjct: 121 --VMKAIKATKEKLNNEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFMQPLAAHQL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL A++ AGV+ +QIFD+ G L ++ ++ + +II A++ +
Sbjct: 179 LQKITDTTIAYLKAKVKAGVNAVQIFDSWGGMLSPTDYTEFSWNYIQQIIDALKEE---T 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L + + + + A+G+DW+ A L +QGN DP RL+
Sbjct: 236 PVIVFGKGCWFALGDMAK-SGAAALGVDWTCSARNARYLTGGNITLQGNFDPSRLLSPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G ++ NLGHGI P V N + V+ K
Sbjct: 295 DIKRMVTQMINEFGKDKYVVNLGHGILPNVPVDNARAFIDAVKEYK 340
>gi|148559474|ref|YP_001259871.1| uroporphyrinogen decarboxylase [Brucella ovis ATCC 25840]
gi|166234232|sp|A5VT24|DCUP_BRUO2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148370731|gb|ABQ60710.1| uroporphyrinogen decarboxylase [Brucella ovis ATCC 25840]
Length = 341
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 184/341 (53%), Positives = 242/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRLVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|149925414|ref|ZP_01913678.1| uroporphyrinogen decarboxylase [Limnobacter sp. MED105]
gi|149825531|gb|EDM84739.1| uroporphyrinogen decarboxylase [Limnobacter sp. MED105]
Length = 364
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 182/353 (51%), Gaps = 12/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEYR R K NF+ +C PE E+TLQP+
Sbjct: 8 KNDTFLRALRREATEYTPVWLMRQAGRYLPEYRATRAKAGNFMGLCTNPEAACEVTLQPL 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F E EGP+ + E + + L +
Sbjct: 68 ERYKLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPLVTEADVAKLAVPDIGTSLRYV 127
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +R L + LIGF G+PWT+A YM+ GG D + + Y+ + +L+
Sbjct: 128 TDAVSTIRGALGGRVPLIGFSGSPWTLACYMVEGGGSSDFRKVKTMLYKRPDLMHRILEV 187
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY------ 237
++ ++YL AQI AG + IFD+ G L + F+ ++ V +I++++ +
Sbjct: 188 TTEAVSQYLRAQIEAGAQAVMIFDSWGGALADGAFQKFSLNYVKKIVASLPLQANRGSFT 247
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
+ I F KG G L++ + ++A+G+DW+V L A + +QGNLDP L
Sbjct: 248 EDIPSIVFTKGGGLWLEDIAS-SGASAVGVDWTVNLGQARARIGDRCAIQGNLDPNVLFA 306
Query: 297 GNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V L+ G +FNLGHGI+ +P +V +V V +
Sbjct: 307 EPAQIEAEVAKALESFGVPQAGAGHVFNLGHGISQFTNPDSVEVMVNAVHAYS 359
>gi|301768142|ref|XP_002919490.1| PREDICTED: uroporphyrinogen decarboxylase-like [Ailuropoda
melanoleuca]
Length = 367
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 183/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ K
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKRVKAKLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHRHS 361
>gi|56477020|ref|YP_158609.1| uroporphyrinogen decarboxylase [Aromatoleum aromaticum EbN1]
gi|81677487|sp|Q5P4Q4|DCUP_AZOSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56313063|emb|CAI07708.1| Uroporphyrinogen decarboxylase [Aromatoleum aromaticum EbN1]
Length = 356
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 119/346 (34%), Positives = 183/346 (52%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEY + R++ +FLD+C +P E+TLQP+
Sbjct: 5 QNDTFLRALLRQPTDYTPLWMMRQAGRYLPEYCETRRRAGSFLDLCKSPALACEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAILFSDIL + DA+G + F E EGPR + E + N L +
Sbjct: 65 ARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPRFERPLRDEWEIRNLVAPDPHAELQYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +R+ L + LIGF G+PWT+A YM+ GG D+ + + AY + +L
Sbjct: 125 MDAVAEIRRALGGSVPLIGFSGSPWTLACYMVEGGSSDDYRRIKTMAYTRPDLLHHVLRV 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+D YL AQI +G + +FD+ G L E + ++ + R+++ + R+
Sbjct: 185 TADSVVAYLNAQIESGAQAVMVFDSWGGVLSEAAYREFSLPYLERVVAGLIRERDGERIP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L++ + +A+GLDW++ + A + + +QGNLDP L +
Sbjct: 245 SIVFTKGGGLWLESIAAI-GCDAVGLDWTMDIGRARALVGDKVALQGNLDPAILFAPPET 303
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G P +FNLGHGI+ P+ V LV TV
Sbjct: 304 IATEAKRVLDAFGPHPGHVFNLGHGISQFTPPEAVSVLVDTVHQHS 349
>gi|18158960|pdb|1JPK|A Chain A, Gly156asp Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF APWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFADAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 274
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 382
>gi|251836949|pdb|3GVV|A Chain A, Single-Chain Urod Y164g (Gy) Mutation
gi|281500764|pdb|3GVW|A Chain A, Single-Chain Urod F217y (Yf) Mutation
Length = 367
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q++++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLYESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|308321680|gb|ADO27991.1| uroporphyrinogen decarboxylase [Ictalurus furcatus]
Length = 369
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 197/349 (56%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G + P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 16 KNDTFLRAARGEEVEHVPVWCMRQAGRYLPEFREFRAG-KDFFETCRSPEDCCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+FSDILV+ ALG +V+ V +GP +P+ + + + L
Sbjct: 75 RRFPFDAAIIFSDILVVPQALGMDVQMVAGKGPTFPEPLKEPDDLQRLRSKVDVASELGY 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I++ R KL + LIGF GAPWT+ SYMI G H + + + Y++ A + LL
Sbjct: 135 VFRAITLTRHKLEGKVPLIGFSGAPWTLMSYMIESGGSTTHSKAKRWLYRHPEASHALLK 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV +YL+ Q+ AG +Q+F++HAGCLG EF+ +A + I V+ +
Sbjct: 195 RLTDVIVDYLLGQVKAGAQALQVFESHAGCLGPVEFKVFALPYLRDIARRVKDRLKESGL 254
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
N I FAK Y L++ + + +GLDW++ A + + +QGN DP L
Sbjct: 255 DNVPMIVFAKDGHYALEDLSQ-SHYEVVGLDWTIDPCVARQRTGGKVSLQGNTDPCALYA 313
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +++ G+ +I NLGHG+ P +DP++V V+ V +
Sbjct: 314 TKECISEIVKTMVEAFGTRGYIANLGHGLYPDMDPESVGAFVEAVHTHS 362
>gi|296207791|ref|XP_002750795.1| PREDICTED: uroporphyrinogen decarboxylase [Callithrix jacchus]
Length = 367
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPTVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMAYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG H F +A + + V+ +
Sbjct: 194 ILTDALIPYLVGQVVAGAQALQLFESHAGHLGPHLFNKFALPYIRDVAKRVKARLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ M V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEMGQLVKQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHRHS 361
>gi|317404548|gb|EFV84955.1| uroporphyrinogen decarboxylase [Achromobacter xylosoxidans C54]
Length = 357
Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 184/349 (52%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEYR+ R + +F+ + P+Y E+TLQP+
Sbjct: 7 KNDVFLRALLREPVPYTPIWLMRQAGRYLPEYRETRARAGSFMGLAQNPDYASEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R++ DAAILFSDIL + A+G + F E EGPR P+ T++ D ++ L
Sbjct: 67 ERFDLDAAILFSDILTVPHAMGLGLDFAEGEGPRFARPVRTEDDVARLAVPD--MDKLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L+
Sbjct: 125 VFDAVGTIRRDLDGKVPLIGFAGSPWTIACYMVEGQGSDDYRLIKTMLYSRPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + +YL AQI AG + +FD+ G L + F+ ++ ++++ + R++
Sbjct: 185 INAEATLQYLNAQIAAGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLTREHEGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G L++ +A+GLDW+V L+ A + QGNLDPM L G
Sbjct: 245 PAIVFTKGGGQWLEDIAA-CGCDAVGLDWTVDLAAARRRTGDCVAFQGNLDPMALFGGAD 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G G +FNLGHGI+ P V +LV V
Sbjct: 304 AIRAEARRVLDAFGPVGKGGHVFNLGHGISRFTPPDAVAELVDEVHRHS 352
>gi|160871970|ref|ZP_02062102.1| uroporphyrinogen decarboxylase [Rickettsiella grylli]
gi|159120769|gb|EDP46107.1| uroporphyrinogen decarboxylase [Rickettsiella grylli]
Length = 356
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 193/349 (55%), Gaps = 6/349 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + L ++ PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+TL
Sbjct: 1 MKNSPYRFIRALLKQPVDRTPIWIMRQAGRYLPEYRTVRRKAGDFLTLCKTPELACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP++R+N DAAI+FSDIL I DA+G + FVE EGP+ + Q I + L
Sbjct: 61 QPLQRFNLDAAIIFSDILTIPDAMGLGLYFVEGEGPQFRK-SLQTISDIKALSIPDPTDL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + R++L + LIGF G+PWT+A YM+ GG +D + R YQ + ++L
Sbjct: 120 NYVMDAIRLTRQELKGKVPLIGFAGSPWTLACYMVEGGSSRDFIKIRSLLYQEVKTLHYL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L+ L+ YL AQI AGV I IFDT G L ++ ++ + +I++ ++ +
Sbjct: 180 LNSLTQAIILYLRAQIKAGVQTIMIFDTWGGLLTPATYQEFSLEYMTQIVTNLKNNFEEK 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVG 297
I F KG L+ + +AIGLDW++ + A + K+ +QGN+DP L+
Sbjct: 240 IPIILFTKGGNLWLEKIA-TSGCDAIGLDWTMEIGAARQRVKDKKIALQGNMDPAVLLGN 298
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V IL G+G IFNLGHGI+ P+NV ++ V
Sbjct: 299 AKTIRREVKHILQSYGNGSGHIFNLGHGISQYTPPENVNIMINAVHEWS 347
>gi|254509694|ref|ZP_05121761.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium KLH11]
gi|221533405|gb|EEE36393.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium KLH11]
Length = 345
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 151/345 (43%), Positives = 205/345 (59%), Gaps = 1/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L L G V + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MMAETKTLLRALAGEVQDVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + ++ L
Sbjct: 61 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITQQSDFDALKPVEDIHETL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ IL + LP+ TLIGF GAPWTVA+YMI+G D G +N+ F L
Sbjct: 121 APVYETVRILSRALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALREENTALFEAL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ + EYL AQI AG +V++IFD+ AG L F+ YA I AV+ ++P
Sbjct: 181 LDRITAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFQKYAVEPCRTITQAVKARHPGI 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A E +Q + VQGNL +V G Q
Sbjct: 241 PVIGFPRQAGAGYVGFAKATGVDCVALDNSVSPDWAAENVQTDVCVQGNLASSHMVTGGQ 300
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
++D I+ GP IFNLGHGITP DP NV ++ TVR +
Sbjct: 301 ALVDETRQIIKAFSKGPHIFNLGHGITPDADPGNVQLMIDTVRGK 345
>gi|213514810|ref|NP_001133714.1| Uroporphyrinogen decarboxylase [Salmo salar]
gi|209155050|gb|ACI33757.1| Uroporphyrinogen decarboxylase [Salmo salar]
Length = 368
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 128/348 (36%), Positives = 195/348 (56%), Gaps = 8/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGRYLPE+R+ R K+F C +P ELTLQP+
Sbjct: 16 KNDAFLLACRGRETPHVPVWCMRQAGRYLPEFRESRAG-KDFFATCRSPAACCELTLQPL 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+FSDILVI A+G +V+ V +GP DP+ E LL + L
Sbjct: 75 RRFPFDAAIIFSDILVIPQAMGMDVQMVAGKGPTFPDPLKEPEDLLLLQSKVDVNKELGY 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I++ R KL + LIGF GAPWT+ +YMI GG + + + Y++ A + LL
Sbjct: 135 VFKAITLTRHKLEGKVPLIGFTGAPWTLMTYMIEGGGSTTQSKAKRWLYRHPEASHQLLK 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSV----GRIISAVRRKYP 238
L+D+ EYL+ Q+ AG +Q+F++HAGCLG EF ++ + ++ ++
Sbjct: 195 MLTDIIVEYLLGQVAAGAQALQVFESHAGCLGPVEFREFSLPYLRDIARKVKDQLKESGQ 254
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
+ I FAK Y L++ + + +GLDW+V A E + +QGN+DP L
Sbjct: 255 DVPLIVFAKDGHYGLEDLSQ-SHYEVVGLDWTVDPRSARERTGGKVSLQGNMDPCALYAP 313
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 314 KERISEIVKKMLEGFGTRGYIANLGHGLYPDMDPENVGAFVEAVHTHS 361
>gi|59891403|ref|NP_001012341.1| uroporphyrinogen decarboxylase [Ovis aries]
gi|75064956|sp|Q8HY31|DCUP_SHEEP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27527067|emb|CAC82649.1| uroporphyrinogen decarboxylase [Ovis aries]
Length = 367
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMSQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVSKRVKAGLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGKLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|260072644|gb|ACX30542.1| uroporphyrinogen-III decarboxylase [uncultured SUP05 cluster
bacterium]
gi|269468640|gb|EEZ80280.1| uroporphyrinogen-III decarboxylase [uncultured SUP05 cluster
bacterium]
Length = 344
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 129/341 (37%), Positives = 193/341 (56%), Gaps = 6/341 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ L ++ PIW+MRQAGRYLPEYR RKK +F+ +C PE E+T+QP+ R++
Sbjct: 5 YINALLKKPVSRTPIWVMRQAGRYLPEYRATRKKAGDFMSLCKNPELACEVTMQPMDRFD 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL I DA+G + F E EGP+ + PI T P+ N L +F +
Sbjct: 65 LDAAILFSDILTIPDAMGLGLYFSEGEGPKFERPIQTLADIEAIPS--EVNNDLTYVFDA 122
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S ++ L LIGF G+PWT+A+YMI GG K + + + + + + LLD L+D
Sbjct: 123 VSTIKSALGARAPLIGFSGSPWTLATYMIEGGSSKTFAKTKAMLFNDPKMLHLLLDKLAD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL Q+ +GVD + +FDT G L + + +++ + +I++ V+ K+PN F+
Sbjct: 183 SVIAYLDQQVQSGVDSLMVFDTWGGVLSKSNYLDFSLSYMQKIVNGVKAKHPNTPITLFS 242
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
K G L T + +G+DW+V LS ++ + +QGNLDP + +V+ V
Sbjct: 243 KNGGKHLSEIAD-TGCDGVGIDWTVELSEVEQQIGSKVAIQGNLDPAVMYATPEVVRVEV 301
Query: 306 NAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L G +FNLGHGITP VDP+N+ LV +V
Sbjct: 302 KKVLSQFKGDTGHVFNLGHGITPDVDPENMKVLVDSVHEFS 342
>gi|281351923|gb|EFB27507.1| hypothetical protein PANDA_008123 [Ailuropoda melanoleuca]
Length = 359
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 183/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 7 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 66 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELGY 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 126 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ K
Sbjct: 186 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKRVKAKLQEAGL 245
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 246 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCALYA 304
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 305 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHRHS 353
>gi|18158959|pdb|1JPI|A Chain A, Phe232leu Mutant Of Human Urod, Human Uroporphyrinogen Iii
Decarboxylase
Length = 388
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 36 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 95 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 155 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F A + + V+ +
Sbjct: 215 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKLALPYIRDVAKQVKARLREAGL 274
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 275 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 334 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 382
>gi|225010399|ref|ZP_03700871.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-3C]
gi|225005878|gb|EEG43828.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-3C]
Length = 343
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 119/346 (34%), Positives = 199/346 (57%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G ++ PP+W+MRQAGRYLPE+ +++ K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLKALRGETVSRPPVWMMRQAGRYLPEFMELKDKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
RRY D AILFSDILVI A+ V N GP + PI Q+ ++ P+I L Y
Sbjct: 62 RRYGMDVAILFSDILVIPQAMNIEVEMKPNFGPYLPHPIRDQKAVDQVIVPDIQETLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I + ++KL + + LIGF G+PWT+ Y + G K+ + + F + A + L
Sbjct: 121 --VMEAIKMTKEKLNDEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPIAAHTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL A++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ + A
Sbjct: 179 LQKITDTTIAYLKAKVAAGVNAVQVFDSWGGMLSPTDYQEFSWQYIQQIIDALKEE---A 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L+ + + + A+G+DW+ A L + +QGN DP RL+ +
Sbjct: 236 PVIAFGKGCWFALREMSQ-SGAAALGVDWTCSAQNARYLSGGKITLQGNFDPSRLMSPPK 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ ++D G +I NLGHGI P + +N ++ V+ K
Sbjct: 295 TIKRMVHEMIDAFGKDRYIVNLGHGILPNIPLENAGAFIEAVKEYK 340
>gi|311259434|ref|XP_003128097.1| PREDICTED: uroporphyrinogen decarboxylase-like [Sus scrofa]
Length = 367
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 180/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEVCCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPATVASELDY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSNTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKRVKAGLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARDRVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVQQMLSDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHRHS 361
>gi|256112390|ref|ZP_05453311.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
gi|265993827|ref|ZP_06106384.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
gi|262764808|gb|EEZ10729.1| uroporphyrinogen decarboxylase [Brucella melitensis bv. 3 str.
Ether]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 185/345 (53%), Positives = 243/345 (70%), Gaps = 5/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + +L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TL
Sbjct: 1 MNLK---VLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTL 57
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L
Sbjct: 58 QPIRRFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRL 115
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF L
Sbjct: 116 EPVYETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKL 175
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ L+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A
Sbjct: 176 LNDLADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
+ I F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G
Sbjct: 236 RIIGFPKGAGMLYAGYREKTSVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNA 295
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +GV+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 296 LDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|256060031|ref|ZP_05450213.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
gi|261324007|ref|ZP_05963204.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
gi|261299987|gb|EEY03484.1| uroporphyrinogen decarboxylase [Brucella neotomae 5K33]
Length = 341
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGA WTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAAWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|21232275|ref|NP_638192.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767592|ref|YP_242354.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990708|ref|YP_001902718.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. B100]
gi|23813977|sp|Q8P6X1|DCUP_XANCP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81306428|sp|Q4UX89|DCUP_XANC8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|229484077|sp|B0RQC7|DCUP_XANCB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21114039|gb|AAM42116.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572924|gb|AAY48334.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732468|emb|CAP50662.1| Uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
campestris]
Length = 354
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 186/352 (52%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL I DA+G + FVE EGP+ P+ + D+ L
Sbjct: 63 ERFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDADAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + + LL
Sbjct: 122 VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPQLLHHLLS 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIAQELERGSGEERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + A+G+DW++ L+ A E +QGNLDP L
Sbjct: 242 PLVLFGKGNGAYVSELAA-SGAEAVGVDWTISLADAAERAGGRVALQGNLDPATLYGSPD 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P +V LV+ V++
Sbjct: 301 AIRSEVGKTLDSYAYGNGGSREGHVFNLGHGMSPDMNPDHVGVLVEAVQTLS 352
>gi|57032914|gb|AAH88815.1| urod protein [Xenopus (Silurana) tropicalis]
Length = 367
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 187/348 (53%), Gaps = 9/348 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+R
Sbjct: 17 NDTFLRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI+FSDILVI ALG +R GP +P+ T + + L +
Sbjct: 76 RFPLDAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEELGYV 135
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL
Sbjct: 136 FRAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQ 195
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YP 238
L+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 196 LTDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAEGLD 255
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
I FAK A Y L++ + + +GLDW++ A E K +QGN+DP L
Sbjct: 256 QVPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYAS 314
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 315 KEDIEKTVKKMIEGFGQRGYIANLGHGLYPDMDPDHVGAFISAVHKYS 362
>gi|284041332|ref|YP_003391262.1| uroporphyrinogen decarboxylase [Spirosoma linguale DSM 74]
gi|283820625|gb|ADB42463.1| uroporphyrinogen decarboxylase [Spirosoma linguale DSM 74]
Length = 339
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 176/343 (51%), Gaps = 5/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + P+W+MRQAGR LP+YR +R++ +F+ + TPE E+T+
Sbjct: 1 MTLQNDLLLRTARGELTERVPVWMMRQAGRVLPQYRAVRERAGSFITLAKTPELAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ ++ DAAI+FSDILV+ +A+G +E+ GP + L + + + L
Sbjct: 61 QPVDAFDVDAAIIFSDILVVPEAMGLPYEMIESRGPVFPTTVRNQADLSHLRVADAESDL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + +K+L N + LIGF GAP+T+ YM G K + Y + + L
Sbjct: 121 GYVLDAIKLTKKELNNRVPLIGFAGAPFTIFCYMTEGKGSKTFSVAKKLLYTDPNFAHAL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL AQI AGVD++QIFD+ AG L ++ ++ + +I +
Sbjct: 181 LQQITDSTIAYLQAQIRAGVDLVQIFDSWAGILSPEQYRTFSLPYIKQICDVISE----V 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
FAKGA + +L+ + +GLDW++ + L + +QGNLDP L
Sbjct: 237 PVTVFAKGAFFARHEIGQLS-CDVVGLDWNMDPKESRALVPDRVLQGNLDPCVLYADFAQ 295
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L G +I NLGHGI P DP V V+
Sbjct: 296 IRAEAKQMLSDFGHQHYIANLGHGIYPDTDPDKARCFVDAVKE 338
>gi|107024486|ref|YP_622813.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia AU 1054]
gi|116688135|ref|YP_833758.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia HI2424]
gi|105894675|gb|ABF77840.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia AU 1054]
gi|116646224|gb|ABK06865.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia HI2424]
Length = 392
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 131/356 (36%), Positives = 189/356 (53%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 32 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 91
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 92 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEETLG 151
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 152 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 208
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +
Sbjct: 209 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQL 268
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 269 KREHDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLD 327
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + V A+LD G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 328 PTILFAPPAAVREQVRAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 383
>gi|329663263|ref|NP_001192487.1| uroporphyrinogen decarboxylase [Bos taurus]
gi|297473251|ref|XP_002686475.1| PREDICTED: uroporphyrinogen decarboxylase [Bos taurus]
gi|296488965|gb|DAA31078.1| uroporphyrinogen decarboxylase [Bos taurus]
Length = 367
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLQDPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMSQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVSKRVKAGLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGKLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|78188113|ref|YP_378451.1| uroporphyrinogen decarboxylase [Chlorobium chlorochromatii CaD3]
gi|123580558|sp|Q3AUB7|DCUP_CHLCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78170312|gb|ABB27408.1| Uroporphyrinogen decarboxylase HemE [Chlorobium chlorochromatii
CaD3]
Length = 351
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 186/347 (53%), Gaps = 7/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIW+MRQAGRYLPEYR +R+K +FL +C TPE E+T+QP+
Sbjct: 3 KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKT-DFLTLCKTPELATEVTIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILV+ +A+G+ V +E +G ++ P + + + L +
Sbjct: 62 ELVGVDAAIIFSDILVVNEAMGQEVNIIETKGIKLAPPIRSQADIDKLIVPDIDEKLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ + +K+L N + LIGF GA WT+ +Y + GG K++ + Y+ + + LL
Sbjct: 122 LDALRMTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAYAKQMMYREPQMAHSLLSK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+S Y + QI AG D IQIFD+ A L E ++ YA + + A++ K+P I
Sbjct: 182 ISQTITAYTLKQIEAGADAIQIFDSWASALSEDDYREYALPYIKDTVQAIKAKHPETPVI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F+K +L + T +A+GL W + +S A EL +QGNLDP L + +
Sbjct: 242 VFSKDCNTILSDIAD-TGCDAVGLGWGIDISKARTELNDRVALQGNLDPTVLYGTQERIK 300
Query: 303 DGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL G +FNLGHGI P +DP N+ LV+ V+ E
Sbjct: 301 IEAGKILKSFGQHNHHSGHVFNLGHGILPDMDPDNLRCLVEFVKEES 347
>gi|221202172|ref|ZP_03575207.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2M]
gi|221208767|ref|ZP_03581766.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2]
gi|221171399|gb|EEE03847.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2]
gi|221177966|gb|EEE10378.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD2M]
Length = 364
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P++ E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDFATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ Y+ + R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHE 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V + A E + +QGNLDP L
Sbjct: 246 GQRVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPAVVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|79160119|gb|AAI08076.1| Uroporphyrinogen decarboxylase [Danio rerio]
Length = 369
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 129/349 (36%), Positives = 190/349 (54%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G I P+W MRQAGRYLPE+R+ R K+F + C +PE ELTLQP+
Sbjct: 17 RNDTFLRAARGEEIEHIPVWCMRQAGRYLPEFRESRAG-KDFFETCRSPEACCELTLQPL 75
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+FSDILV+ A+G V+ +GP +P+ E + L
Sbjct: 76 RRFPFDAAIIFSDILVVPQAMGMEVQMCPGKGPTFPEPLKEPEDLQRLKTQVDVYSELDY 135
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I++ R K+ + LIGF GAPWT+ SYMI GG H + + + Y+ A + LL
Sbjct: 136 VFKAITLTRHKIEGKVPLIGFTGAPWTLMSYMIEGGGSVTHSKAKRWLYRYPEASHKLLS 195
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+DV EYL+ Q+ AG +Q+F+ H GCLG EF+ ++ + I V+ K
Sbjct: 196 QLTDVIVEYLLGQVKAGAQALQVFEPHTGCLGPVEFKEFSLPYLRDIARRVKDKIKESGL 255
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
N I FAK Y L++ +GLDW++ A + +QGN+DP L
Sbjct: 256 DNVPMIVFAKDGHYGLEDLSESA-YEVVGLDWTIDPRSARVRTGGKVSLQGNMDPCALYG 314
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V +L+ G+ +I NLGHG+ P +DP+NV V+ V +
Sbjct: 315 TKESISEIVRRMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHNHS 363
>gi|78043006|ref|YP_359341.1| uroporphyrinogen decarboxylase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123576901|sp|Q3AEU3|DCUP_CARHZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77995121|gb|ABB14020.1| uroporphyrinogen decarboxylase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 350
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 127/344 (36%), Positives = 186/344 (54%), Gaps = 8/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + P+WLMRQAGRY+ EY +IR K+ +FL+MC TPE VE+TLQP+R
Sbjct: 2 NDTFLKACRRENTPYTPVWLMRQAGRYMAEYMEIRNKY-SFLEMCKTPELAVEVTLQPVR 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILF+DIL+ + +G RF +EGP + +P+ T I + +
Sbjct: 61 KLGVDAAILFADILLPLEGMGIGFRFARDEGPVIENPVRTIVDVKKVRVITPE-EDVPYV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I ILR++L + LIGF GAP+T+ASY+I GG K++ Q + ++ A++ LL
Sbjct: 120 LEAIKILRRELAGKVPLIGFSGAPFTLASYIIEGGGSKNYIQCKRLMWEAPEAWHELLGK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + YL AQI AG +Q+FD+ G L ++E Y + ++ I
Sbjct: 180 IAESTVRYLKAQIAAGAQAVQVFDSWVGTLSPEDYEKYVLPHSKYVFDNLKET--GVPVI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
FA AG ML+ + IGLDW V L A + + + VQGNLDP+ L +V+
Sbjct: 238 HFANNAGSMLE-LVAAAGGDVIGLDWRVSLDRAWQTVGFDRGVQGNLDPVALFAPKEVIR 296
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL G P IFNLGHGI + +N LV+ V
Sbjct: 297 QKVKEILIKAGKRPGHIFNLGHGIHKETPVENAQYLVEVVHELS 340
>gi|159045245|ref|YP_001534039.1| uroporphyrinogen decarboxylase [Dinoroseobacter shibae DFL 12]
gi|189083004|sp|A8LIJ7|DCUP_DINSH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157913005|gb|ABV94438.1| uroporphyrinogen decarboxylase [Dinoroseobacter shibae DFL 12]
Length = 344
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 153/344 (44%), Positives = 211/344 (61%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +RK+ +L L G V PPIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MTDRKK-LLRSLDGEVQKVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL+I DALG ++ FV EGPR+ I T E + D ++L
Sbjct: 60 QPIRRYGFDAAILFADILLIPDALGADLWFVTGEGPRLSTIETMEEFNKLKPADEVHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP LIGF GAPWTVA+YMI+G D + F+ L
Sbjct: 120 APIYETVRILSRELPAETALIGFAGAPWTVATYMIAGRGTPDQAPAHKLMREAPEVFDAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L++ + YL QI AG + ++IFD+ AG L F YA +II+A++ K+P+
Sbjct: 180 MDRLTEATIAYLSMQIEAGAETVKIFDSWAGSLKGEAFTKYALEPTKKIIAALKTKHPDT 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + + T ++ + LD SV ++A E +Q +G VQGNL +V G Q
Sbjct: 240 PIIAFPREAGDGYIGFAKATGADCVALDNSVSAAWAAEHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ GP IFNLGHGITP DP+NV ++ TVRS
Sbjct: 300 ALVDETREIVQAFSKGPHIFNLGHGITPDADPENVQLMIDTVRS 343
>gi|171315820|ref|ZP_02905051.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MEX-5]
gi|171099009|gb|EDT43794.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MEX-5]
Length = 375
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 132/356 (37%), Positives = 188/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 75 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 134
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 135 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 191
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +
Sbjct: 192 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQL 251
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 252 KREHDGERVPVITFTKGGGLWLEEIA-STGVDAVGLDWTVNLGAARERVAGRVALQGNLD 310
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P IFNLGHGI+ P +V +LV V S
Sbjct: 311 PAILFAPPAAVREQARAVLDSYGNHPGHIFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|83313649|ref|YP_423913.1| uroporphyrinogen decarboxylase [Magnetospirillum magneticum AMB-1]
gi|123540224|sp|Q2VYH1|DCUP_MAGSA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82948490|dbj|BAE53354.1| Uroporphyrinogen decarboxylase [Magnetospirillum magneticum AMB-1]
Length = 346
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 154/346 (44%), Positives = 206/346 (59%), Gaps = 2/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L G + PPP WLMRQAGRYLPEYR R + +FLD+CY + E+TL
Sbjct: 1 MSSSSKPFLRALAGETLTPPPFWLMRQAGRYLPEYRATRAEAGSFLDLCYNSDLACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY FDAAILFSDILV+ DAL ++V F E EGP + PI + E ++ ++L
Sbjct: 61 QPLRRYGFDAAILFSDILVVPDALRQHVAFKEGEGPVLTPIRSAEDLS-GLDLSGLHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ L +P LIGF GAPWTVA+YMI G KD + + + F L
Sbjct: 120 APVYETVKKLSAAIPKTTALIGFAGAPWTVATYMIEGSGSKDFAKAKGMMFGQPELFARL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L + +YLI QI G + IQIFDT AG L E FE + + ++ +R + P
Sbjct: 180 MALLVQATGDYLIRQIDNGAEAIQIFDTWAGALPEDMFERWVIGTTRTLVERIRTERPGV 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAGY+ K Y T + + LD SVPL + A ELQ + VQGNLDP+ LV G +
Sbjct: 240 PVIGFPRGAGYLYKRYVAETKVSGVSLDPSVPLHWAAAELQPKCTVQGNLDPLLLVAGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ +L L GPFIFNLGHGITP P NV L + V+ K
Sbjct: 300 ALDAGIDRVLKALSKGPFIFNLGHGITPPTPPDNVARLAERVKGWK 345
>gi|172044378|sp|A4JA40|DCUP_BURVG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 364
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 129/353 (36%), Positives = 186/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYLL 121
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+ID L Y
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDETLGY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 125 -VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R+++ ++R+
Sbjct: 184 MHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKRE 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP
Sbjct: 244 HDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTI 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + A+LD G+ P +FNLGHGI+ P +V +LV V
Sbjct: 303 LFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHGYS 355
>gi|134294243|ref|YP_001117978.1| uroporphyrinogen decarboxylase [Burkholderia vietnamiensis G4]
gi|134137400|gb|ABO53143.1| uroporphyrinogen decarboxylase [Burkholderia vietnamiensis G4]
Length = 375
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 129/353 (36%), Positives = 186/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 18 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLD 77
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYLL 121
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+ID L Y
Sbjct: 78 RFPLDAAILFSDILTIPDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDETLGY-- 135
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 136 -VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDL 194
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R+++ ++R+
Sbjct: 195 MHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKRE 254
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP
Sbjct: 255 HDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLDPTI 313
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + A+LD G+ P +FNLGHGI+ P +V +LV V
Sbjct: 314 LFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHGYS 366
>gi|325919810|ref|ZP_08181803.1| uroporphyrinogen decarboxylase [Xanthomonas gardneri ATCC 19865]
gi|325549724|gb|EGD20585.1| uroporphyrinogen decarboxylase [Xanthomonas gardneri ATCC 19865]
Length = 354
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M PE E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPEIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ + L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETD-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLS 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVSELAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V++
Sbjct: 301 AIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQTLS 352
>gi|148653397|ref|YP_001280490.1| uroporphyrinogen decarboxylase [Psychrobacter sp. PRwf-1]
gi|172048531|sp|A5WFU9|DCUP_PSYWF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148572481|gb|ABQ94540.1| uroporphyrinogen decarboxylase [Psychrobacter sp. PRwf-1]
Length = 368
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 124/351 (35%), Positives = 196/351 (55%), Gaps = 9/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L+ L+ I+ P+W+MRQAGRYLPEY+ R + +F+ +C E+T+QP+
Sbjct: 19 KNDRLLKALRFEPIDTTPVWMMRQAGRYLPEYKATRAEAGDFMSLCKDTARATEVTMQPL 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY DAAILFSDIL I DA+G + F EGP+ E + L +
Sbjct: 79 RRYELDAAILFSDILTIPDAMGLGLYFETGEGPKFKRTLRTEADFNQLEAFNAADSLSYV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +RK+L + L GF G+ WT+A+YMI GG KD+ + Y + +LD
Sbjct: 139 MDAVTSIRKELNGKVPLFGFSGSAWTLATYMIEGGSSKDYRYTKGLLYSKPEFLHQILDH 198
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ +YL AQI AG ++Q+FD+ G L +F ++ + R+++ +++++P +
Sbjct: 199 ITTAIIDYLDAQIVAGAQIVQLFDSWGGALAHRQFAEFSHKYNKRVVAELKQRHPEVPVV 258
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ----KEGPVQGNLDPMRLVVGNQ 299
F KG G L + + ++++ +GLDWS+PL A + ++ VQGNLDP L +
Sbjct: 259 VFTKGGGLWL-DVQMDSEADCLGLDWSMPLDKARAILATGKRKIAVQGNLDPATLYGSPE 317
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ VNA+LD +G +I NLGHGIT VDPKN V V K+
Sbjct: 318 LIRQSVNAMLDDAYAGGEKTGYIANLGHGITQWVDPKNAGVFVDAVHEYKL 368
>gi|163737210|ref|ZP_02144628.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis BS107]
gi|161389814|gb|EDQ14165.1| uroporphyrinogen decarboxylase [Phaeobacter gallaeciensis BS107]
Length = 344
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 150/344 (43%), Positives = 207/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K+ +L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQKK-LLRALAGETQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNPELATEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + + L
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTEADFAKLGPVSDIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ +L LP+ TLIGF GAPWTVA+YMI+G D G + +N+ F L
Sbjct: 120 NPIYETVRLLSSALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHLLRQENNPLFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +++ + EYL QI AG +V++IFD+ AG L FE YA +I A++ ++P
Sbjct: 180 LARITEATIEYLSMQIKAGAEVVKIFDSWAGSLRGEAFEKYALEPCRQITEALKERHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGDKYVGFAKATGVDCVALDNSVDPEWAAAHVQVDGCVQGNLASRHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D I+ G+GP IFNLGHGITP DP NV ++ VR
Sbjct: 300 ELVDDTRRIVKAFGNGPHIFNLGHGITPDADPDNVQRMIDAVRG 343
>gi|114705850|ref|ZP_01438753.1| uroporphyrinogen decarboxylase [Fulvimarina pelagi HTCC2506]
gi|114538696|gb|EAU41817.1| uroporphyrinogen decarboxylase [Fulvimarina pelagi HTCC2506]
Length = 339
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 186/343 (54%), Positives = 242/343 (70%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ERK +++VL+G + PPPIWLMRQAGRYLPEYR+ R + FLD+CY P++ E+TL
Sbjct: 1 MAERK--LVKVLEGETVGPPPIWLMRQAGRYLPEYRETRAQAGGFLDLCYNPDFATEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDA+ILFSDILVI DAL R V+FV+ EGP M+PI EI L+P++ +L
Sbjct: 59 QPIRRFGFDASILFSDILVIPDALQRGVKFVKGEGPMMNPIRPDEIDRLDPSLAET--HL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP TLIGFCGAPWTVA+YMI+G D R+F Y N A L
Sbjct: 117 APVIATVARLREELPEETTLIGFCGAPWTVATYMIAGHGTPDQAPARMFGYHNPEAMAQL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+++SA+YLI Q+ AG D +QIFD+ AG L E F +YA V I+ VR P+A
Sbjct: 177 LTLLAEMSADYLIRQLRAGADCVQIFDSWAGVLDEQSFADYAVAPVKLIVDRVRAAIPDA 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I FAKGAGY LK YR+ T +A+G+DW VPL+FA ELQ +G VQGNLDP+RL+ G +
Sbjct: 237 KIIGFAKGAGYRLKTYRQETGVDALGMDWQVPLAFAKELQADGAVQGNLDPLRLIAGGRA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+ IL+ L GPFIFNLGHGITP ++V L+K +R
Sbjct: 297 LDEGVDLILEALSDGPFIFNLGHGITPDAPIEHVERLLKRIRG 339
>gi|330797190|ref|XP_003286645.1| uroporphyrinogen decarboxylase [Dictyostelium purpureum]
gi|325083393|gb|EGC36847.1| uroporphyrinogen decarboxylase [Dictyostelium purpureum]
Length = 360
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 183/342 (53%), Gaps = 3/342 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ +G + PIW+MRQAGRYLPE++ +R +F +C TPE ++TLQP+
Sbjct: 11 KNDVFLKACKGEDVPYVPIWIMRQAGRYLPEFKSVRADV-DFFSVCRTPELACKVTLQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAI+FSDILV+ A+G V+ + +GP +P+ L
Sbjct: 70 DRFPLDAAIIFSDILVVPQAMGLEVQMIPGKGPHFPNPVKEISDLSRVKYPVNVNEELGY 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++++ RK L + LIGF GAPWT+ +Y I GG + ++ + Y++ + + L
Sbjct: 130 VFDALTLTRKNLQGRVPLIGFSGAPWTLMTYCIEGGGGSNMATSKGWLYKHPKEAHEFLS 189
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ V +YL+ QI AG +QIFD+ + L F+ + + +I ++ +P
Sbjct: 190 KITRVCIDYLLGQIKAGAQALQIFDSWSNELSPALFKEFCLPYLVQIGKELKAAHPEIPL 249
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAKG+ + L++ + + +GLDW++ S A + + +QGNLDP L G+QV+
Sbjct: 250 ICFAKGSNFALEDLSKSGAYDVLGLDWTIEPSVARQMVGDRVSLQGNLDPCVLYCGDQVI 309
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L G+ +I NLGHG+ P + VK V
Sbjct: 310 REETEKMLKSFGTKRYIANLGHGMHPTHPIEGPESFVKAVHE 351
>gi|126733456|ref|ZP_01749203.1| uroporphyrinogen decarboxylase [Roseobacter sp. CCS2]
gi|126716322|gb|EBA13186.1| uroporphyrinogen decarboxylase [Roseobacter sp. CCS2]
Length = 344
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 142/341 (41%), Positives = 210/341 (61%), Gaps = 1/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPI
Sbjct: 3 QQKTILRALAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT+ + + + L P+
Sbjct: 63 RRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITSADELAKLKPTEAIHDTLNPV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F+ +++
Sbjct: 123 YETVKILSRELPDETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKSENRPVFDGIINR 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ + YL QI AG + +++FD+ AG L +F NY+ + + RII+A++ K+P I
Sbjct: 183 LTEGTIAYLSKQIDAGAECVKLFDSWAGSLQGDDFTNYSIKPMQRIIAALKEKHPGVPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GAG T ++ + +D V ++ A +Q +G VQGNL +V G ++
Sbjct: 243 AFPRGAGTKYVGVHAATGADCVAVDDGVDAAWVAQNVQNDGCVQGNLKSSHMVTGGDALV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I D L GP IFNLGHGITP +P+NV ++ TVR
Sbjct: 303 SETRRICDALSGGPHIFNLGHGITPDANPENVQLMIDTVRG 343
>gi|296137546|ref|YP_003644788.1| uroporphyrinogen decarboxylase [Thiomonas intermedia K12]
gi|295797668|gb|ADG32458.1| uroporphyrinogen decarboxylase [Thiomonas intermedia K12]
Length = 364
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 187/353 (52%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ + P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+
Sbjct: 7 NDTFLRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAQNPHFATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G +RF EGP+ D P+ T+ D ++ L +
Sbjct: 67 RYALDAAILFSDILTVPDAMGLGLRFEAGEGPKFDRPLRTEADVAALAVPD--MDKLRYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D+ + Y +
Sbjct: 125 FDAVSEIRRALVQNGTQRVPLIGFSGSPWTLACYMVEGGGSDDYRTVKTMLYSRPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP- 238
+L ++ A+YL AQI AG + IFD+ G L + F+ ++ ++I+A++++ P
Sbjct: 185 ILAVNAEAVAQYLAAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYSRQVIAALKQRAPQ 244
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
+ I F KG G L+ T ++A+GLDW+ L+ A + + +QGNLDP L
Sbjct: 245 TDVPVILFTKGGGQWLEAMAD-TGADALGLDWTTSLAQARARVGQLVALQGNLDPNVLFA 303
Query: 297 GNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHGI+ P++V LV+ V +
Sbjct: 304 PPAAIEKEVQRLLHSFGPVGVGAGHVFNLGHGISQFTPPEHVSALVEAVHTHS 356
>gi|189351936|ref|YP_001947564.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
gi|189335958|dbj|BAG45028.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
Length = 364
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ Y+ + R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V + A E + +QGNLDP L
Sbjct: 246 GQRVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPAVVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|254474454|ref|ZP_05087840.1| uroporphyrinogen decarboxylase [Ruegeria sp. R11]
gi|214028697|gb|EEB69532.1| uroporphyrinogen decarboxylase [Ruegeria sp. R11]
Length = 344
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K+ +L L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQKK-LLRALAGETQDVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ IT++ + + L
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITSEADFAKLGPVSDIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F L
Sbjct: 120 NPIYETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALREENKALFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +++ + EYL QI AG +V++IFD+ AG L F YA +I +A++ +YP+
Sbjct: 180 LARITEATIEYLSMQIDAGAEVVKIFDSWAGSLKGEAFAKYALEPCRQITAALKERYPHI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGDKYVGFAKATGIDCVALDNSVDPEWAAANVQVDGCVQGNLASRHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ID I+ +GP IFNLGHGITP DP NV ++ TVR+
Sbjct: 300 DLIDETRRIVAAFKNGPHIFNLGHGITPDADPDNVQLMIDTVRN 343
>gi|167571754|ref|ZP_02364628.1| uroporphyrinogen decarboxylase [Burkholderia oklahomensis C6786]
Length = 364
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RYPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ + R++S ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L++ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEDIAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPETIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|86139101|ref|ZP_01057672.1| uroporphyrinogen decarboxylase [Roseobacter sp. MED193]
gi|85824332|gb|EAQ44536.1| uroporphyrinogen decarboxylase [Roseobacter sp. MED193]
Length = 344
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 152/344 (44%), Positives = 209/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K+ IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAEQKK-ILRALAGETQDVPPIWMMRQAGRYLPEYRATRAQAGDFLKLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ I+T+ + + L
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTISTEADFAKLGPVSDIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F L
Sbjct: 120 NPIYETVKILSRELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKQENRPLFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +++ + +YL QI AG +V++IFD+ AG L +F YA I +A+++++P
Sbjct: 180 LARITEATIDYLSKQIEAGAEVVKIFDSWAGSLKGEDFRKYALEPCREITAALKQRHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A + LQ +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGEKYLGFAKETGIDCLALDNSVDPLWAAQNLQVDGCVQGNLASRHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D AI+ +GP IFNLGHGITP DP NV ++ TVR
Sbjct: 300 DLVDETRAIVQAFKNGPHIFNLGHGITPDADPDNVQLMIDTVRG 343
>gi|91215568|ref|ZP_01252539.1| uroporphyrinogen decarboxylase [Psychroflexus torquis ATCC 700755]
gi|91186520|gb|EAS72892.1| uroporphyrinogen decarboxylase [Psychroflexus torquis ATCC 700755]
Length = 340
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 110/346 (31%), Positives = 192/346 (55%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGRYLP++ +++ K+ +F C T E E+T+ PI
Sbjct: 3 KNDLFLKALRGETVERPPVWMMRQAGRYLPDFMKLKAKY-DFFTRCRTSELATEITVMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYL 120
+ DAAILFSDILV+ A+ V+ N GP + +PI ++ ++ P++ L Y
Sbjct: 62 HQVGTDAAILFSDILVVPQAMNIEVQMKPNFGPWLPNPIRDRKSLDQVIVPDVYEELGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++++I + +K+L + + LIGF G+PWT+ Y + G K+ + + F + + + L
Sbjct: 121 --VYEAIKMTKKELNDEVPLIGFAGSPWTIFCYCVQGQGSKNFDKAKEFCFTEPQMAHEL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +Q+FD+ G L +++ ++ + +II A++
Sbjct: 179 LQKITDTTIAYLKGKVEAGVDAVQVFDSWGGMLSPVDYQEFSWPYIQQIIDALKDM---I 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I+F KG + L + + ++A+G+DW+ A L +QGN DP RL +
Sbjct: 236 PVIAFGKGCWFALDVMAK-SGASALGVDWTCSGRNARYLSGGNITLQGNFDPSRLFSPPK 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ ++D G +I NLGHGI P + +N V+ V+ K
Sbjct: 295 DIKRMVHEMIDEFGKDRYIVNLGHGILPNIPVENAKAFVEAVKEYK 340
>gi|23014739|ref|ZP_00054541.1| COG0407: Uroporphyrinogen-III decarboxylase [Magnetospirillum
magnetotacticum MS-1]
Length = 346
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 157/346 (45%), Positives = 204/346 (58%), Gaps = 2/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + L L G + PPP WLMRQAGRYLPEYR R + +FLD+CY + E+TL
Sbjct: 1 MSSPSKPFLRALAGETLTPPPFWLMRQAGRYLPEYRATRAEAGSFLDLCYNSDLACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY FDAAILFSDILV+ DAL ++V F E EGP + PI + E +I ++L
Sbjct: 61 QPLRRYGFDAAILFSDILVVPDALRQHVAFKEGEGPVLTPIRSAEDLS-GLDISGLHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++ ++ L +P LIGF GAPWTVA+YMI G KD + + + F L
Sbjct: 120 APVYDTVKKLSAAIPKTTALIGFAGAPWTVATYMIEGSGSKDFAKAKTMMFGQPELFARL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + +YLI QI G + IQIFDT AG L E FE + ++ +R + P
Sbjct: 180 MDLLVRATGDYLIRQIDNGAEAIQIFDTWAGALPEDMFERWVIGPTRALVERIRAERPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAG + K Y T + + LD SVPL + A ELQ VQGNLDP+ LV G +
Sbjct: 240 PVIGFPRGAGILYKRYVTETKVSGVSLDPSVPLDWAAAELQPLCTVQGNLDPLLLVAGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ IL VL GPFIFNLGHGITP P NV L + V+ K
Sbjct: 300 ALDSGIDRILKVLSKGPFIFNLGHGITPPTPPDNVARLAERVKGWK 345
>gi|13473780|ref|NP_105348.1| uroporphyrinogen decarboxylase [Mesorhizobium loti MAFF303099]
gi|23814012|sp|Q98DY6|DCUP_RHILO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|14024531|dbj|BAB51134.1| uroporphyrinogen decarboxylase [Mesorhizobium loti MAFF303099]
Length = 343
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 176/340 (51%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + +L+VL+G PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI
Sbjct: 3 KSRIMLDVLKGEAHFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ FDA+ILFSDILV+ ALGR+VRF E GP + PI+ EI L D+F L P+
Sbjct: 63 ERFGFDASILFSDILVVPHALGRDVRFEEGRGPLLTPISVAEIMAL--ESDVFHVNLEPV 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ LR KLP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL
Sbjct: 121 YETVRRLRAKLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPAAFQHLLKV 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D SA YLI QI AG DV+QIFD+ +G L + F+ + V I+ V+ +P+ I
Sbjct: 181 LADHSAAYLIRQIEAGADVVQIFDSWSGVLDDASFDQFCVWPVAEIVRQVQAVHPDVPII 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG + YR+ T +G+DW+VPL+ A +LQ+ G VQGNLDP+RLV G + + D
Sbjct: 241 GFPKGAGARYRTYRQKTGVTGLGIDWTVPLAAAKDLQRSGAVQGNLDPLRLVAGGKALSD 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV AIL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 301 GVEAILKALGDGPLIFNLGHGITPETPIAHVEAMVKQVRS 340
>gi|254464838|ref|ZP_05078249.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium Y4I]
gi|206685746|gb|EDZ46228.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium Y4I]
Length = 344
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 147/340 (43%), Positives = 207/340 (60%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++K+L L G + PPIW+MRQAGRYLPEYR R + +FL +CY + E+TLQPIR
Sbjct: 4 QKKLLRALAGEKQDVPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLAAEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
RY FDAAILF+DIL+I ALG ++ FV EGPR+ ITT + L PI+
Sbjct: 64 RYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITTDADFAKLGPASDIHETLNPIY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL +
Sbjct: 124 ETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHRLREENTALFEALLARI 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + +YL QI AG +V++IFD+ AG L +FE YA +I +A+++++P I
Sbjct: 184 TEATIDYLSKQIEAGAEVVKIFDSWAGSLKGADFEKYALEPCRQITAALKQRHPGIPVIG 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q ++D
Sbjct: 244 FPREAGEKYVGFAKATGVDCVALDNSVDPEWAAANVQVDGCVQGNLASRHMVTGGQDLVD 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I++ +GP IFNLGHGITP DP NV ++ TVR
Sbjct: 304 ETRRIVEAFQNGPHIFNLGHGITPDADPDNVQLMIDTVRG 343
>gi|161523292|ref|YP_001578304.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
gi|160340721|gb|ABX13807.1| uroporphyrinogen decarboxylase [Burkholderia multivorans ATCC
17616]
Length = 392
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 35 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 94
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 95 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 153
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 154 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 213
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ Y+ + R+++ ++R++
Sbjct: 214 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQLKREHD 273
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V + A E + +QGNLDP L
Sbjct: 274 GQRVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILF 332
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 333 APPAVVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 383
>gi|256818948|ref|YP_003140227.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea DSM 7271]
gi|256580531|gb|ACU91666.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea DSM 7271]
Length = 341
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L VL G V PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 3 QNDLFLRVLNGEVTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCQTPELAAEITVQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
DAAILFSDILV+ A+ V + GP + PI T + + PNI+ L Y
Sbjct: 62 DIVGVDAAILFSDILVVPQAMNIEVEMKKGVGPWLPKPIRTAKDVEQAIVPNIEERLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + ++ L N + LIGF G+PWT+ Y + G +D + + + L
Sbjct: 121 --VMEAVKLTKQMLNNRVPLIGFAGSPWTIFCYAVEGSGSRDFSTAKELCFTQPSVAHSL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P
Sbjct: 179 LQKITDTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEAL---APFT 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
K I FAKG Y L +++ A+G+DW+ A EL + + +QGN DP RL+
Sbjct: 236 KVIVFAKGCWYALPEMA-TSNAAALGVDWTCAPEIARELTRGKKVLQGNFDPSRLLAPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V ++D G +I NLGHGI P V +N + V+ V+S ++
Sbjct: 295 EIKQKVKEMIDAFGKDHYIANLGHGILPNVPVENAIAFVEAVKSYRL 341
>gi|90420996|ref|ZP_01228900.1| uroporphyrinogen decarboxylase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334774|gb|EAS48550.1| uroporphyrinogen decarboxylase [Aurantimonas manganoxydans
SI85-9A1]
Length = 339
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 178/343 (51%), Positives = 234/343 (68%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M RK ++ VL+G I PPP+WLMRQAGRYLPEYR R+ FL++CY P++ E+TL
Sbjct: 1 MKTRK--LVRVLEGERIFPPPVWLMRQAGRYLPEYRATRQTAGGFLELCYNPDFATEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDILVI DAL R + FV+ EGP++ PI EI L+P+ +L
Sbjct: 59 QPIRRFGFDAAILFSDILVIPDALDRGLHFVQGEGPKLTPIRPDEIARLDPSRADT--HL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LRK+LP +LIGFCGAPWTVA+YMI+G D R+F Y++ L
Sbjct: 117 APVIATVARLRKELPEETSLIGFCGAPWTVATYMIAGHGTPDQAPARLFGYRHPDEMEQL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+++ A+YLI Q+ AG D +QIFD+ AG L E FE YA + V R++ VR P+A
Sbjct: 177 LYLLAEMGADYLIRQLQAGADCVQIFDSWAGVLDEATFEAYAVKPVARMVEKVRAAVPDA 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I FAKGAG +L YR+ T NA+GLDW+VP+ A LQ EG +QGNLDP+RL+ G +
Sbjct: 237 KIIGFAKGAGSLLNGYRQKTGVNAVGLDWTVPMDQARALQTEGAIQGNLDPLRLIAGGKA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+ IL+ LG GP IFNLGHGITP +V L+K +R
Sbjct: 297 LDEGVDRILEGLGDGPLIFNLGHGITPDAPIAHVEALLKRIRG 339
>gi|256158565|ref|ZP_05456455.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
gi|265997076|ref|ZP_06109633.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
gi|262551544|gb|EEZ07534.1| uroporphyrinogen decarboxylase [Brucella ceti M490/95/1]
Length = 341
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLD +R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDLLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|126463095|ref|YP_001044209.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17029]
gi|166234278|sp|A3PM71|DCUP_RHOS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126104759|gb|ABN77437.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides ATCC 17029]
Length = 343
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 143/341 (41%), Positives = 206/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT E D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMEGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++P I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ--KEGPVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|221214283|ref|ZP_03587255.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD1]
gi|221165938|gb|EED98412.1| uroporphyrinogen decarboxylase [Burkholderia multivorans CGD1]
Length = 392
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 35 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 94
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 95 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 153
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 154 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 213
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ Y+ V R+++ ++R++
Sbjct: 214 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYVRRVVAQLKREHD 273
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V + A E + +QGNLDP L
Sbjct: 274 GQRVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNVGAARERVGGRVALQGNLDPTILF 332
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 333 APPAVVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 383
>gi|99082368|ref|YP_614522.1| uroporphyrinogen decarboxylase [Ruegeria sp. TM1040]
gi|122984122|sp|Q1GDK6|DCUP_SILST RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|99038648|gb|ABF65260.1| uroporphyrinogen decarboxylase [Ruegeria sp. TM1040]
Length = 345
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 148/341 (43%), Positives = 202/341 (59%), Gaps = 1/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ IL L G PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPI
Sbjct: 3 QQKTILRALAGETQAVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT + L PI
Sbjct: 63 RRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITTDADFAKLGPASDVHETLSPI 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL K+LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL
Sbjct: 123 YETVRILSKELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTPLFEALLAR 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + YL AQI AG +V++IFD+ AG L F+ YA +I +A++ ++P+ I
Sbjct: 183 ITEATISYLSAQIEAGAEVVKIFDSWAGSLKGEAFDKYALEPARQITAALKARHPHVPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F + AG + T + + LD SV +A E +Q G VQGNL +V G + ++
Sbjct: 243 GFPREAGEKYIGFHAATGVDCVALDNSVDPEWAAEHVQVAGCVQGNLASRHMVSGGEALV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 303 QDTRRIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVRE 343
>gi|126740631|ref|ZP_01756318.1| uroporphyrinogen decarboxylase [Roseobacter sp. SK209-2-6]
gi|126718432|gb|EBA15147.1| uroporphyrinogen decarboxylase [Roseobacter sp. SK209-2-6]
Length = 344
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 148/344 (43%), Positives = 206/344 (59%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E+K+ IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MAEQKK-ILRALAGEKQSVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL+I ALG ++ FV EGPR+ IT++ + L
Sbjct: 60 QPIRRYGFDAAILFADILLIPQALGADLWFVTGEGPRLSTITSEADFAKLGPASDIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP TLIGF GAPWTVA+YMI+G D G +N F L
Sbjct: 120 NPIYETVKILSRELPAETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKQENRPLFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L +++ + +YL QI AG +V++IFD+ AG L +F YA +I +A++ ++P
Sbjct: 180 LARITEATIDYLSKQIEAGAEVVKIFDSWAGSLKGEDFRKYALEPCRQITAALKERHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A + LQ +G VQGNL +V G +
Sbjct: 240 PVIGFPREAGDAYLGFAKETGIDCLALDNSVDPLWAAQNLQVDGCVQGNLASRHMVTGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ AI+ +GP IFNLGHGITP +P NV ++ TVR
Sbjct: 300 ELVKETRAIVQAFQNGPHIFNLGHGITPDANPDNVKLMIDTVRE 343
>gi|56698468|ref|YP_168843.1| uroporphyrinogen decarboxylase [Ruegeria pomeroyi DSS-3]
gi|81676060|sp|Q5LMB5|DCUP_SILPO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56680205|gb|AAV96871.1| uroporphyrinogen decarboxylase [Ruegeria pomeroyi DSS-3]
Length = 344
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 151/343 (44%), Positives = 205/343 (59%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E K+ +L VL G V++ PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MAETKK-LLRVLAGEVLDTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ F EGPR+ I Q + +D L
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFETGEGPRLSTIGAQADFDRLKPVDAIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP+ LIGF GAPWTVA+YMI+G D G N F+ L
Sbjct: 120 SPIYETVRILTRELPSETALIGFAGAPWTVATYMIAGRGTPDQGPAHALREGNPALFDAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ + EYL AQI AG +V++IFD+ AG L F YA I A++ ++P
Sbjct: 180 IARLTAATIEYLSAQIEAGAEVVKIFDSWAGSLKGEAFTKYALEPCREITQALKARHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGQGYVGFAKATGVDCVALDNSVTPDWAAAHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++D I++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 300 ALVDETRRIVEAFSKGPHIFNLGHGITPDADPENVQLMIDTVR 342
>gi|89056337|ref|YP_511788.1| uroporphyrinogen decarboxylase [Jannaschia sp. CCS1]
gi|122497584|sp|Q28KJ9|DCUP_JANSC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|88865886|gb|ABD56763.1| uroporphyrinogen decarboxylase [Jannaschia sp. CCS1]
Length = 343
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 149/344 (43%), Positives = 208/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++K+ +L L G ++ PP+WLMRQAGRYLPEYR R + +FL +CY PE E+TL
Sbjct: 1 MADKKK-LLRSLAGEAMDVPPVWLMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR++FDA+ILF+DIL+I ALG N+ FV EGPR+ IT D L
Sbjct: 60 QPIRRFDFDASILFADILLIPQALGANLWFVTGEGPRLSTITDASGMARMKTADDIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP TLIGF GAPWTVA+YMI+G D + F+ L
Sbjct: 120 NPIYETVKILAQELPKETTLIGFAGAPWTVATYMIAGRGTPDQAPAHKLREGDPETFDKL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D ++ + EYL Q+ AG +V+++FD+ AG L F+ YA RIIS ++ ++P+
Sbjct: 180 MDLITAATIEYLDMQVQAGAEVVKLFDSWAGSLKGEAFDKYALAPAKRIISELKSRHPDL 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + ++ + +D SV +A E LQ +G VQGNLDP +V G +
Sbjct: 240 PIIAFPREAGEKYIGFANAVGADCLAIDTSVDAIWAAENLQTDGCVQGNLDPKLMVTGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I D L GP IFNLGHGITP DP+NV L+ +RS
Sbjct: 300 ALASEARRIRDALKGGPHIFNLGHGITPDADPENVHILLDAIRS 343
>gi|82701838|ref|YP_411404.1| uroporphyrinogen decarboxylase [Nitrosospira multiformis ATCC
25196]
gi|123754402|sp|Q2YB59|DCUP_NITMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82409903|gb|ABB74012.1| uroporphyrinogen decarboxylase [Nitrosospira multiformis ATCC
25196]
Length = 365
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 184/346 (53%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L L P+WLMRQAGRYL EY Q R + NFL +C P++ E+T+QP+
Sbjct: 5 KNDTLLRALLRQPTEYTPVWLMRQAGRYLSEYNQTRARAGNFLALCKNPDFATEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F E EGPR + +E + + +L +
Sbjct: 65 ARFPLDAAILFSDILTIPDAMGLGLYFAEGEGPRFERPLREEWEIRALTVPDPAVHLRYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S +RK L N + LIGF G+P+T+A YM+ G D Q + Y+ + +LD
Sbjct: 125 MDAVSQIRKTLDNRVPLIGFSGSPFTLACYMVEGAGGTDFRQIKTMLYRRPDLLHHILDI 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--YPNAK 241
+ YL AQI +G + IFDT G L ++ ++ R + ++++ +RR
Sbjct: 185 NAQAVTAYLNAQIESGAQAVMIFDTWGGALSHAAYQQFSLRYMTQVLAGLRRYQGAERIP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L++ + +A+GLDW+V + A + + +QGNLDP L V
Sbjct: 245 SIVFTKGGGLWLESIAD-SGCDAVGLDWTVNIGDARRRVGHKVALQGNLDPAVLFAEPGV 303
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL G G IFNLGHGI+ P+N L LV+ V S
Sbjct: 304 IAAEVEQILASFGEGSGHIFNLGHGISQFTPPENALTLVEAVHSLS 349
>gi|206558444|ref|YP_002229204.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia J2315]
gi|238058005|sp|B4EEZ3|DCUP_BURCJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|198034481|emb|CAR50346.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia J2315]
Length = 364
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 188/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 4 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 64 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 123
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 124 Y---VTGAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 180
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +
Sbjct: 181 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQL 240
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 241 KREHDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLD 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 300 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 355
>gi|167564612|ref|ZP_02357528.1| uroporphyrinogen decarboxylase [Burkholderia oklahomensis EO147]
Length = 364
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RYPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAMPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ + R++S ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L++ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEDIAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPETIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|89886127|ref|NP_001011486.2| uroporphyrinogen decarboxylase [Xenopus (Silurana) tropicalis]
gi|89267848|emb|CAJ82884.1| uroporphyrinogen decarboxylase [Xenopus (Silurana) tropicalis]
Length = 372
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 186/348 (53%), Gaps = 9/348 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+R
Sbjct: 22 NDTFLRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQPLR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI+FSDILVI ALG +R GP +P+ T + + L +
Sbjct: 81 RFPLDAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEELGYV 140
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + LL
Sbjct: 141 FHAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQLLKQ 200
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YP 238
L+DV EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 201 LTDVIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAEGLD 260
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
I FAK A Y L++ + + +GLDW++ A E K +QGN+DP L
Sbjct: 261 QVPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCALYAS 319
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +++ G +I NLGHG+ P +DP +V + V
Sbjct: 320 KEDIEKTVKKMIEGFGQRGYIANLGHGLYPDMDPDHVGAFISAVHKYS 367
>gi|319940674|ref|ZP_08015016.1| uroporphyrinogen decarboxylase [Sutterella wadsworthensis 3_1_45B]
gi|319805825|gb|EFW02592.1| uroporphyrinogen decarboxylase [Sutterella wadsworthensis 3_1_45B]
Length = 355
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 180/351 (51%), Gaps = 7/351 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M L L + P+WLMRQAGRYLPEY R K +F+ + P+Y E+TL
Sbjct: 1 MTLHNDTFLRALMREHTDFTPVWLMRQAGRYLPEYCATRSKAGSFMGLAKNPDYATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPI RY DAAILFSDIL + DA+G + FV+ EGP E + + + L
Sbjct: 61 QPIDRYGIDAAILFSDILTVPDAMGLGLSFVQGEGPVFAHPVQDEAAVKALAVPDIEDKL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +R+ L N + LIGF G+P+T+A YM+ G +D + ++ F +
Sbjct: 121 GYVTAAVRSIRRALDNRVPLIGFSGSPFTLACYMVEGRGSRDFRTAKTMMFRRPDLFERI 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
LD +D A+YL AQI AG +QIFDT G L + +F+ ++ + +++S + R+
Sbjct: 181 LDINADAVADYLNAQIAAGAQAVQIFDTWGGMLADGDFQRFSLAATKKVVSRLTREADGA 240
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVG 297
I F KG G ++ +A+GLDW+ L+ A + +QGN+DP+ L
Sbjct: 241 KVPVIVFTKGGGEWIEEIAA-CGCDAVGLDWTTNLARARRVTEDRVALQGNMDPLALFGD 299
Query: 298 NQVMIDGVNAILDVLGS---GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ++D G G +FNLGHGI +NV LV V
Sbjct: 300 EKTIRSEVRRVIDAFGPVGMGGHVFNLGHGINQFTPIENVQILVDEVHEYS 350
>gi|319778982|ref|YP_004129895.1| Uroporphyrinogen III decarboxylase [Taylorella equigenitalis MCE9]
gi|317109006|gb|ADU91752.1| Uroporphyrinogen III decarboxylase [Taylorella equigenitalis MCE9]
Length = 356
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 130/353 (36%), Positives = 191/353 (54%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L PIWLMRQAGRYLPEYR R+K +FL + +PE+ E+TLQPI
Sbjct: 2 NDTFLRALLRQKCEYTPIWLMRQAGRYLPEYRATREKAGSFLGLAKSPEFACEVTLQPID 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+N DAAILFSDIL++ DA+G + FV EGP+ +PI +E D +N L +
Sbjct: 62 RFNLDAAILFSDILMVPDAMGLGLDFVAGEGPKFANPIRDEEDVKNLKVPD--MNELRYV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++ ++R +L + + LIGF G+PWT+A YMI G K++ Q + Y + +L+
Sbjct: 120 FDAVKLIRGQLQDRVPLIGFAGSPWTIACYMIEGCGSKEYRQIKSMMYSRPELLHSVLEI 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-------RK 236
+ +A+YLI Q+ AG I IFD+ G L ++ ++ + + ++ +R K
Sbjct: 180 CAQSTAQYLIEQVKAGAQAIMIFDSWGGVLAHGYYKEFSLKYMKSVLDTLRGFLNSNEHK 239
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
I+F KG G L++ +A+GLDW+V LS A +Q +QGNLDPM L
Sbjct: 240 GVTVPVIAFTKGGGLWLEDMVD-AGFDALGLDWTVGLSDARRRVQDRVALQGNLDPMALF 298
Query: 296 VGNQVMIDGVNAILDVLGS---GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + ++D G G +FNLGHGI+ +P V LV V +
Sbjct: 299 SDEKSVRAQARNVIDDFGPVASGGHVFNLGHGISQFTNPDIVEALVDEVHNYS 351
>gi|118602987|ref|YP_904202.1| uroporphyrinogen decarboxylase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|171704462|sp|A1AXS4|DCUP_RUTMC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118567926|gb|ABL02731.1| uroporphyrinogen decarboxylase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 347
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 129/343 (37%), Positives = 197/343 (57%), Gaps = 7/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ L PIW+MRQAGRYLPEYR+ R K +FL +C +PE E+T+QPI R++
Sbjct: 5 YINALLKKPTLRTPIWVMRQAGRYLPEYRETRIKAGDFLTLCKSPELACEVTMQPIDRFD 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL I DA+G + F+E EGP+ +P+ T ++ N L + +
Sbjct: 65 LDAAILFSDILTIPDAMGLGLYFLEGEGPKFSNPLNTLSSIEQLKKPNVG-NELSYVTDA 123
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S+++K L N + LIGF G+PWT+A+YM+ GG K+ + + Y+N + LLD LSD
Sbjct: 124 VSVIKKALNNKVPLIGFTGSPWTLATYMVEGGSSKNFVKVKGLMYENPVYMHQLLDKLSD 183
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFIS 244
+ +YL QI GVD + IFDT G L + +E+++ + + +I++ ++RK+
Sbjct: 184 IIIDYLNGQIQVGVDSVMIFDTWGGLLNKQSYEDFSLQYMTKIVNGIKRKFNGKTIPITL 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F KG L+ + + + LDW+V L+ A + + +QGNLDP L + + +
Sbjct: 244 FTKGGAMWLEQIAN-SGCDGVALDWTVELNDAQQRIGAKVALQGNLDPCVLYASPEKIRE 302
Query: 304 GVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL G +FNLGHGI+P V+P+++ LV V
Sbjct: 303 EVKKILSQFQGDTGHVFNLGHGISPDVNPEHMKVLVDVVHEFS 345
>gi|154251710|ref|YP_001412534.1| uroporphyrinogen decarboxylase [Parvibaculum lavamentivorans DS-1]
gi|154155660|gb|ABS62877.1| uroporphyrinogen decarboxylase [Parvibaculum lavamentivorans DS-1]
Length = 355
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 161/341 (47%), Positives = 218/341 (63%), Gaps = 1/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K+L L+G PIWLMRQAGRYLPEYR++R + +FLD+CYTP++ E+TLQPIRR
Sbjct: 14 KKLLRALKGEATEGVPIWLMRQAGRYLPEYRKVRAEAGSFLDLCYTPDFAEEVTLQPIRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDA+ILFSDILV+ DALG+ V F E EGP ++ IT ++ +L P+++
Sbjct: 74 YGFDASILFSDILVVPDALGQKVAFKEGEGPVLEAITNVAGLAALKPVEAVREHLQPVYE 133
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ LR+ LP TLIGF GAPWTVA+Y++ G D G + +AY+ F L+D L+
Sbjct: 134 VVKRLRRSLPPETTLIGFAGAPWTVATYVVGGRGSPDQGAAKAWAYRAPDEFQKLIDLLT 193
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + E+L AQ+ AG +V+Q+FDT AG L E FE +A + + RI ++ ++P+ I+F
Sbjct: 194 DATVEHLSAQVEAGAEVLQVFDTWAGSLPELSFERFALQPMKRIRETLKERFPDIPVIAF 253
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG M Y R T N + LD V +A E LQ G VQGNLDP+ LV G M
Sbjct: 254 PRGAGGMAARYFRETGVNGLSLDTGVSALWAREHLQPLGCVQGNLDPLLLVAGGAEMRRQ 313
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+ LG GPFIFNLGHGI PQ P++V +LV V+ +
Sbjct: 314 ALHILETLGQGPFIFNLGHGIVPQTPPEHVAELVTLVKEWR 354
>gi|110678609|ref|YP_681616.1| uroporphyrinogen decarboxylase [Roseobacter denitrificans OCh 114]
gi|122972962|sp|Q16AR3|DCUP_ROSDO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109454725|gb|ABG30930.1| uroporphyrinogen decarboxylase [Roseobacter denitrificans OCh 114]
Length = 344
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 150/340 (44%), Positives = 204/340 (60%), Gaps = 1/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 5 KTILRSLAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITTQ + +D L PI++
Sbjct: 65 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTQADFDKLKPVDEIDAVLNPIYE 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF GAPWTVA+YMI+G D +N F LL ++
Sbjct: 125 TVRILRRELPQETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALKDENRELFEALLARIT 184
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EYL QI AG +V++IFD+ AG L +F+ YA I +A++ ++P+ I F
Sbjct: 185 QGTIEYLSRQIEAGAEVVKIFDSWAGSLKGADFQRYALEPAREITAAIKARHPDIPVIGF 244
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + + T + + LD SV +A +Q +G VQGNL +V G Q +ID
Sbjct: 245 PREAGDGYIGFAKATGVDCVALDNSVSAEWAAANVQVDGCVQGNLASSHMVTGGQALIDE 304
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
AI+ GP IFNLGHGITP DP NV ++ VR +
Sbjct: 305 TRAIVKAFSGGPHIFNLGHGITPDADPDNVQRMIDAVRGQ 344
>gi|170694324|ref|ZP_02885478.1| uroporphyrinogen decarboxylase [Burkholderia graminis C4D1M]
gi|170140747|gb|EDT08921.1| uroporphyrinogen decarboxylase [Burkholderia graminis C4D1M]
Length = 366
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 126/356 (35%), Positives = 186/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + P+WLMRQAGRYLPEY R + +FL + P + E+TLQ
Sbjct: 4 NLLNDTFLRALLRQPTDYTPVWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLN 118
P+ RY DAAILFSDIL + DA+G + FV EGP P+ T++ P+ID L
Sbjct: 64 PLERYPLDAAILFSDILTVPDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIDATLR 123
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 124 Y---VTDAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYAR 180
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ + A YL AQI AG + IFDT G L + ++ ++ + ++++ +
Sbjct: 181 PDLMHRILEINASSVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQQVVNQL 240
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L T +A+GLDW+V L A E + + +QGN+D
Sbjct: 241 KREHDGEKVPVITFTKGGGLWLDEIAE-TGVDAVGLDWTVNLRNARERVGGKVALQGNID 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + A+LD G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 300 PSVLFAPPAAIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPENVAELVDEVHRHS 355
>gi|294341891|emb|CAZ90320.1| Uroporphyrinogen decarboxylase (URO-D) (UPD) [Thiomonas sp. 3As]
Length = 364
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 186/353 (52%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ + P+WLMRQAGRYLPEY R + +FL + P + E+TLQP+
Sbjct: 7 NDTFLRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAQNPHFATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G +RF EGP+ D P+ ++ D ++ L +
Sbjct: 67 RYALDAAILFSDILTVPDAMGLGLRFEAGEGPKFDRPLRSEADVAALAVPD--MDKLRYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D+ + Y +
Sbjct: 125 FDAVSEIRRALVQNGTQRVPLIGFSGSPWTLACYMVEGGGSDDYRTVKTMLYSRPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--Y 237
+L ++ A+YL AQI AG + IFD+ G L + F+ ++ ++I+A+++K
Sbjct: 185 ILAVNAEAVAQYLAAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYSQQVIAALKQKASL 244
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
+ I F KG G L+ T ++A+GLDW+ L+ A + + +QGNLDP L
Sbjct: 245 ADVPVILFTKGGGQWLEAMAD-TGADALGLDWTTSLAKARALVGQRVALQGNLDPNVLFA 303
Query: 297 GNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHGI+ P++V LV+ V +
Sbjct: 304 PPAAIEKEVQRLLHSFGPVGAGAGHVFNLGHGISQFTPPEHVSALVEAVHTHS 356
>gi|254250968|ref|ZP_04944286.1| Uroporphyrinogen-III decarboxylase [Burkholderia dolosa AUO158]
gi|124893577|gb|EAY67457.1| Uroporphyrinogen-III decarboxylase [Burkholderia dolosa AUO158]
Length = 392
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 129/353 (36%), Positives = 187/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 35 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 94
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYLL 121
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+ID L Y
Sbjct: 95 RFPLDAAILFSDILTIPDAMGLGLDFQAGEGPKFAHPVRTEADVAKLAVPDIDATLGY-- 152
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 153 -VTDAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDL 211
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R+++ V+R+
Sbjct: 212 MHRILDVNALAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIQRVVAQVKRE 271
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L+ + +A+GLDW+V L A E + +QGNLDP
Sbjct: 272 HDGARVPVITFTKGGGQWLEQIAAI-GVDAVGLDWTVNLGAARERVAGRVALQGNLDPTI 330
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 331 LFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 383
>gi|78064769|ref|YP_367538.1| uroporphyrinogen decarboxylase [Burkholderia sp. 383]
gi|77965514|gb|ABB06894.1| Uroporphyrinogen decarboxylase HemE [Burkholderia sp. 383]
Length = 392
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 130/353 (36%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 35 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQPLE 94
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYLL 121
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L Y
Sbjct: 95 RFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEETLGY-- 152
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 153 -VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDL 211
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S ++R+
Sbjct: 212 MHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQLKRE 271
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L+ T +A+GLDW+V L A E + + +QGNLDP
Sbjct: 272 HDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGKARERVAGKVALQGNLDPTI 330
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + A+LD G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 331 LFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 383
>gi|254718109|ref|ZP_05179920.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|265983061|ref|ZP_06095796.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|306839734|ref|ZP_07472536.1| uroporphyrinogen decarboxylase [Brucella sp. NF 2653]
gi|264661653|gb|EEZ31914.1| uroporphyrinogen decarboxylase [Brucella sp. 83/13]
gi|306405194|gb|EFM61471.1| uroporphyrinogen decarboxylase [Brucella sp. NF 2653]
Length = 341
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 183/341 (53%), Positives = 241/341 (70%), Gaps = 2/341 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVQLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ + L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSVVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + YR T + +GLDWSVPLSFA LQ+EG VQGNLDP+R+V G + +G
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAALLQEEGAVQGNLDPLRVVAGGNALDEG 299
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 300 VDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 340
>gi|12804699|gb|AAH01778.1| Uroporphyrinogen decarboxylase [Homo sapiens]
gi|30582313|gb|AAP35383.1| uroporphyrinogen decarboxylase [Homo sapiens]
gi|60655569|gb|AAX32348.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|60655571|gb|AAX32349.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|123979570|gb|ABM81614.1| uroporphyrinogen decarboxylase [synthetic construct]
gi|123994389|gb|ABM84796.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 367
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +Q NLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQVNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|325917270|ref|ZP_08179491.1| uroporphyrinogen decarboxylase [Xanthomonas vesicatoria ATCC 35937]
gi|325536490|gb|EGD08265.1| uroporphyrinogen decarboxylase [Xanthomonas vesicatoria ATCC 35937]
Length = 354
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 186/352 (52%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRLIRRELDGAVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPDVLHHLLS 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLSAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P +V LV+ V+S
Sbjct: 301 AIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPDHVGVLVEAVQSLS 352
>gi|30584783|gb|AAP36644.1| Homo sapiens uroporphyrinogen decarboxylase [synthetic construct]
gi|61372969|gb|AAX43947.1| uroporphyrinogen decarboxylase [synthetic construct]
Length = 368
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 185/349 (53%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +Q NLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQVNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|148225452|ref|NP_001085981.1| MGC82980 protein [Xenopus laevis]
gi|49116745|gb|AAH73643.1| MGC82980 protein [Xenopus laevis]
Length = 367
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 125/351 (35%), Positives = 188/351 (53%), Gaps = 9/351 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L +G N P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 14 SLHNDTFLRAARGEECNHVPVWCMRQAGRYLPEFRETRAG-QDFFASCRSPEICCELTLQ 72
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI+FSDILVI ALG +R GP +P+ T + + L
Sbjct: 73 PLRRFPLDAAIIFSDILVIPQALGMEIRMEPGRGPVFPEPLQTPQDLHKLRSSVDVSEEL 132
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++I++ R K+ + LIGF GAPWT+ +YMI GG + + + YQ+ A + L
Sbjct: 133 GYVFRAITLTRHKIEGKVPLIGFTGAPWTLMTYMIEGGGSNTMSKAKRWLYQHPSASHQL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---- 236
L L+D+ EYL+ Q+ AG +Q+F++HAGCLG +F +++ + I V+ K
Sbjct: 193 LKQLTDIIVEYLVGQVAAGAQALQVFESHAGCLGPQQFSDFSLPYLRDISRRVKHKLKAE 252
Query: 237 -YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL 294
I FAK A Y L++ + + +GLDW++ A E K +QGN+DP L
Sbjct: 253 GLDQVPMIVFAKDAHYALEDLSQ-SGYEVVGLDWTIRPQEARERTGKRVTLQGNMDPCAL 311
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +++ G +I NLGHG+ P +DP++V + V
Sbjct: 312 YASKGDIEKTVKMMIEGFGRRGYIANLGHGLYPDMDPEHVGAFISAVHKYS 362
>gi|186477769|ref|YP_001859239.1| uroporphyrinogen decarboxylase [Burkholderia phymatum STM815]
gi|184194228|gb|ACC72193.1| uroporphyrinogen decarboxylase [Burkholderia phymatum STM815]
Length = 378
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 127/356 (35%), Positives = 185/356 (51%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALMREPTEYTPIWLMRQAGRYLPEYNATRSRAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLN 118
P+ RY DAAILFSDIL + DA+G + F EGP+ P+ T+E P+ID L
Sbjct: 75 PLERYPLDAAILFSDILTVPDAMGLGLDFQVGEGPKFAHPVRTEEDVARLTVPDIDATLR 134
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 135 Y---VTDAVRQIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYGR 191
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ + A YL AQI AG + IFDT G L + ++ ++ + +++ +
Sbjct: 192 PDLMHRILEVNAKAVAAYLNAQIEAGAQAVMIFDTWGGALADGIYQRFSLHYIQQVVRQL 251
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + + +QGN+D
Sbjct: 252 KREHDGNRVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGKARERVGGQVALQGNID 310
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 311 PSVLFAPPSTIRIEARAVLDSFGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 366
>gi|144899671|emb|CAM76535.1| Uroporphyrinogen decarboxylase (URO-D) [Magnetospirillum
gryphiswaldense MSR-1]
Length = 345
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 158/346 (45%), Positives = 208/346 (60%), Gaps = 3/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M K L L G I PPP WLMRQAGRYLPEYR R + +FLD+CY PE VE+TL
Sbjct: 1 MTATK-PFLRALAGETITPPPFWLMRQAGRYLPEYRATRTQAGSFLDLCYNPELAVEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY FDAAILFSDILV+ D LG+ V F E EGP + PI + +I + +
Sbjct: 60 QPLRRYGFDAAILFSDILVVPDGLGQGVAFKEGEGPVLTPIRSARDLD-GLDISGLHDRM 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++ +++ L K +P LIGF GAPWTVA+YMI GG KD Q + + F L
Sbjct: 119 APVYATVAGLSKAIPATTALIGFSGAPWTVATYMIEGGGSKDFSQAKKLMWAEPETFARL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L + + +YLI QI AG + IQIFDT AG L E EF + R++ + + P
Sbjct: 179 MELLIEATGQYLIRQIDAGAEAIQIFDTWAGALPETEFRRWVIEPARRLVERIHSERPGV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F +GAG + + Y T + + LD SVPL +A + Q + VQGNLDP+ LV G
Sbjct: 239 PVIGFPRGAGILYEAYVTETKVDGVSLDSSVPLDWAARVLQPKCTVQGNLDPILLVAGGD 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G++ +L+ LG GPFIFNLGHGI P P+NV L + V++ K
Sbjct: 299 ALDAGIDRVLNTLGKGPFIFNLGHGIIPPTPPENVARLAQRVKAFK 344
>gi|254246702|ref|ZP_04940023.1| Uroporphyrinogen decarboxylase HemE [Burkholderia cenocepacia
PC184]
gi|124871478|gb|EAY63194.1| Uroporphyrinogen decarboxylase HemE [Burkholderia cenocepacia
PC184]
Length = 392
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 188/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 32 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 91
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+ID L
Sbjct: 92 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIDETLG 151
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 152 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 208
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +
Sbjct: 209 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQL 268
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ + +A+GLDW+V L A E + +QGNLD
Sbjct: 269 KREHDGERVPVITFTKGGGLWLEEIAAI-GVDAVGLDWTVNLGVARERVAGRVALQGNLD 327
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 328 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 383
>gi|170699478|ref|ZP_02890521.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria IOP40-10]
gi|170135627|gb|EDT03912.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria IOP40-10]
Length = 375
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 187/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 75 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 134
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 135 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 191
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++ +
Sbjct: 192 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQL 251
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 252 KREHDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLD 310
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 311 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|89889926|ref|ZP_01201437.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium BBFL7]
gi|89518199|gb|EAS20855.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium BBFL7]
Length = 339
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 109/343 (31%), Positives = 187/343 (54%), Gaps = 8/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G ++ PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T+ PI
Sbjct: 3 KNDLFLRALKGETVDRPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCQTPELATEITVMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
++ DAAILFSDILVI A+ +V GP + +PI T E D+ + L
Sbjct: 62 KQIGTDAAILFSDILVIPQAMNIDVEMKNGVGPWLPNPIRTAEDLNRVVVPDVA-DSLSY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I + +++L + + LIGF G+PWT+ Y + G K+ + + F + A + LL
Sbjct: 121 VMEAIDLTKQELNDEVPLIGFAGSPWTILCYCVQGQGSKNFDKAKEFCFTQPEAAHELLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ GV+ +Q+FD+ G L +++ ++ + + +I+ A++ P+ +
Sbjct: 181 RITDTTIAYLKLKVKHGVNAVQVFDSWGGMLSPVDYQEFSWKYIQQIVDALK---PHTEV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I F KG + L + + + + A+G+DW+ A L +QGN DP RL +
Sbjct: 238 IVFGKGCWFALGDMAK-SGAAALGVDWTCSARNARYLSGGNITLQGNFDPSRLFSPPATI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ++D G F+ NLGHGI P + N V V+
Sbjct: 297 KKMVKQMIDEFGKDKFVANLGHGILPNIPVPNAQAFVDAVKEY 339
>gi|84685205|ref|ZP_01013104.1| uroporphyrinogen decarboxylase [Maritimibacter alkaliphilus
HTCC2654]
gi|84666937|gb|EAQ13408.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2654]
Length = 342
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 142/339 (41%), Positives = 207/339 (61%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++ L G + PPIW+MRQAGRYLPEYR R+K +FL +CY PE E+TLQPIRR
Sbjct: 3 KLLMRALAGETLPTPPIWMMRQAGRYLPEYRATREKAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILF+DIL++ ALG ++ FV EGPR+ I +E + D + L P+++
Sbjct: 63 FGFDAAILFADILLVPQALGADLWFVTGEGPRLSTIEGEEDFAKLGGKDDIHDTLGPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ IL ++LP LIGF GAPWTVA+YM++G D G N F L+D ++
Sbjct: 123 TVRILSRELPAETALIGFAGAPWTVATYMVAGRGTSDQGPAHALKDTNRDLFTRLIDKIT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + EYL Q+ AG + ++IFD+ AG L +F+++A RII+ ++ ++P I+F
Sbjct: 183 DATIEYLSKQVEAGAETVKIFDSWAGSLKGRDFDDFALEPTKRIIAELKARHPGLPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + + T ++ + +D SV + A +Q +G VQGNL +V G Q ++D
Sbjct: 243 PREAGERYIGFHKATGADCVAVDNSVSADWVAKHVQPDGCVQGNLASSHMVTGGQALVDE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI L GP IFNLGHGITP DP NV +++ VR+
Sbjct: 303 AQAITRALRGGPHIFNLGHGITPDADPDNVARMIEAVRT 341
>gi|221640137|ref|YP_002526399.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides KD131]
gi|332559142|ref|ZP_08413464.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides WS8N]
gi|254767704|sp|B9KLM3|DCUP_RHOSK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221160918|gb|ACM01898.1| Uroporphyrinogen decarboxylase [Rhodobacter sphaeroides KD131]
gi|332276854|gb|EGJ22169.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides WS8N]
Length = 343
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 142/341 (41%), Positives = 205/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++P I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ--KEGPVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|172059176|ref|YP_001806828.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MC40-6]
gi|171991693|gb|ACB62612.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria MC40-6]
Length = 375
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 187/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 75 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 134
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 135 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 191
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++ +
Sbjct: 192 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQL 251
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 252 KREHDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLD 310
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 311 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 366
>gi|162312106|ref|NP_588085.2| uroporphyrinogen decarboxylase Hem12 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|118572638|sp|Q9USJ5|DCUP_SCHPO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109450946|emb|CAB60679.2| uroporphyrinogen decarboxylase Hem12 (predicted)
[Schizosaccharomyces pombe]
Length = 355
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 132/353 (37%), Positives = 191/353 (54%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP+W+MRQAGRYLPEY ++R K ++F +MC TPE ELTLQP+
Sbjct: 2 KNDLILRAAKGEEVERPPVWIMRQAGRYLPEYHKLRAK-QSFFEMCQTPETACELTLQPV 60
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
R+ DAAI+FSDILVI ALG V +E +GP P+ E L L
Sbjct: 61 TRFKGLLDAAIIFSDILVIPQALGMQVVMLEQKGPHFPKPLVVPEDIDLLEKTPNISAKL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +IS+ R+KL + L+GF GAPWT+ +YMI GG K + + + ++ A + L
Sbjct: 121 GYVMDAISLTREKLDGQVPLMGFSGAPWTIMAYMIEGGGSKTFAKAKSWLFRYPEASHKL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RR 235
L ++D + YLI Q++AG ++QIFD+ AG L +F YA + RI V ++
Sbjct: 181 LKIITDATVSYLIQQVYAGAQLLQIFDSWAGELSPEDFTEYAYPYLVRICQEVKQHLKKK 240
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNLDPMR 293
K I FAKGA Y + + + IGLDW+V A+ ++ QGNLDP
Sbjct: 241 KRDEVPMIVFAKGAWYAIDQLCD-SGYDVIGLDWTVSPKEAVRIRGNRRVTFQGNLDPNI 299
Query: 294 LVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L +++ ++ G G +I NLGHGITP V+P +V ++
Sbjct: 300 LYGTREIIEARTKEMIQDFGGGKQGYIINLGHGITPGVNPDDVRFFLEKCHQY 352
>gi|163754809|ref|ZP_02161931.1| uroporphyrinogen decarboxylase [Kordia algicida OT-1]
gi|161325750|gb|EDP97077.1| uroporphyrinogen decarboxylase [Kordia algicida OT-1]
Length = 340
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 117/344 (34%), Positives = 193/344 (56%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLPE+ +I++K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVERPPVWMMRQAGRYLPEFMEIKRKY-DFFTRCQTPELASEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAILFSDILVI A+ V+ N GP + +P+ TQ+ ++ I L
Sbjct: 62 RRYGMDAAILFSDILVIPQAMNIEVQMKPNFGPYLPNPVRTQKD--VDNVIVADPEALDY 119
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++++I ++ L + I LIGF G+PWT+ Y + G K+ + + F + N A + LL
Sbjct: 120 VYKAIKATKELLNDEIPLIGFAGSPWTILCYCVQGQGSKNFDKAKKFCFTNPVAAHQLLQ 179
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ AGV+ +Q+FD+ G L +++ ++ + + +II A++ +A
Sbjct: 180 KITDTTIAYLKEKVKAGVNAVQVFDSWGGMLSPTDYQEFSWQYINQIIEALK---DDAPV 236
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I++ KG + + R +++ A+G+DW+ A L +QGN DP RL +
Sbjct: 237 IAYGKGCWFAFQEMAR-SNAAALGVDWTCTARNARYLSGGNITLQGNFDPTRLYSPPAEI 295
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G +I NLGHGI P + N + V+ K
Sbjct: 296 KKMVHQMINEFGKDKYIVNLGHGILPDIPLDNAKAFIDAVKEYK 339
>gi|319780609|ref|YP_004140085.1| uroporphyrinogen decarboxylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166497|gb|ADV10035.1| uroporphyrinogen decarboxylase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 343
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 178/340 (52%), Positives = 232/340 (68%), Gaps = 2/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + +L+VL+G PPP+W+MRQAGRYLPEYR+ R++ +FLD+CY P+ VE+TLQPI
Sbjct: 3 QNRIMLDVLKGKAHFPPPLWMMRQAGRYLPEYRETRRRAGSFLDLCYDPDLAVEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ FDA+ILFSDILV+ ALGR+VRF E GP + PIT EI L +F L P+
Sbjct: 63 ERFGFDASILFSDILVVPHALGRDVRFEEGRGPLLTPITAPEILAL--EGKVFHVNLEPV 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ LR KLP+ TLIGFCGAPWTVA+YMI+G D R+FAY+ AF LL
Sbjct: 121 YETVRRLRAKLPDETTLIGFCGAPWTVATYMIAGHGTPDQAPARLFAYREPVAFQRLLKV 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ SA YLI QI AG DV+QIFD+ +G L + F+ + + + I+ VR YP+ I
Sbjct: 181 LAEHSAAYLIRQIEAGADVVQIFDSWSGVLDDETFDLFCVQPMAEIVGRVRAVYPDVPII 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG + YR+ T A+G+DW+VPL A ELQ+ G VQGNLDP+RLV G + + D
Sbjct: 241 GFPKGAGSRYRTYRQKTGVTALGIDWTVPLIAAKELQRSGAVQGNLDPLRLVAGGKALSD 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV AIL LG GP IFNLGHGITP+ +V +VK VRS
Sbjct: 301 GVEAILRALGDGPLIFNLGHGITPETPIAHVEAMVKQVRS 340
>gi|315224330|ref|ZP_07866164.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea F0287]
gi|314945720|gb|EFS97735.1| uroporphyrinogen decarboxylase [Capnocytophaga ochracea F0287]
Length = 341
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 190/347 (54%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L VL G V PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 3 QNNLFLRVLSGEVTERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCKTPELAAEITVQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
DAAILFSDILV+ A+ V + GP + PI T + + PNI+ L Y
Sbjct: 62 DIVGVDAAILFSDILVVPQAMNIEVEMKKGVGPWLPKPIRTAKDVEQVMVPNIEERLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ + ++ L N + LIGF G+PWT+ Y + G +D + + + L
Sbjct: 121 --VMEAVKLTKQMLNNRVPLIGFAGSPWTIFCYAVEGSGSRDFSTAKELCFTEPSVAHTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P
Sbjct: 179 LQKITDTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEAL---APFT 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
K I FAKG Y L +++ A+G+DW+ A EL + + +QGN DP RL+
Sbjct: 236 KVIVFAKGCWYALPEMA-TSNAAALGVDWTCAPEIARELTRGKKVLQGNFDPSRLLAPPA 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V ++D G +I NLGHGI P V +N + V+ V+S ++
Sbjct: 295 EIKQKVKEMIDAFGKDHYIANLGHGILPNVPVENAIAFVEAVKSYRL 341
>gi|302697169|ref|XP_003038263.1| hypothetical protein SCHCODRAFT_72453 [Schizophyllum commune H4-8]
gi|300111960|gb|EFJ03361.1| hypothetical protein SCHCODRAFT_72453 [Schizophyllum commune H4-8]
Length = 359
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 125/354 (35%), Positives = 192/354 (54%), Gaps = 13/354 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L +G P+W+MRQAGRYLPE+R +R F ++C TPE E+T+Q
Sbjct: 6 TLKNDLLLRAARGEKTERAPVWVMRQAGRYLPEFRALRA-HHEFFEICRTPELACEITVQ 64
Query: 62 PIRRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+RRY DAAI+FSDILVI A+G V N GP P+ T P
Sbjct: 65 PVRRYTGLLDAAIIFSDILVIPQAMGMEVIM--NPGPHFPTPLDTPADVEKLPKEVDVEK 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F++++ RK+L + LIGFCGAPWT+ +YM+ GG K + + + ++ +
Sbjct: 123 ELKYVFEALTRTRKELKGEVPLIGFCGAPWTLFAYMVEGGGSKTLQKAKTWLFKYPQESK 182
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++DV +YL+ Q+ AG ++Q+FD+ AG LG +F ++ ++ +I + VR+K
Sbjct: 183 ALLKRIADVCIDYLVGQVKAGAQLLQVFDSWAGELGPDDFAEFSQPTLTQISTGVRQKLT 242
Query: 239 N-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
FAKGA Y L + + +GLDW + + A + + + +QGN+DP
Sbjct: 243 ASGITVPPLTLFAKGANYALGSLAEHAGYDVLGLDWCIDPAEARKIVGGKVALQGNMDPS 302
Query: 293 RLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L G + + V + + G G +I NLGHGITPQVDP+++ + V
Sbjct: 303 LLYGGREAIERAVKRMSEKFGKEGGWIANLGHGITPQVDPEDLKWFFECVHKYS 356
>gi|83719923|ref|YP_443796.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis E264]
gi|167582828|ref|ZP_02375702.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis TXDOH]
gi|167620968|ref|ZP_02389599.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis Bt4]
gi|123536051|sp|Q2STF3|DCUP_BURTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83653748|gb|ABC37811.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis E264]
Length = 364
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ + R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L++ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEDLAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|115350157|ref|YP_771996.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria AMMD]
gi|115280145|gb|ABI85662.1| uroporphyrinogen decarboxylase [Burkholderia ambifaria AMMD]
Length = 392
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 187/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 32 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 91
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 92 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 151
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 152 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 208
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++ +
Sbjct: 209 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVGQL 268
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V L A E + +QGNLD
Sbjct: 269 KREHDGERVPVITFTKGGGLWLEEIAA-TGVDAVGLDWTVNLGAARERVAGRVALQGNLD 327
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V S
Sbjct: 328 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHSHS 383
>gi|170731481|ref|YP_001763428.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia MC0-3]
gi|169814723|gb|ACA89306.1| uroporphyrinogen decarboxylase [Burkholderia cenocepacia MC0-3]
Length = 375
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 188/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+ID L
Sbjct: 75 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIDETLG 134
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 135 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSR 191
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + R++S +
Sbjct: 192 PDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVSQL 251
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ + +A+GLDW+V L A E + +QGNLD
Sbjct: 252 KREHDGERVPVITFTKGGGLWLEEIAAI-GVDAVGLDWTVNLGVARERVAGRVALQGNLD 310
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + A+LD G+ P +FNLGHGI+ P +V +LV V +
Sbjct: 311 PTILFAPPAAVREQARAVLDSYGNHPGHVFNLGHGISQFTSPDHVAELVDEVHTHS 366
>gi|321475414|gb|EFX86377.1| uroporphyrinogen decarboxylase [Daphnia pulex]
Length = 348
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 125/343 (36%), Positives = 182/343 (53%), Gaps = 5/343 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +IL G + P+W+MRQAGRYLPE+R R K +F +C TPE E+TLQ
Sbjct: 7 TLKNDRILRAAVGEETDKVPVWVMRQAGRYLPEFRATRVK-HDFFSLCRTPEIACEVTLQ 65
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
PIRR+ DAAI+FSDILV+ ALG V EGP P+ T E + L
Sbjct: 66 PIRRFPLDAAIIFSDILVVPQALGMEVLMQAGEGPVFTSPLITPEDLRVLETPVNVDEKL 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++I++ R KL + LIGF GAPWT+ SYMI GG K +++ + Y+ + L
Sbjct: 126 GYVFEAINLTRHKLEGRVPLIGFAGAPWTLMSYMIEGGGSKTMAKSKAWLYRYPTESHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DV ++LI Q+ AG ++Q+F++HA LG F +A + +I VR K N
Sbjct: 186 LQILTDVIVDFLIGQVKAGAQMLQVFESHAEYLGPEIFAQFALPYIKQIQERVREKV-NV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F KG + L+ + IGLDW++ ++ VQGN+DP L +
Sbjct: 245 PMCIFPKGGHFSLEQLS-TAGYDIIGLDWTIKPDEGRQKVGSNITVQGNMDPCALYGPKE 303
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ G +I NLGHGI P VDP+++ + +
Sbjct: 304 NIRAIAKDMVSRFGKHRYIANLGHGIYPDVDPEHLAAFIDGIH 346
>gi|259417116|ref|ZP_05741035.1| uroporphyrinogen decarboxylase [Silicibacter sp. TrichCH4B]
gi|259346022|gb|EEW57836.1| uroporphyrinogen decarboxylase [Silicibacter sp. TrichCH4B]
Length = 347
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 146/341 (42%), Positives = 202/341 (59%), Gaps = 1/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+K+ IL L G PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPI
Sbjct: 3 QKKTILRALAGETQAVPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPI 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY FDAAILF+DIL++ ALG + FV EGPR+ ITT+ + L P+
Sbjct: 63 RRYGFDAAILFADILLVPQALGAELWFVTGEGPRLSTITTEADFAKLGPASDVHETLNPV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL + LP+ TLIGF GAPWTVA+YMI+G D G +N+ F LL
Sbjct: 123 YETVRILSRALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALMQENTALFEALLAR 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + YL AQI AG +V++IFD+ AG L FE YA I +A++ ++P I
Sbjct: 183 ITEATISYLSAQIEAGAEVVKIFDSWAGSLKGDAFEKYALEPAREITAALKARHPGVPII 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F + AG + + T + + LD SV +A ++Q +G VQGNL +V G + ++
Sbjct: 243 GFPREAGEKYVGFHKATGVDCVALDNSVEPDWAAVQVQVDGCVQGNLASRHMVTGGEELV 302
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ GP IFNLGHGITP +P NV ++ TVR+
Sbjct: 303 ADTRRIVQAFSKGPHIFNLGHGITPDANPDNVQLMIDTVRA 343
>gi|323527837|ref|YP_004229990.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1001]
gi|323384839|gb|ADX56930.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1001]
Length = 366
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 125/356 (35%), Positives = 186/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + P+WLMRQAGRYLPEY R + +FL + P + E+TLQ
Sbjct: 4 NLLNDTFLRALLRQPTDYTPVWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLN 118
P+ RY DAAILFSDIL + DA+G + FV EGP P+ T++ P+I+ L
Sbjct: 64 PLERYPLDAAILFSDILTVPDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIEATLG 123
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 124 Y---VTDAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYAR 180
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ + A YL AQI AG + IFDT G L + ++ ++ + ++++ +
Sbjct: 181 PDLMHRILEVNASSVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQQVVNQL 240
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L T +A+GLDW+V L A E + + +QGN+D
Sbjct: 241 KREHDGEKVPVITFTKGGGLWLDEIAE-TGVDAVGLDWTVNLRKARERVGGKVTLQGNID 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + A+LD G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 300 PAVLFAPPASIRMEARAVLDAFGNHPGHVFNLGHGISQFTPPENVAELVDEVHRHS 355
>gi|312131419|ref|YP_003998759.1| uroporphyrinogen decarboxylase [Leadbetterella byssophila DSM
17132]
gi|311907965|gb|ADQ18406.1| uroporphyrinogen decarboxylase [Leadbetterella byssophila DSM
17132]
Length = 339
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 112/344 (32%), Positives = 186/344 (54%), Gaps = 7/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G P+W+MRQAGR L EYR++R K +F+ + TPE E+TL
Sbjct: 1 MELQNDLLLRAARGEKTERVPVWMMRQAGRILKEYREVRAKAGSFIALATTPELAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+ DAAI+FSDILV+ +A+G VE +GP + T+E L ++ +
Sbjct: 61 QPVDILGVDAAIIFSDILVVPEAMGLPYEMVEAKGPYFPKTVKTKEDIDLLVTTEME-DR 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +++S+ I++++L + LIGF GAP+T+ YMI G K + + Y + +
Sbjct: 120 LSYVYESMDIVKRELGGRVPLIGFAGAPFTIFCYMIEGQGSKTFSKAKKVLYSDPEFAHT 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ +++ + YL ++ G D++QIFD+ AG L ++ ++ + RI A +P
Sbjct: 180 LLNKITEATISYLKGKVKHGADLLQIFDSWAGVLSPAQYSAFSIPYLKRISDA----FPE 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
F+KGA + K+ L+ + +GLDW++ + + EL +QGNLDP L
Sbjct: 236 VPVTLFSKGAFFARKDLGELS-CDVVGLDWNMDIRESRELIPNKTLQGNLDPCVLYSPFS 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G +I NLGHG+ P DP+ V ++TV++
Sbjct: 295 EVEKQTKTMVQAFGKERYIANLGHGVYPDTDPEKVKCFIETVKA 338
>gi|238022103|ref|ZP_04602529.1| hypothetical protein GCWU000324_02009 [Kingella oralis ATCC 51147]
gi|237866717|gb|EEP67759.1| hypothetical protein GCWU000324_02009 [Kingella oralis ATCC 51147]
Length = 353
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 185/349 (53%), Gaps = 8/349 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + + L PIWLMRQAGRYLPEY+ R +F+ +C + E+TLQ
Sbjct: 3 HLQNDTFIRALLRQPTEYTPIWLMRQAGRYLPEYKTTRAFAGDFMSLCRNKDLATEVTLQ 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
PI R+N DAAILFSDIL I DA+G +RF EGP+ + P+ ++ L D +N L
Sbjct: 63 PIDRFNLDAAILFSDILTIPDAMGLGLRFETGEGPKFERPLQHEQDIELLAVPD--MNKL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++++ +RK L + LIGF G+P+T+A YMI G +D + Y + +
Sbjct: 121 NYVFEAVAGIRKALDGRVPLIGFSGSPFTLACYMIEGSGSRDWRTVKTMLYTRPDLLHRV 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
LD + +YL QI G +QIFDT G L F+ ++ + +II +++R +
Sbjct: 181 LDINTQAITQYLNHQIEHGAQAVQIFDTWGGTLSHEAFQTFSLHYIKQIIGSLKRNHNGA 240
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
I F KG G L+ + ++AIGLDW+ ++ A + + +QGNLDP+ L
Sbjct: 241 TIPVIVFTKGGGQWLEQLAN-SGADAIGLDWTTDIAQARAHVNDQVALQGNLDPLALFGT 299
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL G G +FNLGHGI P++V LV+TV
Sbjct: 300 PKTICTEAAHILAGYGHGHGHVFNLGHGINQHTPPEHVEILVETVHELS 348
>gi|304415428|ref|ZP_07396079.1| uroporphyrinogen decarboxylase [Candidatus Regiella insecticola
LSR1]
gi|304282727|gb|EFL91239.1| uroporphyrinogen decarboxylase [Candidatus Regiella insecticola
LSR1]
Length = 383
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 130/354 (36%), Positives = 193/354 (54%), Gaps = 11/354 (3%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + + L L ++ P+W+MRQAGRYLPEY+ IRK+ NF+ +C PE E+T
Sbjct: 12 MNKLKNDRYLRALLRQPVDATPVWMMRQAGRYLPEYQDIRKQAGNFMSLCKNPELACEVT 71
Query: 60 LQPIRRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
+QP+RRY DAAI+FSDIL I DA+G + FVE EGPR D PIT + P+ D
Sbjct: 72 MQPLRRYPLLDAAIVFSDILTIPDAMGLGLYFVEGEGPRFDKPITCRADVEKLPDPDPE- 130
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSR 175
L + ++ +R +L LIGF G+PWT+A+YM+ GG K + + + +
Sbjct: 131 QELGYVIDAVRKVRHELAGSRPLIGFSGSPWTLAAYMVEGGSSKNNNFTKIKKMMCDDPE 190
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ LL+ L+ +YL AQI AG + IFDT G L ++ +++ + +I+ +
Sbjct: 191 SLKLLLEKLTKTVTQYLNAQIKAGAQSVMIFDTWGGLLTTKGYQTFSSHYMKKILKVLIG 250
Query: 236 KYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
+ F KG G+ L+ T +AIGLDW+ ++ A + + +QGN+DP
Sbjct: 251 ENEGRPVPVTLFTKGGGHWLEEIAS-TGCDAIGLDWTTDIASARRQVGDKVALQGNMDPH 309
Query: 293 RLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V++IL G G +FNLGHGI P+NV V TV S
Sbjct: 310 ILCAQPERIRQEVSSILAGYGEGSGHVFNLGHGILQDTPPENVDVFVNTVHSFS 363
>gi|255261783|ref|ZP_05341125.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
gi|255104118|gb|EET46792.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
Length = 343
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 146/341 (42%), Positives = 208/341 (60%), Gaps = 1/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL+I ALG ++ FV EGPR+ +T+ + +L P+++
Sbjct: 63 YGFDAAILFADILLIPQALGADLWFVTGEGPRLSTVTSADDLKKLKPATDIHYHLSPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ IL ++LP+ TLIGF GAPWTVA+YMI+G D G +N F LLD ++
Sbjct: 123 TVRILSRELPSETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKNENREVFVALLDLIT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + Y+ AQI AG +V++IFD+ AG L +F+++A +II+A++ K+P I+F
Sbjct: 183 DATINYMSAQIEAGAEVVKIFDSWAGSLSAQDFQDFAIAPAIKIIAALKAKHPGVPIIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG T ++ + LD V +A + +Q +G +QGNL +V G ++
Sbjct: 243 PRGAGEAYVGLHAATGADCVALDDGVTAEWAAKHVQVDGCIQGNLKSSHMVTGGDALVSE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D GP IFNLGHGITP DP+NV ++ TVR +
Sbjct: 303 TRRIVDAFKGGPHIFNLGHGITPDADPENVQLMIDTVREAR 343
>gi|167838418|ref|ZP_02465277.1| uroporphyrinogen decarboxylase [Burkholderia thailandensis MSMB43]
Length = 364
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGPR P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPRFAHPVRTEADVAKLAVPDVGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYSRPDLMQ 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ + R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L++ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEDLAA-TGVDAVGLDWTVSLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|213962221|ref|ZP_03390485.1| uroporphyrinogen decarboxylase [Capnocytophaga sputigena Capno]
gi|213955227|gb|EEB66545.1| uroporphyrinogen decarboxylase [Capnocytophaga sputigena Capno]
Length = 340
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 114/343 (33%), Positives = 180/343 (52%), Gaps = 8/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L VL G PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QP+
Sbjct: 3 QNDLFLRVLNGETTQRPPVWMMRQAGRYLPEFRALRDKY-DFFTRCQTPELAAEITIQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDILV+ A+ + GP + +PI T + I L
Sbjct: 62 DIVGVDAAILFSDILVVPQAMNIPFEMKKGVGPWLPNPIRTAKDVA-QVTIPNIQERLGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ + ++ L N + LIGF G+PWT+ Y + G +D+ + F + + LL
Sbjct: 121 VIEAVKLTKQMLNNRVPLIGFAGSPWTILCYAVEGAGSRDYATAKEFCFTQPELAHQLLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ AGVD +Q+FD+ G L ++ ++ + + +I+ A+ P K
Sbjct: 181 KITDTTILYLKEKVKAGVDAVQLFDSWGGVLAPDDYRTFSWQYLNQIVEAL---APLTKV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I FAKG Y L + + A+G+DW+ A +L +QGN DP +L+ +
Sbjct: 238 IVFAKGCWYALPEMA-TSKAAALGVDWTCAPKTARQLTGGNKVLQGNFDPSQLLAPPAQI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ++D G +I NLGHGI P V +N + V+ V+
Sbjct: 297 KKKVKEMIDAFGKDHYIANLGHGILPNVPIENAIAFVEAVKEY 339
>gi|325954069|ref|YP_004237729.1| uroporphyrinogen decarboxylase [Weeksella virosa DSM 16922]
gi|323436687|gb|ADX67151.1| Uroporphyrinogen decarboxylase [Weeksella virosa DSM 16922]
Length = 341
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 204/346 (58%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G ++ PP+W+MRQAGRYLPE+ ++R ++ +F C TPE E+TLQPI
Sbjct: 3 KNDLFLKALRGEEVDRPPVWMMRQAGRYLPEFIKLRDQY-DFFTRCRTPELAAEITLQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
RR+ DAAI+FSDILV+ A+G + GP + +PI T + L++P+I+ L Y
Sbjct: 62 RRFPLDAAIIFSDILVLPQAMGMDFEMKNGIGPWLENPIKTLQDVENLIDPDIEETLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ I +K+L N I LIGF G+PWT+ Y + G K + + F YQN +A + L
Sbjct: 121 --VMDALDITKKELDNKIPLIGFAGSPWTILCYAVEGRGSKAFDKAKSFCYQNPKAAHLL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++ V+ +YL ++ GV+ +QIFD+ G L +++ ++ + +I +A+ P+A
Sbjct: 179 LEKITKVTIDYLKKKVEHGVNAVQIFDSWGGMLSPQDYDEFSWPYIEQITNAL---APHA 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L R + ++A+G+DW+V A EL +QGN DP RL+ +
Sbjct: 236 PVIVFGKGCWFALDKMSR-SKASALGVDWTVTPQTARELTGNRITLQGNFDPSRLMSPPK 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ V ++D G+ ++ NLGHGI P + +N ++ V + K
Sbjct: 295 VIQQMVKEMIDGFGTTKYVANLGHGILPTIPVENAQAFIEAVVNYK 340
>gi|325983379|ref|YP_004295781.1| uroporphyrinogen decarboxylase [Nitrosomonas sp. AL212]
gi|325532898|gb|ADZ27619.1| uroporphyrinogen decarboxylase [Nitrosomonas sp. AL212]
Length = 357
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + +L L ++ P+WLMRQAGRYL EY R + +FL +C P + E+T
Sbjct: 1 MTTLKNDTLLRALLKQPVDYTPVWLMRQAGRYLAEYNATRARAGDFLALCKNPGFATEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+QP+ R++ DAAILFSDIL I DA+G + F EGP + +E + +
Sbjct: 61 MQPLARFSLDAAILFSDILTIPDAMGLGLYFAHGEGPMFERPLREEKEIRALKVPDPGKE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +RK L N + LIGF G+P+T+A YM+ G + + + YQ +
Sbjct: 121 LRYVMDAVSEIRKALDNRVPLIGFSGSPFTLACYMVEGRGGTEFREIKTMLYQRPELLHH 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD + YL AQI +G ++ IFDT G L ++ ++ R + +I++ ++R +
Sbjct: 181 ILDVNAKAVTAYLNAQIESGAQIVMIFDTWGGALSHGAYQEFSLRYMQQIVAGLKRDHEG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F KG G L+ + +A+GLDW++ + A + + +QGNLDP L
Sbjct: 241 MRIPKIVFTKGGGLWLELIADI-GCDAVGLDWTIDIGEARRRVGDKVALQGNLDPSVLFA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ V IL G+G +FNLGHGI+ P+N L++ V +
Sbjct: 300 SPEVIAAEVEKILLSYGAGSGHVFNLGHGISQFTPPENAAALIEAVHTLS 349
>gi|126451836|ref|YP_001068255.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106a]
gi|167740786|ref|ZP_02413560.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 14]
gi|167826364|ref|ZP_02457835.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 9]
gi|167847882|ref|ZP_02473390.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei B7210]
gi|226193192|ref|ZP_03788802.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pakistan
9]
gi|242317202|ref|ZP_04816218.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106b]
gi|254194682|ref|ZP_04901113.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei S13]
gi|166234236|sp|A3P0Y4|DCUP_BURP0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126225478|gb|ABN89018.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106a]
gi|169651432|gb|EDS84125.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei S13]
gi|225934792|gb|EEH30769.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pakistan
9]
gi|242140441|gb|EES26843.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1106b]
Length = 364
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDINAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|293603083|ref|ZP_06685517.1| uroporphyrinogen decarboxylase [Achromobacter piechaudii ATCC
43553]
gi|292818477|gb|EFF77524.1| uroporphyrinogen decarboxylase [Achromobacter piechaudii ATCC
43553]
Length = 357
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 185/351 (52%), Gaps = 10/351 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + L L + PIWLMRQAGRYLPEYR R + +F+ + P+Y +E+TLQ
Sbjct: 5 SLKNDVFLRSLLREPVPYTPIWLMRQAGRYLPEYRATRARAGSFMGLAQNPDYAMEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ R++ DAAILFSDIL + A+G + F E EGPR P+ ++ D ++ L
Sbjct: 65 PLARFDLDAAILFSDILTVPHAMGLGLDFAEGEGPRFAHPVRDEQDVARLAVPD--MDKL 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F ++S++R++L + LIGF G+P+T+A YM+ G D+ + Y + +
Sbjct: 123 RYVFDAVSVIRRELDGKVPLIGFAGSPFTIACYMVEGKGSDDYRLIKTMLYSRPDLLHRI 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L+ ++ + +YL AQI AG + +FD+ G L + F+ ++ +++ + R+
Sbjct: 183 LEINAEATLQYLNAQIAAGAQAVMLFDSWGGVLADGLFQQFSLAYTKKVVDGLTRENEGR 242
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVG 297
I F KG G L+ +A+GLDW+V L+ A + QGNLDPM L G
Sbjct: 243 RVPVIVFTKGGGQWLEQIAA-CGCDAVGLDWTVDLAAARRRTGDSVAFQGNLDPMALFGG 301
Query: 298 NQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G G +FNLGHGI+ P V +LV+ V
Sbjct: 302 GPAVRAEARRVLDAFGPVGKGGHVFNLGHGISRFTPPDAVAELVEEVHQHS 352
>gi|146338935|ref|YP_001203983.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. ORS278]
gi|172046979|sp|A4YPC0|DCUP_BRASO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146191741|emb|CAL75746.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. ORS278]
Length = 343
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 155/342 (45%), Positives = 213/342 (62%), Gaps = 2/342 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++VL G + PPIW+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIR
Sbjct: 2 NKPFIDVLAGQRQSVPPIWMMRQAGRYLPEYREVRAKAGGFLDLCFNPELAAEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T E + + + L+ L +F
Sbjct: 62 RFGFDAAIIFSDILVIPHALGRSVRFEVGEGPRLDPLDTPE-KISTLSGEADLSKLEAVF 120
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R +LP LIGFCGAPWTVA+YM++G D R+ AY+ AF ++D L
Sbjct: 121 EALRRVRSELPQSTALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYRAPEAFQRIIDAL 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D S YL+ Q+ AG D +QIFDT AG L EF ++ RI+ VR+ P+AK I
Sbjct: 181 VDSSIAYLLKQLDAGADALQIFDTWAGVLSPREFARWSVAPTRRIVEGVRKIRPDAKIIG 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L Y T +A+ +DW+ E +Q + VQGNLDP+ L+ G +
Sbjct: 241 FPRGAGALLPGYVTETGVDAVSIDWTAEPGLVRERVQSKVAVQGNLDPLALITGGAALDQ 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGITP+ +V ++ VR+ K
Sbjct: 301 AVDDVLASYAGGRHIFNLGHGITPETPIAHVEQMLARVRAYK 342
>gi|194207524|ref|XP_001496410.2| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 1 [Equus caballus]
Length = 367
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 HRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREECDLERLKHPATVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHRLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFSKFALPYIRDVAKQVKAQLQEAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAK-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DPK+V V V
Sbjct: 313 SEEEIGRLVKQMLDDFGPQRYIANLGHGLYPDMDPKHVGAFVDAVHKHS 361
>gi|47216605|emb|CAG10903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 368
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 130/347 (37%), Positives = 194/347 (55%), Gaps = 8/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G P+W MRQAGRYLPE+R+ R+ ++F D C +PE ELTLQP+R
Sbjct: 17 NDTFLRAARGEDTPHVPVWCMRQAGRYLPEFRKAREG-RDFFDTCRSPEACCELTLQPLR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ FDAAI+FSDILV+ ALG +V+ V +GP +P+ E L +
Sbjct: 76 RFPFDAAIIFSDILVVPQALGMSVQMVAGKGPTFPEPLKEPEDLQQLQAKVDVSKELDYV 135
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I++ R KL + LIGF GAPWT+ SYMI GG H + + + Y++ A + LL
Sbjct: 136 FKAITLTRHKLEGKVPLIGFSGAPWTLMSYMIEGGGSSTHAKAKRWLYRHPEASHMLLRM 195
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP----N 239
L+DV +YL+ Q+ AG +Q+F++HAG LG EF+ ++ + I V+ K +
Sbjct: 196 LTDVIVQYLLGQVAAGAQALQVFESHAGILGPAEFKEFSLAYLRDIARRVKEKLKEAGQD 255
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
+ FAK A Y L++ + + +GLDW+V A E + +QGN+DP L
Sbjct: 256 VPMVVFAKDAHYALEDLSQ-SHYEVVGLDWTVDPRSARERTGGKVSLQGNMDPCALYAPK 314
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G+ +I NLGHG+ P +DP+NV V+ V
Sbjct: 315 EHISRIVKKMLEGFGTKGYIANLGHGLYPDMDPENVGAFVEAVHRHS 361
>gi|326428753|gb|EGD74323.1| uroporphyrinogen decarboxylase [Salpingoeca sp. ATCC 50818]
Length = 737
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 125/347 (36%), Positives = 194/347 (55%), Gaps = 8/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL + + P+W+MRQAGRYLPEY I + +F D C TP +TLQP+
Sbjct: 28 KNDLILRAARREDVERVPVWVMRQAGRYLPEYNAIGEGL-DFFDKCRTPALACAITLQPL 86
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
R+ DAAI+FSDILVI ALG + V+ +GP PIT +E I LN ++D+ L
Sbjct: 87 VRFPIDAAIIFSDILVILQALGMHCDMVKGKGPTFPQPITCREDIDALNADVDVH-ESLG 145
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++I++ R +L H+ LIGF GAPWT+ +Y I G K + + + Y++ A + LL
Sbjct: 146 YVFKAITLTRHRLGGHVPLIGFAGAPWTLFAYAIEGSGSKTFSKAKSWLYKDPEASHRLL 205
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PN 239
++DV+ YL+AQ+ AG ++Q+FD+ AG L F +AA + RI SAV+ +
Sbjct: 206 SMITDVTVRYLVAQVRAGAQLLQVFDSWAGSLSPRHFREFAAPYLVRIASAVKAELGTDA 265
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGN 298
I FAKGA + + +D + + LDW++ A K QGN+DP + +
Sbjct: 266 VPMICFAKGA-HWAFSLLESSDYDVLSLDWTMDPQEAQRATKSRMAFQGNMDPCAMYGSD 324
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ++ + G+ I N+GHG++P ++P+ V V V +
Sbjct: 325 DTIREEVCRVMSLFGTRGHIANMGHGMSPDMEPRAVAAFVDAVHNFS 371
>gi|163733940|ref|ZP_02141382.1| uroporphyrinogen decarboxylase [Roseobacter litoralis Och 149]
gi|161393051|gb|EDQ17378.1| uroporphyrinogen decarboxylase [Roseobacter litoralis Och 149]
Length = 344
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 149/340 (43%), Positives = 203/340 (59%), Gaps = 1/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 5 KTILRSLAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 64
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITTQ + + L PI++
Sbjct: 65 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTQADFDKLKPVGEIDAVLNPIYE 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF GAPWTVA+YMI+G D +N F LL ++
Sbjct: 125 TVRILRQELPQETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALKDENRELFEALLARIT 184
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EYL QI AG +V++IFD+ AG L +F+ YA I +A++ ++P+ I F
Sbjct: 185 QGTIEYLSKQIEAGAEVVKIFDSWAGSLKGADFQKYALEPAREITAAIKARHPDTPVIGF 244
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + + T + + LD SV +A +Q +G VQGNL +V G Q +ID
Sbjct: 245 PREAGDGYIGFAKATGVDCVALDNSVSADWAAANVQVDGCVQGNLASSHMVTGGQALIDE 304
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
AI+ GP IFNLGHGITP DP NV ++ VR +
Sbjct: 305 TRAIVKAFSGGPHIFNLGHGITPDADPDNVQRMIDAVRGQ 344
>gi|115633818|ref|XP_784308.2| PREDICTED: similar to MGC83088 protein [Strongylocentrotus
purpuratus]
gi|115951010|ref|XP_001192736.1| PREDICTED: similar to MGC83088 protein [Strongylocentrotus
purpuratus]
Length = 368
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 190/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G P+WLMRQAGRYLPE+R++R + NF +C TP E+TLQPI
Sbjct: 13 KNDLILRAARGEKTERVPVWLMRQAGRYLPEFREMRAE-HNFFKVCQTPALACEVTLQPI 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY-LLNPNIDLFLNYLL 121
RR++ DAAI+F DILVI ALG V + GP +P+T+ + LN +D+ L
Sbjct: 72 RRFDLDAAIIFCDILVIPQALGLTVEMIPGTGPSFPEPLTSPDDLSRLNAEVDIN-QALS 130
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F+++++ RK+L + LIGF GAPWT+ Y I GG K + + + Y A + LL
Sbjct: 131 YVFEALTLTRKELDGKVPLIGFSGAPWTLMVYCIEGGGSKTFSKAKKWLYTQPDASHKLL 190
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK----- 236
L+ +YL+ Q+ AG ++Q+FD+HAG LG +F + + +I V+ K
Sbjct: 191 KILTRTIVDYLVGQVLAGAQLLQVFDSHAGALGYDKFCQFCLPYLQQIAKEVKEKLRAKS 250
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I FAKGA Y + + D + + LDW V A + P+QGNLDP +
Sbjct: 251 VEPVPMIVFAKGANYAISELSQ-CDYDVMSLDWDVQPQIARAQAGPNFPLQGNLDPCAIY 309
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G+ +I NLGHGI P DP++V + +V
Sbjct: 310 SSKEDISSYVAQMLERFGTQSYIANLGHGIYPDFDPEHVRAFIDSVHQHS 359
>gi|325525069|gb|EGD02968.1| uroporphyrinogen decarboxylase [Burkholderia sp. TJI49]
Length = 364
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 129/356 (36%), Positives = 189/356 (53%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 4 NLLNDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
P+ R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ P+I+ L
Sbjct: 64 PLERFPLDAAILFSDILTIPDAMGLGLDFQVGEGPKFAHPVRTEADVAKLAVPDIEATLG 123
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 124 Y---VTGAVREIRRALTDGQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYAR 180
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ + A YL AQI AG + IFDT G L + ++ Y+ + R+++ +
Sbjct: 181 PDLMHRILEVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRYSLDYIRRVVAQL 240
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+R++ I+F KG G L+ T +A+GLDW+V + A E + +QGNLD
Sbjct: 241 KREHDGERVPVITFTKGGGLWLEEIAS-TGVDAVGLDWTVNVGAARERVAGRVALQGNLD 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L V+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 300 PTILFAPPAVVREQARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|134281436|ref|ZP_01768144.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 305]
gi|134247103|gb|EBA47189.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 305]
Length = 364
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 185/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L++ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEDLAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|53720998|ref|YP_109984.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei K96243]
gi|126439558|ref|YP_001060956.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 668]
gi|167896441|ref|ZP_02483843.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 7894]
gi|167904843|ref|ZP_02492048.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei NCTC
13177]
gi|167913120|ref|ZP_02500211.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 112]
gi|237814339|ref|YP_002898790.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei MSHR346]
gi|254184017|ref|ZP_04890608.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1655]
gi|254259304|ref|ZP_04950358.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710a]
gi|254298709|ref|ZP_04966160.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 406e]
gi|81690183|sp|Q63PI5|DCUP_BURPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234237|sp|A3NF35|DCUP_BURP6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|52211412|emb|CAH37403.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei K96243]
gi|126219051|gb|ABN82557.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 668]
gi|157808574|gb|EDO85744.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 406e]
gi|184214549|gb|EDU11592.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1655]
gi|237504682|gb|ACQ97000.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei MSHR346]
gi|254217993|gb|EET07377.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710a]
Length = 364
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|158749613|ref|NP_062082.1| uroporphyrinogen decarboxylase [Rattus norvegicus]
gi|149035558|gb|EDL90239.1| uroporphyrinogen decarboxylase, isoform CRA_a [Rattus norvegicus]
gi|165970690|gb|AAI58691.1| Uroporphyrinogen decarboxylase [Rattus norvegicus]
Length = 367
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 181/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ A + LL
Sbjct: 134 VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQKPLASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP---- 238
L+D YLI Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|260431648|ref|ZP_05785619.1| uroporphyrinogen decarboxylase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415476|gb|EEX08735.1| uroporphyrinogen decarboxylase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 344
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 152/344 (44%), Positives = 210/344 (61%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +K+L L G V++ PPIW+MRQAGRYLPEYR R++ +FL +CYTP+ E+TL
Sbjct: 1 MAE-NKKLLRALAGEVLDTPPIWMMRQAGRYLPEYRATREQAGDFLSLCYTPDLAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q + +D L
Sbjct: 60 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITQQSDFDALKPVDAIHETL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++ IL ++LP+ TLIGF GAPWTVA+YMI+G D +N+ F L
Sbjct: 120 SPVYETVRILSRELPSETTLIGFAGAPWTVATYMIAGRGTPDQAPAHALREENTALFEAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++ + EYL AQI +G +V++IFD+ AG L F YA I A++ ++P
Sbjct: 180 LDRITAATIEYLSAQIESGAEVVKIFDSWAGSLKGEAFTKYAVEPCRIITRALKDRHPGI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + + T + + LD SV +A E +Q +G VQGNL +V G Q
Sbjct: 240 PVIGFPREAGEGYVGFAKATGVDCVALDNSVAPEWAAEHVQVDGCVQGNLASSHMVTGGQ 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++D + I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 300 ALVDETHRIVRAFSKGPHIFNLGHGITPDADPGNVQLMIDTVRG 343
>gi|254459889|ref|ZP_05073305.1| uroporphyrinogen decarboxylase [Rhodobacterales bacterium HTCC2083]
gi|206676478|gb|EDZ40965.1| uroporphyrinogen decarboxylase [Rhodobacteraceae bacterium
HTCC2083]
Length = 343
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 148/344 (43%), Positives = 208/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MTSQK-TILRALSGETLPTPPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELATEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+ILF+DIL++ ALG ++RF EGPR+ ITT+ D ++L
Sbjct: 60 QPIRRYGFDASILFADILLVPQALGADLRFETGEGPRLSTITTRAELDALKPADDIHDHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++++++ L K LP+ TLIGF GAPWTVA+YMI G D +N F +
Sbjct: 120 SPVYETVNRLSKALPDETTLIGFAGAPWTVATYMIGGKGTPDQAPAHALKAENLPVFEGV 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD +++ + YL QI AG +VI+IFD+ AG L +F+ Y+ + +I+ V+ +PN
Sbjct: 180 LDRITEATIAYLNKQIEAGAEVIKIFDSWAGSLKGDDFDKYSLAPMRKIVDGVKAAHPNT 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I+F +GAG K ++ I D +V + A +Q +G VQGNL +V G +
Sbjct: 240 PIIAFPRGAGERYKGAHAAIGADCIAFDDAVSAEWVAQNVQPDGCVQGNLASSHMVTGGE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I+DVL +GP IFNLGHGITP DP+NV ++ TVR+
Sbjct: 300 TLVSETRRIVDVLSNGPHIFNLGHGITPDADPENVQLMIDTVRA 343
>gi|124009641|ref|ZP_01694314.1| uroporphyrinogen decarboxylase [Microscilla marina ATCC 23134]
gi|123984782|gb|EAY24762.1| uroporphyrinogen decarboxylase [Microscilla marina ATCC 23134]
Length = 346
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 122/344 (35%), Positives = 186/344 (54%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL L+G V P+WLMRQAGR LPEYR IR K F+++ TPE E+T+QP+
Sbjct: 5 KNDLILRTLRGEVTERKPVWLMRQAGRILPEYRAIRSKLSGFIELVTTPELAAEVTIQPV 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI +A+G +E +GP E + + L +
Sbjct: 65 DILGVDAAIIFSDILVIPEAMGLPYEMIEKKGPFFPKTIQSEADAKKIKVADPESDLGYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I I +K L + LIGF GAPWT+ +YM+ G K + + Y+ + +L
Sbjct: 125 LEAIRITKKNLDGRVPLIGFAGAPWTIFAYMVEGSGSKTFSKAKAMLYRTPELAHSILQK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL AQI AGV+++Q+FD+ AG L ++ +A + +I A+ I
Sbjct: 185 ITDSTILYLKAQIKAGVNLVQLFDSWAGLLSPETYQAFAMPYLKQIADAITE----VPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
FAKGA + + Y + D A+GLDW++ + + + +QGNLDP L N+V+I
Sbjct: 241 MFAKGA-FFAREYFKDLDCAAVGLDWTMDIQESRRLVGTNKVLQGNLDPCLLYANNEVII 299
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L G I NLGHG+ P +P+ V ++TV+S ++
Sbjct: 300 KETQEMLHKFG-DKHIVNLGHGVYPDTNPEKVKRFIETVKSFEL 342
>gi|190575483|ref|YP_001973328.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia K279a]
gi|190013405|emb|CAQ47039.1| putative uroporphyrinogen decarboxylase [Stenotrophomonas
maltophilia K279a]
Length = 360
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 186/351 (52%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M PE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKNPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DA+G + FVE EGP+ E + + L +
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIARLAVPDMEQDLGYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + LL+
Sbjct: 129 MDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFARIKAMALNHPQALHRLLEV 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PNAK 241
+D YL AQ AG +Q+FDT G L + ++ R + RI + R
Sbjct: 189 TTDAVIAYLGAQRAAGAQALQVFDTWGGVLSPAMYREFSLRYLQRIAEGLERGEGSERTP 248
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L+ + T ++A+GLDW++ L A +QGNLDP L
Sbjct: 249 LILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEAMRRTGGRVALQGNLDPTTLYASPDA 307
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 308 IAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|218459965|ref|ZP_03500056.1| uroporphyrinogen decarboxylase [Rhizobium etli Kim 5]
Length = 320
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 195/322 (60%), Positives = 243/322 (75%), Gaps = 2/322 (0%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TLQPIRRY FDAAILFSDILVI DA
Sbjct: 1 MMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTLQPIRRYGFDAAILFSDILVIPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
+ RNVRF E GP MDPI I LN + + YL P+ +++ LR++LP+ TL+GF
Sbjct: 61 MKRNVRFTEGHGPEMDPIDEAGIGRLN--GEEVVAYLRPVLETVRRLREELPDETTLLGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA+YMI+G D R+FAY RAF LL L+DVS++YL+AQI AG D +
Sbjct: 119 CGAPWTVATYMIAGHGTPDQAPARLFAYNYPRAFEHLLMLLADVSSDYLVAQIDAGADAV 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ AG LGE EFE +A R V R+I++++ + P+A+ I+FAKGAGY LK YR+ T ++
Sbjct: 179 QIFDSWAGVLGEREFEAFAIRPVARMIASIKSRRPHARIIAFAKGAGYQLKTYRQKTGAD 238
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
AIGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +GV+ IL LG GP IFNLGH
Sbjct: 239 AIGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGVDDILQHLGHGPLIFNLGH 298
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
GITPQ DP +V LV+ VR K
Sbjct: 299 GITPQADPDHVRQLVERVRGTK 320
>gi|167818001|ref|ZP_02449681.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 91]
Length = 364
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRIVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|167921058|ref|ZP_02508149.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei BCC215]
Length = 361
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|194366811|ref|YP_002029421.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia
R551-3]
gi|194349615|gb|ACF52738.1| uroporphyrinogen decarboxylase [Stenotrophomonas maltophilia
R551-3]
Length = 360
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 186/351 (52%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M PE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKNPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DA+G + FVE EGP+ E + + L +
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIAKLAVPDMEQDLGYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + LL+
Sbjct: 129 MDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFARIKAMALNHPQALHRLLEV 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
++ YL AQ AG +Q+FDT G L + ++ R + RI + R
Sbjct: 189 TTEAVIAYLGAQRAAGAQALQVFDTWGGVLSPSMYREFSLRYLQRIAEGLERGEGNERTP 248
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L+ + T ++A+GLDW++ L A +QGNLDP L
Sbjct: 249 LILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEAMRRTGGRVALQGNLDPTTLYASPDA 307
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 308 IAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|167721814|ref|ZP_02405050.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei DM98]
Length = 364
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 183/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R++ ++R++
Sbjct: 186 RILDINAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLVQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|77464253|ref|YP_353757.1| uroporphyrinogen decarboxylase [Rhodobacter sphaeroides 2.4.1]
gi|85700415|sp|P32920|DCUP_RHOS4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|77388671|gb|ABA79856.1| Uroporphyrinogen decarboxylase [Rhodobacter sphaeroides 2.4.1]
Length = 343
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 141/341 (41%), Positives = 204/341 (59%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L+G + PPIWLMRQAGRYLPEYR R + +FL +CYTP+ E+TLQPIRR
Sbjct: 3 KTMLRALKGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ F EGPRM IT D L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFETGEGPRMSTITDMAGVTALKGRDDIHETLAPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ IL ++LP T IGF G PWTVA+YMI+G KD + AF L+D ++
Sbjct: 123 TCRILARELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKLKDTDRPAFEALMDRVT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + EYL Q+ AG +V+++FD+ AG L +FE++A RI+S ++ ++ I+F
Sbjct: 183 EATIEYLAKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVAPAKRIVSELKARFQGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ--KEGPVQGNLDPMRLVVGNQVMID 303
+ AG + T ++ + +D SV +A E VQGNLDP +V G + ++
Sbjct: 243 PREAGEGYIGFAEKTGADCVAIDNSVSPEWAAEKVQAGRTCVQGNLDPKYMVTGGEELVQ 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ +GP IFNLGHGITP+ DP+NV LV+T+R +
Sbjct: 303 ATKRVVEAFRNGPHIFNLGHGITPEADPENVTLLVETIRGK 343
>gi|110347606|ref|NP_033504.2| uroporphyrinogen decarboxylase [Mus musculus]
gi|134035904|sp|P70697|DCUP_MOUSE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|14198090|gb|AAH08109.1| Uroporphyrinogen decarboxylase [Mus musculus]
gi|74192377|dbj|BAE43002.1| unnamed protein product [Mus musculus]
gi|123121530|emb|CAM23809.1| uroporphyrinogen decarboxylase [Mus musculus]
Length = 367
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP---- 238
L+DV YLI Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPERVGAFVDAVHKHS 361
>gi|91785729|ref|YP_560935.1| uroporphyrinogen decarboxylase [Burkholderia xenovorans LB400]
gi|123167896|sp|Q13SQ6|DCUP_BURXL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91689683|gb|ABE32883.1| Uroporphyrinogen decarboxylase HemE [Burkholderia xenovorans LB400]
Length = 366
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 128/353 (36%), Positives = 185/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+
Sbjct: 7 NDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPAFATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYLL 121
RY DAAILFSDIL + DA+G + FV EGP+ P+ T++ P+ID L Y
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFARPVRTEDDVARLAVPDIDATLRY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 125 -VTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + +++S ++R
Sbjct: 184 MHRILDVNARAVAAYLNAQIEAGAQAVMIFDTWGGALADGVYQRFSLHYIQQVVSQLKRD 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L T +A+GLDW+V LS A E + + +QGN+DP
Sbjct: 244 HDGEKVPVITFTKGGGLWLDEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSV 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 303 LFAPPAAIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|254186483|ref|ZP_04893000.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pasteur
52237]
gi|157934168|gb|EDO89838.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei Pasteur
52237]
Length = 410
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 53 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 112
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 113 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 171
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 172 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 231
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 232 RILDINAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 291
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 292 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 350
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 351 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 401
>gi|171060194|ref|YP_001792543.1| uroporphyrinogen decarboxylase [Leptothrix cholodnii SP-6]
gi|170777639|gb|ACB35778.1| uroporphyrinogen decarboxylase [Leptothrix cholodnii SP-6]
Length = 356
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 181/347 (52%), Gaps = 8/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ + PIWLMRQAGRYLPEY R K +F+ + ++ E+TLQP+
Sbjct: 6 QNDNFLRALRRQPTDHTPIWLMRQAGRYLPEYCATRAKAGSFMGLATNVDFATEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D + L
Sbjct: 66 ERYALDAAILFSDILTVPDAMGLGLSFAAGEGPRFATPVRDEAAVAALEAPD--MAKLQY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + YQ + +L
Sbjct: 124 VFDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGRGSDDYRLVKTMLYQRPDLMHRMLA 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R++
Sbjct: 184 VTADSVAAYLNAQIEAGAQAVMIFDSWGGVLADGAFQTFSLAYTRRVLAQLKREHDGQQI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L D++A+GLDW+V L A + + +QGNLDP L +
Sbjct: 244 PRIVFTKGGGLWLDEIAA-CDTDAVGLDWTVNLDQARRRVGHKVALQGNLDPNVLFASPE 302
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ A+LD G P IFNLGHGI+ P+ V LV V +
Sbjct: 303 QITREAQAVLDSFGPHPGHIFNLGHGISQFTPPEAVSVLVDAVHAHS 349
>gi|67643096|ref|ZP_00441845.1| uroporphyrinogen decarboxylase [Burkholderia mallei GB8 horse 4]
gi|121600162|ref|YP_994628.1| uroporphyrinogen decarboxylase [Burkholderia mallei SAVP1]
gi|124385903|ref|YP_001027560.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10229]
gi|126449299|ref|YP_001082542.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10247]
gi|167000134|ref|ZP_02265957.1| uroporphyrinogen decarboxylase [Burkholderia mallei PRL-20]
gi|254174809|ref|ZP_04881470.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 10399]
gi|254201542|ref|ZP_04907906.1| uroporphyrinogen decarboxylase [Burkholderia mallei FMH]
gi|254206878|ref|ZP_04913229.1| uroporphyrinogen decarboxylase [Burkholderia mallei JHU]
gi|254357433|ref|ZP_04973707.1| uroporphyrinogen decarboxylase [Burkholderia mallei 2002721280]
gi|166234233|sp|A3MQK6|DCUP_BURM7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234234|sp|A2S6J1|DCUP_BURM9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234235|sp|A1V8S5|DCUP_BURMS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121228972|gb|ABM51490.1| uroporphyrinogen decarboxylase [Burkholderia mallei SAVP1]
gi|124293923|gb|ABN03192.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10229]
gi|126242169|gb|ABO05262.1| uroporphyrinogen decarboxylase [Burkholderia mallei NCTC 10247]
gi|147747436|gb|EDK54512.1| uroporphyrinogen decarboxylase [Burkholderia mallei FMH]
gi|147752420|gb|EDK59486.1| uroporphyrinogen decarboxylase [Burkholderia mallei JHU]
gi|148026497|gb|EDK84582.1| uroporphyrinogen decarboxylase [Burkholderia mallei 2002721280]
gi|160695854|gb|EDP85824.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 10399]
gi|238524346|gb|EEP87779.1| uroporphyrinogen decarboxylase [Burkholderia mallei GB8 horse 4]
gi|243063938|gb|EES46124.1| uroporphyrinogen decarboxylase [Burkholderia mallei PRL-20]
Length = 364
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 186 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGGYQRFSLDYVRRVLAQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|83941601|ref|ZP_00954063.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. EE-36]
gi|83847421|gb|EAP85296.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. EE-36]
Length = 349
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 149/342 (43%), Positives = 204/342 (59%), Gaps = 1/342 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQP
Sbjct: 6 TQSKTILRSLAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELATEVTLQP 65
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + + L P
Sbjct: 66 IRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDQLRPVGDIHETLNP 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I+Q++ L +LP TLIGF GAPWTVA+YMI+G KD G + Q++ F LLD
Sbjct: 126 IYQTVRNLAGELPRETTLIGFAGAPWTVATYMIAGQGTKDQGPAHLLRTQDNALFEKLLD 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EY+ AQI AG +V++IFD+ AG L FE YA I +++++P
Sbjct: 186 LITKATIEYMSAQIDAGAEVMKIFDSWAGSLPGDAFEKYALAPAREITQELKKRHPGIPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + + T + + LD SV +A + +Q +G VQGNL +V G Q +
Sbjct: 246 IGFPREAGDKYIGFAKATGVDCVALDNSVSADWAAKHVQVDGCVQGNLASTHMVTGGQAL 305
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+D I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 306 VDETRQIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVRE 347
>gi|217424005|ref|ZP_03455505.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 576]
gi|217393068|gb|EEC33090.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 576]
Length = 364
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 183/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 7 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLRLAKQPDYATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 67 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 125
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 126 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 185
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R++ ++R++
Sbjct: 186 RILDINAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLVQLKREHD 245
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 246 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 305 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|76809875|ref|YP_331586.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710b]
gi|76579328|gb|ABA48803.1| uroporphyrinogen decarboxylase [Burkholderia pseudomallei 1710b]
Length = 405
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 48 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 107
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 108 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 166
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 167 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 226
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 227 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYVRRVLAQLKREHD 286
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 287 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 345
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 346 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 396
>gi|254524780|ref|ZP_05136835.1| uroporphyrinogen decarboxylase [Stenotrophomonas sp. SKA14]
gi|219722371|gb|EED40896.1| uroporphyrinogen decarboxylase [Stenotrophomonas sp. SKA14]
Length = 360
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 129/351 (36%), Positives = 187/351 (53%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++L L+ ++ P+WLMRQAGRYLPEYR R K +FL M TPE E+TLQP+
Sbjct: 9 RNDRLLRALRREPVDCTPVWLMRQAGRYLPEYRATRAKAGSFLAMAKTPEIACEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DA+G + FVE EGP+ E + + L +
Sbjct: 69 RRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDEAAIAKLAVPDMEQDLGYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG KD + + A + +A + LL+
Sbjct: 129 MDAVRLIRRELDGQVPLIGFSGSPWTLACYMVEGGGSKDFSRIKAMALNHPQALHRLLEV 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PNAK 241
++ YL AQ AG +Q+FDT G L + ++ R + RI + R
Sbjct: 189 TTEAVIAYLGAQRAAGAQALQVFDTWGGVLSPAMYREFSLRYLQRIAQGLERGEGSERTP 248
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L+ + T ++A+GLDW++ L A +QGNLDP L
Sbjct: 249 LILFGKGTGLHLEALSQ-TGADALGLDWTLDLDEALRRTGGRVALQGNLDPTTLYASPDA 307
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD +G +FNLGHG++P +DP +V LV V +
Sbjct: 308 IAAAAARVLDTYAAGNGGSREGHVFNLGHGMSPDMDPAHVQVLVDAVHAHS 358
>gi|119900268|ref|YP_935481.1| uroporphyrinogen decarboxylase [Azoarcus sp. BH72]
gi|166234231|sp|A1KCN9|DCUP_AZOSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119672681|emb|CAL96595.1| uroporphyrinogen decarboxylase [Azoarcus sp. BH72]
Length = 358
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 126/350 (36%), Positives = 189/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + L L P+WLMRQAGRYLPEY + RK+ +FL++C +P E+T
Sbjct: 1 MSRLKNDTFLRALLRQPTEYTPVWLMRQAGRYLPEYCETRKRAGSFLNLCKSPALACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ RY+ DAAILFSDIL + DA+G + F E EGPR + E + N ++
Sbjct: 61 LQPLARYDLDAAILFSDILTVPDAMGLGLYFAEGEGPRFERPLRDEWEIRNLSVPDPHAE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++S +R+ L + LIGF G+PWT+A YM+ GG D+ + + AY +
Sbjct: 121 LQYVMDAVSEIRRALDGSVPLIGFSGSPWTLACYMVEGGSSDDYRRIKTMAYSRPDLLHH 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L +D +YL AQI AG + +FD+ G L E + ++ R + R++ + R+
Sbjct: 181 ILGVTADAVVQYLNAQIEAGAQAVMVFDSWGGVLAEAAYREFSLRYLQRVVDGLIREREG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F KG G L++ + S+A+GLDW++ + A + + +QGNLDP L
Sbjct: 241 QRVPSIVFTKGGGIWLESIAAI-GSDAVGLDWTMDIGRARALVGQRVALQGNLDPSILFA 299
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +LD G P +FNLGHGI+ P+NV LV TV
Sbjct: 300 PPEAVAAEARRVLDAYGPHPGHVFNLGHGISQFTPPENVSVLVDTVHDHS 349
>gi|307731455|ref|YP_003908679.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1003]
gi|307585990|gb|ADN59388.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1003]
Length = 366
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 127/356 (35%), Positives = 184/356 (51%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + P+WLMRQAGRYLPEY R + +FL + P + E+TLQ
Sbjct: 4 NLLNDTFLRALLRQPTDYTPVWLMRQAGRYLPEYNATRSRAGSFLGLAKNPAFATEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLN 118
P+ RY DAAILFSDIL + DA+G + FV EGP P+ T++ P+ID L
Sbjct: 64 PLERYPLDAAILFSDILTVPDAMGLGLEFVAGEGPTFARPVRTEDDVARLAVPDIDATLR 123
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + ++ +R+ L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 124 Y---VTDAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRIVKSMLYAR 180
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ ++ A YL AQI AG + IFDT G L + ++ ++ + R++ +
Sbjct: 181 PDLMHRILEINANAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLHYIQRVVDQL 240
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
R+ I+F KG G L T +A+GLDW+V L A E + + +QGN+D
Sbjct: 241 TRERDGEKVPVIAFTKGGGLWLDEIAD-TGVDAVGLDWTVNLRKARELVGGKVALQGNID 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + A+LD G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 300 PSVLFAPPASIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPENVAELVDEVHRHS 355
>gi|114765838|ref|ZP_01444931.1| uroporphyrinogen decarboxylase [Pelagibaca bermudensis HTCC2601]
gi|114541837|gb|EAU44874.1| uroporphyrinogen decarboxylase [Roseovarius sp. HTCC2601]
Length = 343
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 142/339 (41%), Positives = 203/339 (59%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FD AILF+DIL++ ALG ++ FV EGPR+ ITTQ + ++ + L PI++
Sbjct: 63 YGFDGAILFADILLVPQALGNDLWFVTGEGPRLSTITTQAEFDKLGRGEMIHDTLSPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR++LP TLIGF GAPWTVA+YMI+G KD G +N F +++ L+
Sbjct: 123 TVKILRRELPEETTLIGFAGAPWTVATYMIAGRGTKDQGPAHALKAENRPLFEAIIERLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL AQ+ AG +V+++FD+ AG L +F YA I ++ ++P I F
Sbjct: 183 EATIDYLSAQVEAGAEVVKLFDSWAGSLSGEDFRRYALEPARIITQELKARHPGLPVIVF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL +V G ++
Sbjct: 243 PRQAGQGYVGFHEATGADCVAVDDSVSPEWAAEHVQVSGCVQGNLASSHMVTGGDALVTE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 303 TLRVVKAFSKGPHIFNLGHGITPDADPENVQLMIDTVRE 341
>gi|83952839|ref|ZP_00961569.1| uroporphyrinogen decarboxylase [Roseovarius nubinhibens ISM]
gi|83835974|gb|EAP75273.1| uroporphyrinogen decarboxylase [Roseovarius nubinhibens ISM]
Length = 355
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 151/344 (43%), Positives = 209/344 (60%), Gaps = 1/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL L G + PPIW+MRQAGRYLPEYR R + +FL +CY + E+TL
Sbjct: 11 MTRSDKPILRALAGETLPTPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLATEVTL 70
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT + + L
Sbjct: 71 QPIRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITDAQGLNALKPVSDIHETL 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI+Q++ L LP+ TLIGF GAPWTVA+YMI+G D G +N F L
Sbjct: 131 NPIYQTLRNLSGALPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENRPVFEAL 190
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD +++ + EYL AQI AG +VI++FD+ AG L + +F YA RII+A++ ++P
Sbjct: 191 LDRITEATIEYLSAQIDAGAEVIKLFDSWAGSLNDEDFAAYALAPAQRIIAALKARHPET 250
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F +GAG + + R T ++ + LD V ++A +Q +G VQGNL +V G +
Sbjct: 251 PIIAFPRGAGPRYEGFARATGADCVALDDGVDAAWAAAHVQIDGCVQGNLASSHMVTGGE 310
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ +AI+D L GP IFNLGHGITP DP NV ++ VR+
Sbjct: 311 ALVQETHAIVDALSHGPHIFNLGHGITPDADPDNVQRMIDAVRT 354
>gi|148698629|gb|EDL30576.1| mCG14438 [Mus musculus]
Length = 367
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 182/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP---- 238
L+DV YLI Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGIELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRYIANLGHGLYPDMDPERVGAFVDAVHKHS 361
>gi|53724020|ref|YP_104466.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 23344]
gi|52427443|gb|AAU48036.1| uroporphyrinogen decarboxylase [Burkholderia mallei ATCC 23344]
Length = 405
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 184/351 (52%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQP+
Sbjct: 48 NDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQPLE 107
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L +
Sbjct: 108 RFPLDAAILFSDILTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGAT-LGYV 166
Query: 124 FQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY +
Sbjct: 167 TDAVREIRRALTDGEGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPDLMH 226
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + A YL AQI AG + IFDT G L + ++ ++ V R+++ ++R++
Sbjct: 227 RILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGGYQRFSLDYVRRVLAQLKREHD 286
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I+F KG G L+ T +A+GLDW+V L A E + +QGNLDP L
Sbjct: 287 GARVPAIAFTKGGGLWLEELAA-TGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILF 345
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 346 APPEAIRAEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 396
>gi|89899631|ref|YP_522102.1| uroporphyrinogen decarboxylase [Rhodoferax ferrireducens T118]
gi|122479905|sp|Q220I2|DCUP_RHOFD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89344368|gb|ABD68571.1| uroporphyrinogen decarboxylase [Rhodoferax ferrireducens T118]
Length = 369
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 118/354 (33%), Positives = 179/354 (50%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + PIW+MRQAGR+LPEYR R K +F+ + +Y E+TLQP+
Sbjct: 14 KNDTFLRACLRQATDYTPIWMMRQAGRFLPEYRATRAKAGSFMGLATNTDYATEVTLQPV 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL + DA+G + F EGP+ P+ + D ++ L
Sbjct: 74 ERFPIDAAILFSDILTVPDAMGLGLSFALGEGPKFAHPVQDEAAVAKLAVPD--MDKLRY 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+ YM+ G D+ + Y + +L
Sbjct: 132 VFDAVTSIRKALNGKVPLIGFSGSPWTLGCYMVEGAGSDDYRLVKTMLYSRPDLMHRILQ 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+D A+YL AQI AG + IFD+ G L + F+ ++ R+++ ++R++
Sbjct: 192 INADSVAQYLNAQIEAGAQAVMIFDSWGGVLADGAFQEFSLAYTARVLAQLKREHNGARI 251
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G LK L D + +GLDW+V L+ A + + +QGN+DP L
Sbjct: 252 PRIVFTKGGGMWLKEMG-LLDCDVLGLDWTVNLAKARAIVGDSKALQGNMDPNVLFASPA 310
Query: 300 VMIDGVNAILDVLG--------SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G IFNLGHGI+ P++V LV+ V
Sbjct: 311 QIAAEATRVLDSFGTPYAGEGTGPTHIFNLGHGISQHTPPEHVAALVQAVHEHS 364
>gi|83855077|ref|ZP_00948607.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. NAS-14.1]
gi|83842920|gb|EAP82087.1| uroporphyrinogen decarboxylase [Sulfitobacter sp. NAS-14.1]
Length = 349
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 149/342 (43%), Positives = 204/342 (59%), Gaps = 1/342 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQP
Sbjct: 6 TQSKTILRSLAGETLPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELATEVTLQP 65
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + + L P
Sbjct: 66 IRRYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDQLRPVGDIHETLNP 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I+Q++ L +LP TLIGF GAPWTVA+YMI+G KD G + Q++ F LLD
Sbjct: 126 IYQTVRNLAGELPRETTLIGFAGAPWTVATYMIAGQGTKDQGPAHLLRTQDNALFEKLLD 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + EY+ AQI AG +V++IFD+ AG L FE YA I +++++P
Sbjct: 186 LITKATIEYMSAQIDAGAEVMKIFDSWAGSLPGDAFEKYALTPAREITQELKKRHPGIPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F + AG + + T + + LD SV +A + +Q +G VQGNL +V G Q +
Sbjct: 246 IGFPREAGDKYIGFAKATGVDCVALDNSVSADWAAKHVQVDGCVQGNLASTHMVTGGQAL 305
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+D I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 306 VDETRQIVKAFSKGPHIFNLGHGITPDADPDNVQRMIDTVRE 347
>gi|303256396|ref|ZP_07342410.1| uroporphyrinogen decarboxylase [Burkholderiales bacterium 1_1_47]
gi|331001476|ref|ZP_08325094.1| uroporphyrinogen decarboxylase [Parasutterella excrementihominis
YIT 11859]
gi|302859887|gb|EFL82964.1| uroporphyrinogen decarboxylase [Burkholderiales bacterium 1_1_47]
gi|329568205|gb|EGG50022.1| uroporphyrinogen decarboxylase [Parasutterella excrementihominis
YIT 11859]
Length = 356
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 128/351 (36%), Positives = 187/351 (53%), Gaps = 7/351 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L L + PIWLMRQAGRYLPEYRQ R + +F+ + P Y E+TL
Sbjct: 1 MKLQNDTFLRALCKLPTDYTPIWLMRQAGRYLPEYRQTRSEAGSFMGLATNPHYACEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ RY DAAILFSDIL I DA+G + FV EGP+ E + + + L
Sbjct: 61 QPVDRYPLDAAILFSDILTIPDAMGLGLSFVAGEGPKFAKPVQDEAAVKALYVPDPSDKL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +++ L N I LIGF G+P+T+A YM+ GG ++ + + Y+ FN +
Sbjct: 121 KYVTDAVCEIKRALNNRIPLIGFSGSPFTLACYMVEGGSSSNYRKVKEMMYRRPDLFNEI 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L+ +D YL AQI +GVD + +FDT G L + ++ + RI+++V+R+
Sbjct: 181 LEKNTDAVIAYLNAQIESGVDAVMVFDTWGGTLSHEAYLKFSLPCLKRIVNSVKRERHGQ 240
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
I F KG +K + ++A+GLDW+V L L Q + +QGNLDP L G
Sbjct: 241 KIPSIVFTKGCAPWVKEISEI-GADAMGLDWTVSLGEVRALTQDKVALQGNLDPSVLFAG 299
Query: 298 NQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +++ G+G +FNLGHGI DP+ V LV V S
Sbjct: 300 EDVVRQEARKVIEDFGHVGNGGHVFNLGHGIDKDTDPEVVAALVDEVHSYS 350
>gi|120437550|ref|YP_863236.1| uroporphyrinogen decarboxylase [Gramella forsetii KT0803]
gi|166234251|sp|A0M6C4|DCUP_GRAFK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117579700|emb|CAL68169.1| uroporphyrinogen decarboxylase [Gramella forsetii KT0803]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 113/346 (32%), Positives = 192/346 (55%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ L+G + PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T+ PI
Sbjct: 3 KNDLLLKALKGESVERPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCRTPELATEITVMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
R+ DAAILFSDILV+ A+ V GP + +PI + + + P+++ L Y
Sbjct: 62 RQIGPDAAILFSDILVVPQAMNIEVEMKPGVGPWLPNPIDSPKKVEQVIVPDVNEELGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++I + +++L + + LIGF G+PWT+ Y + G K + + F + N A + L
Sbjct: 121 --VFEAIKMTKQELNDEVPLIGFAGSPWTILCYCVQGQGSKTFDKAKRFCFMNPIAAHTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +Q+FD+ G L +++ ++ + + +II A++ +
Sbjct: 179 LQKITDTTIAYLKEKVKAGVDAVQLFDSWGGLLEPKDYQEFSWKYMQQIIEALKDE---V 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I++ KG + L + + + A+G+DW+ A L E +QGN DP RL
Sbjct: 236 PVIAYGKGCWFALDKMAK-SGAAALGVDWTCEARNARYLSGGEITLQGNFDPARLYSKPI 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ VN ++ G +I NLGHGI P + N V V+ K
Sbjct: 295 EIKYMVNDMIKAFGKDRYIANLGHGILPNIPVDNAKAFVDAVKEYK 340
>gi|15967094|ref|NP_387447.1| uroporphyrinogen decarboxylase [Sinorhizobium meliloti 1021]
gi|15076367|emb|CAC47920.1| Probable uroporphyrinogen decarboxylase [Sinorhizobium meliloti
1021]
Length = 319
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 193/321 (60%), Positives = 240/321 (74%), Gaps = 2/321 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR +R K +FLD+CYTP+ VE+TLQPIRRY FDAAILFSDILVI D L
Sbjct: 1 MRQAGRYLPEYRAVRAKAGSFLDLCYTPDLAVEVTLQPIRRYGFDAAILFSDILVIPDGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E +GPRMDPI I L+P D + +L P+F+++S LR++LP TL+GFC
Sbjct: 61 KRNVRFEEGQGPRMDPIDEDGIARLSP--DGVIAHLAPVFETVSRLRRELPTETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY++ +AF LL L+D+SA+YL+ QI AG D +Q
Sbjct: 119 GAPWTVATYMIAGRGTPDQAPARLFAYRHPKAFERLLTLLADISADYLVKQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EF+ +A V R+I++VR + P+AK I+FAKGAG +LKNYR+ T ++A
Sbjct: 179 IFDSWAGVLGEEEFQRFAIEPVRRMIASVRARRPSAKIIAFAKGAGLLLKNYRQATGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDW VPL+FA ELQK+GPVQGNLDP+R+V G G + ILDVLG GP IFNLGHG
Sbjct: 239 IGLDWLVPLAFAAELQKDGPVQGNLDPVRVVAGGAAQEHGTDRILDVLGQGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEK 345
ITP DP +V LV VR +
Sbjct: 299 ITPDADPNHVAALVARVRGSR 319
>gi|33598623|ref|NP_886266.1| uroporphyrinogen decarboxylase [Bordetella parapertussis 12822]
gi|45476877|sp|Q7W3B3|DCUP_BORPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33574752|emb|CAE39411.1| uroporphyrinogen decarboxylase [Bordetella parapertussis]
Length = 358
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 178/349 (51%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+
Sbjct: 7 KNDVFLRALLREPVPYTPIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + A+G + F EGPR P+ + D ++ L
Sbjct: 67 ARYPLDAAILFSDILTVPHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPD--MDSLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++ +R++L + LIGF G+PWT+A YM+ G D+ + Y + +L+
Sbjct: 125 VFDAVRTIRRELDGRVPLIGFAGSPWTIACYMVEGRGSDDYRLIKSMLYGRPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + YL AQI AG + +FD+ G L + F+ ++ R++ + R+
Sbjct: 185 INAEATRHYLNAQIDAGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F+KG G L+ +A+GLDW+V L A + +QGNLDPM L G Q
Sbjct: 245 PVIVFSKGGGQWLEEIAA-CGCDAVGLDWTVNLGTARRRVADAVALQGNLDPMTLFGGAQ 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ LD G G +FNLGHGI+ P+ V +LV V +
Sbjct: 304 AVRAEARRTLDAFGPVGKGGHVFNLGHGISQYSPPEVVSELVDEVHTYS 352
>gi|304392712|ref|ZP_07374652.1| uroporphyrinogen decarboxylase [Ahrensia sp. R2A130]
gi|303295342|gb|EFL89702.1| uroporphyrinogen decarboxylase [Ahrensia sp. R2A130]
Length = 342
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 168/344 (48%), Positives = 228/344 (66%), Gaps = 3/344 (0%)
Query: 1 MNERKQK-ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E+ ++ ++ V+ G + PPIW+MRQAGRYLPEY+ RK+ FLD+CY PE +E+T
Sbjct: 1 MVEKHERAVMRVMAGETLERPPIWMMRQAGRYLPEYKATRKQAGGFLDLCYNPELAIEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPIRR+ FDAAILFSDILVI DALG +VRF E GP + P+ I L P + L +
Sbjct: 61 LQPIRRFGFDAAILFSDILVIPDALGMDVRFEEGRGPILKPVDLAHIDRLTP--EGTLEH 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+ +++ LR +LP+ TL+GFCGAPWTVA+YMI+G D G R F+ + AF
Sbjct: 119 LAPVLETVKGLRSQLPSETTLLGFCGAPWTVATYMIAGHGTPDQGPARQFSLNHPEAFAK 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++D L + SA YL+AQ+ AG D +QIFD+ A L E +F+ + V +I+ VR + P+
Sbjct: 179 MMDVLVEASAAYLVAQLKAGADAVQIFDSWASVLDEAQFQLWCVEPVKAVIAKVRAEVPD 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
AK I F KG G +Y T + +GLDW++P SFA ELQK+ PVQGNLDP RL+ G
Sbjct: 239 AKIIGFPKGVGAFYADYAAQTGIDMLGLDWTIPFSFAKELQKKTPVQGNLDPNRLIAGGS 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +GV+AIL+ L GP +FNLGHGITP + +V ++ VR
Sbjct: 299 ALDEGVDAILENLSDGPLVFNLGHGITPLTEIAHVEQMIARVRG 342
>gi|319790080|ref|YP_004151713.1| uroporphyrinogen decarboxylase [Thermovibrio ammonificans HB-1]
gi|317114582|gb|ADU97072.1| uroporphyrinogen decarboxylase [Thermovibrio ammonificans HB-1]
Length = 348
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 128/343 (37%), Positives = 193/343 (56%), Gaps = 4/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL +G + PIW+MRQAGRY YR+IR K +F+++C PE E+TL
Sbjct: 1 MSLKDHPILRAARGEKTDYTPIWIMRQAGRYSERYRRIRAKAGSFMELCRNPELAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
PI DAAILFSDILV + +G V+FVE +GP + P + L
Sbjct: 61 IPIEEIGVDAAILFSDILVPVEKMGIEVKFVEGKGPVLSPKVETADDARRLKVPEPEKDL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +++++L + LIGF GAP+T+ASYM+ GG K++ + + + ++ L
Sbjct: 121 PYVLETIQLIKRRLTDR-PLIGFSGAPFTLASYMLEGGSSKNYINAKSAMWNSPELWDTL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L D EYL AQI AGVD++QIFD+ G L ++E + +++ A++ ++P+
Sbjct: 180 MGKLVDTVVEYLSAQIEAGVDLVQIFDSWMGVLSREDYERFVFPYTEKVVKALKERHPSV 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F A ++L+ RL + IGLDW + FALE + +QGNLDP+ L +
Sbjct: 240 PIIHFGVNASHLLEVNNRLP-VDVIGLDWKTEIPFALER-IDKSIQGNLDPVALFADEKT 297
Query: 301 MIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL + L + IFNLGHGI P DP LV+TV
Sbjct: 298 ITEKVEKILTEGLKARGHIFNLGHGILPPTDPAKARFLVETVH 340
>gi|295131993|ref|YP_003582669.1| uroporphyrinogen decarboxylase [Zunongwangia profunda SM-A87]
gi|294980008|gb|ADF50473.1| uroporphyrinogen decarboxylase [Zunongwangia profunda SM-A87]
Length = 342
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 111/346 (32%), Positives = 189/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLP++ ++++K+ +F C TPE E+T PI
Sbjct: 3 KNDLFLRALKGETVERPPVWMMRQAGRYLPDFMKLKEKY-DFFTRCRTPELAAEITTMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYL 120
+ DAAILFSDILV+ A+ + GP + +P+ + ++ P++ L Y
Sbjct: 62 EQVGTDAAILFSDILVVPQAMNVEIEMKPGVGPFLPNPVRSPLDVNDIIVPDVYEELGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I + +++L + + LIGF G+PWT+ Y++ G K+ + + F ++ A L
Sbjct: 121 --VYDAIKLTKQRLNDEVPLIGFAGSPWTILCYLVQGQGSKNFDKAKEFCFKRPDAAQVL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD IQIFD+ G L +++ Y+ + + +II A++ +
Sbjct: 179 LQKITDTTISYLKGKVKAGVDAIQIFDSWGGLLSPTDYQTYSWKYIQQIIDALKDE---I 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I++ KG + LK + + + A+G+DW+ A L + +QGN DP RL Q
Sbjct: 236 PVIAYGKGCWFALKEMSQ-SGAAALGVDWTCSAMNARYLSGGQITLQGNFDPSRLYSSPQ 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++D G +I NLGHGI P + +N V V+ K
Sbjct: 295 EIKKMTTQMIDEFGKDRYIANLGHGILPDIPVRNAQAFVDAVKEYK 340
>gi|85705299|ref|ZP_01036398.1| uroporphyrinogen decarboxylase [Roseovarius sp. 217]
gi|85670172|gb|EAQ25034.1| uroporphyrinogen decarboxylase [Roseovarius sp. 217]
Length = 360
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 152/344 (44%), Positives = 207/344 (60%), Gaps = 1/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY + E+TL
Sbjct: 16 MMPAQKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREQAGDFLSLCYNSDLATEVTL 75
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ IT + +D L
Sbjct: 76 QPIRRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITDRAGLEKLKPVDEIHEVL 135
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++Q++ L LP TLIGF GAPWTVA+YMI+G D G +N F +
Sbjct: 136 NPVYQTVRNLAGALPKDTTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKEVFEGI 195
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+ + EYL AQI AG +VI++FD+ AG L +FENYA RIIS ++ ++P
Sbjct: 196 IDRLTAGTIEYLSAQIEAGAEVIKLFDSWAGSLKGDDFENYAVAPAKRIISELKARHPGI 255
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + T ++ + +D SV ++A E +QK+G VQGNL +V G
Sbjct: 256 PIIAFPREAGDNYMGFHAKTGADCVAVDDSVSAAWAAENVQKDGCVQGNLKSSHMVTGGD 315
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ AI+D GP IFNLGHGITP DP NV ++ TVR
Sbjct: 316 ALVRETRAIVDAFRKGPHIFNLGHGITPDADPDNVQVMIDTVRG 359
>gi|193697420|ref|XP_001952264.1| PREDICTED: uroporphyrinogen decarboxylase-like [Acyrthosiphon
pisum]
Length = 349
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 126/351 (35%), Positives = 201/351 (57%), Gaps = 11/351 (3%)
Query: 1 MN---ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
MN + +IL +G ++ P+W+MRQAGRYLPE+R++R ++ +F +C TPE E
Sbjct: 1 MNFPALKNDRILRAARGEEVDRIPVWVMRQAGRYLPEFRELRSRY-DFFTICRTPELACE 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDL 115
+TLQPI+RY+ DA+I+FSDILVI ALG V + GP + DP+ ++ LN +ID+
Sbjct: 60 VTLQPIQRYDLDASIIFSDILVIVQALGMIVEMQPSVGPVIPDPLKEPIDLDRLNQSIDV 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L +F++I++ R +L + LIGF GAPWT+ YMI GG K + + + Y+
Sbjct: 120 K-QELGYVFEAITLTRHRLNGQVPLIGFTGAPWTLMCYMIEGGGSKTMSKAKKWLYKYPE 178
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
LL L+D+ +YLI Q++AG ++Q+F+++A L F+ ++ + I S V+
Sbjct: 179 ESKKLLQILTDIIVKYLIEQVNAGAQMLQVFESNAEYLNSELFDRFSGPYLSAICSRVKN 238
Query: 236 KYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
+ + FAKG Y +K D + IGLDW++ A + + +QGNLDP
Sbjct: 239 ELKGNSVPMVVFAKGGHYAMKQLSTF-DYDVIGLDWTIDPDEARKIVGNNITLQGNLDPC 297
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L ++ + + V ++ +I NLGHGI P VDP+++ ++ V
Sbjct: 298 SLYGPSEQIKEMVKSMASKFTKHRYIANLGHGIYPDVDPEHLRVMIDAVHE 348
>gi|163854651|ref|YP_001628949.1| uroporphyrinogen decarboxylase [Bordetella petrii DSM 12804]
gi|229889830|sp|A9HY51|DCUP_BORPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163258379|emb|CAP40678.1| uroporphyrinogen decarboxylase [Bordetella petrii]
Length = 358
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 186/349 (53%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+
Sbjct: 7 KNDVFLRALLRQPVPYTPIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYAAEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY+ DAAILFSDIL + A+G + F EGPR P+ T++ D + L
Sbjct: 67 ARYDLDAAILFSDILTVPHAMGLGLDFAPGEGPRFARPLRTEDDVARLAVPD--MESLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++++R++L + LIGF G+PWT+A YM+ G D+ + Y + +L+
Sbjct: 125 VFDAVAVIRRELDGKVPLIGFAGSPWTIACYMVEGRGSDDYRLIKTMLYARPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
+ + +YL AQI AG + +FD+ G L + F+ ++ ++++ + R++
Sbjct: 185 VNAQATLQYLNAQIQAGAQAVMLFDSWGGVLADGLFQQFSLAYTRKVVAGLIREHQGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G L+ +AIGLDW+V L A + + +QGNLDPM L G++
Sbjct: 245 PAIVFTKGGGQWLEAIAA-CGCDAIGLDWTVNLGQARQRTGDAVALQGNLDPMTLFGGSE 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ LD G+G +FNLGHGI+ P+ V +LV V +
Sbjct: 304 AIRAEARRTLDAFGPVGTGGHVFNLGHGISQYTPPEAVAELVDEVHTYS 352
>gi|33603574|ref|NP_891134.1| uroporphyrinogen decarboxylase [Bordetella bronchiseptica RB50]
gi|45476881|sp|Q7WEN2|DCUP_BORBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33577699|emb|CAE34964.1| uroporphyrinogen decarboxylase [Bordetella bronchiseptica RB50]
Length = 358
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 177/349 (50%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+
Sbjct: 7 KNDVFLRALLREPVPYTPIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + A+G + F EGPR P+ + D ++ L
Sbjct: 67 ARYPLDAAILFSDILTVPHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPD--MDSLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++ +R++L + LIGF G+PWT+A YM+ G D+ + Y + +L+
Sbjct: 125 VFDAVRTIRRELDGRVPLIGFAGSPWTIACYMVEGRGSDDYRLIKSMLYGRPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + YL AQI AG + +FD+ G L + F+ ++ R++ + R+
Sbjct: 185 INAEATRHYLNAQIDAGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G L+ +A+GLDW+V L A + +QGNLDPM L G Q
Sbjct: 245 PVIVFTKGGGQWLEEIAA-CGCDAVGLDWTVNLGTARRRVADAVALQGNLDPMTLFGGAQ 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ LD G G +FNLGHGI+ P+ V +LV V +
Sbjct: 304 AVRAEARRTLDAFGPVGKGGHVFNLGHGISQYSPPEVVSELVDEVHTYS 352
>gi|84516582|ref|ZP_01003941.1| uroporphyrinogen decarboxylase [Loktanella vestfoldensis SKA53]
gi|84509618|gb|EAQ06076.1| uroporphyrinogen decarboxylase [Loktanella vestfoldensis SKA53]
Length = 376
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 146/341 (42%), Positives = 207/341 (60%), Gaps = 1/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+K+ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY PE E+TLQPI
Sbjct: 35 QKKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREQAGDFLKLCYNPELAAEVTLQPI 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT E ++ L P+
Sbjct: 95 RRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTPEELGRLKPVEDIHETLNPV 154
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ IL ++LP TLIGF GAPWTVA+YMI+G D G N F ++
Sbjct: 155 YETVKILSQELPKETTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKAANRPLFEGIMHR 214
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ + YL QI AG + +++FD+ AG L +F ++ + + RI +A++ K+P I
Sbjct: 215 LTEGTIAYLSKQIEAGAECVKLFDSWAGSLQGDDFTEFSIKPMQRITAALKEKHPGIPVI 274
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+F +GAG T ++ + +D V ++ A +QK+G VQGNL +V G Q ++
Sbjct: 275 AFPRGAGTKYAGVHAATGADCVAVDDGVDAAWVADHVQKDGCVQGNLASSHMVTGGQGLV 334
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D I D L G IFNLGHGITP+ DP NV ++ TVR
Sbjct: 335 DETRRICDALSGGAHIFNLGHGITPEADPANVQLMIDTVRG 375
>gi|53802347|ref|YP_112864.1| uroporphyrinogen decarboxylase [Methylococcus capsulatus str. Bath]
gi|81683000|sp|Q60BY1|DCUP_METCA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|53756108|gb|AAU90399.1| uroporphyrinogen decarboxylase [Methylococcus capsulatus str. Bath]
Length = 350
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 126/344 (36%), Positives = 197/344 (57%), Gaps = 10/344 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ L + P+W+MRQAGRYLPEYR++R++ +F+++C +PE E+TLQP+ RY
Sbjct: 5 FIRALLRQPVERTPVWMMRQAGRYLPEYREVRERAGSFMNLCTSPELACEVTLQPLERYR 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLL-NPNIDLFLNYLLPIF 124
DAAILFSDIL + DA+G + FVE EGPR +PI +I+ L P+ + L Y+
Sbjct: 65 LDAAILFSDILTVPDAMGLGLEFVEGEGPRFRNPIRGAADIHRLGVPDPEAELAYVPA-- 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ +++++L + LIGF G+PWT+A+YM+ GG ++ + + Y+ + LL+ L
Sbjct: 123 -AVRLIKQRLGDRAPLIGFSGSPWTLATYMVEGGSSREFRKVKCLMYEEPALMHELLEKL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-AKFI 243
+D A YL AQI AGVD + +FDT G L + ++ R R+ +R I
Sbjct: 182 ADAVALYLNAQIAAGVDAVMVFDTWGGNLDTEHYLAFSLRYAERVRQQLRLTGRGRIPAI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG G L+ +A+GLDW+ + A + +QGNLDP+ L +++
Sbjct: 242 FFTKGGGQWLEAMAD-AGYDALGLDWTTDIGSARQRVGDRVALQGNLDPVALYARPEIIR 300
Query: 303 DGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL+ G G +FNLGHG+TP + P++V +++ V
Sbjct: 301 GEVRKILERYGRGSGHVFNLGHGVTPDIKPEHVGAMIEAVHEFS 344
>gi|312794898|ref|YP_004027820.1| Uroporphyrinogen decarboxylase [Burkholderia rhizoxinica HKI 454]
gi|312166673|emb|CBW73676.1| Uroporphyrinogen decarboxylase (EC 4.1.1.37) [Burkholderia
rhizoxinica HKI 454]
Length = 384
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 129/356 (36%), Positives = 188/356 (52%), Gaps = 16/356 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L+ PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 26 NLANDTFLRALRREPTEYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKQPDYATEVTLQ 85
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLN 118
P+ RY DAAILFSDIL I DA+G + F EGPR P+ T+ P ID L
Sbjct: 86 PLDRYVLDAAILFSDILTIPDAMGLGLEFTPGEGPRFAHPVRTEADVARLAVPGIDATLR 145
Query: 119 YLLPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
Y + +++ +R+ L + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 146 Y---VTDAVAQIRRALVGADGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYAR 202
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ + A+YL AQI AG + IFDT G L E +++++ + + ++++A+
Sbjct: 203 PDLMHRILEVNARAVADYLNAQIDAGAQAVMIFDTWGGVLAERIYQSFSLQYMSQVVAAL 262
Query: 234 RRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLD 290
+R++ I+F KG G L+ + +A+GLDW+V L+ A + +QGNLD
Sbjct: 263 KREHDGEPVPVIAFTKGGGQWLEAIAA-SGVDAVGLDWTVDLARARARVGGRVALQGNLD 321
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L +V+ +LD G+ P IFNLGHGI+ + V +LV V
Sbjct: 322 PNVLFAPPEVIRAQARQVLDAYGNHPGHIFNLGHGISQFTPVQAVTELVDEVHQYS 377
>gi|257453451|ref|ZP_05618746.1| uroporphyrinogen decarboxylase [Enhydrobacter aerosaccus SK60]
gi|257449203|gb|EEV24151.1| uroporphyrinogen decarboxylase [Enhydrobacter aerosaccus SK60]
Length = 369
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 20/362 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL ++ ++ P+W+MRQAGRYLPEY+Q R + +FL +C + E+T+QP
Sbjct: 9 KNDRILRAMRFESVDVTPVWMMRQAGRYLPEYKQTRAQAGDFLSLCKNTDLATEVTIQPF 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL I DALG + F EGP+ + + L +
Sbjct: 69 RRFELDAAILFSDILTIPDALGLGLYFEAGEGPKFHKTVRSMAEVEALPTVAMSDALDYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ +R L L GF G+PWT+A+YMI GG K++ + Y + LL
Sbjct: 129 MKAVTSIRHALAGRAPLFGFSGSPWTLATYMIEGGSSKEYRYAKAMLYGEPETLHALLAK 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D +YL+AQI AG ++QIFD+ G L +F ++ +I++A++ YP +
Sbjct: 189 ITDAVIDYLLAQIAAGAQLVQIFDSWGGALAHRQFVEFSHHYNTKIVAAIKATYPEVPVV 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL---------------ELQKEGPVQGN 288
F KG G L + ++A+GLDW++PL A + +QGN
Sbjct: 249 LFTKGGGLWLDTQCH-SGADALGLDWTMPLDRARSIVFEQQKALTKLHKKRHTGIALQGN 307
Query: 289 LDPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
LDP L + + + +L +I NLGHGI V+P + + V
Sbjct: 308 LDPATLFASPEHIRQQTHLMLQDAYSLGDKTGYIANLGHGINQWVNPDHAKAFIDAVHEY 367
Query: 345 KI 346
K+
Sbjct: 368 KL 369
>gi|117923343|ref|YP_863960.1| uroporphyrinogen decarboxylase [Magnetococcus sp. MC-1]
gi|166234253|sp|A0L3L1|DCUP_MAGSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117607099|gb|ABK42554.1| uroporphyrinogen decarboxylase [Magnetococcus sp. MC-1]
Length = 356
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 130/349 (37%), Positives = 194/349 (55%), Gaps = 6/349 (1%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ K + ++ ++ PIWLMRQAGRYLPEYR+ R + +F+ +C E E+T+QP
Sbjct: 2 KSKHRFIQACFRQPVDRTPIWLMRQAGRYLPEYRKTRAQAGDFMALCKNTELATEVTMQP 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY DAAILFSDILVI +A+G +VRF EGP +DP + + L
Sbjct: 62 IRRYGLDAAILFSDILVIPEAMGMDVRFATGEGPLLDPPVRVHGDIEKLIHTDPEDSLDY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L I LIGF G+PWT+A+YM+ GG K G + Y + + LLD
Sbjct: 122 VMRAVASIRKALNEEIPLIGFSGSPWTLATYMVEGGSSKTFGLVKGMLYDAPESMHLLLD 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY---PN 239
L+D+ A YL AQI G +QIFDT G L + F ++ RS+ ++ + R
Sbjct: 182 KLADMVAAYLNAQIRHGAQAVQIFDTWGGVLSQPTFREFSLRSMKAVVDRLDRTNSAGER 241
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I FAKG M+++ + + + +GLDW+ + E + + +QGN+DP L
Sbjct: 242 IPVILFAKGCNAMVEDIAQ-SGCDVVGLDWTSEIGPLRERIGHKVALQGNMDPALLYASP 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + G +L G P IFNLGHG+ P + P +V LV+ V+ E +
Sbjct: 301 ERIAQGAREVLQAFGPHPGHIFNLGHGMAPDMSPDHVEALVRAVKEEGL 349
>gi|126662830|ref|ZP_01733829.1| Uroporphyrinogen decarboxylase HemE [Flavobacteria bacterium BAL38]
gi|126626209|gb|EAZ96898.1| Uroporphyrinogen decarboxylase HemE [Flavobacteria bacterium BAL38]
Length = 341
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 119/346 (34%), Positives = 190/346 (54%), Gaps = 12/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLPE+R +R K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLRALKGETVERPPVWMMRQAGRYLPEFRALRDKY-DFFTRCETPELAAEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
R DAAILFSDILV+ A+G +V +N GP + +PI T E + PNI L Y
Sbjct: 62 RIVKPDAAILFSDILVVPRAMGIHVELKDNLGPIIPNPIRTAEQVNQVFVPNIHETLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ + ++ L + + LIGF G+PWT+ Y + G K + F + N A + L
Sbjct: 121 --VMDAVKLTKEMLNDEVPLIGFAGSPWTIFCYAVEGKGSKSFDTAKGFCFSNPVAAHLL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AG + IQIFD+ G L +++ ++ + + +I+ A+ +
Sbjct: 179 LQKITDTTILYLKEKVKAGCNAIQIFDSWGGMLSPVDYQEFSWQYINQIVEALAEETE-- 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L + + + ++A+G+DW+ A L + +QGN DP RL+
Sbjct: 237 -VIVFGKGCWFALNDMAK-SKASALGVDWTCSPRNARYLTGGDITLQGNFDPSRLLSPIP 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ ++D G +I NLGHGI P + + V+ V+ K
Sbjct: 295 TIKKMVHEMIDEFGKDKYIVNLGHGILPNIPVDHAKAFVEAVKEYK 340
>gi|187925859|ref|YP_001897501.1| uroporphyrinogen decarboxylase [Burkholderia phytofirmans PsJN]
gi|238058006|sp|B2T7J6|DCUP_BURPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187717053|gb|ACD18277.1| uroporphyrinogen decarboxylase [Burkholderia phytofirmans PsJN]
Length = 366
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 130/353 (36%), Positives = 187/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNATRGRAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYLL 121
RY DAAILFSDIL + DA+G + FV EGP+ P+ T++ P+ID L Y
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFVRPVRTEDDVARLAVPDIDATLRY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 125 -VTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + + +++S ++R
Sbjct: 184 MHRILDVNARSVAAYLNAQIEAGAQAVMIFDTWGGALADGVYQRFSLQYIQQVVSQLKRD 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L T +A+GLDW+V LS A E + + +QGN+DP
Sbjct: 244 HGGEKVPVITFTKGGGLWLDEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSV 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P+NV +LV V
Sbjct: 303 LFAPPASIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPENVAELVDEVHRHS 355
>gi|297539924|ref|YP_003675693.1| uroporphyrinogen decarboxylase [Methylotenera sp. 301]
gi|297259271|gb|ADI31116.1| uroporphyrinogen decarboxylase [Methylotenera sp. 301]
Length = 354
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 116/351 (33%), Positives = 189/351 (53%), Gaps = 8/351 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + L+ L + P+W+MRQAGRYLPEYR+ RK +FL +C +P++ E+T
Sbjct: 1 MSELKNDTFLKALMRQPTDYTPVWMMRQAGRYLPEYRESRKTAGSFLQLCKSPDFATEVT 60
Query: 60 LQPIRRYNF-DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
+QP+ RY DA+ILFSDIL + DA+G + F E EGP+ + +E + + +
Sbjct: 61 IQPLDRYPLLDASILFSDILTVPDAMGLGLYFEEGEGPKFERTLREEADIQKLEVP-DMA 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F +++ +RK L + LIGF G+PWT+A+YM+ G D + AY +
Sbjct: 120 KLQYVFDAVAQIRKTLDGRVPLIGFTGSPWTLATYMVEGKGGTDFLTIKKMAYARPDLLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + +YL AQI AG + IFD+ G L + ++ + +I++ + +
Sbjct: 180 HILETTAQTVIQYLNAQILAGAQAVMIFDSWGGALSHDAYIEFSLNYMKKIVAGLIKDND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+ F KG L+ + ++A+GLDW+V + A + + +QGNLDP L+
Sbjct: 240 GRKVPSVVFTKGGALWLEAQAEI-GADALGLDWTVDIGQARKRVGDKVALQGNLDPAILL 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L G+G +FNLGHGIT P+N +++ VR
Sbjct: 299 STPEAIEKQVENVLRSYGNGHGHVFNLGHGITQWTPPENAAAMLEAVRKHS 349
>gi|296444998|ref|ZP_06886959.1| uroporphyrinogen decarboxylase [Methylosinus trichosporium OB3b]
gi|296257419|gb|EFH04485.1| uroporphyrinogen decarboxylase [Methylosinus trichosporium OB3b]
Length = 344
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 152/345 (44%), Positives = 219/345 (63%), Gaps = 5/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++ ++ VL+G + PP+WLMRQAGR+LPEYR++R +FLD CY PE +TL
Sbjct: 1 MGE-EKPLIAVLRGEALPVPPVWLMRQAGRFLPEYRELRAHAGSFLDTCYNPEIAARITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNY 119
QPI R+ FDAAILFSDILV+ DALG+ V F GP+++PI +++ L P D +
Sbjct: 60 QPIERFGFDAAILFSDILVVPDALGQKVSFESGHGPKLEPIGEPKDLERLAPVFDA--DR 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P++++I+ ++++LP + IGFCGAPWTVASYMI+G D R+FAY++ AF
Sbjct: 118 LAPVYETIARVKRELPERVAFIGFCGAPWTVASYMIAGEGTPDQAPARLFAYRHPEAFGR 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L D S YL QI AGV+ +QIFD+ AG L EFE + + RII+ ++++ P
Sbjct: 178 LIDRLVDASIAYLTRQIDAGVEALQIFDSWAGVLPPQEFERWVVSPLQRIIAELKQRRPA 237
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I+F +GAG L + + ++A+GLD VP + A E+ +QGNLDP+ LV G
Sbjct: 238 VPIIAFVRGAGPHLPDLAQRLGADALGLDTFVPPQWAAREVSGGVALQGNLDPLALVAGG 297
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +AIL+ P IFNLGHG+ P+ +V LV +R+
Sbjct: 298 EALDRQTDAILEAFAGRPHIFNLGHGVLPETPLDHVARLVDRIRN 342
>gi|254439336|ref|ZP_05052830.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 307]
gi|198254782|gb|EDY79096.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 307]
Length = 349
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 151/344 (43%), Positives = 214/344 (62%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ +K IL L G V+ PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TL
Sbjct: 5 MSTQK-TILRALAGEVLATPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTL 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+ILF+DIL++ ALG N+ FV EGPR+ +TT + + + L
Sbjct: 64 QPIRRYGFDASILFADILLLPQALGANLWFVTGEGPRLSTVTTADELKALKPVSAIHDTL 123
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP+ +TLIGF GAPWTVA+YMI+G D G + F L
Sbjct: 124 SPIYETVKILTRELPDDVTLIGFAGAPWTVATYMIAGQGTPDQGPAHALKDTDKAVFEGL 183
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D + EYL AQI AG +V+++FD+ AG L F NYA + + RI++A+++++P+
Sbjct: 184 LDLITDGTIEYLSAQIDAGAEVVKLFDSWAGSLMGDNFINYAIKPMARIVAALKQRHPDT 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F +GA ++ I LD V +A +Q +G VQGNL +V G
Sbjct: 244 PIIAFPRGADERYIGLHDAIGADCIALDDGVTAHWAAANVQTDGCVQGNLKSSHMVTGGD 303
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ AI+D L GP IFNLGHGITP +P+NV ++ TVR
Sbjct: 304 ALVTETRAIVDALKGGPHIFNLGHGITPDANPENVQLMIDTVRE 347
>gi|253997672|ref|YP_003049736.1| uroporphyrinogen decarboxylase [Methylotenera mobilis JLW8]
gi|253984351|gb|ACT49209.1| uroporphyrinogen decarboxylase [Methylotenera mobilis JLW8]
Length = 354
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 120/352 (34%), Positives = 191/352 (54%), Gaps = 8/352 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ + L+ L + P+W+MRQAGRYLPEYR+ RK +FL +C ++ ++T
Sbjct: 1 MNQLKNDTFLKALMRQPTDYTPVWMMRQAGRYLPEYRESRKTAGSFLQLCKNAQFATDVT 60
Query: 60 LQPIRRYNF-DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL + DA+G + F E EGP+ + QE + + +
Sbjct: 61 LQPLDRYPLLDAAILFSDILTVPDAMGLGLYFEEGEGPKFERTLQQEAD-IQKLVVPDMA 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F ++ +RK L + LIGF G+PWT+A+YM+ G D + AY +
Sbjct: 120 KLQYVFDAVRSIRKALDGRVPLIGFSGSPWTLATYMVEGKGGTDFLNTKKMAYARPELLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + +YL AQI AG + IFD+ G L + ++ ++ + +I++ + +
Sbjct: 180 HILETTAQTVIQYLNAQIMAGAQAVMIFDSWGGALAHNAYKEFSLNYMQKIVNGLIKTND 239
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ + S+A+GLDW+V + A + + +QGNLDP L+
Sbjct: 240 GRTVPSIVFTKGGGLWLEAQAEI-GSDALGLDWTVDIGSARQRVGDKVALQGNLDPAILL 298
Query: 296 VGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V A+L G+G +FNLGHGIT P+N ++ +R+ +
Sbjct: 299 STPEAIEREVAAVLASYGNGHGHVFNLGHGITQWTPPENAAAMLSAIRAHSL 350
>gi|256425454|ref|YP_003126107.1| uroporphyrinogen decarboxylase [Chitinophaga pinensis DSM 2588]
gi|256040362|gb|ACU63906.1| uroporphyrinogen decarboxylase [Chitinophaga pinensis DSM 2588]
Length = 341
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 188/347 (54%), Gaps = 9/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + +L L+G P+W+MRQAGRYLP+Y ++R+K+ +F + C PE E+T
Sbjct: 1 MSALKNDLLLRALRGETTERVPVWMMRQAGRYLPDYIKLREKY-SFFERCMNPELATEIT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+ P+ + DAAI+FSDILV+ A+G V+ +E GP + DP+ D+ +
Sbjct: 60 VMPVHQVGVDAAIIFSDILVVPQAMGMEVQLIEKIGPVLPDPVKGAADLQKLCVPDVK-D 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F+++++ +K L + LIGF GAPWT+ YM+ G K + F YQ +
Sbjct: 119 TLNYVFEALALTKKTLDGAVPLIGFAGAPWTLLCYMVQGKGSKTFDAAKAFCYQQPEVAH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++D + YL Q+ AG D +Q+FD+ G L +FEN++ + + +I++A++
Sbjct: 179 QLLQMITDTTIAYLKEQVKAGADCLQLFDSWGGLLSPQDFENFSLQYMRQIVAALKDVC- 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
FAKGA + L+ T +N +G+DW++ + A + +QGN DP +L+
Sbjct: 238 --PVTVFAKGAWFALEEMAA-TGANCLGVDWAIQPARARQFAGNNVTLQGNFDPAKLLAP 294
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V +L G +I NLGHGI P V + + TV+
Sbjct: 295 IPEIKKSVKEMLTGFGKHRYIANLGHGILPNVPVDHARAFIDTVKEF 341
>gi|33594189|ref|NP_881833.1| uroporphyrinogen decarboxylase [Bordetella pertussis Tohama I]
gi|45476873|sp|Q7VU41|DCUP_BORPE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33564264|emb|CAE43556.1| uroporphyrinogen decarboxylase [Bordetella pertussis Tohama I]
gi|332383603|gb|AEE68450.1| uroporphyrinogen decarboxylase [Bordetella pertussis CS]
Length = 358
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEY R + +F+ + P+Y E+TLQP+
Sbjct: 7 KNDVFLRALLREPVPYTPIWLMRQAGRYLPEYNATRARAGSFMGLAQNPDYACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + A+G + F EGPR P+ + D ++ L
Sbjct: 67 ARYPLDAAILFSDILTVPHAMGLGLDFAPGEGPRFAHPVRDESDVAKLAVPD--MDSLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++ +R++L + LIGF G+PWT+A YM G D+ + Y + +L+
Sbjct: 125 VFDAVRTIRRELDGRVPLIGFAGSPWTIACYMAEGRGSDDYRLIKSMLYGRPDLLHRILE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + YL AQI AG + +FD+ G L + F+ ++ R++ + R+
Sbjct: 185 INAEATRHYLNAQIDAGAQAVMLFDSWGGVLADGLFQQFSLAYTRRVVEGLTREREGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQ 299
I F KG G L+ +A+GLDW+V L A + +QGNLDPM L G Q
Sbjct: 245 PVIVFTKGGGQWLEEIAA-CGCDAVGLDWTVNLGAARRRVTDAVALQGNLDPMTLFGGAQ 303
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ LD G G +FNLGHGI+ P+ V +LV V +
Sbjct: 304 AVRAEARRTLDAFGPVGKGGHVFNLGHGISQYSPPEVVSELVDEVHTYS 352
>gi|326335018|ref|ZP_08201218.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692823|gb|EGD34762.1| uroporphyrinogen decarboxylase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 341
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+G + PP+W+MRQAGRYLP++R +R K+ +F C TPE E+T QP+
Sbjct: 3 KNDLFLRALKGEITERPPVWMMRQAGRYLPQFRALRDKY-DFFTRCRTPELVAEITTQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDILV+ A+G + E GP + PI + + D+ + L
Sbjct: 62 EIVGVDAAILFSDILVVPQAMGIEIEMKEQVGPFLPSPIRSAKDIEKVQIPDISHS-LGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q I + +++L + + LIGF GAPWT+ Y++ G K + F + N + + LL
Sbjct: 121 VLQGIHLTKERLMDEVPLIGFAGAPWTIFCYIVEGKGSKTFDIAKSFCFSNPKLAHSLLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+++ + YL ++ AG D +Q+FD+ G L ++++++ + +I+ A+
Sbjct: 181 KITNTTILYLKEKVKAGADALQLFDSWGGVLSPEDYQDFSWQYTLQILEALSP----TPT 236
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I FAKG + L+ + ++A+G+DW+ A L + +QGNLDP L+ + +
Sbjct: 237 IIFAKGCWFALEQMSKSC-ASALGVDWTCNPQIARRLTGGKKVLQGNLDPAWLLASPEQI 295
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ G +I NLGHGI P V +N V+ V+ K
Sbjct: 296 RQKTHRMIQAFGKDHYIANLGHGILPNVPVENARAFVEAVKCFK 339
>gi|254486713|ref|ZP_05099918.1| uroporphyrinogen decarboxylase [Roseobacter sp. GAI101]
gi|214043582|gb|EEB84220.1| uroporphyrinogen decarboxylase [Roseobacter sp. GAI101]
Length = 349
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 148/339 (43%), Positives = 201/339 (59%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY P+ E+TLQPIRR
Sbjct: 9 KTILRALAGETLATPPIWMMRQAGRYLPEYKATRAEAGDFLSLCYNPDLATEVTLQPIRR 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQ + +D L PI+Q
Sbjct: 69 YGFDAAILFADILLVPQALGADLWFVTGEGPRLSTVTTQADFDKLKPVDAIHETLNPIYQ 128
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ L LP TLIGF GAPWTVA+YMI+G KD G ++ F LL+ ++
Sbjct: 129 TVRNLGGALPPETTLIGFAGAPWTVATYMIAGQGTKDQGPAHQLRINDNPLFESLLNLIT 188
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EY+ AQI AG +V++IFD+ AG L F+ YA I +++++P I F
Sbjct: 189 KATIEYMSAQIDAGAEVMKIFDSWAGSLSGEAFQKYALEPAREITQELKKRHPGIPIIGF 248
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + R T + + LD SV +A +Q +G VQGNL +V G Q ++D
Sbjct: 249 PREAGDQYIGFHRATGVDCVALDNSVSAEWAAANVQVDGCVQGNLASRHMVTGGQDLVDE 308
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 309 TRAIVKAFSKGPHIFNLGHGITPDADPDNVQLMIDTVRE 347
>gi|83594945|ref|YP_428697.1| uroporphyrinogen decarboxylase [Rhodospirillum rubrum ATCC 11170]
gi|123739389|sp|Q2RN85|DCUP_RHORT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83577859|gb|ABC24410.1| uroporphyrinogen decarboxylase [Rhodospirillum rubrum ATCC 11170]
Length = 348
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 163/343 (47%), Positives = 219/343 (63%), Gaps = 2/343 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++ ++ L+ L G ++PPP+WLMRQAGRYLPEYR R++ FLD+CYTP+ VE+TLQ
Sbjct: 5 SKTQKPFLQALAGETLSPPPVWLMRQAGRYLPEYRATREEAGGFLDLCYTPKLAVEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+RRY FDAAILFSDILV+ +A+GR V F + EGP +DP+T++ L
Sbjct: 65 PLRRYAFDAAILFSDILVVPNAIGRQVAFKQGEGPVLDPLTSRADVEAL-EPGKLRERLG 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+F+++ L +P+ LIGF GAPWTVA+YM+ GG KD + + Y F L+
Sbjct: 124 PVFETVRGLASAIPSTTALIGFAGAPWTVATYMLEGGSSKDFSVAKSWIYSRPDDFAALM 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L + +YLIAQI AG + IQIFDT AG L E EF + +GRI A+ + P
Sbjct: 184 EVLISATTDYLIAQIDAGAEAIQIFDTWAGVLPETEFHRWVIEPIGRITRALHEQRPGVP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F KGAG + + + R T + +GLD SVPL++A + LQ VQGN+DP+ LV G +
Sbjct: 244 VIGFPKGAGVLYETFIRETGVDGVGLDASVPLAWAAKTLQPLCTVQGNMDPLLLVEGGPL 303
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
M V +LD LG GPFIFNLGHGI PQ P+NV L+ VR+
Sbjct: 304 MEQAVKRLLDTLGHGPFIFNLGHGIVPQTPPENVARLIDLVRA 346
>gi|89069762|ref|ZP_01157098.1| uroporphyrinogen decarboxylase [Oceanicola granulosus HTCC2516]
gi|89044708|gb|EAR50819.1| uroporphyrinogen decarboxylase [Oceanicola granulosus HTCC2516]
Length = 342
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 138/340 (40%), Positives = 200/340 (58%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L L G + PPIWLMRQAGRYLPEYR R + +FL +CY PE E+TLQPIR
Sbjct: 3 NKLLLRALAGETLPTPPIWLMRQAGRYLPEYRATRAQAGDFLSLCYNPELAAEVTLQPIR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILF+DIL++ ALG ++ FV EGPR+ +T + D + L P++
Sbjct: 63 RFGFDAAILFADILLVPQALGLDLWFVTGEGPRLSTVTGPDDLARLRGPDDIHDRLAPVY 122
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ L + LP + LIGF GAPWTVA+YMI+G D G + F+ L++ +
Sbjct: 123 ETVRRLTESLPREVALIGFAGAPWTVATYMIAGRGTPDQGPAHALKSTDRATFDALMERI 182
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL AQ+ AG + +++FD+ AG L +FE YA RI++A++ ++P I+
Sbjct: 183 TLATIEYLSAQVEAGAECVKLFDSWAGSLEGDDFETYAVAPAARIVAALKARHPGLPVIA 242
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GA + + +D V +A E +Q G VQGNL P +V G +++
Sbjct: 243 FPRGADSRYVGLHERIGAECMAIDNGVSARWAAEHVQPGGCVQGNLAPTHMVTGGAALVE 302
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI++ GP +FNLGHGITP DP NV L++ VR
Sbjct: 303 ETRAIVEAFSRGPHVFNLGHGITPDADPDNVHRLIEAVRG 342
>gi|198283012|ref|YP_002219333.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667464|ref|YP_002425216.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247533|gb|ACH83126.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519677|gb|ACK80263.1| uroporphyrinogen decarboxylase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 354
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 185/349 (53%), Gaps = 7/349 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L ++ P+WLMRQAGRYLPEYR R + +FL +C TPE E+TLQ
Sbjct: 4 TLQNDNFLRACLRQPVDHVPVWLMRQAGRYLPEYRATRARAGDFLSLCTTPELACEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
PI R+ DAAILFSDIL I +G + F E EGP P+ + D L
Sbjct: 64 PIDRFPLDAAILFSDILTIPYVMGLGLEFQEGEGPVFARPLRSAADISALSQPDPETE-L 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++R+++ + LIGF G+PWT+A YMI G +D + Y + + L
Sbjct: 123 RFVMDAVRLIRREIDGRVPLIGFAGSPWTLACYMIEGRGSRDFIHIKGLLYSDPALLHRL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ YL AQI AG + IFDT G L + ++ + I++A++R+ +
Sbjct: 183 LRHLAQSVTSYLNAQIAAGAQAVMIFDTWGGSLSTPAYAEFSLAYMSEIVAALQREAEDR 242
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I F KG G L+ + ++A+GLDW+ L A L +QGN+DP+ L
Sbjct: 243 RVPVILFTKGGGNWLEAMAA-SGADALGLDWTTELGHARQRLGNSVALQGNMDPIALYGS 301
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ IL+ GSG IFNLGHGITPQ ++V LV++V+S +
Sbjct: 302 PEGIVREATRILESHGSGTGHIFNLGHGITPQTPVEHVAILVESVQSWR 350
>gi|152980188|ref|YP_001355297.1| uroporphyrinogen decarboxylase [Janthinobacterium sp. Marseille]
gi|179308113|sp|A6T450|DCUP_JANMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151280265|gb|ABR88675.1| uroporphyrinogen decarboxylase [Janthinobacterium sp. Marseille]
Length = 360
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 180/350 (51%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L P+WLMRQAGRYLPEYR R + +FL + P++ E+TLQP+
Sbjct: 9 QNDTFLRALLRQPTEYTPLWLMRQAGRYLPEYRATRARAGSFLGLAKNPDFATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F+E EGP+ + P+ ++ + L L
Sbjct: 69 DRYKLDAAILFSDILTVPDAMGLGLYFIEGEGPKFERPLRDEKAVQALKVPE--LGSLQY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +R +L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 127 VFDAVTQIRTELKGRVPLIGFTGSPWTLACYMVEGGGSDDFRTVKAMLYNRPDLMHHILQ 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ A YL AQI AG + +FDT G L + ++ ++ + ++ V+ + +
Sbjct: 187 TNALTVAAYLNAQIDAGAQAVMMFDTWGGALADGAYQQFSLHYMREVMKHVKTEKDGVRI 246
Query: 243 --ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G LK + ++A+GLDW+V L A ++ + +QGNLDP L
Sbjct: 247 PSIVFTKGGGLWLKEIAAV-GADAVGLDWTVNLGAARAKVGERVALQGNLDPSILFAQPD 305
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ G +FNLGHGI+ P+ V LV V
Sbjct: 306 QIRAEVAKVLESFGKHSAGSGHVFNLGHGISQFTPPEAVTVLVDAVHELS 355
>gi|150024155|ref|YP_001294981.1| uroporphyrinogen decarboxylase [Flavobacterium psychrophilum
JIP02/86]
gi|166234249|sp|A6GVN8|DCUP_FLAPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|149770696|emb|CAL42160.1| Uroporphyrinogen decarboxylase [Flavobacterium psychrophilum
JIP02/86]
Length = 341
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 188/345 (54%), Gaps = 12/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGRYLPE+ +R K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLKALKGETVQRPPVWMMRQAGRYLPEFIALRDKY-DFFTRCQTPELAAEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLNYL 120
RR DAAILFSDILV+ A+G V EN GP + +PI T + + P++ L Y
Sbjct: 62 RRIAPDAAILFSDILVVPQAMGIEVLMKENVGPFLPNPIRTIQDVERVIVPDVHQTLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F +I + ++ L + + LIGF G+PWT+ Y + G K + + F + + A + L
Sbjct: 121 --VFDAIKLTKQMLNDEVPLIGFAGSPWTIMCYAVEGQGSKSFDKAKGFCFSHPEAAHVL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AG + IQIFD+ G L +++ ++ + + +II A+
Sbjct: 179 LQKITDTTIAYLTEKVKAGCNAIQIFDSWGGMLSPVDYQEFSWKYINQIIEALADI---T 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L + + ++A+G+DW+ A L +QGN DP RL+
Sbjct: 236 PVIVFGKGCWFALGEMGK-SKASALGVDWTCSPRHARYLSGGNITLQGNFDPSRLLSPIP 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ V+ ++D G +I NLGHGI P + + V V+
Sbjct: 295 VIKKMVHEMIDEFGKDKYIVNLGHGILPNIPVDHAKAFVDAVKEY 339
>gi|83648604|ref|YP_437039.1| uroporphyrinogen decarboxylase [Hahella chejuensis KCTC 2396]
gi|123530779|sp|Q2S9R0|DCUP_HAHCH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83636647|gb|ABC32614.1| uroporphyrinogen decarboxylase [Hahella chejuensis KCTC 2396]
Length = 356
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 130/350 (37%), Positives = 192/350 (54%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+E + + L L ++ P+W+MRQAGRYLPEYR R + +F+D+C E+ E+T
Sbjct: 1 MSELKNDRFLRALMRQPVDVTPVWMMRQAGRYLPEYRASRARAGSFMDLCKNAEFACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R+ DAAILFSDIL I DA+G + F EGPR E + ++
Sbjct: 61 LQPLERFELDAAILFSDILTIPDAMGLGLYFETGEGPRFKKTVRTEADVNALHMPDADTD 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + AY +
Sbjct: 121 LGYVMNAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFREIKKLAYGQPELLHL 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D A+YL AQI AG +QIFDT G L + ++ + +I+S ++R+
Sbjct: 181 LLDKLADSVADYLNAQIRAGAQAVQIFDTWGGALTAAGYLEFSLAYMKKIVSKLQREADG 240
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F K G L++ ++A+GLDW+ +S A + +QGN+DP L
Sbjct: 241 RPVPVILFTKNGGQWLEHIAD-AGADALGLDWTTEISEARRRVGDRVSLQGNMDPAALYA 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V+ IL GSG +FNLGHGITP VDP++ + V
Sbjct: 300 PPAAIRDQVSRILASFGSGSGHVFNLGHGITPDVDPEHAKVFIDAVHELS 349
>gi|115523333|ref|YP_780244.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisA53]
gi|122297168|sp|Q07S20|DCUP_RHOP5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|115517280|gb|ABJ05264.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisA53]
Length = 348
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 159/346 (45%), Positives = 220/346 (63%), Gaps = 4/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + LEVL GN PP+W+MRQAGRYLPEYR++R K FLD+C+ E+ E+TLQ
Sbjct: 4 NLVTKPFLEVLSGNRQASPPMWMMRQAGRYLPEYREVRAKAGGFLDLCFNAEFAAEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYL 120
PIRR+ FDAAI+FSDILV+ ALGR+VRF EGPR+DP+ + + + L ID L+ L
Sbjct: 64 PIRRFGFDAAIIFSDILVVPYALGRSVRFEVGEGPRLDPLDSPDKVSTLTKAID--LSKL 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F ++ I R++LP TLIGFCG+P+TVA+YM++G D R AYQ+ AF +
Sbjct: 122 QAVFDALRITRRELPPETTLIGFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKI 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + S +YL+AQ+ AG +V+QIFDT AG L EFE ++ RI+ VR+ P
Sbjct: 182 IDVLVESSIQYLLAQLEAGAEVLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
K I F +GAG ML + T + + +DW+ SF E +Q + VQGNLDP+ L+ G
Sbjct: 242 KIIGFPRGAGAMLPAFVERTGVDGVSIDWTAEPSFVREKVQSKVVVQGNLDPLVLIAGGA 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+ +L G IFNLGHGI P+ +V ++K VR+ K
Sbjct: 302 ALDEAVDDVLKNFSGGRHIFNLGHGIQPETPIAHVEQMLKRVRAFK 347
>gi|260426787|ref|ZP_05780766.1| uroporphyrinogen decarboxylase [Citreicella sp. SE45]
gi|260421279|gb|EEX14530.1| uroporphyrinogen decarboxylase [Citreicella sp. SE45]
Length = 347
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 141/339 (41%), Positives = 204/339 (60%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ IL L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRR
Sbjct: 3 KTILRALAGETLPTPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ ITT+ + ++ + L PI++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTEAGFDKLGRGEMIHDTLNPIYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILR +LP+ TLIGF GAPWTVA+YMI+G D G +N F +++ L+
Sbjct: 123 TVKILRSELPSETTLIGFAGAPWTVATYMIAGRGTPDQGPAHTLKAENRALFEKIIERLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL AQ+ AG +V+++FD+ AG L +F+ YA I ++ ++P I F
Sbjct: 183 ESTIDYLSAQVEAGAEVVKLFDSWAGSLDGEDFQRYALEPARIITRELKARHPGLPVIVF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL +V G ++
Sbjct: 243 PRQAGEGYVGFHEATGADCVAVDDSVTPEWAAEHVQVSGCVQGNLASSHMVTGGDALVAE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 303 TRRVVRAFSKGPHIFNLGHGITPDADPENVQLMIDTVRE 341
>gi|222087932|ref|YP_002546470.1| uroporphyrinogen decarboxylase [Agrobacterium radiobacter K84]
gi|221725380|gb|ACM28536.1| uroporphyrinogen decarboxylase [Agrobacterium radiobacter K84]
Length = 320
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 189/321 (58%), Positives = 238/321 (74%), Gaps = 2/321 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CY+PE+ VE+T+QPIRRY FDAAI+FSDILVI D L
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYSPEHAVEVTMQPIRRYGFDAAIMFSDILVIPDGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVR+ E GP+MDPI I+ L + + YL P+ +++ LR +LP TL+GFC
Sbjct: 61 NRNVRYTEGHGPQMDPIDEAGIFALK--AEGVVEYLAPVMETLRRLRAELPEETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+F Y++ +A LL L+D+SA YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFGYRHPKALEHLLMLLADISAAYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EFE +A + V RII++V+ + P A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFEAFAVKPVARIIASVKAQRPEARIIAFAKGAGYQLKTYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQ+EGPVQGNLDPMR+V G + + DG++ IL LG GP IFNLGHG
Sbjct: 239 IGLDWSVPLAFARELQREGPVQGNLDPMRVVAGGKALEDGIDEILQQLGHGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEK 345
ITPQ DP NV LV+ VR K
Sbjct: 299 ITPQADPANVTALVQRVRGWK 319
>gi|297278556|ref|XP_002808261.1| PREDICTED: LOW QUALITY PROTEIN: uroporphyrinogen decarboxylase-like
[Macaca mulatta]
Length = 367
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 184/349 (52%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPAVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQGQRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D L Q +G++ +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALXXXLXGQAVSGIEALQLFESHAGHLGPQLFNKFALPYIRDVAKRVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELSQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 313 SEEEIGQLVKQMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361
>gi|225012135|ref|ZP_03702572.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-2A]
gi|225003690|gb|EEG41663.1| uroporphyrinogen decarboxylase [Flavobacteria bacterium MS024-2A]
Length = 341
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 184/345 (53%), Gaps = 12/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L G +N PP+W+MRQAGRYLP++ +++ K+ F C TPE E+T+ PI
Sbjct: 3 KNDLFLKALNGETVNRPPVWMMRQAGRYLPDFMKLKAKY-EFFTRCQTPELATEITIMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY--LLNPNIDLFLNYL 120
+ DAAILFSDILV+ A+ V + GP + +PI + E ++ P+I L Y
Sbjct: 62 DQIGPDAAILFSDILVVLQAMQIPVEMKDGIGPWIPNPIRSSEQVSQVIVPDIHEHLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ + ++ L + + LIGF G+PWT+ Y + G K+ + F + A + L
Sbjct: 121 --VLDAVKMTKQALNDRVPLIGFAGSPWTLLCYAVQGQGSKNFDIAKGFCFSQPEAAHAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGV +Q+FD+ G L ++ ++ + +II A++ +
Sbjct: 179 LQKITDTTIAYLKEKVKAGVHAVQVFDSWGGLLSPDDYSIFSWPYIQQIIDALKE---DI 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L R + ++A+G+DW+ A L + +QGN DP RL+
Sbjct: 236 PVIVFGKGCWFALNEMGR-SGASALGVDWTCTARNARYLSGGQITLQGNFDPSRLLSPIP 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ GV+ +++ G +I NLGHGI P + + V V+
Sbjct: 295 EIKAGVHKMINEFGKDKYIVNLGHGILPNIPVDHAKAFVDAVKEY 339
>gi|330815051|ref|YP_004358756.1| Uroporphyrinogen decarboxylase [Burkholderia gladioli BSR3]
gi|327367444|gb|AEA58800.1| Uroporphyrinogen decarboxylase [Burkholderia gladioli BSR3]
Length = 375
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 128/354 (36%), Positives = 183/354 (51%), Gaps = 12/354 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L+ + PIWLMRQAGRYLPEY R + +FL + P+Y E+TLQ
Sbjct: 15 NLLNDTFLRALRREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKNPDYATEVTLQ 74
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ RY DAAILFSDIL I DA+G + F EGP+ P+ T+ D+ L
Sbjct: 75 PLERYPLDAAILFSDILTIPDAMGLGLEFQAGEGPKFASPVRTEADVARLAVPDIGAT-L 133
Query: 121 LPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 134 GYVTDAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPD 193
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+LD D A YL AQI AG + IFDT G L + ++ + + R+++ ++R
Sbjct: 194 LMQRILDVNVDAVAAYLNAQIEAGAQAVMIFDTWGGTLADGAYQRLSLDPIRRVVAKLKR 253
Query: 236 KYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
++ I+F KG G L+ + +A+GLDW+V L A E + +QGNLDP
Sbjct: 254 QHDGEQVPVITFTKGGGLWLEEIAA-SGVDAVGLDWTVNLGRARERVNGAVALQGNLDPN 312
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 313 ILFAPPATIRMEARAVLDSYGNHPGHVFNLGHGISQFTPPESVAELVDEVHRHS 366
>gi|309780439|ref|ZP_07675189.1| uroporphyrinogen decarboxylase [Ralstonia sp. 5_7_47FAA]
gi|308920832|gb|EFP66479.1| uroporphyrinogen decarboxylase [Ralstonia sp. 5_7_47FAA]
Length = 367
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 182/353 (51%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D ++ L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD--MSSLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F +++ +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG +Q+FDT G L + ++ ++ + R+++ +R
Sbjct: 185 ILEINAQAVIDYLNAQIDAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVNGIRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+G+DW+V L A + +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLEAMAE-TGADALGVDWTVNLQLARQRTAGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 304 EPEAIRAQVRRVLEDYAARGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHSFS 356
>gi|172044616|sp|Q0K5N1|DCUP_RALEH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 363
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 126/354 (35%), Positives = 181/354 (51%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 5 QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D + L
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVQKLAVPD--MASLQY 122
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 123 VFDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMH 182
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + EYL AQI AG + IFDT G L + ++ ++ + R+++ ++R++
Sbjct: 183 RILEINAQAVTEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHD 242
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
I F KG G L+ T ++AIGLDW+V L+ A +QGN+DP L
Sbjct: 243 GQQVPAIVFTKGGGLWLEALAD-TGADAIGLDWTVNLAEARRRTGGRVALQGNIDPTVLF 301
Query: 296 VGNQVMIDGVNAILD----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD GS +FNLGHGI+ P NV LV V
Sbjct: 302 APEAAIREQVRGVLDSYAAAGGSDGHVFNLGHGISQFTPPDNVSVLVDEVHRHS 355
>gi|113869569|ref|YP_728058.1| uroporphyrinogen decarboxylase [Ralstonia eutropha H16]
gi|113528345|emb|CAJ94690.1| uroporphyrinogen decarboxylase [Ralstonia eutropha H16]
Length = 365
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 126/354 (35%), Positives = 181/354 (51%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 7 QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D + L
Sbjct: 67 DRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVQKLAVPD--MASLQY 124
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 VFDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMH 184
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + EYL AQI AG + IFDT G L + ++ ++ + R+++ ++R++
Sbjct: 185 RILEINAQAVTEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHD 244
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
I F KG G L+ T ++AIGLDW+V L+ A +QGN+DP L
Sbjct: 245 GQQVPAIVFTKGGGLWLEALAD-TGADAIGLDWTVNLAEARRRTGGRVALQGNIDPTVLF 303
Query: 296 VGNQVMIDGVNAILD----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD GS +FNLGHGI+ P NV LV V
Sbjct: 304 APEAAIREQVRGVLDSYAAAGGSDGHVFNLGHGISQFTPPDNVSVLVDEVHRHS 357
>gi|126305804|ref|XP_001375996.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Monodelphis
domestica]
Length = 388
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 178/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYL E+++ R ++F C +PE ELTLQP+
Sbjct: 36 QNDTFLRAAWGEATDYTPVWCMRQAGRYLKEFQETRAG-QDFFITCRSPETCCELTLQPL 94
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ A+G V V +GP P+ ++ L
Sbjct: 95 RRFPLDAAIIFSDILVVPQAMGMQVAMVPGKGPSFPSPLREEQDLDRLQAPVDVDKELGY 154
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R +L + LIGF GAPWT+ SYM+ GG Q + + YQ A + LL
Sbjct: 155 VFQAITLTRHQLAGRVPLIGFAGAPWTLMSYMVEGGGSNTMAQAKRWLYQWPEASHRLLG 214
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKY 237
L+DV YL+ Q+ AG +Q+F++HAG LG F YA + + V+
Sbjct: 215 LLTDVLVPYLVGQVAAGAQALQLFESHAGHLGPELFSEYALPYIRDVAKRVKVGLREAGL 274
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK A Y L+ + + +G+DW V + A E + K +QGNLDP L
Sbjct: 275 EPVPLIIFAKDAHYALEALAQ-SGYEVVGIDWKVNPALARERVGKTVTLQGNLDPCALYA 333
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L G I NLGHG+ P +DP +V V+ V
Sbjct: 334 SKEKIGRVVEQMLAAFGPQRHIANLGHGLYPDMDPAHVEAFVEAVHRHS 382
>gi|152993199|ref|YP_001358920.1| uroporphyrinogen decarboxylase [Sulfurovum sp. NBC37-1]
gi|172048742|sp|A6QAQ4|DCUP_SULNB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151425060|dbj|BAF72563.1| uroporphyrinogen decarboxylase [Sulfurovum sp. NBC37-1]
Length = 346
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 121/337 (35%), Positives = 187/337 (55%), Gaps = 3/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++R + NFL++C+ PE E+TLQP+
Sbjct: 5 FVDACLGKETPYTPVWMMRQAGRYLPEYMKVRAEAGNFLNLCHDPEKACEVTLQPVDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI D +G ++ FV+ EGP+ DPI TQ + L ++ +
Sbjct: 65 VDAAILFSDILVIPDEMGMDLSFVKGEGPKFSDPIKTQADVDRLIGGEEAAGKLTYVYDT 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +++++L LIGF GAPWT+A+YMI G K + + Y + + +L +++
Sbjct: 125 IKLIKERLAEDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSDPELLHNILAKVTE 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y+ QI AG+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F
Sbjct: 185 VVKYYMEKQIEAGIDVVQIFDSWASAIEPGKYDEFSWKYMVEIADYLKSKYPDTPIIMFP 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG ++ + + G+DW P++ A E L + +QGN++P RL + + V
Sbjct: 245 KGIPAFIERGLVYGNFDVFGVDWGTPMALAKEKLGDQYVLQGNMEPCRLY-SKEATTECV 303
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
AI V+G IFNLGHGI P V +N V
Sbjct: 304 EAIQKVMGGKRHIFNLGHGILPDVPVENAKHFVNECH 340
>gi|78221244|ref|YP_382991.1| uroporphyrinogen decarboxylase [Geobacter metallireducens GS-15]
gi|123742953|sp|Q39ZQ8|DCUP_GEOMG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78192499|gb|ABB30266.1| Uroporphyrinogen decarboxylase HemE [Geobacter metallireducens
GS-15]
Length = 340
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 130/340 (38%), Positives = 181/340 (53%), Gaps = 8/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLPEY +R K FL++C TPE E+TLQP+
Sbjct: 2 NNRFLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSKC-TFLELCKTPELAAEVTLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL + +G + FV GP + + I + +
Sbjct: 61 ILGVDAAILFSDILTPVEPMGLKLDFVP--GPVFETPVRTMADVERLRIPNPEEDVPYVL 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I ILRK+L + LIGF GAP+T+A YM+ G KD + Y + L+D +
Sbjct: 119 DTIKILRKELAGRVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMDKV 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL AQI AG IQIFDT G L ++E + ++I+ + R+ N I
Sbjct: 179 TMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKFVLPYTRKLINGLNRQ--NTPVIH 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ ++ + +GLDW V L A ++ VQGNLDP L +V+
Sbjct: 237 FVKGAGTMLETVQKAGG-DVMGLDWHVNLGKARDVLGPNMAVQGNLDPTVLYAPKEVIEV 295
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+N + +V+ V
Sbjct: 296 EVKRVLDENAGRPGHIFNLGHGILPTVPPENAIHMVECVH 335
>gi|83815293|ref|YP_445821.1| uroporphyrinogen decarboxylase [Salinibacter ruber DSM 13855]
gi|294507723|ref|YP_003571781.1| Uroporphyrinogen decarboxylase [Salinibacter ruber M8]
gi|123528620|sp|Q2S1W0|DCUP_SALRD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|83756687|gb|ABC44800.1| uroporphyrinogen decarboxylase [Salinibacter ruber DSM 13855]
gi|294344051|emb|CBH24829.1| Uroporphyrinogen decarboxylase [Salinibacter ruber M8]
Length = 354
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 119/342 (34%), Positives = 182/342 (53%), Gaps = 3/342 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L +G + P+W+MRQAGRYLPEY+ IRK+ +F ++ TPE E+T+QP+
Sbjct: 9 NDRLLRTARGEPTDCTPVWMMRQAGRYLPEYQAIRKE-HSFFEVVETPELAAEVTIQPVE 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++ DAAILF DI+V+ +A+G V+ V +GP T + + L +F
Sbjct: 68 RFSLDAAILFCDIMVVPEAMGLTVKMVSGQGPTFPKPLTTPDEMERLVEPDVESALGHVF 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++++ R +L + LIGF GAPWT+ +YM+ GG K + R + Y++ A LL
Sbjct: 128 EALTVTRHELAGRVPLIGFSGAPWTLMAYMVEGGGSKSYRAARRWLYRHPDASKALLQRT 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DV EYLI Q+ AG ++Q+FD+ AG F + + I + V+ +P+ +
Sbjct: 188 TDVIVEYLIRQVDAGAQMLQVFDSWAGLHTPENFRTFCLPYLAEIATRVKAAHPDVPLVI 247
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
FAKGA Y L TD + I LD ++ A + + +QGNLDP L V+
Sbjct: 248 FAKGAHYALDALAD-TDYDVISLDSTMDPDAARDTVGDRAVLQGNLDPCALYAPPDVLRR 306
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L G I NLGHG+ P DP++ V V
Sbjct: 307 EVQHMLAGFGPHHHIGNLGHGMLPDHDPEHARVFVDAVHEHS 348
>gi|1498643|gb|AAB18294.1| uroporphyrinogen decarboxylase [Mus musculus]
Length = 367
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 181/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGIEVTMVPGKGPSFPEPLREERDLERLRDPAAAASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSSSTMAQAKRWLYQRPQASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP---- 238
L+DV YLI Q+ AG +Q+F++HAG LG F +A + + V+
Sbjct: 194 ILTDVLVPYLIGQVAAGAQALQLFESHAGHLGTELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 239 -NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARERVGKAVTLQGNLDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G I NLGHG+ P +DP+ V V V
Sbjct: 313 SEEEIGRLVQQMLDDFGPQRSIANLGHGLYPDMDPERVGAFVDAVHKHS 361
>gi|296157530|ref|ZP_06840365.1| uroporphyrinogen decarboxylase [Burkholderia sp. Ch1-1]
gi|295892302|gb|EFG72085.1| uroporphyrinogen decarboxylase [Burkholderia sp. Ch1-1]
Length = 366
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 127/353 (35%), Positives = 186/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + +P + E+TLQP+
Sbjct: 7 NDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNATRGRAGSFLGLAKSPAFATEVTLQPLE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYLL 121
RY DAAILFSDIL + DA+G + FV EGP+ P+ T++ P+ID L Y
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLEFVTGEGPKFARPVRTEDDVARLAVPDIDATLRY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 125 -VTDAVREIRTALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +LD + A YL AQI AG + IFDT G L + ++ ++ + +++S ++R
Sbjct: 184 MHRILDVNARAVAAYLNAQIEAGAQAVMIFDTWGGALADGVYQRFSLHYIQQVVSQLKRD 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ ++F KG G L T +A+GLDW+V LS A E + + +QGN+DP
Sbjct: 244 HDGEKVPVVTFTKGGGLWLDEIAE-TGVDAVGLDWTVNLSKARERVGGKVALQGNIDPSV 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 303 LFAPPAAIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|241664753|ref|YP_002983113.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12D]
gi|240866780|gb|ACS64441.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12D]
Length = 367
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 181/353 (51%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D ++ L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD--MSSLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F +++ +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG +Q+FDT G L + ++ ++ + R+++ +R
Sbjct: 185 ILEINAQAVIDYLNAQIEAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVNGIRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+G+DW+V L A + +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLEAMAA-TGADALGVDWTVNLQLARQRTAGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHSFS 356
>gi|255262906|ref|ZP_05342248.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
gi|255105241|gb|EET47915.1| uroporphyrinogen decarboxylase [Thalassiobium sp. R2A62]
Length = 344
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 149/340 (43%), Positives = 205/340 (60%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L L G + PPIW+MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIR
Sbjct: 4 QKTVLRALSGEALPVPPIWMMRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
RY FDAAILF+DIL++ ALG ++ FV EGPR+ ITT + ++L PI+
Sbjct: 64 RYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITTADQLAALKPAADVNDHLSPIY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I IL K LP TLIGF G+PWTVA+YMI+G D G +N F+ L+D +
Sbjct: 124 ETIKILSKSLPVGTTLIGFAGSPWTVATYMIAGQGTPDQGPAHALKDENRLVFDGLIDII 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + YL AQI AG +VI++FD+ AG L +F Y+ + +I SA++ YP+ I+
Sbjct: 184 TDATIVYLSAQIEAGAEVIKLFDSWAGSLHGDDFAQYSIAPMRKITSALKSAYPDVPIIA 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG N ++ I LD V +A + +Q G VQGNL +V G ++
Sbjct: 244 FPRGAGEKYGNLHTAIGADCIALDDGVSADWAAKNVQTGGCVQGNLASRHMVTGGDALVA 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+D GP IFNLGHGITP DP+NV ++ TVR
Sbjct: 304 ETRKIVDAFSGGPHIFNLGHGITPDADPENVQLMIDTVRG 343
>gi|217978673|ref|YP_002362820.1| uroporphyrinogen decarboxylase [Methylocella silvestris BL2]
gi|217504049|gb|ACK51458.1| uroporphyrinogen decarboxylase [Methylocella silvestris BL2]
Length = 349
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 164/338 (48%), Positives = 213/338 (63%), Gaps = 2/338 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+K L VL G + PPPIWLMRQAGRYLPEYR++R K +FLD CY+P+ E TLQPIRR
Sbjct: 8 KKFLRVLDGEALFPPPIWLMRQAGRYLPEYRELRAKTPSFLDFCYSPKIAAEATLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILV+ DALG+ V F NEGPR++PI ++E + N ++ L L P+F+
Sbjct: 68 FGFDAAILFSDILVVPDALGQKVSFETNEGPRLEPIQSEEAFE-KLNSEIDLGRLEPVFE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I +R+ LP LIGFCGAPWTVASYM++G D G R+ AY+ F L D L
Sbjct: 127 TIIRIREALPPETALIGFCGAPWTVASYMVAGRGTPDQGPARLLAYRQPELFQQLTDRLV 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ S YL QI AGV+ +QIFDT AG L EFE + I++ V+ ++P+ K I F
Sbjct: 187 EASIRYLCRQIDAGVEAVQIFDTWAGVLPAGEFECWCLAPTKAIVAGVKSRHPDVKIIGF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
KG G L N+ LT +A+GLD +V ++A L QGNLDP+ L+ G +
Sbjct: 247 PKGVGSRLVNFADLTGVDAVGLDSAVDPAWAASALSPGRAAQGNLDPLALIAGGAALQTA 306
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL+ P +FNLGHG+TPQ +NV LV VR
Sbjct: 307 TRRILEAFRGRPHVFNLGHGVTPQTPVENVAALVDLVR 344
>gi|187930563|ref|YP_001901050.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12J]
gi|238058106|sp|B2UGT5|DCUP_RALPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187727453|gb|ACD28618.1| uroporphyrinogen decarboxylase [Ralstonia pickettii 12J]
Length = 367
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 180/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ + P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTDYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D ++ L +
Sbjct: 67 RYALDAAILFSDILTVPDAMGLGLSFAQGEGPRFAKPVRTEADVAALSVPD--MSSLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F +++ +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG +Q+FDT G L + ++ ++ + R++ +R
Sbjct: 185 ILEINAQAVIDYLNAQIDAGAQAVQVFDTWGGALADGIYQQFSLAYMARVVEGIRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVV 296
I F KG G L+ T ++A+G+DW+V L A + +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLEAMAE-TGADALGVDWTVNLQLARQRTAGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ GS IFNLGHGI+ P+ V LV V S
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGGSDGHIFNLGHGISQFTPPEAVSVLVDEVHSFS 356
>gi|73977150|ref|XP_532602.2| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 1 [Canis familiaris]
Length = 364
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 182/349 (52%), Gaps = 12/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG Q+F++HAG LG F +A V + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGA---QLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGL 250
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 251 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 309
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 310 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKYS 358
>gi|269838339|ref|YP_003320567.1| uroporphyrinogen decarboxylase [Sphaerobacter thermophilus DSM
20745]
gi|269787602|gb|ACZ39745.1| uroporphyrinogen decarboxylase [Sphaerobacter thermophilus DSM
20745]
Length = 348
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 111/340 (32%), Positives = 175/340 (51%), Gaps = 6/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W MRQAGRY+ EYR IR + L++C P+ E+TLQPI R
Sbjct: 9 DRFLRACRREPVDRTPVWFMRQAGRYMAEYRAIRAR-HTLLEICAQPDLAAEVTLQPIDR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILF+DIL+ +G ++ F EGP + + + + + +
Sbjct: 68 LGVDAAILFADILLPLVPMGIDLEFAAGEGPVIHNPVREAADVARLVVRDPEEATPAVLE 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R++L + LIGF G P+TVASY+I GG + + + + Y+ ++ L++ L+
Sbjct: 128 AVRLIRRELDGRVPLIGFAGGPFTVASYLIEGGSSRHYRRTKEMMYRAPDVWDALMEKLA 187
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++A YL QI AG +Q+FD+ G L ++E V RI++ V I F
Sbjct: 188 DMTARYLAGQIRAGAQAVQLFDSWVGALSPLDYERRVLPYVQRIVAHVAPL--GVPVIVF 245
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L T ++ +G+DW + L + + VQGNLDP+ L + +
Sbjct: 246 GTGTAGLLSLMA-TTGADVVGIDWRIALDDGWARVGHDRAVQGNLDPLVLFAPREEIERH 304
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V IL G P IFNLGHGI P+ NV +V+ V
Sbjct: 305 VRDILARAGGRPGHIFNLGHGILPETPVDNVRYVVELVHE 344
>gi|66801513|ref|XP_629682.1| uroporphyrinogen decarboxylase [Dictyostelium discoideum AX4]
gi|74851092|sp|Q54DF9|DCUP_DICDI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|60463076|gb|EAL61271.1| uroporphyrinogen decarboxylase [Dictyostelium discoideum AX4]
Length = 364
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 182/345 (52%), Gaps = 4/345 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ +G + P+W+MRQAGRYLPE++ +R +F +C TPE ++TLQP+
Sbjct: 15 KNDTFLKACRGEEVPYVPVWIMRQAGRYLPEFKSVRADV-DFFSVCRTPELACKVTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAI+FSDILV+ A+G V+ + +GP +PI T E L
Sbjct: 74 DRFPLDAAIIFSDILVVPQAMGIEVQMIPGKGPFFPNPIRTIEDLSRVQFPVDVNKELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++++ RK+L + LIGF GAPWT+ +Y I G ++ + Y++ + L
Sbjct: 134 VFDALTLTRKRLEGRVPLIGFTGAPWTLMTYCIEGSGGTTMSNSKSWLYKHPAESHKFLS 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ V +YL+ QI AG +QIFD+ + L F+ Y + +I V+ +P
Sbjct: 194 MLTRVCIDYLLGQIKAGAQALQIFDSWSNELSPAMFKEYCLPYLVQIGKEVKAVHPEIPL 253
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAKG+ + L++ + + +G+DW++ S A E + +QGNLDP L G+QV+
Sbjct: 254 ICFAKGSNFALEDLSKSGAYDVLGIDWTIEPSVAREMVADRVSLQGNLDPCVLYCGDQVI 313
Query: 302 IDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D +L G + I NLGHG+ P + VK V
Sbjct: 314 RDQTQKMLQSFGTTKRLIANLGHGMHPTHPIEGPESYVKAVHELS 358
>gi|295678129|ref|YP_003606653.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1002]
gi|295437972|gb|ADG17142.1| uroporphyrinogen decarboxylase [Burkholderia sp. CCGE1002]
Length = 366
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 126/353 (35%), Positives = 186/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+
Sbjct: 7 NDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNATRGRAGSFLGLAKNPAFATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYLL 121
RY DAAILFSDIL + DA+G + FV EGP+ P+ T++ P+ID L Y
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLEFVNGEGPKFARPVRTEDDVARLAVPDIDATLRY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 125 -VTDAVREIRMALKDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+L+ + A YL AQI AG + IFDT G L + ++ ++ R + +++S ++R+
Sbjct: 184 LQRILEINARAVAAYLNAQIEAGAQAVMIFDTWGGALADGIYQRFSLRYIEQVVSQLKRE 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L + + +A+GLDW+V L A E + + +QGN+DP
Sbjct: 244 HDGEKVPVIAFTKGGGLWLDDIAA-SGVDAVGLDWTVNLGKARERVGGKVALQGNIDPSV 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 303 LFAPPAAIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|325294475|ref|YP_004280989.1| Uroporphyrinogen decarboxylase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064923|gb|ADY72930.1| Uroporphyrinogen decarboxylase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 346
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 130/340 (38%), Positives = 199/340 (58%), Gaps = 4/340 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL+ +G + PIW+MRQAGRY YR+IR + +F+++C P+ E+TL PI
Sbjct: 2 KDHPILKAARGEKTDYTPIWIMRQAGRYSERYRKIRAQAGSFMELCKNPKLAAEVTLIPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV + +G +V FVE +GP ++P + + I L +
Sbjct: 62 EEIGIDAAILFSDILVPLEKMGIDVSFVEGKGPILEPKAEKLEDVEKLKIPEPEKDLPYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +++K+L + LIGF GAP+T+ASYM+ GG K++ + + ++ L+
Sbjct: 122 LETIQLIKKRLTDR-PLIGFSGAPFTLASYMLEGGSSKNYIAAKSTMWNEPELWDALMSK 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ EYL +QI AGVD+IQIFD+ G L + ++E + RI++ ++++YP I
Sbjct: 181 LAETVIEYLSSQIKAGVDLIQIFDSWMGVLSKDDYEKFVFPYTERIVNELKKRYPEIPII 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F AG++L+ RL+ + IGLDW + FALE + +QGNLDP+ L +++ +
Sbjct: 241 HFGVNAGHLLEVNNRLS-VDVIGLDWKTEIPFALER-IDKSIQGNLDPVTLFADEKIIEE 298
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V IL + L + IFNLGHGI P DPK LV TV
Sbjct: 299 RVRKILIEGLKARGHIFNLGHGILPPTDPKKAKFLVDTVH 338
>gi|148253695|ref|YP_001238280.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. BTAi1]
gi|172047309|sp|A5EDY0|DCUP_BRASB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146405868|gb|ABQ34374.1| uroporphyrinogen decarboxylase [Bradyrhizobium sp. BTAi1]
Length = 343
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 155/342 (45%), Positives = 211/342 (61%), Gaps = 2/342 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++VL G + PP+W+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIR
Sbjct: 2 NKPFIDVLAGQRQSAPPVWMMRQAGRYLPEYREVRAKAGGFLDLCFNPEMAAEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T E + L L +F
Sbjct: 62 RFGFDAAIIFSDILVIPHALGRSVRFEVGEGPRLDPLDTPE-KIATLAGHADLTKLDAVF 120
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R +LP LIGFCGAPWTVA+YM++G D R+ AY AF+ ++D L
Sbjct: 121 EALRRVRAELPKSTALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYAQPEAFSRIIDAL 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S YL+ Q+ AG D +QIFDT AG L EF ++A RI+ VR P+AK I
Sbjct: 181 VESSIAYLLKQLEAGADALQIFDTWAGVLSPREFARWSAAPTRRIVEGVRNARPDAKIIG 240
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG +L Y T +A+ +DW+ S E +Q + VQGNLDP+ L+ G +
Sbjct: 241 FPRGAGALLPGYVAETAVDAVSIDWTAEPSLVRERVQSKVAVQGNLDPLALMTGGAALDQ 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI P+ +V ++K VR+ K
Sbjct: 301 AVDDVLASYAGGRHIFNLGHGILPETPIAHVEQMLKRVRAYK 342
>gi|332527649|ref|ZP_08403695.1| uroporphyrinogen decarboxylase [Rubrivivax benzoatilyticus JA2]
gi|332112052|gb|EGJ12028.1| uroporphyrinogen decarboxylase [Rubrivivax benzoatilyticus JA2]
Length = 365
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 123/354 (34%), Positives = 181/354 (51%), Gaps = 16/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQP 62
+ + L P+WLMRQAGRYLPEYR R+K +F+ + P+Y E+TLQP
Sbjct: 6 QNDQFLRACLRQPTTHTPLWLMRQAGRYLPEYRATREKAGNSFMGLATNPQYATEVTLQP 65
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ RY DAAILFSDILV+ DA+G + F EGPR P+ + D L+ L
Sbjct: 66 LDRYALDAAILFSDILVVPDAMGLGLSFGAGEGPRFAHPLRDEASVAALQVPD--LDKLR 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F ++++LRK L + LIGF G+PWT+ASYM+ G D+ + Y + +L
Sbjct: 124 YVFDTVTMLRKALNGRVPLIGFSGSPWTLASYMVEGAGSDDYRVVKQMLYARPDLLHRIL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
D + YL QI G + IFD+ G L + F+ ++ R+++ ++R++
Sbjct: 184 DVNAQAVTAYLNQQIECGAQAVMIFDSWGGVLADGVFQEFSLEYTRRVVAGLKRQHDGQQ 243
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
I F KG G L+ + ++ +GLDW+ L A +QGNLDP L
Sbjct: 244 IPVIVFTKGGGIWLEQIAAI-GADVVGLDWTANLGDARRRTGDRVALQGNLDPAVLFSNP 302
Query: 299 QVMIDGVNAILDVLGS--------GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ +LD G+ G +FNLGHGI+ P NV LV+ V +
Sbjct: 303 EVIAKEAAKVLDSFGAPQRADGGWGGHVFNLGHGISQHTPPDNVTALVEAVHNH 356
>gi|228473452|ref|ZP_04058205.1| uroporphyrinogen decarboxylase [Capnocytophaga gingivalis ATCC
33624]
gi|228275059|gb|EEK13862.1| uroporphyrinogen decarboxylase [Capnocytophaga gingivalis ATCC
33624]
Length = 342
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 114/344 (33%), Positives = 181/344 (52%), Gaps = 8/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +LQG P +W+MRQAGRYLPE+R +R K+ +F C TPE E+T QP+
Sbjct: 3 KNDLFLRILQGEKTERPAVWMMRQAGRYLPEFRALRTKY-DFFTRCRTPELVAEITTQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDILV+ A+G ++ E GP + PI T+ ++ L
Sbjct: 62 DIVGVDAAILFSDILVVPQAMGIHIEMKEQVGPYLPHPIRTKADIERVQIPEVS-EALGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I + +++L + LIGF GAPWT+ Y + G K+ + FA+ L
Sbjct: 121 VMEGIRLTKERLAGEVPLIGFAGAPWTIFCYAVEGKGSKNFDTAKSFAFSYPEWTAEFLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ AGVD +Q+FD+ G L +++ Y+ +I+ A+ +
Sbjct: 181 KITDTTIAYLREKVKAGVDALQLFDSWGGVLSAEDYQKYSWPYTRQIVEALSEE---VPV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I FAKG Y L+ + + + A+G+DW+ A +L + +QGNLDP L+ +
Sbjct: 238 IVFAKGCWYALEEMSQ-SKAAALGVDWTCSPEMARKLTGGKKVLQGNLDPAWLLAPITQI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ G +I NLGHGI P+V ++ V+ V+S K
Sbjct: 297 KEKTQQMIRAFGKEHYIANLGHGILPEVPVEHARAFVEAVKSFK 340
>gi|294676722|ref|YP_003577337.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus SB 1003]
gi|1169255|sp|P42503|DCUP_RHOCA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|567081|gb|AAA97435.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus]
gi|294475542|gb|ADE84930.1| uroporphyrinogen decarboxylase [Rhodobacter capsulatus SB 1003]
Length = 344
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 144/344 (41%), Positives = 212/344 (61%), Gaps = 4/344 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ IL L+G V+ PP+WLMRQAGRYLPEYR R + +FL +CYTP+ E+TL
Sbjct: 1 MTDK--TILRALKGEVLPTPPVWLMRQAGRYLPEYRATRAQAGDFLSLCYTPDLAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ F EGPRM +T+ E D + L
Sbjct: 59 QPIRRYGFDAAILFADILLLPQALGLDLWFETGEGPRMSTVTSMEGVKGLKGKDDIHDKL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++++ IL ++LP T IGF G PWTVA+YMI+G KD F + AF+ L
Sbjct: 119 APVYETCKILSRELPKETTFIGFAGMPWTVATYMIAGRGSKDQAAAHKFKDTDRAAFSAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D ++ + EYL Q+ AG +V+++FD+ AG L +FE++A I + ++R++P
Sbjct: 179 IDAVTVATIEYLSKQVEAGCEVVKLFDSWAGSLKGQDFEDFAVEPARVITAEMKRRFPGL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGN 298
I+F + AG + T ++ + +D SV +A E ++G VQGNLDP +V G
Sbjct: 239 PVIAFPREAGQGYIGFAEKTGADCVAIDNSVSPDWAAENVQKGKTCVQGNLDPSYMVTGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
Q +++ ++ +GP IFNLGHGITP+ +P NV L++T+R
Sbjct: 299 QELVEATKKVVAAFKNGPHIFNLGHGITPEANPDNVTLLMETIR 342
>gi|296113437|ref|YP_003627375.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis RH4]
gi|295921131|gb|ADG61482.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis RH4]
Length = 358
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ + L
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIVALPKIDMTSS-LDY 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + LL
Sbjct: 128 VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHALLA 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 188 KITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDVPV 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK----EGPVQGNLDPMRLVVGN 298
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 248 ILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFGSP 306
Query: 299 QVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD ++ N GHGIT +P + + V +I
Sbjct: 307 KMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|190893982|ref|YP_001980524.1| uroporphyrinogen decarboxylase [Rhizobium etli CIAT 652]
gi|190699261|gb|ACE93346.1| uroporphyrinogen decarboxylase protein [Rhizobium etli CIAT 652]
Length = 319
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 194/319 (60%), Positives = 241/319 (75%), Gaps = 2/319 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TLQPIRRY FDAAILFSDILVI DA+
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTLQPIRRYGFDAAILFSDILVIPDAM 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E GP MDPI I LN + + YL P+ +++ LR+ LP+ TL+GFC
Sbjct: 61 KRNVRFTEGHGPEMDPIDEAGIARLN--GEEVVAYLRPVLETVRRLREALPDETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY+ RAF LL L+DVSA+YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFAYKYPRAFEHLLMLLADVSADYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EFE +A R V R+I++++ + P+A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFEAFALRPVARMIASIKSQRPHARIIAFAKGAGYQLKAYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ IL LG GP IFNLGHG
Sbjct: 239 IGLDWSVPLTFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDILQHLGHGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRS 343
ITPQ DP +V LV+ VR
Sbjct: 299 ITPQADPDHVRQLVERVRG 317
>gi|86359704|ref|YP_471596.1| uroporphyrinogen decarboxylase [Rhizobium etli CFN 42]
gi|86283806|gb|ABC92869.1| uroporphyrinogen decarboxylase protein [Rhizobium etli CFN 42]
Length = 323
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 191/322 (59%), Positives = 244/322 (75%), Gaps = 2/322 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+ R K +FLD+CYTP++ VE+TLQPIRRY FDAAILFSDILVI DA+
Sbjct: 1 MRQAGRYLPEYRETRAKAGSFLDLCYTPDHAVEVTLQPIRRYGFDAAILFSDILVIPDAM 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
RNVRF E GP MDPI I LN D ++YL P+ +++ LR +LP L+GFC
Sbjct: 61 KRNVRFTEGHGPEMDPIDEAGIGRLN--GDEVVDYLRPVLETVRRLRHELPEETALLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+FAY++ RAF LL L+DVSA+YL+AQI AG D +Q
Sbjct: 119 GAPWTVATYMIAGHGTPDQAPARLFAYEHPRAFEHLLMLLADVSADYLVAQIDAGADAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG LGE EF+ +A + V R+I++++ + P A+ I+FAKGAGY LK YR+ T ++A
Sbjct: 179 IFDSWAGVLGEKEFDAFAVKPVARMIASIKARRPQARVIAFAKGAGYQLKTYRQKTGADA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
IGLDWSVPL+FA ELQK+GPVQGNLDPMR+V G + + +G++ IL LG+GP IFNLGHG
Sbjct: 239 IGLDWSVPLAFAAELQKDGPVQGNLDPMRVVAGGRALEEGIDDILHHLGNGPLIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSEKI 346
ITPQ DP++V LV+ VR ++
Sbjct: 299 ITPQADPEHVRMLVERVRGSRM 320
>gi|319956754|ref|YP_004168017.1| uroporphyrinogen decarboxylase [Nitratifractor salsuginis DSM
16511]
gi|319419158|gb|ADV46268.1| uroporphyrinogen decarboxylase [Nitratifractor salsuginis DSM
16511]
Length = 346
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 192/347 (55%), Gaps = 5/347 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+++ ++ G P+W+MRQAGRYLPEYR++R+K FLD+C+ PE E+TL
Sbjct: 1 MSDK--IFIDACFGRPTPYTPVWMMRQAGRYLPEYRKVREKAGTFLDLCHNPELAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+ DAAILFSDILV+ + +G + FV EGP DPI ++E
Sbjct: 59 QPVDIVGVDAAILFSDILVVPNEMGMKLDFVAGEGPVFADPIRSREDLDRLIGGKEAAEK 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++++I I+R++L + IGF GAPWT+A+YMI G K + + Y + +
Sbjct: 119 LTYVYETIKIVRERLADDKAFIGFAGAPWTLATYMIEGQGTKTYTLCKKMMYTDPELLHA 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L ++DV YL QI +GVD +QIFD+ A + +++ ++ + + I ++ KYP+
Sbjct: 179 ILRKVTDVVKLYLEKQIESGVDAVQIFDSWASAIEPSKYDEFSWKYMVEIAKYLKEKYPH 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F KG ++ + + G+DW P++ A E L + +QGN++P RL
Sbjct: 239 IPVILFPKGIASFVERGWVYGNFDVFGVDWGTPMALAKEKLGERYVLQGNMEPCRLY-SK 297
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V+++ +++ G IFNLGHGI P V +N V +
Sbjct: 298 EATKECVSSLAELMKDGRHIFNLGHGILPDVPVENAKYFVSLCKELS 344
>gi|134096533|ref|YP_001101608.1| uroporphyrinogen decarboxylase [Herminiimonas arsenicoxydans]
gi|172044177|sp|A4GAF0|DCUP_HERAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|133740436|emb|CAL63487.1| Uroporphyrinogen decarboxylase (URO-D) (UPD) [Herminiimonas
arsenicoxydans]
Length = 360
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 182/350 (52%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+W+MRQAGRYLPEYR R + +FL + P+Y E+TLQP+
Sbjct: 9 KNDTFLRALLRQPTDYTPMWMMRQAGRYLPEYRATRTRAGSFLGLAKNPDYATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RY+ DAAILFSDIL + DA+G + FV+ EGP+ + P+ ++ + L+ L
Sbjct: 69 DRYDLDAAILFSDILTVPDAMGLGLYFVDGEGPKFERPLRDEKAVQALKVPE--LDSLQY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +R +L + LIGF G+PWT+A YM+ GG D + Y + +L
Sbjct: 127 VFDAVTQIRTELKGRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMLYNRPDLMHHILQ 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ A YL AQI AG + +FDT G L + ++ ++ + ++ V+ + +
Sbjct: 187 TNAITVAAYLNAQIDAGAQAVMMFDTWGGALADGIYQQFSLHYMREVMKHVKTEKEGVRI 246
Query: 243 --ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L + ++A+GLDW+V L A ++ +QGNLDP L +
Sbjct: 247 PSIVFTKGGGLWLNEIADV-GADAVGLDWTVNLGAARAQVGDRVALQGNLDPSILFAQPE 305
Query: 300 VMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHGI+ P++V LV V
Sbjct: 306 QIRTEVEKVLMSFGKHAPGSGHVFNLGHGISQFTPPESVSVLVDAVHELS 355
>gi|260813440|ref|XP_002601426.1| hypothetical protein BRAFLDRAFT_224293 [Branchiostoma floridae]
gi|229286721|gb|EEN57438.1| hypothetical protein BRAFLDRAFT_224293 [Branchiostoma floridae]
Length = 368
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 127/348 (36%), Positives = 190/348 (54%), Gaps = 11/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G P+W+MRQAGRYL E+R +R + F +C TPE E+TLQPI
Sbjct: 11 KNDLMLRAARGEKTERVPVWVMRQAGRYLEEFRAMRAE-NEFFKVCQTPELACEVTLQPI 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY-LLNPNIDLFLNYLL 121
RR+ DAAI+FSDILV+ ALG V + +GP +P+ E L+ ++D+ L
Sbjct: 70 RRFQLDAAIIFSDILVVPQALGMTVEMIPGKGPSFPEPLKLPEDLSKLDKDVDVN-KTLG 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +I++ R KL + LIGF GAPWT+ YMI GG + + + + Y+ A + LL
Sbjct: 129 YVFDAITLTRHKLEGKVPLIGFSGAPWTLMCYMIEGGGSESMSKPKQWLYKYEEASHQLL 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY---- 237
+ L+ V +YL+ Q+ AG ++Q+F++HAG L F +A + I V K
Sbjct: 189 NILTKVIIDYLVGQVIAGAQLLQVFESHAGHLCARTFNTFALPYLSIIARQVEEKVRAQG 248
Query: 238 -PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I FAKGA Y +++ + + +GLDW+V A + Q + +QGN+DP L
Sbjct: 249 KEPVPMIIFAKGAHYAIEDLAQ-SGYEVVGLDWTVNPKTARHQTQGKVTLQGNMDPGALY 307
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V +L+ G+ I NLGHGI P +DP +V V V S
Sbjct: 308 ASKEEIRTIVREMLEQFGTQQHIANLGHGIYPTIDPDHVEAFVDAVHS 355
>gi|312375040|gb|EFR22487.1| hypothetical protein AND_15199 [Anopheles darlingi]
Length = 570
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 120/345 (34%), Positives = 191/345 (55%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 225 KNDNLLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRAK-HDFFTVCRTPELACEVTMQPL 283
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + LL N + L +
Sbjct: 284 RRFDLDASIIFSDILVIPQALGIVVEMKPGVGPVLPEPLVGPADLLRLNQTGSIERLKYV 343
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I+++R+ L + L GF GAPWT+ YMI GG K + + + +++ A LLD
Sbjct: 344 GEAITMMRRMLDGKVPLFGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTEHAEASQKLLDI 403
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YP 238
L+D +YL+ Q+ AG ++Q+F++ A L + +F + + + RI + V RK P
Sbjct: 404 LTDQVVDYLVMQVKAGAQMLQVFESSADHLSKEQFLSVSLPCLQRIRTDVLRKLADEQVP 463
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ FAKGA + L + T IGLDW++ A + +QGNLDP +
Sbjct: 464 AVPMVLFAKGAMHSLAEQAQ-TGYEVIGLDWTIDPEEARKRVGPNVTLQGNLDPQDMYKS 522
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 523 SEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMNVLVQAVH 567
>gi|332285683|ref|YP_004417594.1| uroporphyrinogen decarboxylase [Pusillimonas sp. T7-7]
gi|330429636|gb|AEC20970.1| uroporphyrinogen decarboxylase [Pusillimonas sp. T7-7]
Length = 358
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 117/351 (33%), Positives = 183/351 (52%), Gaps = 10/351 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L L + PIWLMRQAGRYLPEY + R + +FL + EY E+TLQ
Sbjct: 7 TLKNDVFLRALMREPVPYTPIWLMRQAGRYLPEYNETRARAGSFLALAQNREYACEVTLQ 66
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P++R++ DAAILFSDIL I A+G + F+ EGP+ PI ++ D ++ L
Sbjct: 67 PLQRFDLDAAILFSDILTIPHAMGLGLDFLAGEGPKFAHPIRHEDDVKKLTVPD--MSRL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F ++S++RK+L + LIGF G+PWTV YM+ G D+ + Y + +
Sbjct: 125 QYVFDAVSLIRKELDGKVPLIGFAGSPWTVGCYMVEGQGSSDYRLIKTMLYSRPDLLHRI 184
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L+ + + +YL AQI AG + IFD+ G L + F+ ++ +++ + R++
Sbjct: 185 LEVNAQATQQYLNAQIQAGAQAVMIFDSWGGVLADDMFQEFSLAYTRKVVQGLVREHEGR 244
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I F KG +++ + +A+GLDW+ LS + +QGN+DPM L G
Sbjct: 245 PVPVIVFTKGGAQWIEDIAAV-GCDAVGLDWTANLSQVRQRVGDAVALQGNIDPMVLFGG 303
Query: 298 NQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + ++D G G +FNLGHGI+ P V LV V +
Sbjct: 304 DAAIRNQARKVIDDFGPVGQGGHVFNLGHGISRFTPPAAVSTLVDEVHTYS 354
>gi|21328660|gb|AAM48666.1| uroporphyrinogen decarboxylase [uncultured marine proteobacterium]
Length = 344
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 151/344 (43%), Positives = 208/344 (60%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M RK IL L G + PIW+MRQAGRYLPEYR R + +FL +CY E E+TL
Sbjct: 1 MTSRK-VILRALAGETLPTAPIWMMRQAGRYLPEYRATRAQAGDFLSLCYNSELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILF+DIL++ ALG ++ FV EGPR+ +TTQE + D +L
Sbjct: 60 QPIRRYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTVTTQEDFAKLKPADDIHAHL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP TLIGF G+PWTVA+YMI+G D G +N F+ L
Sbjct: 120 APIYKTVKILSEELPEATTLIGFAGSPWTVATYMIAGQGTADQGPAHRLKAENPAVFDSL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D +++ + YL AQI AG +V+++FD+ AG L +F Y+ + RI +A++ K+P+
Sbjct: 180 IDLITEGTIHYLSAQIEAGAEVVKLFDSWAGSLKGEDFMKYSIEPMRRITAALKAKFPDV 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I+F +GAG R+ ++ I D + + A LQ EG VQGNL +V G
Sbjct: 240 PIIAFPRGAGEKYAGLHRMIGADCIAFDDGIDAQWVAANLQPEGCVQGNLASSHMVTGGA 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I L GP IFNLGHGITP DP+NV ++ TVRS
Sbjct: 300 ALVAETKRIAGALSKGPHIFNLGHGITPDADPQNVQLMIDTVRS 343
>gi|326559434|gb|EGE09859.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 46P47B1]
gi|326562993|gb|EGE13269.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 12P80B1]
gi|326568569|gb|EGE18641.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC1]
gi|326572469|gb|EGE22461.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC8]
gi|326572484|gb|EGE22473.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis CO72]
gi|326574079|gb|EGE24027.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 101P30B1]
gi|326576043|gb|EGE25962.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis O35E]
Length = 358
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ + L
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSS-LDY 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + LL
Sbjct: 128 VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHALLA 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 188 KITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDVPV 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK----EGPVQGNLDPMRLVVGN 298
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 248 ILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFGSP 306
Query: 299 QVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD ++ N GHGIT +P + + V +I
Sbjct: 307 KMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|84500375|ref|ZP_00998624.1| uroporphyrinogen decarboxylase [Oceanicola batsensis HTCC2597]
gi|84391328|gb|EAQ03660.1| uroporphyrinogen decarboxylase [Oceanicola batsensis HTCC2597]
Length = 343
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 145/344 (42%), Positives = 211/344 (61%), Gaps = 3/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+++ IL+ L+G V PPIW+MRQAGRYLPEYR R+K +FL +CY P+ E+TL
Sbjct: 1 MSDK--TILKALRGEVQKVPPIWMMRQAGRYLPEYRATREKAGDFLSLCYNPDLAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FD AILF+DIL++ ALG ++ FV EGPR+ +T+Q + L
Sbjct: 59 QPIRRYGFDGAILFADILLLPQALGADLWFVTGEGPRLSTVTSQADFDALKPAADVHEVL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++SIL ++LP TLIGF GAPWTVA+YM++G D G +N F+ L
Sbjct: 119 SPIYETVSILSQELPPETTLIGFAGAPWTVATYMVAGRGTPDQGPAHALKAENRALFSAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L++ + YL QI AG +V+++FD+ AG L +F+++A RII+ ++ ++P
Sbjct: 179 IDLLTEGTIAYLSRQIDAGAEVVKLFDSWAGSLSGRDFDDFALAPAKRIIAELKARHPGI 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I+F + AG + T ++ + +D SV +A +Q +G VQGNL +V G Q
Sbjct: 239 PVIAFPRQAGDRYVGFAGDTGADCVAVDDSVSAEWAATHVQVDGCVQGNLASRHMVTGGQ 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+++ I+ GP IFNLGHGITP DP NV ++ TVR
Sbjct: 299 ELVEATRGIVRAFSGGPHIFNLGHGITPDADPDNVQLMIDTVRG 342
>gi|114770078|ref|ZP_01447616.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
gi|114548915|gb|EAU51798.1| uroporphyrinogen decarboxylase [alpha proteobacterium HTCC2255]
Length = 345
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 149/345 (43%), Positives = 204/345 (59%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + I+ L G ++ PP+W+MRQAGRYLPEY+ R +FL +CY PE E+TL
Sbjct: 1 METKNKLIIRALNGEKLSTPPVWMMRQAGRYLPEYKATRSLAGDFLSLCYNPELATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIR+Y FDAAILF+DIL+I ALG + FV EGPR+ IT Q + L +I+ L
Sbjct: 61 QPIRKYGFDAAILFADILLIPQALGAKLWFVTGEGPRLSTITDQNDFDLLGDIENIDQVL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ L LP+ TLIGF GAPWTVA+YMI+G + N F+ L
Sbjct: 121 SPIYETVRKLSSVLPDETTLIGFAGAPWTVATYMIAGRGTPNQKPALDLIKTNPEVFDLL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ ++ + YL QI AG +V++IFD+ AG L FE Y I +R+ +PN
Sbjct: 181 INKITHATVHYLSKQIDAGAEVVKIFDSWAGSLKGELFERYCIEPSKIISDELRKIHPNI 240
Query: 241 KFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
K I F +GA NY + T + + +D SV +A ELQK VQGNLD LV G
Sbjct: 241 KIIGFPRGATNNGYLNYAQSTAVDCVAIDSSVDTQWAANELQKVTCVQGNLDQKLLVSGG 300
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q +I+ I+ L +GP IFNLGHGITP DP NV +++ +R+
Sbjct: 301 QTLINETKRIVKALSNGPHIFNLGHGITPDADPSNVTKMIEAIRN 345
>gi|110637194|ref|YP_677401.1| uroporphyrinogen decarboxylase [Cytophaga hutchinsonii ATCC 33406]
gi|123163791|sp|Q11X05|DCUP_CYTH3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110279875|gb|ABG58061.1| uroporphyrinogen decarboxylase [Cytophaga hutchinsonii ATCC 33406]
Length = 344
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 112/347 (32%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL +G + P+WLMRQAGR LPEYR +R+K F+++C TP E+T+
Sbjct: 1 MQYQNDLILRAARGEAVERTPVWLMRQAGRILPEYRAVREKLSGFIELCTTPALAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ DAAI+FSDILVI +A+G E++GP + T + ++L
Sbjct: 61 QPVDILGVDAAIIFSDILVIPEAMGLPYEMQESKGPFFPKVITSAADIDALLATDAADHL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I + K+L + LIGF GAP+T+ +YMI G K + R F Y + L
Sbjct: 121 TYVYDAIELAVKELNGRVPLIGFAGAPFTILAYMIEGQGSKTFSKARRFLYTEPVLAHRL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++ + YL Q+ AG + QIFD+ AG L ++ ++ R + +I AV P
Sbjct: 181 LEKITLATIAYLKRQVQAGAAMYQIFDSWAGVLPPDQYREFSLRYIKQICEAV----PQV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
F+KGA ++ +++ +GLDW++ + + + + +QGN+DP L + +
Sbjct: 237 PRTVFSKGAFFVREDFNNFP-CETVGLDWNMDIGESKKIIGPHKTLQGNMDPCALYLSEE 295
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ +LD G+ I NLGHG+ P D V V V+ +
Sbjct: 296 QIRVKAKEMLDAFGTQSHIANLGHGLYPDTDKTKVKCFVDAVKEFGV 342
>gi|94312422|ref|YP_585632.1| uroporphyrinogen decarboxylase [Cupriavidus metallidurans CH34]
gi|166234277|sp|Q1LHL3|DCUP_RALME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|93356274|gb|ABF10363.1| uroporphyrinogen decarboxylase [Cupriavidus metallidurans CH34]
Length = 367
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 181/354 (51%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 5 QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D + L
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVAKLAVPD--MASLQY 122
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+F ++S +RK L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 123 VFDAVSEIRKALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYARPDLMH 182
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + + YL AQI AG + +FDT G L + ++ ++ + +++ ++R++
Sbjct: 183 RILDINATAVSAYLNAQIEAGAQAVMVFDTWGGALADGMYQAFSLAYMRKVLQGLKREHD 242
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLV 295
I F KG G L+ + +AIGLDW+V L+ A +QGN+DP L
Sbjct: 243 GQQIPVIVFTKGGGIWLEEIAGI-GPDAIGLDWTVNLAKARRRTEGRVALQGNIDPTVLF 301
Query: 296 VGNQVMIDGVNAILD----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD GS +FNLGHGI+ P+NV LV V +
Sbjct: 302 ASESAIREQVRGVLDSYASAGGSDGHVFNLGHGISQFTPPENVSVLVDEVHNHS 355
>gi|326559711|gb|EGE10121.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 7169]
gi|326564977|gb|EGE15177.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis 103P14B1]
Length = 358
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ + L
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSS-LDY 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L + L GF G+PWT+A+YM+ GG ++ + Y + LL
Sbjct: 128 VMKAVTSIRKALNGQVPLFGFSGSPWTLATYMVEGGSSREFRHTKHMMYATPELLHALLA 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 188 KITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDVPV 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK----EGPVQGNLDPMRLVVGN 298
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 248 ILFTKGGGLWL-DVQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFGSP 306
Query: 299 QVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD ++ N GHGIT +P + + V +I
Sbjct: 307 KMIQIEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|302036575|ref|YP_003796897.1| uroporphyrinogen decarboxylase [Candidatus Nitrospira defluvii]
gi|300604639|emb|CBK40971.1| Uroporphyrinogen decarboxylase [Candidatus Nitrospira defluvii]
Length = 341
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 117/341 (34%), Positives = 180/341 (52%), Gaps = 9/341 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ + ++ P+W MRQAGRY+ EYR++R+K + L++C TP+ ++TLQPI
Sbjct: 2 NDRFLKACRREPVDCTPVWFMRQAGRYMVEYRRLREK-HSILELCKTPDLAAQVTLQPID 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI+F+DIL+ + +G ++ F E EGP + +P+ + ID L +
Sbjct: 61 RFALDAAIIFADILLPLEPMGLSLEFAEGEGPIIHNPVRDRAAVDRLKVIDDT--ELQYV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+IS+ RK L + LIGF GAP+T+ASY I GG +++ + Y+ ++ L+D
Sbjct: 119 MDAISLTRKMLAGRVPLIGFAGAPFTLASYAIEGGSSRNYIHTKQMMYREPETWHRLMDK 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ V YL QI AG +Q+FD+ GCL ++ Y V I ++ + I
Sbjct: 179 FARVITGYLRRQIRAGAQAVQLFDSWVGCLSAGDYAEYVVPHVQLIFEGLK--HEGVPLI 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F G +LK R+ + IG+DW +P+ A + + VQGNLDP+ L +
Sbjct: 237 HFGTGTTAILKAMRQAGG-DVIGIDWRIPIDEAWAMVGYDRAVQGNLDPVTLFGPISEIE 295
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V IL G IFNLGHGI P +NV + V
Sbjct: 296 RRVTDILQRAAGRPGHIFNLGHGILPNTPVENVAATIDLVH 336
>gi|86751122|ref|YP_487618.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris HaA2]
gi|123003760|sp|Q2ISV3|DCUP_RHOP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86574150|gb|ABD08707.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris HaA2]
Length = 348
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 157/348 (45%), Positives = 220/348 (63%), Gaps = 4/348 (1%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M ++ + +EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ + E+
Sbjct: 1 MTQKLVTKPFIEVLSGNRQASPPMWMMRQAGRYLPEYRATRAEAGSFLDLCFNAKLAAEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
TLQPIRR+ FDAAI+FSDILV+ ALGR VRF EGPR+DP+ + ++ N + L+
Sbjct: 61 TLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLNSPDLVGTL-NGAIDLS 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L P+F+++ I+R +L TLIGFCGAP+TVA+YM++G D R+ AYQ+ AF
Sbjct: 120 KLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFA 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
++D L + S +YL+ Q+ AG DV+QIFDT G L EFE + RI+ VR+ P
Sbjct: 180 RIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVSP 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
AK I F +GAG ML ++ T +A+ +DW+ + E +Q + VQGNLDP+ L+ G
Sbjct: 240 GAKIIGFPRGAGAMLPDFIARTGVDAVSIDWTAEPNMIRERVQSKVAVQGNLDPLLLIAG 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ GV+ +L +G IFNLGHGITP +V +VK VR+ K
Sbjct: 300 GSALDQGVDDVLKNFSAGRHIFNLGHGITPDAPVAHVEQMVKRVRAYK 347
>gi|209515772|ref|ZP_03264635.1| uroporphyrinogen decarboxylase [Burkholderia sp. H160]
gi|209503799|gb|EEA03792.1| uroporphyrinogen decarboxylase [Burkholderia sp. H160]
Length = 366
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 126/353 (35%), Positives = 185/353 (52%), Gaps = 16/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L + PIWLMRQAGRYLPEY R + +FL + P + E+TLQP+
Sbjct: 7 NDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNAARGRAGSFLGLAKNPAFATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYLL 121
RY DAAILFSDIL + DA+G + FV EGP+ P+ T++ P+ID L Y
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLEFVNGEGPKFARPVRTEDDVARLAVPDIDATLRY-- 124
Query: 122 PIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ +R L + + LIGF G+PWT+A YM+ GG D + Y
Sbjct: 125 -VTDAVREIRSALKDAQGRQRVPLIGFSGSPWTLACYMVEGGGSADFRTVKSMLYARPDL 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+L+ + A YL AQI AG + IFDT G L + ++ ++ R + ++S ++R+
Sbjct: 184 LQRILEINARSVAAYLNAQIEAGAQAVMIFDTWGGALADGIYQRFSLRYIEEVVSQLKRE 243
Query: 237 YPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I+F KG G L + + +A+GLDW+V L A E + + +QGN+DP
Sbjct: 244 HDGEKVPVIAFTKGGGLWLDDIAA-SGVDAVGLDWTVNLGRARERVGGKVALQGNIDPSV 302
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 303 LFAPPATIRMEARAVLDSFGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|39998542|ref|NP_954493.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens PCA]
gi|81700825|sp|Q746R5|DCUP_GEOSL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|39985489|gb|AAR36843.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens PCA]
gi|298507485|gb|ADI86208.1| uroporphyrinogen decarboxylase [Geobacter sulfurreducens KN400]
Length = 340
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 131/340 (38%), Positives = 183/340 (53%), Gaps = 8/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLPEY +R K FL++C TPE E+T+QPI
Sbjct: 2 NNRFLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSKC-TFLELCKTPELAAEVTIQPID 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
N DAAILFSDIL + +G + FV GP + + I + +
Sbjct: 61 ILNVDAAILFSDILTPVEPMGLKLDFVP--GPVFEHPVRTMADVEKLRIPNPEEDVPYVL 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I ILR++L + LIGF GAP+T+A YM+ G KD + Y + L+D +
Sbjct: 119 DTIKILRRELAGRVPLIGFGGAPFTLACYMVEGKGSKDWANIKRMMYAAPDVYAALMDKV 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL AQI AG IQIFDT G L ++E Y ++I+ + R+ N I
Sbjct: 179 TMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLINGLNRQ--NTPVIH 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ ++ + +GLDW V L A ++ + VQGNLDP L +V+
Sbjct: 237 FVKGAGTMLETVQKAGG-DVMGLDWHVNLGKARDVLGQNMAVQGNLDPTVLYAPKEVIEA 295
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+N + +V+ V
Sbjct: 296 EVKRVLDENAGRPGHIFNLGHGILPTVPPENAIHMVECVH 335
>gi|108760710|ref|YP_633523.1| uroporphyrinogen decarboxylase [Myxococcus xanthus DK 1622]
gi|123074099|sp|Q1D1F0|DCUP_MYXXD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|108464590|gb|ABF89775.1| uroporphyrinogen decarboxylase [Myxococcus xanthus DK 1622]
Length = 348
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 8/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+QP+
Sbjct: 2 NDRLLRAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTVQPVT 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R DAAI+FSDIL+ +A+G + + +GP DP+ + + + +
Sbjct: 61 RLGVDAAIIFSDILIPVEAMGITLELGD-KGPHFPDPVRSAADID-KLGVPDPVEGTGFV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++ + L
Sbjct: 119 AEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLMFEQPELAHRLFGK 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D YL Q+ AG ++QIFD+ G L ++E + + R++S ++ I
Sbjct: 179 LTDTLIPYLKMQVEAGASIVQIFDSWGGALSPWDYERFCIPYLKRMVSELKAT--GVPVI 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMI 302
F G L + T ++ +GLDW++P+ ++ + VQGNLDP+ L + + +
Sbjct: 237 VFGVGMSSHLS-LLKSTGADVVGLDWTLPMDEGRKVLGPDVAVQGNLDPLHLFLPREELD 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V IL G IFNLGHGI P DP LV+ V +
Sbjct: 296 GRVKDILRRAGPEGHIFNLGHGILPPTDPDAAKFLVEAVHRHGV 339
>gi|332531633|ref|ZP_08407530.1| uroporphyrinogen decarboxylase [Hylemonella gracilis ATCC 19624]
gi|332038996|gb|EGI75425.1| uroporphyrinogen decarboxylase [Hylemonella gracilis ATCC 19624]
Length = 369
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 125/359 (34%), Positives = 183/359 (50%), Gaps = 20/359 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L + P+WLMRQAGRYLPEYR R++ +F+ + +Y E+TLQP+
Sbjct: 8 KNDRFLRACLRQATDYTPLWLMRQAGRYLPEYRATRERAGSFMGLATNVDYATEVTLQPL 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ + D L+ L
Sbjct: 68 DRYALDAAILFSDILTVPDAMGLGLSFAQGEGPRFASPVRDEAAVAALAVPD--LDKLRY 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 126 VFDAVTSIRKALDGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKSMLYARPDLMHRILQ 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 186 VNADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGVFQQFSLAYTARVLAQLKRTGVDGQV 245
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP----VQGNLDPMRLV 295
I F KG G L L D +GLDW+V L A L EGP +QGNLDP L
Sbjct: 246 VPRIVFTKGGGLWLHEMGAL-DCEVLGLDWTVNLGTARALVGEGPRGKALQGNLDPNVLF 304
Query: 296 VGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G+ IFNLGHGI+ P++V LV+ V ++
Sbjct: 305 APPTAIEAEVAKVLASFGAPHTDPSRPGPTHIFNLGHGISQHTPPEHVTALVEAVHTQS 363
>gi|194752633|ref|XP_001958625.1| GF12476 [Drosophila ananassae]
gi|190619923|gb|EDV35447.1| GF12476 [Drosophila ananassae]
Length = 356
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIKVPDDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + L+
Sbjct: 130 GDAITMMRHKLDGRVPLIGFSGAPWTLMGYMIEGGGSKTMSKTKAWLKDYPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F ++ + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEDFLEWSVPYLRRIRDELVDRLNKKVIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARNLVGPNITLQGNLDPQDMYRN 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPLASMEVLVEAVH 353
>gi|149204075|ref|ZP_01881043.1| uroporphyrinogen decarboxylase [Roseovarius sp. TM1035]
gi|149142517|gb|EDM30562.1| uroporphyrinogen decarboxylase [Roseovarius sp. TM1035]
Length = 344
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 148/340 (43%), Positives = 207/340 (60%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL L G + PPIW+MRQAGRYLPEYR R++ +FL +CY + E+TLQPIR
Sbjct: 4 QKTILRALAGETLPTPPIWMMRQAGRYLPEYRATREEAGDFLSLCYNSDLATEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
RY FDAAILF+DIL++ ALG ++ FV EGPR+ IT + + L P++
Sbjct: 64 RYGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITDRAGLEKLKPVADIHETLNPVY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ L LP TLIGF GAPWTVA+YMI+G D G +N F +++ L
Sbjct: 124 QTVRNLAGALPKETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKEVFEGIIERL 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + EYL AQI AG +VI++FD+ AG L +FENYA RIIS ++ ++P I+
Sbjct: 184 TEGTIEYLSAQIAAGAEVIKLFDSWAGSLKGDDFENYAVAPAKRIISELKARHPGIPIIA 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F + AG + + T ++ + +D SV +A E +QK+G VQGNL +V G + ++
Sbjct: 244 FPREAGDNYRGFHAKTGADCVAVDDSVSAQWAAENVQKDGCVQGNLKSSHMVTGGEALVR 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AI+D GP IFNLGHGITP +P NV ++ TVR
Sbjct: 304 ETRAIVDAFAKGPHIFNLGHGITPDANPDNVQLMIDTVRG 343
>gi|146328900|ref|YP_001210198.1| uroporphyrinogen decarboxylase [Dichelobacter nodosus VCS1703A]
gi|172047326|sp|A5EX29|DCUP_DICNV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146232370|gb|ABQ13348.1| uroporphyrinogen decarboxylase [Dichelobacter nodosus VCS1703A]
Length = 345
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 134/346 (38%), Positives = 197/346 (56%), Gaps = 11/346 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L VL+G + P+W+MRQAGRYL EYR++R K +FLD+C PE EL LQP+
Sbjct: 2 KNDLFLRVLRGEKVERTPVWIMRQAGRYLAEYRKLRAKVPHFLDVCRNPELACELALQPL 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLL 121
+R+ DAAILFSDIL I DA+G + FV EGP+ P+ + I L L+Y
Sbjct: 62 QRFPLDAAILFSDILTIPDAMGLGLSFVAGEGPQFAKPLRSSAAIESLTLPPSGSLDY-- 119
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F ++S ++ L + + LIGF G+PWT+A+YMI GG KD + FA+ +A + LL
Sbjct: 120 -VFAAVSATKRALNDRVPLIGFAGSPWTLAAYMIEGGASKDFAFAKSFAFSQPQAMDVLL 178
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+ +YL QI AG + IFD+ G L +E ++ + +I++AV + A
Sbjct: 179 TQLTCAITDYLRGQIKAGAQAVMIFDSWGGVLPYWAYEQFSLPYLKKIVAAV---HTVAP 235
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I F KG G L ++ + A+G+DW+V L+ A + + + +QGNLDP L+ +
Sbjct: 236 VIVFTKGGGLWLAA-QKTIGAAALGVDWTVSLAAARKIVGESIVLQGNLDPTFLMTDPKT 294
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V L G+G +IFNLGHGITP P NV +++ V
Sbjct: 295 IRQAVAKTLADYGNGHRYIFNLGHGITPNASPDNVAAMIEAVHELS 340
>gi|322417560|ref|YP_004196783.1| uroporphyrinogen decarboxylase [Geobacter sp. M18]
gi|320123947|gb|ADW11507.1| uroporphyrinogen decarboxylase [Geobacter sp. M18]
Length = 339
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 127/340 (37%), Positives = 181/340 (53%), Gaps = 9/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+QP+
Sbjct: 2 NTRFLDACWGKPVDRVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVTIQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + +G + F GP PI T + + + +
Sbjct: 61 ILGVDAAILFSDILTPIEPMGMELDFTP--GPVFTKPIRTMADVEALKIPKMETD-VPYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y + L++
Sbjct: 118 LDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYAEPEIYAALMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R N I
Sbjct: 178 ITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLNRT--NVPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ + + +GLDW V L A ++ + VQGNLDP L +++
Sbjct: 236 HFVKGAGTMLE-IVKEAGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAPKEIIER 294
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+N + +V V
Sbjct: 295 EVKRVLDENAGRPGLIFNLGHGILPTVPPENAIFMVDCVH 334
>gi|170111513|ref|XP_001886960.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638003|gb|EDR02283.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 361
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 126/353 (35%), Positives = 190/353 (53%), Gaps = 14/353 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V P+W+MRQAGRYLPE+R++R+ F ++C +PE E+TLQPI
Sbjct: 9 KNDLLLRAARGEVTERAPVWVMRQAGRYLPEFRKVRES-HEFFEVCRSPELASEVTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
RY DA+I+FSDILVI A+G V+ N GP P+ T ++ L
Sbjct: 68 ERYTGLLDASIIFSDILVIPQAMGMEVQM--NPGPYFPHPLDTPTDVEKLASVVDVDKEL 125
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+FQ+I+ RK L + LIGFCGAPWT+ YMI GG K + + + + ++ L
Sbjct: 126 NYVFQAITRTRKCLGGEVPLIGFCGAPWTLFGYMIEGGGSKTYQKAKTWIFKYPEESKAL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---- 236
L ++DV ++L+ Q+ AG ++Q+FD+ AG L H+F ++ ++ I + VRR+
Sbjct: 186 LAKIADVCVDFLVGQVKAGAQLLQVFDSTAGELSPHDFSIFSFPTLKYISTNVRRRLVEE 245
Query: 237 -YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
P FAKGA + L + + +GLDW + A + K+ +QGN+DP L
Sbjct: 246 NLPATPMTLFAKGANHALGLLAEHSGYDVLGLDWCIDPVEARRIVGKKVALQGNMDPNVL 305
Query: 295 VVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + V + G G +I NLGHGITP VDP+++ + V
Sbjct: 306 YGGRDAIESAVQRMCQGFQAGEGGWIANLGHGITPGVDPEDLKWFFECVHKYS 358
>gi|73543024|ref|YP_297544.1| uroporphyrinogen decarboxylase [Ralstonia eutropha JMP134]
gi|123623792|sp|Q46VY4|DCUP_RALEJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72120437|gb|AAZ62700.1| uroporphyrinogen decarboxylase [Ralstonia eutropha JMP134]
Length = 363
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 183/354 (51%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 5 QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D + L
Sbjct: 65 DRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPD--MASLQY 122
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+F +++ +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 123 VFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMH 182
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+LD + +EYL AQI AG + IFDT G L + ++ ++ + ++++ ++R++
Sbjct: 183 RILDINAQAVSEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRKVLAGLKREHD 242
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
I F KG G L+ T ++AIGLDW+V L+ A +QGN+DP L
Sbjct: 243 GQQIPAIVFTKGGGLWLEGLAD-TGADAIGLDWTVNLAQARRRTGGRVALQGNIDPTVLF 301
Query: 296 VGNQVMIDGVNAILD----VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD GS +FNLGHGI+ P++V LV V
Sbjct: 302 APEAAIREQVRGVLDSYAAAGGSDGHVFNLGHGISQFTPPESVAVLVDEVHRYS 355
>gi|195431882|ref|XP_002063957.1| GK15945 [Drosophila willistoni]
gi|194160042|gb|EDW74943.1| GK15945 [Drosophila willistoni]
Length = 356
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 127/346 (36%), Positives = 191/346 (55%), Gaps = 10/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RKK +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKK-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L+
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIRTPEDLK-RLTPDGALSRLMY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I+++R KL + LIGF GAPWT+ YMI GG K + + + + L+
Sbjct: 129 VGEAITMMRHKLDGRVPLIGFTGAPWTLLGYMIEGGGSKTMSKAKAWLNEYPEDTKLFLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+D +YL Q+ AG ++QIF++ A L + EF +A + RI + + ++
Sbjct: 189 LLTDAIVDYLEMQVQAGAQMLQIFESSAEHLSKEEFLEWAVPYLRRIRNELVDRLTKKVI 248
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P FAKGAG+ LK L + IGLDW+V A E+ +QGNLDP +
Sbjct: 249 PLVPLTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARKEVGPNITLQGNLDPQDMYR 307
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 308 DPEELRTLTTEMVHKFGKSRYIANLGHGITPQTPINSMEVLVEAVH 353
>gi|196008283|ref|XP_002114007.1| hypothetical protein TRIADDRAFT_27497 [Trichoplax adhaerens]
gi|190583026|gb|EDV23097.1| hypothetical protein TRIADDRAFT_27497 [Trichoplax adhaerens]
Length = 370
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 129/350 (36%), Positives = 193/350 (55%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL V +G P+W MRQAGRYLPE+R++R + +F +C TP E+TLQPI
Sbjct: 18 KNDLILRVARGQHTEVIPVWTMRQAGRYLPEFREVRSQ-NDFFTVCRTPSLACEVTLQPI 76
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI-YLLNPNIDLFLNYLL 121
RR+N DAAI+FSDILV+ ALG N+ + +GP P+ + + L+ NID+ L
Sbjct: 77 RRFNLDAAIIFSDILVVPQALGMNIEMIPGKGPIFTSPLESPDDLKELDRNIDVD-ERLG 135
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F +I++ R KL + LIGF G PWT+ +YMI GG + + + Y+ A + LL
Sbjct: 136 YVFDAITLTRHKLKGQVPLIGFAGGPWTLMAYMIEGGGSSTMSKAKKWLYRYEEASHQLL 195
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RK 236
L DV EYL+ Q+ AG ++Q+F++HAG LG F+ Y+ + +I V+ K
Sbjct: 196 RLLVDVIVEYLVGQVKAGAQLLQVFESHAGILGPDMFDKYSLTYLQQICQKVKHNLEAAK 255
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I FAKGA Y L + + +G+DW++ A ++ E +QGNLDP L
Sbjct: 256 LEVVPMIVFAKGAHYALHQLSNI-GYDVVGMDWTIDPEVARNKIGHEVTIQGNLDPCTLY 314
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + ++ G+ +I NLGHGI P +P + V+TV
Sbjct: 315 ASKTELEEKIQKMVKKFGAQRYIANLGHGIYPDAEPAQLDFFVRTVHEYS 364
>gi|222053131|ref|YP_002535493.1| uroporphyrinogen decarboxylase [Geobacter sp. FRC-32]
gi|254767696|sp|B9M7T4|DCUP_GEOSF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221562420|gb|ACM18392.1| uroporphyrinogen decarboxylase [Geobacter sp. FRC-32]
Length = 339
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 127/339 (37%), Positives = 182/339 (53%), Gaps = 7/339 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+QP+
Sbjct: 2 NTRFLDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVTIQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL + +G + FV GP + + I + +
Sbjct: 61 ILGVDAAILFSDILTPVEPMGMALDFVP--GPVFEHPIRTMADVEKLRIPQMEQDVPYVL 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I ILR++L N + LIGF GAP+T+A YM+ G KD + Y + L++ +
Sbjct: 119 ETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPEVYAALMEKV 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL AQI AG IQIFDT G L ++E + ++I+ + R+ N I
Sbjct: 179 TMMDMEYLNAQIKAGAQAIQIFDTWGGVLSPSDYEKFVLPYTTKLINGLNRQ--NVPVIH 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG ML ++ + +GLDW L A ++ VQGNLDP L N V+
Sbjct: 237 FVKGAGTMLDTVKKAGG-DVMGLDWHTNLGKARDILGSMAVQGNLDPTVLFAPNDVIEKE 295
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+N + +V+ V
Sbjct: 296 VKRVLDENGGRSGHIFNLGHGILPTVPPENAIHMVECVH 334
>gi|118591445|ref|ZP_01548843.1| uroporphyrinogen decarboxylase [Stappia aggregata IAM 12614]
gi|118436117|gb|EAV42760.1| uroporphyrinogen decarboxylase [Stappia aggregata IAM 12614]
Length = 342
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 2/342 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + ++ VL G + PPP+W+MRQAGRYLPEYR++R K NFL+ CY+P+ E+TL
Sbjct: 1 MKSQDRSVMRVLSGEKLWPPPVWMMRQAGRYLPEYREVRSKAANFLEFCYSPDLATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+ILFSDI V+ DA+G VRF E GP ++P+++ + L + ++L
Sbjct: 61 QPIRRYGFDASILFSDIFVVPDAIGYPVRFEEGRGPVLEPLSSDLLDRL--EQERAEDHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++S LR +LP TL+GFCGAPWTVA Y ++G +D RV AY++
Sbjct: 119 KPVIETVSRLRAELPQATTLLGFCGAPWTVACYSVAGHTTQDQVAARVGAYRDPDLMQRF 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L S YLI Q+ AG D +QIFDT AG L E F+ ++ RI+ VR P+A
Sbjct: 179 IDQLVTASIRYLIRQLEAGADAVQIFDTWAGVLDEAGFKRWSIEPTRRIVDGVRAVRPDA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I F K + + + T +A+G DW+ P AL++QK+ P+QGNLDPMRLV G +
Sbjct: 239 KIIGFPKASSARMMAFVEGTGVDAVGFDWTAPDQVALDIQKKVPIQGNLDPMRLVAGGKA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +GV IL+ GP +FNLGHG+TP DP NV +V+ VR
Sbjct: 299 LEEGVAHILNTFDKGPLVFNLGHGVTPDADPDNVARMVELVR 340
>gi|326568151|gb|EGE18235.1| uroporphyrinogen decarboxylase [Moraxella catarrhalis BC7]
Length = 358
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 196/351 (55%), Gaps = 10/351 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+W+MRQAGRYLPEY+Q+R + +FL +C + E+TLQP+
Sbjct: 9 KNDRLLRALKFLPVDTTPVWMMRQAGRYLPEYKQVRAQAGDFLSLCKDIDKATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDIL I DA + F E EGP++ + T+ + P ID+ + L
Sbjct: 69 RRFELDAAILFSDILTIPDAFDLGLYFAEGEGPKLTKTVRTESQIMALPKIDMTSS-LDY 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +RK L + L GF G+ WT+A+YM+ GG ++ + Y + LL
Sbjct: 128 VMKAVTSIRKALNGQVPLFGFSGSSWTLATYMVEGGSSREFRHTKHMMYATPELLHALLA 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D +YL AQI AG ++QIFD+ G LG +F ++ +I++ ++ +P+
Sbjct: 188 KITDAVVDYLDAQIVAGAQIVQIFDSWGGVLGHRQFTEFSHAYNRKIVARLKAIHPDVPV 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK----EGPVQGNLDPMRLVVGN 298
I F KG G L + + + ++A+GLDW++PL A L + +QGNLDP +
Sbjct: 248 ILFTKGGGLWL-DIQADSQADALGLDWTMPLDKARHLLHALNAKKAIQGNLDPATIFGSP 306
Query: 299 QVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+++ V+ +LD ++ N GHGIT +P + + V +I
Sbjct: 307 KMIQMEVHRMLDDAYVLDKSGYVANFGHGITQWSNPDHAKAFIDAVHDYQI 357
>gi|307720583|ref|YP_003891723.1| uroporphyrinogen decarboxylase [Sulfurimonas autotrophica DSM
16294]
gi|306978676|gb|ADN08711.1| uroporphyrinogen decarboxylase [Sulfurimonas autotrophica DSM
16294]
Length = 345
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 125/344 (36%), Positives = 191/344 (55%), Gaps = 6/344 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M RK ++ G P+W+MRQAGRYLPEY +R K NFL++C+ PE E+TL
Sbjct: 1 MPTRK-IFVDACFGKETPYTPVWMMRQAGRYLPEYMAVRAKAGNFLNLCHNPEMACEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+ DAAILFSDILVI D +G N+ FV+ EGP+ DPI +E + +
Sbjct: 60 QPVDIVGVDAAILFSDILVIPDEMGMNLSFVKGEGPKFSDPIKNEEDIDRLIGGEEAASK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++ +I +++ KL + LIGF G+PWT+A+YMI G K + + Y N +
Sbjct: 120 LTYVYDTIKLIKTKLADDKALIGFTGSPWTLATYMIEGQGTKTYNVCKKMMYANPELLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L +++V Y+ QI +G+DV+QIFD+ A + ++++ ++ + + I ++ KYP+
Sbjct: 180 ILAKVTEVVKLYMQKQIESGIDVVQIFDSWAAAIEPNKYDEFSWKYMVEIAEYLKEKYPH 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I F KG L N + + G+DWS P+ A E L + +QGN++P RL
Sbjct: 240 IPIIMFPKGIPAFLDNV--YGNFDVFGVDWSTPMELAKEKLGDKYVLQGNMEPCRLY-SK 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V I +V+ IFNLGHGI P V +N ++
Sbjct: 297 EATTEAVEDIQNVMQGKRHIFNLGHGILPDVPVENAKHFIQECH 340
>gi|169861516|ref|XP_001837392.1| uroporphyrinogen decarboxylase [Coprinopsis cinerea okayama7#130]
gi|116501413|gb|EAU84308.1| uroporphyrinogen decarboxylase [Coprinopsis cinerea okayama7#130]
Length = 362
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 124/352 (35%), Positives = 191/352 (54%), Gaps = 13/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G P+W+MRQAGRYLPE+R++R K F ++C TP+ +E+TLQPI
Sbjct: 11 QNDLLLRAARGEKTERAPVWVMRQAGRYLPEFREVR-KSHEFFEVCRTPDLAMEVTLQPI 69
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
RRY DA+I+FSDILV+ A+G V N GP +P+ L
Sbjct: 70 RRYKGLLDASIIFSDILVVPQAMGMEVLM--NPGPSFPEPLDVPADVEKLRKEVDVNKEL 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F++I+ RK L + LIGFCGAPWT+ SYMI GG K + + + ++ L
Sbjct: 128 GYVFEAITQTRKGLEGVVPLIGFCGAPWTLFSYMIEGGGSKTLQKAKTWLFKYPEESKAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---- 236
L ++ V ++L+ Q+ AG ++Q+FD+ AG L H+F+ ++ ++ I VR++
Sbjct: 188 LHRIAVVCVDFLVGQVKAGAQLLQVFDSWAGELSPHDFDRFSFPTLQYIAKTVRQRLAEA 247
Query: 237 -YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
P+ FAKGA Y LK + + +GLDW + + A + + +QGN+DP L
Sbjct: 248 GLPDVPLTLFAKGANYALKKLADESGYDVLGLDWCIDPAEARRIVGDKVALQGNMDPNVL 307
Query: 295 VVGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + + V + G G +I NLGHGITP VDP+++ ++ V
Sbjct: 308 YGGREAIEQTVKRMSAAFSGKGGWIANLGHGITPGVDPEDMRWFLECVHKYS 359
>gi|198415382|ref|XP_002127816.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
[Ciona intestinalis]
Length = 362
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 188/350 (53%), Gaps = 10/350 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + P+W MRQAGRYL E++++R K +F +C TPE E+TLQP+
Sbjct: 8 KNDLFIRAAFCEKVERTPVWAMRQAGRYLKEFQEVRAK-HDFFTVCRTPELACEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR DAAI+FSDILVI ALG V+ V +GP P+ E L
Sbjct: 67 RRMELDAAIIFSDILVIPQALGMEVQMVPGKGPVFPKPLANPEDLKTLNQTPDVDKELGY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +I + R+KL + LIGF GAPWT+ +YM+ GG + R + +++ LLD
Sbjct: 127 VFDAIKLTRQKLDGKVPLIGFSGAPWTLMAYMVDGGSSATFSKARSWLFRSPNESKALLD 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D + +YL+ Q+ AG +Q+F++HAG LG F ++ + +I + V+++ +
Sbjct: 187 MLTDTTIKYLVNQVRAGAQALQVFESHAGILGSSTFAKFSLPYLAKIATQVKKQLSDLGI 246
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLV 295
I FAKGA Y ++ TD + I LDW++ + A E+ +K +QGNLDP L
Sbjct: 247 QRVPLIIFAKGAHYAIEELSA-TDYDVISLDWTMDVKRAREICAKKSKALQGNLDPAMLY 305
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + +++ G I NLGHG+ P +DP+++ V +V S
Sbjct: 306 AGVDEICSATKKMVEDFGVTGHIANLGHGMYPDLDPEHLKAFVNSVHSAS 355
>gi|254472244|ref|ZP_05085644.1| uroporphyrinogen decarboxylase [Pseudovibrio sp. JE062]
gi|211958527|gb|EEA93727.1| uroporphyrinogen decarboxylase [Pseudovibrio sp. JE062]
Length = 342
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 158/343 (46%), Positives = 218/343 (63%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ ++ VL G + PPIW+MRQAGRYLPEYR R K NFLD CY + E+TL
Sbjct: 1 MESHERAVMRVLAGEKLERPPIWMMRQAGRYLPEYRAERAKAPNFLDFCYNTDLATEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDI V+ DALG V F E GP ++P++ ++ L + + +L
Sbjct: 61 QPIRRYGFDAAILFSDIFVVPDALGYPVNFEEGRGPVLEPLSIGQVEKL--DQARTMEHL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ ++ LR +LP TL+GFCGAPWTVA Y ++G +D R+ +Y++
Sbjct: 119 APVIATVERLRAELPTETTLLGFCGAPWTVACYSVAGHTTQDQVAARIGSYKDPALLTAF 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + S YL+AQ+ G D +QIFDT AG L + FE ++ +I+ V+ + PNA
Sbjct: 179 IDQLVEASITYLVAQLDGGADALQIFDTWAGVLDDIGFEQWSVGPTRKIVDGVKAQRPNA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
K I F K + LK Y T +A+GLDW+VP A E+QK PVQGN+DPMRLV G +
Sbjct: 239 KIIGFPKASAARLKRYVEGTGVDAVGLDWTVPAEVAQEIQKIVPVQGNMDPMRLVAGGRA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G++ L+VLG+GP IFNLGHG+ PQ P++V ++VK V+
Sbjct: 299 LETGIDHALEVLGNGPHIFNLGHGVVPQTPPEHVAEMVKRVKG 341
>gi|221330099|ref|NP_001137627.1| updo, isoform B [Drosophila melanogaster]
gi|220902150|gb|ACL83081.1| updo, isoform B [Drosophila melanogaster]
Length = 379
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 34 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KHHDFFTVCRTPELACEVTMQPL 92
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 93 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 152
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 153 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 212
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 213 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIP 272
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 273 VVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRD 331
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 332 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 376
>gi|126732358|ref|ZP_01748158.1| uroporphyrinogen decarboxylase [Sagittula stellata E-37]
gi|126707227|gb|EBA06293.1| uroporphyrinogen decarboxylase [Sagittula stellata E-37]
Length = 345
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 139/339 (41%), Positives = 204/339 (60%), Gaps = 1/339 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L L G + PPIW+MRQAGRYLPEY+ R + +FL +CY P+ E+TLQPIRR
Sbjct: 3 KTLLRALAGETLPTPPIWMMRQAGRYLPEYKATRAEAGDFLSLCYNPDLAAEVTLQPIRR 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAILF+DIL++ ALG ++ FV EGPR+ IT+ + ++ + L P+++
Sbjct: 63 YGFDAAILFADILLLPQALGADLWFVTGEGPRLSTITSDADFDKLGRGEMIHDTLSPVYE 122
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ILRK LP +TLIGF GAPWTVA+YMI+G D G +N F ++D L+
Sbjct: 123 TVKILRKTLPEEVTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENRALFEKIIDRLT 182
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ + +YL Q+ AG +V++IFD+ AG L +F+ YA I ++ ++P I+F
Sbjct: 183 EGTIDYLTEQVKAGAEVVKIFDSWAGSLKGDDFDRYALEPARIITQELKSRFPGLPVIAF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ AG + T ++ + +D SV +A E +Q G VQGNL LV G +++
Sbjct: 243 PRQAGDKYIGFHAATGADCVAIDDSVTPEWAAEHVQPGGCVQGNLANTHLVTGGDALVEE 302
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ GP IFNLGHGITP DP+NV ++ VR+
Sbjct: 303 TQRVVRAFSKGPHIFNLGHGITPDADPENVQIMIDAVRA 341
>gi|194291162|ref|YP_002007069.1| uroporphyrinogen decarboxylase [Cupriavidus taiwanensis LMG 19424]
gi|193224997|emb|CAQ71008.1| uroporphyrinogen decarboxylase [Cupriavidus taiwanensis LMG 19424]
Length = 365
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 124/354 (35%), Positives = 179/354 (50%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L+ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 7 QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F + EGPR P+ T+ D + L
Sbjct: 67 DRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRTEADVHKLAVPD--MASLQY 124
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 VFDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMH 184
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ + YL AQI AG + IFDT G L + ++ ++ + R+++ ++R++
Sbjct: 185 RILEINAQAVTAYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRRVLAGLKREHA 244
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
I F KG G L+ T ++AIGLDW+V L+ A +QGN+DP L
Sbjct: 245 GQQVPAIVFTKGGGLWLEALAD-TGADAIGLDWTVNLAEARRRTGGRVALQGNIDPTVLF 303
Query: 296 VGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +LD GS +FNLGHGI+ P+ V LV V
Sbjct: 304 APEAAIRAQVRGVLDSYAAGGGSDGHVFNLGHGISQFTPPEAVSVLVDEVHGYS 357
>gi|156537506|ref|XP_001607401.1| PREDICTED: similar to ENSANGP00000021292 [Nasonia vitripennis]
Length = 874
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 188/350 (53%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE+R++R K +F +C TP E+TLQPI
Sbjct: 528 QNDRILRAARGEPVDKVPVWIMRQAGRYLPEFRELRTK-HDFFSICQTPALACEITLQPI 586
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLFLNYL 120
+R+ DA+I+FSDILVI A+G V GP + +P+ T L P++D L Y
Sbjct: 587 KRFPLDASIIFSDILVIPQAMGLVVEMRPGVGPVLPEPLADPTHISRLKMPDVDKDLGY- 645
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I++ R L + LIGF GAPWT+ YMI GG Q R++ Y+ + L
Sbjct: 646 --VGEAITLTRHSLEGKVPLIGFTGAPWTLMGYMIQGGGSSTMAQARIWLYKYPEESHKL 703
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YL+ Q+ AG ++Q+F++H L F+ Y+ + +I V+ K
Sbjct: 704 LQMITDVIVDYLVMQVKAGAQLLQVFESHGDFLNTELFKEYSLKYFKQISQKVKAKLDSL 763
Query: 238 --PNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMR 293
P I+F KGA ++ + + + IGLDW+V A + +QGN+DP
Sbjct: 764 NIPKVPMIAFPKGATLDSIEIFAKEAGYDVIGLDWTVDPVEARQRVGPNITLQGNMDPTA 823
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + ++ + G +I NLGHGI P +V ++ + S
Sbjct: 824 LYSTTEKVRQRAENMVRLFGKDRYIANLGHGILPDAPIPSVEAFIEGIHS 873
>gi|216564|dbj|BAA02148.1| uroporphyrinogen III decarboxylase [Escherichia coli W3110]
Length = 353
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 11/349 (3%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNIDLFL 117
LQP+RRY DA F L + A+G ++ E R+ P IT + P D
Sbjct: 61 LQPLRRYPLDARSSFRY-LTVPIAMGLGSSILKPEKVRVLPRQITCKADVDKLPIPDPE- 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A
Sbjct: 119 DELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQAL 178
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LLD L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 179 HALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREN 238
Query: 238 PN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL 294
F K + + + T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 239 DGRRVPVTLFTK-SATVAEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSML 296
Query: 295 VVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 297 YAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 345
>gi|299531310|ref|ZP_07044720.1| uroporphyrinogen decarboxylase [Comamonas testosteroni S44]
gi|298720717|gb|EFI61664.1| uroporphyrinogen decarboxylase [Comamonas testosteroni S44]
Length = 371
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 119/360 (33%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L + + P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+
Sbjct: 7 TNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + ++ L +
Sbjct: 67 DRFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVP-DMDKLRYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+PWT+A YM G D+ + Y + +L+
Sbjct: 126 FDAVTNIRKVLNGRVPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 186 NADSVAAYLNAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYTKRVLAQLKRTGVDGSDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L + + + D +GLDW+ L A + +QGN+DP L
Sbjct: 246 PRIVFTKGGGIWLPDMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVL 304
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G IFNLGHGI+ P++V LV+ V S
Sbjct: 305 FAAPEQVAAQARAVLDSFGKPHTDKSTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSHS 364
>gi|241767312|ref|ZP_04765038.1| uroporphyrinogen decarboxylase [Acidovorax delafieldii 2AN]
gi|241361989|gb|EER58160.1| uroporphyrinogen decarboxylase [Acidovorax delafieldii 2AN]
Length = 371
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 121/361 (33%), Positives = 181/361 (50%), Gaps = 22/361 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L + + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 9 TNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAQAGSFMGLAMNVDYATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL + DA+G + F E EGPR + T+ D L+ L
Sbjct: 69 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAQSVRTEADVAQLAAPD--LDKLRY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 127 VFDAVTSIRKALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILA 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPN 239
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 187 VNADAVASYLNAQIDAGAQAVMIFDSWGGVLADGAFQQFSLEYTRRVLAQLKRTGVDGQD 246
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMR 293
I F KG G L + + + D +GLDW+ L A + +QGN+DP
Sbjct: 247 VPRIVFTKGGGIWLDDMKDI-DCEVLGLDWTANLGKARAIVGGQVGGPGKALQGNIDPNV 305
Query: 294 LVVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L ++ V+A+LD G IFNLGHGI+ P++V LV+ V S
Sbjct: 306 LFAPPAQIVTQVHAVLDSFGKPHTDRTTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSH 365
Query: 345 K 345
Sbjct: 366 S 366
>gi|319786377|ref|YP_004145852.1| uroporphyrinogen decarboxylase [Pseudoxanthomonas suwonensis 11-1]
gi|317464889|gb|ADV26621.1| uroporphyrinogen decarboxylase [Pseudoxanthomonas suwonensis 11-1]
Length = 357
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 182/351 (51%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M PE E+TLQP+R
Sbjct: 7 NDRLLRALRRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLAMAKNPELACEVTLQPLR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGP+ + PI + D+ L +
Sbjct: 67 RFPLDAAILFSDILTVPDAMGLGLYFAEGEGPKFERPIRDEADVARLAVPDMETE-LGYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG ++ + + A+ + LL
Sbjct: 126 MDAVRVIRRELDGSVPLIGFSGSPWTLACYMVEGGGSDNYSKIKAMAFNRPELLHRLLGV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+++ YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 186 VTESVIAYLAAQRAAGAQALQVFDTWGGVLSPTLYREFSLPYLQRIARELERGEGEDRTP 245
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
I F KG L+ T ++A+G+DW V L A + +QGNLDP L +
Sbjct: 246 LILFGKGNAPYLEVLAA-TGTDAVGVDWLVDLAEAARRTGGKVALQGNLDPATLYGSPEA 304
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +LD G +FNLGHG++P + P++V LV+ V
Sbjct: 305 IASEAARVLDSYAEGNGGSREGHVFNLGHGMSPDMSPEHVAALVEAVHRHS 355
>gi|121596148|ref|YP_988044.1| uroporphyrinogen decarboxylase [Acidovorax sp. JS42]
gi|166234228|sp|A1WCJ3|DCUP_ACISJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120608228|gb|ABM43968.1| uroporphyrinogen decarboxylase [Acidovorax sp. JS42]
Length = 370
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 119/360 (33%), Positives = 180/360 (50%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + + P+WLMRQAGRYLPEY+ R K +F+ + EY E+TLQP+
Sbjct: 7 QNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAKAGSFMGLATNVEYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR E + + L+ L +
Sbjct: 67 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRDEADVAALAVP-DLDKLRYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 126 FDAVTSIRRALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 186 NADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGCFQQFSLEYTRRVLAQLKRTGVDGQDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L + + + D +GLDW+ L A + +QGN+DP L
Sbjct: 246 PRIVFTKGGGIWLDDMKDI-DCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNVL 304
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 305 FAPPEAVAAQVRAVLDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVEAVHGYS 364
>gi|192290094|ref|YP_001990699.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris TIE-1]
gi|192283843|gb|ACF00224.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris TIE-1]
Length = 338
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 154/338 (45%), Positives = 218/338 (64%), Gaps = 2/338 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQPIRR+ F
Sbjct: 1 MEVLSGNRQASPPMWMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQPIRRFGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DAAI+FSDILV+ ALGR+VRF EGPR+DP+ + ++ N + L+ L P+F+++
Sbjct: 61 DAAIIFSDILVVPYALGRSVRFEVGEGPRLDPLNSPDLVGTL-NNAIDLSKLEPVFEALR 119
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
I+R++L TLIGFCG+P+TVA+YM++G D R+ AYQ+ AF ++D L + S
Sbjct: 120 IVRRELKPETTLIGFCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVESS 179
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
+YL+ Q+ AG DV+QIFDT AG L EFE + RI+ +R+ P K I F +G
Sbjct: 180 IQYLLRQLDAGADVLQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGTKIIGFPRG 239
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
AG +L + T +A+ +DW+ +F E +Q + +QGNLDP+ L+ G + GV+
Sbjct: 240 AGALLPAFVERTGVDAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGSALDQGVDD 299
Query: 308 ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L+ SG IFNLGHGITP +V ++K VR K
Sbjct: 300 VLNNFSSGRHIFNLGHGITPDAPIAHVEQMIKRVRDYK 337
>gi|187479681|ref|YP_787706.1| uroporphyrinogen decarboxylase [Bordetella avium 197N]
gi|115424268|emb|CAJ50821.1| uroporphyrinogen decarboxylase [Bordetella avium 197N]
Length = 356
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 179/349 (51%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + PIWLMRQAGRYLPEY R + +F+ + P Y E+TLQP+
Sbjct: 6 KNDVFLRALLREPVPYTPIWLMRQAGRYLPEYNATRARAGSFMGLAQNPAYATEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D + L
Sbjct: 66 ERYPLDAAILFSDILTVPDAMGLGLDFAPGEGPRFAHPLRDEADVARLAVPD--MEKLRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F ++S +R+ L + LIGF G+PWT+A YM+ G D+ + + Y + +L+
Sbjct: 124 VFDAVSSIRRALDGRVPLIGFAGSPWTIACYMVEGRGSDDYRKIKTLLYSRPELLHRVLE 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
++ + YL AQI AG + IFD+ G L + ++ ++ R+I+ + R+
Sbjct: 184 INAEATTRYLNAQIEAGAQAVMIFDSWGGVLADGLYQAFSLAYTRRVIAGLHREREGRRV 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQ 299
I+F KG G L++ + +A+GLDW+V L + +QGNLDPM L Q
Sbjct: 244 PVIAFTKGGGLWLEDIAA-SGCDAVGLDWTVNLGQARARVADAVALQGNLDPMTLFGSAQ 302
Query: 300 VMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ LD G G +FNLGHGI+ P+ V++LV V
Sbjct: 303 AIRAEARRTLDSFGPVGKGGHVFNLGHGISQFTPPEAVIELVDEVHQYS 351
>gi|83746933|ref|ZP_00943979.1| Uroporphyrinogen decarboxylase [Ralstonia solanacearum UW551]
gi|207744796|ref|YP_002261188.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum IPO1609]
gi|83726353|gb|EAP73485.1| Uroporphyrinogen decarboxylase [Ralstonia solanacearum UW551]
gi|206596206|emb|CAQ63133.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum IPO1609]
Length = 364
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLSLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPD--MASLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVSEIRRALVQGGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 185 ILEINAAAVTDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ T ++A+G+DW+V L A +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLESMAE-TGADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ +G +FNLGHGI+ P++V LV V +
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFS 356
>gi|157415506|ref|YP_001482762.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047167|sp|A8FMU8|DCUP_CAMJ8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157386470|gb|ABV52785.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81116]
gi|307748148|gb|ADN91418.1| Uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
M1]
gi|315932389|gb|EFV11332.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
327]
Length = 340
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|86150605|ref|ZP_01068828.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88596105|ref|ZP_01099342.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562855|ref|YP_002344634.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|24211637|sp|Q9PN54|DCUP_CAMJE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|85838956|gb|EAQ56222.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190946|gb|EAQ94918.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360561|emb|CAL35358.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|284926467|gb|ADC28819.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927133|gb|EFV06484.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 340
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFGNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|226490274|emb|CAX69379.1| uroporphyrinogen decarboxylase [Schistosoma japonicum]
Length = 364
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 199/351 (56%), Gaps = 15/351 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I++ +G ++ P+W+MRQAGRYLPE+R +R+K +F ++C TPE +TLQPI
Sbjct: 9 KNDNIIKAAKGETVSRLPVWIMRQAGRYLPEFRALREK-HDFFEICRTPELACTVTLQPI 67
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLL 121
R++ DAAI+FSDILVI ALG V+ GP+ +P+ + +++ LN N+D+ L
Sbjct: 68 YRFDLDAAIIFSDILVIPQALGMEVKMQPGVGPKFTEPLNSIKDLDRLNANVDVR-KELN 126
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++SI++ R +L + LIGF GAPWT+ SYM+ GG + + + + Y + ++ LL
Sbjct: 127 YVYESITLTRHRLEGKVPLIGFSGAPWTLMSYMVEGGSSNTYSRAKRWLYNDPQSSQKLL 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
+ L+++ E+L+ Q +G ++Q+F++HAG L H F + + RI S VRR+ N
Sbjct: 187 NLLTEIIVEHLVQQALSGAQLLQVFESHAGFLSPHLFSKFCLPYLKRITSEVRRRLFNEH 246
Query: 240 -------AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
I FAK Y L + + + I LDW++ A + + +QGNLDP
Sbjct: 247 KVPRDSIPPLIVFAKDGHYALSDLSK-AGYDVISLDWTISPKLARNYVDSDITLQGNLDP 305
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V ++ G +I NLGHGI P VDP+NV V V
Sbjct: 306 CALYSSENEISILVKEMISDFGLHRYIVNLGHGIYPDVDPENVNKFVDLVH 356
>gi|299065211|emb|CBJ36377.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CMR15]
Length = 403
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 46 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 106 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPD--MASLQYV 163
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 164 FDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 223
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 224 ILEINAAAVIDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 283
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ T ++A+G+DW+V L A +QGNLDP L
Sbjct: 284 QRVPVILFTKGGGLWLESMAE-TGADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 342
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ +G +FNLGHGI+ P++V LV V +
Sbjct: 343 EPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFS 395
>gi|209364185|ref|YP_001425146.2| uroporphyrinogen decarboxylase [Coxiella burnetii Dugway 5J108-111]
gi|207082118|gb|ABS77403.2| uroporphyrinogen decarboxylase [Coxiella burnetii Dugway 5J108-111]
Length = 402
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 188/350 (53%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 46 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + + P ++ L+YL
Sbjct: 106 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 165
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 166 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 222
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 223 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 282
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 283 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 341
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 342 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 391
>gi|148262100|ref|YP_001228806.1| uroporphyrinogen decarboxylase [Geobacter uraniireducens Rf4]
gi|189083008|sp|A5GDW7|DCUP_GEOUR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146395600|gb|ABQ24233.1| uroporphyrinogen decarboxylase [Geobacter uraniireducens Rf4]
Length = 339
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 128/339 (37%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+++QP+
Sbjct: 2 NTRFLDACWGKPVDRTPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELAAEVSIQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL + +G + FV GP + + I + +
Sbjct: 61 ILGVDAAILFSDILTPVEPMGMALDFVP--GPVFEHPIRTMADVEKLRIPQMEQDVPYVL 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I ILR++L N + LIGF GAP+T+A YM+ G KD + Y + L++ +
Sbjct: 119 ETIKILRRELANKVPLIGFGGAPFTLACYMVEGKGSKDWATMKRMMYAAPEVYAALMEKV 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + EYL AQI AG IQIFDT G L ++E Y ++I+ + R+ N I
Sbjct: 179 TMMDMEYLNAQIKAGAQAIQIFDTWGGVLAPSDYEKYVLPYTTKLINGLNRQ--NVPVIH 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG ML + +R + +GLDW + L A E+ + VQGNLDP L V+
Sbjct: 237 FVKGAGTMLDSVKRAGG-DVMGLDWHINLGKAREVLGDMAVQGNLDPTVLFAPKDVIEQE 295
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+N + +V+ V
Sbjct: 296 VKRVLDENAGKPGHIFNLGHGILPTVPPENAIHMVECVH 334
>gi|242021862|ref|XP_002431362.1| Uroporphyrinogen decarboxylase, putative [Pediculus humanus
corporis]
gi|212516630|gb|EEB18624.1| Uroporphyrinogen decarboxylase, putative [Pediculus humanus
corporis]
Length = 346
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 5/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L + G ++ P+W+MRQAGRYLPE+R+IR K +F +C TPE E+T+QPIR
Sbjct: 8 NDRLLRAINGEEVDKIPVWIMRQAGRYLPEFREIRSK-HDFFTICTTPELACEVTIQPIR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAI+FSDILVI ALG V GP DP+ + + L +
Sbjct: 67 RFDLDAAIIFSDILVIPQALGMKVEMKPGVGPFFPDPLESPKDVEKLNFNADIKTELKYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ +I++ R L + LIGF GAPWT+ +YMI GG K + + + YQ LL+
Sbjct: 127 YDAITLTRNSLEGKVPLIGFAGAPWTLFAYMIEGGTSKTMSKAKKWLYQWPEKSKILLNV 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D ++LI Q AG V+Q+F++HA LG F N++ + +I+ V+++ + I
Sbjct: 187 IADAVTKHLINQAKAGAQVLQVFESHAEYLGLDLFNNFSLPFLQKIVLTVKQEI-DVPLI 245
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KGA Y + + + NA+G+DW++ A + +QGNLDP L + +I
Sbjct: 246 IFTKGAHYAINELSK-SGYNAVGIDWTIEPEIARNKSDNSITLQGNLDPCALYLPKDELI 304
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +++ G +I NLGHGI P DP NV + T+ S
Sbjct: 305 EKTKLMIEKFGKKNYIANLGHGIYPDTDPDNVKVFIDTIHS 345
>gi|264676544|ref|YP_003276450.1| uroporphyrinogen decarboxylase [Comamonas testosteroni CNB-2]
gi|262207056|gb|ACY31154.1| uroporphyrinogen decarboxylase [Comamonas testosteroni CNB-2]
Length = 400
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 119/360 (33%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L + + P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+
Sbjct: 36 TNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPL 95
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + ++ L +
Sbjct: 96 DRFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVP-DMDKLRYV 154
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+PWT+A YM G D+ + Y + +L+
Sbjct: 155 FDAVTNIRKVLNGRVPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEV 214
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 215 NADSVAAYLNAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYTKRVLAQLKRTGVDGSDV 274
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L + + + D +GLDW+ L A + +QGN+DP L
Sbjct: 275 PRIVFTKGGGIWLPDMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVL 333
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G IFNLGHGI+ P++V LV+ V S
Sbjct: 334 FAAPEQVAAQARAVLDSFGKPHTDKSTTGPTHIFNLGHGISQFTPPEHVAALVEAVHSHS 393
>gi|316935319|ref|YP_004110301.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris DX-1]
gi|315603033|gb|ADU45568.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris DX-1]
Length = 348
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 157/346 (45%), Positives = 219/346 (63%), Gaps = 4/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +EVL GN PP+W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQ
Sbjct: 4 NLVTKPFMEVLSGNRQASPPMWMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYL 120
PIRR+ FDAAI+FSDILV+ ALGR VRF EGPR+DP+ T + + L+ ID L+ L
Sbjct: 64 PIRRFGFDAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLDTPDKVGTLSSAID--LSKL 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+FQ++ I+R +L TLIGFCG+P+TVA+YM++G D R+ AYQ+ AF +
Sbjct: 122 EPVFQALRIVRGELSPETTLIGFCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKI 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L + S +YL+ Q+ AG DV+QIFDT AG L EFE + RI+ +R+ P
Sbjct: 182 IDVLVESSIQYLLKQLEAGADVLQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
K I F +GAG +L + T +A+ +DW+ +F E +Q + +QGNLDP+ L+ G
Sbjct: 242 KIIGFPRGAGALLPAFVERTGVDAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGS 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +L+ +G IFNLGHGITP +V ++K VR K
Sbjct: 302 ALDQAVDDVLNNFSAGRHIFNLGHGITPDASIAHVEQMIKRVRDYK 347
>gi|17548020|ref|NP_521422.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum GMI1000]
gi|24211636|sp|Q8XU90|DCUP_RALSO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17430326|emb|CAD17091.1| probable uroporphyrinogen decarboxylase (uro-d) (upd) protein
[Ralstonia solanacearum GMI1000]
Length = 364
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 179/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPD--MASLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 185 ILEINAAAVIDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + T ++A+G+DW+V L A +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLESMAQ-TGADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ +G +FNLGHGI+ P++V LV V +
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFS 356
>gi|170049423|ref|XP_001855944.1| uroporphyrinogen decarboxylase [Culex quinquefasciatus]
gi|167871265|gb|EDS34648.1| uroporphyrinogen decarboxylase [Culex quinquefasciatus]
Length = 384
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 185/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++ +R K +F ++C TPE E+T+QP+
Sbjct: 39 KNDNVLRAARGEPVDRVPVWVMRQAGRYLPEFQAVRAK-HDFFEVCRTPELACEVTMQPL 97
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L N ++ L +
Sbjct: 98 RRFDLDASIIFSDILVIPQALGITVEMKPGVGPVLPEPLVGPADLERLNQTGTMDRLKYV 157
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R L I L GF GAPWT+ YMI GG K + + + + A + LL+
Sbjct: 158 GDAITMMRHMLEGRIPLYGFTGAPWTLMGYMIEGGGSKTMSKAKGWLADHPEASHKLLNI 217
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN---- 239
L+D EYL+ Q+ AG ++Q+F++ A L + ++ A + RI + R++
Sbjct: 218 LTDQVIEYLLLQVRAGAQILQVFESSAEHLSKEQYLTVALPYLKRIRDDLHRRFAEEGIT 277
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
F+KGA + L + T + IGLDW++ A + +QGNLDP +
Sbjct: 278 PVPLTLFSKGAMHSLPE-QAATGYDVIGLDWTIDPEEARRLVGPNVTLQGNLDPQDMYKP 336
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 337 KEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMEVLVQAVH 381
>gi|207722146|ref|YP_002252584.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum MolK2]
gi|206587321|emb|CAQ17905.1| uroporphyrinogen decarboxylase (uro-d) (upd) protein [Ralstonia
solanacearum MolK2]
Length = 364
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLSLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPD--MASLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVSEIRRALVQGGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 185 ILEINAAAVTDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ T ++A+G+DW+V L A +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLESMAE-TGADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ +G +FNLGHGI+ P++V LV V +
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFS 356
>gi|157114045|ref|XP_001657956.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877460|gb|EAT41685.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 356
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 187/345 (54%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F ++C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEQVDRVPVWVMRQAGRYLPEFQEVRAK-HDFFEVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V + GP + L N ++ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGITVEMHKGVGPVLPQPLVTPDDLERLNTTGSIDRLKYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R L + L GF GAPWT+ YMI GG K + + + A LL+
Sbjct: 130 GDAITMMRHMLDGKVPLYGFTGAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN---- 239
L+D +YL+ Q+ AG ++Q+F++ A L + ++ N A + RI + +K+
Sbjct: 190 LTDQIVDYLLMQVKAGAQILQVFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGVT 249
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
F+KGA + L + T + IGLDW++ A +L +QGNLDP +
Sbjct: 250 PVPMTLFSKGAMHSLTEQAQ-TGYDVIGLDWTIDPEEARKLAGPNVTLQGNLDPQDMYKS 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 309 PEELRELVLTMVRKFGKHRYIANLGHGITPQTPVESMSVLVQAVH 353
>gi|222112303|ref|YP_002554567.1| uroporphyrinogen decarboxylase [Acidovorax ebreus TPSY]
gi|254767692|sp|B9MGH2|DCUP_ACIET RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|221731747|gb|ACM34567.1| uroporphyrinogen decarboxylase [Acidovorax ebreus TPSY]
Length = 370
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 119/361 (32%), Positives = 182/361 (50%), Gaps = 22/361 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + + P+WLMRQAGRYLPEY+ R K +F+ + EY E+TLQP+
Sbjct: 7 QNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAKAGSFMGLATNVEYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL + DA+G + F E EGPR + + D L+ L
Sbjct: 67 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRDEADVAALAVPD--LDKLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 125 VFDAVTSIRRALNGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILA 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPN 239
+D A YL AQI AG + +FD+ G L + F++++ R+++ ++R +
Sbjct: 185 VNADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGCFQDFSLEYTRRVLAQLKRTGVDGQD 244
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMR 293
I F KG G L + + + D +GLDW+ L A + +QGN+DP
Sbjct: 245 VPRIVFTKGGGIWLDDMKDI-DCEVLGLDWTAHLGKARAIVGGQVGGPGKALQGNIDPNV 303
Query: 294 LVVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + ++ V A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 304 LFAPSAQIVTQVRAVLDSFGTPHTDKTTTGPTHIFNLGHGISQFTPPEHVAALVEAVHGY 363
Query: 345 K 345
Sbjct: 364 S 364
>gi|86153082|ref|ZP_01071287.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121613555|ref|YP_001000918.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005828|ref|ZP_02271586.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|166234243|sp|A1W0M7|DCUP_CAMJJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|85843967|gb|EAQ61177.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87249898|gb|EAQ72857.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
81-176]
gi|315929344|gb|EFV08551.1| Uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
305]
Length = 340
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPIFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|189426294|ref|YP_001953471.1| uroporphyrinogen decarboxylase [Geobacter lovleyi SZ]
gi|238058038|sp|B3EAR8|DCUP_GEOLS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189422553|gb|ACD96951.1| uroporphyrinogen decarboxylase [Geobacter lovleyi SZ]
Length = 340
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 130/341 (38%), Positives = 183/341 (53%), Gaps = 10/341 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLPEY +R + +FL++C TPE E+T+QP+
Sbjct: 2 NNRFLDACWGKPVDRTPVWLMRQAGRYLPEYMAVRSRC-SFLELCKTPELAAEVTIQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + +G + FV GP +P+ T D + + +
Sbjct: 61 ILGVDAAILFSDILTPVEPMGLKLDFVP--GPVFENPVRTMADVEKLRIPDPEAD-VPYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q+I ILRK+L + LIGF GAP+T+A YM+ G KD + Y + L++
Sbjct: 118 LQAIRILRKELAGKVPLIGFGGAPFTLACYMVEGKGSKDWATIKRMMYAAPDVYAALMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + EYL AQI AG IQIFDT G L ++E Y ++I+ + RK I
Sbjct: 178 VTMMDMEYLNAQIRAGAQAIQIFDTWGGVLSPTDYEKYVLPYTTKLINGLNRK--ETPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG+G ML ++ + +GLDW + L A + L E VQGNLDP L + V+
Sbjct: 236 HFVKGSGTMLPVVQKAGG-DVMGLDWHINLGSARDILGPEMAVQGNLDPTTLYAPHAVIE 294
Query: 303 DGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +L + G IFNLGHGI P V P+N +V V
Sbjct: 295 QEVKRVLNENAGRPGHIFNLGHGILPTVPPENAKFMVDCVH 335
>gi|146298708|ref|YP_001193299.1| uroporphyrinogen decarboxylase [Flavobacterium johnsoniae UW101]
gi|189083006|sp|A5FLE7|DCUP_FLAJ1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146153126|gb|ABQ03980.1| uroporphyrinogen decarboxylase [Flavobacterium johnsoniae UW101]
Length = 341
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 185/345 (53%), Gaps = 12/345 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGRYLPE+ ++R K+ +F C TPE E+T+QPI
Sbjct: 3 KNDLFLKALKGETVQRPPVWMMRQAGRYLPEFIELRDKY-DFFTRCQTPELAAEITVQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR DAAILFSDILV+ A+G V EN GP + +PI + P+I L Y
Sbjct: 62 RRIAPDAAILFSDILVVPQAMGIEVLMKENIGPFIPNPIRSMADVQRVYVPDIQESLGY- 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I + ++ L + + LIGF G+PWT+ Y + G K + F + N A + L
Sbjct: 121 --VMDAIKLTKEMLNDEVPLIGFAGSPWTIFCYAVEGRGSKSFDMAKGFCFSNPVAAHTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D + YL ++ AGVD +QIFD+ G L +++ ++ + + +I+ A+
Sbjct: 179 LQKITDTTILYLKEKVKAGVDAVQIFDSWGGMLSPVDYQEFSWKYINQIVEALADL---T 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I F KG + L + + ++A+G+DW+ A L +QGN DP RL+
Sbjct: 236 PVIVFGKGCWFALGEMGK-SRASALGVDWTCSARNARYLSGGNITLQGNFDPSRLLSPIP 294
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V+ ++D G ++ NLGHGI P + + + V+
Sbjct: 295 TIKKMVHEMIDEFGKDKYVVNLGHGILPNIPVDHAKAFIDAVKEY 339
>gi|29653627|ref|NP_819319.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 493]
gi|161831037|ref|YP_001596224.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 331]
gi|38257443|sp|Q83EP0|DCUP_COXBU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083003|sp|A9NB09|DCUP_COXBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29540889|gb|AAO89833.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 493]
gi|161762904|gb|ABX78546.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 331]
Length = 361
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 188/350 (53%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + + P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|21430840|gb|AAM51098.1| SD19419p [Drosophila melanogaster]
Length = 356
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KHHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 130 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRD 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 353
>gi|300024778|ref|YP_003757389.1| uroporphyrinogen decarboxylase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526599|gb|ADJ25068.1| uroporphyrinogen decarboxylase [Hyphomicrobium denitrificans ATCC
51888]
Length = 356
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 151/343 (44%), Positives = 211/343 (61%), Gaps = 2/343 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ L+ G ++PPP+WLMRQAGRYLPEYRQ+R + +FL +CYTP E+TLQPI
Sbjct: 15 SERRFLKPFSGKAVSPPPVWLMRQAGRYLPEYRQVRAEAGSFLKLCYTPRLAAEVTLQPI 74
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ FDAAILFSDILV+ DALG+ VRF E EGPR+DPI T + + L +
Sbjct: 75 RRFGFDAAILFSDILVVPDALGQTVRFEEGEGPRLDPIQTLADLDRLALSNTETKFSL-V 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ LR++LP LIGFCGAPWTVA+Y+ G D R +AY++ F L+
Sbjct: 134 CETVERLRRELPRETALIGFCGAPWTVATYVAEGRGSSDQSAARQWAYRDPDGFQRLIAL 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D S EYL Q+ AG D +QIFD+ AG L E +F+ + +I+ VR ++P+ I
Sbjct: 194 LTDASIEYLSGQVRAGADALQIFDSWAGSLAEDQFQRWVIAPTAKIVREVRARHPDVPII 253
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F +G+ +L +Y T + + D S PL E ++G VQGNLDP+ L G + +
Sbjct: 254 GFPRGSAALLDSYLEGTGVDGVSCDTSCPLGLMQETARKGRVVQGNLDPLLLAAGGEALD 313
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I D + PF+FNLGHGI P P+NV LV+ +R +
Sbjct: 314 KRVDDIRDAMTGLPFVFNLGHGIVPHTPPENVARLVERLRRSR 356
>gi|124265327|ref|YP_001019331.1| uroporphyrinogen decarboxylase [Methylibium petroleiphilum PM1]
gi|171769831|sp|A2SC07|DCUP_METPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|124258102|gb|ABM93096.1| uroporphyrinogen decarboxylase [Methylibium petroleiphilum PM1]
Length = 372
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 119/354 (33%), Positives = 177/354 (50%), Gaps = 16/354 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + P+WLMRQAGRYL EYR R K +F+ + P+Y E+TLQP+
Sbjct: 14 NDRFLRACLRLPTDVTPVWLMRQAGRYLSEYRDTRAKAGSFMGLATNPQYATEVTLQPLD 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ + D + L +
Sbjct: 74 RYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFAHPLRDEADVAKLQVPD--MEKLRYV 131
Query: 124 FQSISILRKKL-----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
F +++ +R+ L P + LIGF G+PWT+A YM+ G D+ + Y+ +
Sbjct: 132 FDAVASIRRALAPAGAPGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTLLYRRPDLMH 191
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L+ +D A YL AQI AG + IFD+ G L + F+ ++ R++ ++++
Sbjct: 192 RILEVNADAVAAYLNAQIEAGAQAVMIFDSWGGVLADGAFQRFSLAYTERVLRQLKKEQG 251
Query: 239 N--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I F KG G L+ + + +GLDW++ L A + +QGNLDP L
Sbjct: 252 GYRVPQIVFTKGGGLWLEAIAD-SGCDVVGLDWTMNLGAARARVGDRVALQGNLDPNVLF 310
Query: 296 VGNQVMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V LD G +FNLGHGI+ P +V LV V S
Sbjct: 311 ADPEQIRAEVARTLDSYGAPSAGSGHVFNLGHGISQHTPPDSVSVLVDAVHSYS 364
>gi|189083002|sp|A9KCZ5|DCUP_COXBN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 361
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 188/350 (53%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + + P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|226226543|ref|YP_002760649.1| uroporphyrinogen decarboxylase [Gemmatimonas aurantiaca T-27]
gi|226089734|dbj|BAH38179.1| uroporphyrinogen decarboxylase [Gemmatimonas aurantiaca T-27]
Length = 351
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 179/343 (52%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L L+ ++ PP+W+MRQAGRYLP+YR +R +FL MC TPE VE+TLQP+
Sbjct: 2 NDLLLRALRREPVSRPPVWMMRQAGRYLPQYRAVRAG-SDFLTMCRTPELAVEVTLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAI+FSDILVI +A+G ++ E GP+ P+ T +D + L +
Sbjct: 61 LIGVDAAIIFSDILVIPEAMGMHLTLDEGVGPQFPSPLRTPADVARLRTVDPE-DQLRYM 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ + R+ L N + LIGF GAPWT+A+YM+ G K + ++ + LLD
Sbjct: 120 LDALRLARRALNNRVPLIGFAGAPWTLAAYMVEGKGTKQFAVAKRMLFEQPAMAHALLDR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++L+AQ+ AG V+Q+F++ AG L EF + + + +A R + I
Sbjct: 180 LATAVGDFLVAQVAAGAQVVQLFESWAGALSPQEFRTFVLPYLTK--AARRAREAGVPVI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGPVQGNLDPMRLVVGNQVM 301
FA GA + L T ++A+G+DW + A +QGNLDP L +
Sbjct: 238 VFAPGASWALGEIAAATGADAVGVDWHTTPAQARRQLAPFNVAMQGNLDPCALYATPAEI 297
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+A++ G + NLGHGI P V P + V V+
Sbjct: 298 RARAHAMIAEFGPIGHVANLGHGILPDVPPAHAKAFVDAVKEW 340
>gi|197116416|ref|YP_002136843.1| uroporphyrinogen decarboxylase [Geobacter bemidjiensis Bem]
gi|226696376|sp|B5E7R1|DCUP_GEOBB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|197085776|gb|ACH37047.1| uroporphyrinogen decarboxylase [Geobacter bemidjiensis Bem]
Length = 339
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 128/340 (37%), Positives = 182/340 (53%), Gaps = 9/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+QP+
Sbjct: 2 NTRFLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELATEVTVQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + +G + F GP PI T + + + +
Sbjct: 61 ILGVDAAILFSDILTPIEPMGMELDFTP--GPVFAKPIRTMADVEALKIPKMETD-VPYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y + + L+D
Sbjct: 118 LDAVKLLRKELATKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMDK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R N I
Sbjct: 178 ITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT--NIPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ + + +GLDW V L A ++ + VQGNLDP L N+++
Sbjct: 236 HFVKGAGTMLE-IVKQAGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAPNEIIER 294
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+ + +V V
Sbjct: 295 EVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCVH 334
>gi|19921920|ref|NP_610501.1| updo, isoform A [Drosophila melanogaster]
gi|8928075|sp|Q9V595|DCUP_DROME RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7303877|gb|AAF58922.1| updo, isoform A [Drosophila melanogaster]
gi|201066011|gb|ACH92415.1| FI07665p [Drosophila melanogaster]
Length = 356
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KHHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 130 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRD 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 353
>gi|329911645|ref|ZP_08275585.1| Uroporphyrinogen III decarboxylase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545825|gb|EGF30945.1| Uroporphyrinogen III decarboxylase [Oxalobacteraceae bacterium
IMCC9480]
Length = 359
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 116/350 (33%), Positives = 181/350 (51%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L L + P+WLMRQAGRYLPEYR R + +FL + P+Y E+TLQP+
Sbjct: 9 KNDTFLRALLRQPTDYTPVWLMRQAGRYLPEYRATRARAGSFLGLAKNPDYATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R+ DAAILFSDIL + DA+G + F + EGP+ + P+ + + D L L
Sbjct: 69 DRFPLDAAILFSDILTVPDAMGLGLYFADGEGPKFERPLRDEAAVMALQVPD--LGDLQY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ +++ +R +L + LIGF G+PWT+A YM+ GG D + + Y + +L
Sbjct: 127 VYDAVTQIRTELDGRVPLIGFSGSPWTLACYMVEGGGSDDFRRVKSMLYDRPDLMHRILS 186
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR--RKYPNA 240
+ A YL AQI AG + IFD+ G L + ++ ++ + +++ + ++
Sbjct: 187 INATAVAGYLNAQIAAGAQAVMIFDSWGGALADGAYQKFSLDYMREVVAQLHLDQEGGRV 246
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F KG G L + ++A+GLDW+V L A ++ + +QGNLDP+ L +
Sbjct: 247 PCIVFTKGGGLWLDQIADI-GADAVGLDWTVNLGRARTQVGHKVALQGNLDPVALFAKPE 305
Query: 300 VMIDGVNAILDVLG----SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V + L G +FNLGHGI+ P V +V V S
Sbjct: 306 QIHAEVASALASYGAPSEGHGHVFNLGHGISQFTQPDAVAVMVDAVHSLS 355
>gi|195332855|ref|XP_002033108.1| GM21135 [Drosophila sechellia]
gi|195581918|ref|XP_002080776.1| GD10665 [Drosophila simulans]
gi|194125078|gb|EDW47121.1| GM21135 [Drosophila sechellia]
gi|194192785|gb|EDX06361.1| GD10665 [Drosophila simulans]
Length = 356
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 184/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 130 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRD 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 353
>gi|212213216|ref|YP_002304152.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuG_Q212]
gi|226696372|sp|B6J229|DCUP_COXB2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|212011626|gb|ACJ19007.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuG_Q212]
Length = 361
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 129/350 (36%), Positives = 189/350 (54%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + + P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+TV++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVETVQNFSI 350
>gi|238025758|ref|YP_002909989.1| uroporphyrinogen decarboxylase [Burkholderia glumae BGR1]
gi|237874952|gb|ACR27285.1| Uroporphyrinogen decarboxylase [Burkholderia glumae BGR1]
Length = 364
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 129/354 (36%), Positives = 181/354 (51%), Gaps = 12/354 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L L + PIWLMRQAGRYLPEY R + +FL + PEY E+TLQ
Sbjct: 4 NLLNDTFLRALLRQPTDYTPIWLMRQAGRYLPEYNATRSRAGSFLGLAKHPEYAAEVTLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ RY DAAILFSDIL I DA+G + F+ EGP+ P+ T+ D+ L
Sbjct: 64 PLERYPLDAAILFSDILTIPDAMGLGLEFLAGEGPKFAHPVRTEADVARLAVPDIGAT-L 122
Query: 121 LPIFQSISILRKKLPN-----HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ +R+ L + + LIGF G+PWT+A YM+ GG D + AY
Sbjct: 123 GYVTDAVREIRRALTDAQGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMAYARPD 182
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+LD D A YL AQI AG + IFDT G L + ++ + + R+++ + R
Sbjct: 183 LMQRILDVNVDAVAAYLDAQIQAGAQAVMIFDTWGGALADGAYQRLSLDPIRRVVAQLAR 242
Query: 236 KYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
++ I F KG G L+ + +A+GLDW+V L A E + +QGNLDP
Sbjct: 243 EHDGERVPVIIFTKGGGLWLEEIAG-SGVDAVGLDWTVNLGRARERVGGSVALQGNLDPS 301
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + A+LD G+ P +FNLGHGI+ P++V +LV V
Sbjct: 302 ILFAPPATIRMEARAVLDSYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 355
>gi|157114049|ref|XP_001657958.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877462|gb|EAT41687.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 417
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 187/345 (54%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F ++C TPE E+T+QP+
Sbjct: 72 KNDNLLRAARGEQVDRVPVWVMRQAGRYLPEFQEVRAK-HDFFEVCRTPELACEVTMQPL 130
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V + GP + L N ++ L +
Sbjct: 131 RRFDLDASIIFSDILVIPQALGITVEMHKGVGPVLPQPLVTPDDLERLNTTGSIDRLKYV 190
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R L + L GF GAPWT+ YMI GG K + + + A LL+
Sbjct: 191 GDAITMMRHMLDGKVPLYGFTGAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLNL 250
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN---- 239
L+D +YL+ Q+ AG ++Q+F++ A L + ++ N A + RI + +K+
Sbjct: 251 LTDQIVDYLLMQVKAGAQILQVFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGVT 310
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
F+KGA + L + T + IGLDW++ A +L +QGNLDP +
Sbjct: 311 PVPMTLFSKGAMHSLTEQAQ-TGYDVIGLDWTIDPEEARKLAGPNVTLQGNLDPQDMYKS 369
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 370 PEELRELVLTMVRKFGKHRYIANLGHGITPQTPVESMSVLVQAVH 414
>gi|85716071|ref|ZP_01047047.1| uroporphyrinogen decarboxylase [Nitrobacter sp. Nb-311A]
gi|85697070|gb|EAQ34952.1| uroporphyrinogen decarboxylase [Nitrobacter sp. Nb-311A]
Length = 372
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 154/341 (45%), Positives = 217/341 (63%), Gaps = 2/341 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ LEVL G PPIW+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQP+
Sbjct: 28 TNKPFLEVLSGRRQAVPPIWMMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPV 87
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ FDAAI+FSDILVI ALGR VRF EGPR+DP+ T + + + + L P+
Sbjct: 88 RRFAFDAAIIFSDILVIPYALGRTVRFEAGEGPRLDPLDTPDKIAAL-SSEADMTKLEPV 146
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++ ++++L + LIGFCGAPWTVA+YMI+G D R+ AY++ AF ++D
Sbjct: 147 FEALRRVKRELDSKTALIGFCGAPWTVATYMIAGQGTPDQAPARMMAYRHPDAFAKVIDA 206
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ D S YL+ Q+ AG D +QIFDT AG L EFE ++ RI++ VRR+ P+AK I
Sbjct: 207 IVDNSIRYLLGQLQAGADALQIFDTWAGVLPPREFEQWSIEPTKRIVAGVRRQVPDAKII 266
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F +GAG +L +Y T +A+ +DW+ S ++Q VQGNLDP+ L+ G +
Sbjct: 267 GFPRGAGALLPSYIEATGVDAVSIDWAAEPSLIRDKVQNRVAVQGNLDPLALIAGGAALD 326
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +L +G IFNLGHGI P+ +V +++ VR
Sbjct: 327 RAVDDVLTNFAAGRLIFNLGHGIQPETPIPHVEQMIRRVRG 367
>gi|149915547|ref|ZP_01904073.1| cobaltochelatase [Roseobacter sp. AzwK-3b]
gi|149810439|gb|EDM70282.1| cobaltochelatase [Roseobacter sp. AzwK-3b]
Length = 344
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 144/340 (42%), Positives = 201/340 (59%), Gaps = 1/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ IL+ L G PPIW+MRQAGRYLPEYR R + +FL +CY + E+TLQPIR
Sbjct: 4 EKTILKALAGEKQTTPPIWMMRQAGRYLPEYRATRAEAGDFLSLCYNSDLATEVTLQPIR 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
RY FDAAILF+DIL++ ALG ++ FV EGPR+ IT Q L PI+
Sbjct: 64 RYGFDAAILFADILLVPQALGADLWFVTGEGPRLSTITDQSGLNALKPASDIHETLNPIY 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ L + LP TLIGF GAPWTVA+YMI+G D G +N F LL+ +
Sbjct: 124 QTVRNLSQALPPETTLIGFAGAPWTVATYMIAGRGTPDQGPAHALKAENKAVFEALLERI 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ + EYL AQI AG + +++FD+ AG L +F+ YA RII+ ++ ++ + I+
Sbjct: 184 TEATIEYLSAQIEAGAECVKLFDSWAGSLKGEDFDTYATAPATRIIAELKARHGDIPIIA 243
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F + AG + T ++ + LD SV +A E +Q G VQGNL +V G + ++
Sbjct: 244 FPREAGDKYIGFHAKTGADCVALDDSVTPEWAAEHVQVSGCVQGNLASKHMVTGGEDLVR 303
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I++ GP IFNLGHGITP+ DP NV ++ TVR
Sbjct: 304 ETRRIVEAFRGGPHIFNLGHGITPEADPDNVQLMIDTVRG 343
>gi|157165236|ref|YP_001467205.1| uroporphyrinogen decarboxylase [Campylobacter concisus 13826]
gi|166234238|sp|A7ZEJ7|DCUP_CAMC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112799940|gb|EAT97284.1| uroporphyrinogen decarboxylase [Campylobacter concisus 13826]
Length = 340
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY +R K +FL +C + E+TLQP+
Sbjct: 3 FIDACLKKPTPYTPVWMMRQAGRYLPEYMAVRAKAGDFLSLCKDYKKASEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G ++RF + EGP E L +I+ + L ++ +I
Sbjct: 63 VDAAILFSDILVVPLEMGMDLRFEKGEGPVFTKPLRDEAALDALSIERSVKSLAYVYDTI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R+ L LIGFCGAPWT+A+YMI GG K++ + Y+N + +L+ ++
Sbjct: 123 KLTRENLAKDKALIGFCGAPWTIATYMIEGGGSKNYAVCKKMLYENPEFLHQILEKVTQA 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y+ QI AGV+ +QIFD+ A L E + + + +I+ +V+ ++P+ I F K
Sbjct: 183 LILYIKEQIKAGVNAVQIFDSWAAALEEQAYFEFGFSYINKIVDSVKAEFPDIPVIVFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + G+DWS P+ A E L +QGN++P RL + + +GV+
Sbjct: 243 GISGYLDKIS--GKFDVFGVDWSTPIELAKEKLSPRYVLQGNMEPTRLY-SKKAIDEGVD 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + P IFNLGHGI P V +N +K V+ +
Sbjct: 300 KILSTMRGAPHIFNLGHGILPDVPVENAKYFIKEVQRKS 338
>gi|91978232|ref|YP_570891.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB5]
gi|123748822|sp|Q132J9|DCUP_RHOPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91684688|gb|ABE40990.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB5]
Length = 348
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 153/348 (43%), Positives = 218/348 (62%), Gaps = 4/348 (1%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M ++ + +EV+ G PP+W+MRQAGRYLPEYR R + +FLD+C+ P+ E+
Sbjct: 1 MTQKLVTKPFIEVISGKRQASPPMWMMRQAGRYLPEYRATRTEAGSFLDLCFNPKLAAEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
TLQPIRR+ FDAAI+FSDILV+ ALGR VRF EGPR+DP+ + ++ N + L
Sbjct: 61 TLQPIRRFGFDAAIIFSDILVVPYALGRAVRFEVGEGPRLDPLNSPDLVGTL-NGAIDLG 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L P+F+++ I+R +L TLIGFCGAP+TVA+YM++G D R+ AYQ+ AF
Sbjct: 120 KLEPVFEALRIVRSELAPETTLIGFCGAPFTVATYMVAGQGTSDQHPARLMAYQHPGAFA 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
++D L + S +YL+ Q+ AG DV+QIFDT G L EFE + RI+ VR+ P
Sbjct: 180 KIIDVLVESSIQYLLKQLEAGADVLQIFDTWGGILPPREFEKWCIEPTRRIVEGVRKVKP 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+AK I F +GAG +L + T +A+ +DW+ ++Q + VQGNLDP+ L+ G
Sbjct: 240 DAKIIGFPRGAGALLPAFIERTGVDAVSIDWTAEPKMVRDQVQTKVAVQGNLDPLLLIAG 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ GV+ +L +G IFNLGHGITP +V +VK VR+ +
Sbjct: 300 GSALDQGVDDVLKNFSAGRHIFNLGHGITPDASIAHVEQMVKRVRAFR 347
>gi|300702527|ref|YP_003744127.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CFBP2957]
gi|299070188|emb|CBJ41479.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum CFBP2957]
Length = 364
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 7 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 67 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALAVPD--MASLQYV 124
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 125 FDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 185 ILEINAAAVTDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 244
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ T ++A+G+DW+V L A +QGNLDP L
Sbjct: 245 QRVPVILFTKGGGLWLESMAE-TGADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 303
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L+ +G +FNLGHGI+ P++V LV V +
Sbjct: 304 EPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFS 356
>gi|288959734|ref|YP_003450075.1| uroporphyrinogen decarboxylase [Azospirillum sp. B510]
gi|288912042|dbj|BAI73531.1| uroporphyrinogen decarboxylase [Azospirillum sp. B510]
Length = 341
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 147/338 (43%), Positives = 211/338 (62%), Gaps = 2/338 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L L G V PP WLMRQAGRYLPEYR++R K +FLD+CY P++ VE+TLQP+RRY
Sbjct: 1 MLAALAGEVRPRPPFWLMRQAGRYLPEYRELRAKAGSFLDLCYNPDFAVEVTLQPLRRYG 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ ALG+ + ++E EGP++DP+ E + D F L P+++++
Sbjct: 61 MDAAILFSDILVVPHALGQPLAYLEGEGPKLDPVRGVEDLK-RLSRDRFHETLAPVYETV 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L +P TLIGF GAPWT+A YM+ G K++ + +AY + F L+D + +V
Sbjct: 120 RRLSTAIPEGTTLIGFAGAPWTIACYMVEGAGSKEYAHVKRWAYGDPAGFGRLIDLIVEV 179
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+A+YL QI AG + +Q+FD+ AG L EF + RI++ V+ K+P I F +
Sbjct: 180 TADYLCHQIEAGAETVQLFDSWAGVLPVDEFRRWVIEPTRRIVALVKAKHPRTPVIGFPR 239
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
GAG+ + Y + +A+GLD +VP ++A LQ PVQGNLDP+ L G + +
Sbjct: 240 GAGHAYEEYVSQSGVDAVGLDTTVPPAWAARTLQTRLPVQGNLDPILLATGGKALETAAR 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL+ L GPF+FNLGHG+ P++V DL + +R
Sbjct: 300 GILEALAGGPFVFNLGHGVIQSTPPQHVADLTRILREW 337
>gi|194858452|ref|XP_001969181.1| GG24087 [Drosophila erecta]
gi|190661048|gb|EDV58240.1| GG24087 [Drosophila erecta]
Length = 356
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 184/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KLHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 130 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLEWGVPYLKRIRDELVDRLTKKAIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARNLVGPNITLQGNLDPQDMYRD 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PEELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 353
>gi|57238116|ref|YP_179366.1| uroporphyrinogen decarboxylase [Campylobacter jejuni RM1221]
gi|148926240|ref|ZP_01809925.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|81675559|sp|Q5HTL9|DCUP_CAMJR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|57166920|gb|AAW35699.1| uroporphyrinogen decarboxylase [Campylobacter jejuni RM1221]
gi|145845411|gb|EDK22504.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315058676|gb|ADT73005.1| Uroporphyrinogen III decarboxylase [Campylobacter jejuni subsp.
jejuni S3]
Length = 340
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 GKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|186682843|ref|YP_001866039.1| uroporphyrinogen decarboxylase [Nostoc punctiforme PCC 73102]
gi|238056490|sp|B2J9R9|DCUP_NOSP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|186465295|gb|ACC81096.1| uroporphyrinogen decarboxylase [Nostoc punctiforme PCC 73102]
Length = 353
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 111/346 (32%), Positives = 189/346 (54%), Gaps = 8/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D P+ +E++LQ
Sbjct: 4 SSTTPHLLRAARGEVVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPDVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNP-NIDLFLN 118
P + + D ILFSDI+ LG ++ E +GP + P+ TQE I L+P + L
Sbjct: 64 PWKAFQPDGVILFSDIVTPLPGLGIDMDIAEGKGPIIHSPLRTQEQIDRLHPLEPEAALP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ I Q+ LR ++ + T++GF GAPWT+A+Y + G K + + A+ + +
Sbjct: 124 FIKTILQA---LRSEVGDKSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L+D A Y QI +G V+Q+FD+ AG L +++ +A R+ V++ +P
Sbjct: 181 QLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I G+ +L+ + + ++ + +DW+V ++ A L K+ VQGNLDP L
Sbjct: 241 DTPLILLVSGSAGVLERMAQ-SGADIVSVDWAVDMADARARLGKQVKVQGNLDPGVLFGS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q + D + + G+ I NLGHG+ P+ +NV +T +
Sbjct: 300 KQFIRDRILDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKE 345
>gi|254416278|ref|ZP_05030032.1| uroporphyrinogen decarboxylase [Microcoleus chthonoplastes PCC
7420]
gi|196176960|gb|EDX71970.1| uroporphyrinogen decarboxylase [Microcoleus chthonoplastes PCC
7420]
Length = 353
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 104/336 (30%), Positives = 176/336 (52%), Gaps = 3/336 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G + PP+W+MRQAGRY+ YR +R K+ +F + PE +E++LQP + +
Sbjct: 10 LLRAARGEKLERPPVWMMRQAGRYMKAYRDLRDKYPSFRERSEIPEIAIEISLQPWKAFR 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D ILFSDIL +G VE++GP +DP + ++ L L L + + +
Sbjct: 70 PDGVILFSDILTPLPGVGIPFDIVESKGPIIDPPIRSQA-QIDGLHPLELEKLTFVGEIL 128
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR+++ N ++GF GAPWT+A+Y I G K++ + A+ + L ++D
Sbjct: 129 QALRQEVGNEAAVLGFVGAPWTLAAYAIEGKSSKNYSIIKGMAFSQPAMLHEFLGKIADA 188
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
A Y+ QI G V+Q+FD+ AG L +++ +A R++ V+ +P+ I +
Sbjct: 189 IAVYVRYQIDNGAQVVQLFDSWAGQLSPQDYDTFALPYQQRVVEQVKATHPDTPLILYIS 248
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G+ +L+ + + + I +DW+V ++ A L + VQGN+DP L + D +
Sbjct: 249 GSAGILERMGK-SGVDIISVDWTVDMAEARQRLGYKMNVQGNMDPGVLFGSQDFIRDRIL 307
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G+ IFNLGHG+ P NV +T +
Sbjct: 308 DTIRKAGNRGHIFNLGHGVLPGTPEDNVRFFFETAK 343
>gi|225691|prf||1310344A decarboxylase,uroporphyrinogen
Length = 367
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 180/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAATGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPV 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ AL V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG K Q + + YQ A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLLG 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
L+ YLI Q+ AG +Q+F++HAG LG F +A + + V+ A
Sbjct: 194 ILTHALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 253
Query: 241 ---KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QG LDP L
Sbjct: 254 TRMPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKAREPVGKTVTLQGELDPCALYA 312
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G +I NLGHG+ P +DP++V + V
Sbjct: 313 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFLDAVHKHS 361
>gi|91790102|ref|YP_551054.1| uroporphyrinogen decarboxylase [Polaromonas sp. JS666]
gi|122967321|sp|Q123Y6|DCUP_POLSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91699327|gb|ABE46156.1| uroporphyrinogen decarboxylase [Polaromonas sp. JS666]
Length = 369
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 124/359 (34%), Positives = 178/359 (49%), Gaps = 20/359 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + P+WLMRQAGRYLPEYR R + +F+ + +Y E+TLQP+
Sbjct: 6 QNDTFLRACLRQATDYTPVWLMRQAGRYLPEYRATRARAGSFMGLATNTDYATEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D + L
Sbjct: 66 ERYPLDAAILFSDILTVPDAMGLGLSFALGEGPRFATPVRDEAAVARLEVPD--MGKLRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + YQ + +L
Sbjct: 124 VFDAVTSIRKALNGRVPLIGFSGSPWTLACYMVEGAGSDDYRLVKTMLYQRPDLMHKMLA 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
+D A YL AQI AG + IFD+ G L + F+ ++ R++ ++R++
Sbjct: 184 VNADAVAAYLNAQIEAGAQAVMIFDSWGGVLADAAFQTFSLAYTARVLGQLKREHDGVKI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQGNLDPMRLV 295
+ F KG G L+ L D +GLDW+V L+ A E +QGNLDP L
Sbjct: 244 PRLVFTKGGGQWLQAMAAL-DCEVLGLDWTVNLAQARARVGENGPHAKALQGNLDPNVLF 302
Query: 296 VGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+LD G IFNLGHGI+ P++V LV V +
Sbjct: 303 ASPAQIETEVAAVLDSFGRPHLDSSQPGPTHIFNLGHGISQHTPPESVEVLVNAVHTHS 361
>gi|221069350|ref|ZP_03545455.1| uroporphyrinogen decarboxylase [Comamonas testosteroni KF-1]
gi|220714373|gb|EED69741.1| uroporphyrinogen decarboxylase [Comamonas testosteroni KF-1]
Length = 371
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 118/360 (32%), Positives = 178/360 (49%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L + + P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+
Sbjct: 7 TNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRAKAGSFMGLATNVDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + ++ L +
Sbjct: 67 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVP-DMDKLRYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +RK L + LIGF G+PWT+A YM G D+ + Y + +L+
Sbjct: 126 FDAVTNIRKALNGRVPLIGFSGSPWTLACYMTEGKGSDDYRTVKSLMYSRPDLMHRILEV 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR---KYPNA 240
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 186 NADSVAAYLNAQIDAGAQAVMIFDSWGGVLADGAFQEFSLTYTKRVLAGLKRIGVDGSDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L + + + D +GLDW+ L A + +QGN+DP L
Sbjct: 246 PRIVFTKGGGIWLPDMKDI-DCEVLGLDWTANLGKARAIVGGEIGGPGKALQGNIDPNVL 304
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G IFNLGHGI+ P++V LV+ V
Sbjct: 305 FAAPEQVAAQARAVLDSFGKPHTDKRTTGPTHIFNLGHGISQFTPPEHVAALVEAVHKHS 364
>gi|253698671|ref|YP_003019860.1| uroporphyrinogen decarboxylase [Geobacter sp. M21]
gi|259645149|sp|C6E7R9|DCUP_GEOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|251773521|gb|ACT16102.1| uroporphyrinogen decarboxylase [Geobacter sp. M21]
Length = 339
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 127/340 (37%), Positives = 182/340 (53%), Gaps = 9/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLP+Y ++R K FL++C TPE E+T+QP+
Sbjct: 2 NTRFLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKC-TFLELCKTPELATEVTVQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL + +G + F GP PI T + + + +
Sbjct: 61 ILGVDAAILFSDILTPIEPMGMELDFTP--GPVFAKPIRTMADVEALKIPKMETD-VPYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +LRK+L + LIGF GAP+T+A YM+ G KD + Y + + L++
Sbjct: 118 LDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + EYL AQI AG IQIFDT G L ++E Y R+I+ + R N I
Sbjct: 178 ITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRT--NIPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ + + +GLDW V L A ++ + VQGNLDP L N+++
Sbjct: 236 HFVKGAGTMLE-IVKQAGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAPNEIIER 294
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G IFNLGHGI P V P+ + +V V
Sbjct: 295 EVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCVH 334
>gi|160896015|ref|YP_001561597.1| uroporphyrinogen decarboxylase [Delftia acidovorans SPH-1]
gi|238058035|sp|A9BPZ7|DCUP_DELAS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160361599|gb|ABX33212.1| uroporphyrinogen decarboxylase [Delftia acidovorans SPH-1]
Length = 370
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 118/360 (32%), Positives = 182/360 (50%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L + + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 7 TNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + ++ L +
Sbjct: 67 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKVVRDEAAVAELAVP-DMDKLRYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 126 FDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKSLMYARPDLMHRILAI 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ + R +
Sbjct: 186 NADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTKRVLAGLNRTGADGQDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L + + L D +GLDW+ L+ A + +QGN+DP L
Sbjct: 246 PRIVFTKGGGIWLPDMKDL-DCEVLGLDWTANLARARAIVGGEVGGPGKALQGNIDPNVL 304
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + A+LD G+ IFNLGHGI+ P++V LV+TV S
Sbjct: 305 FAPPERVAEQARAVLDSFGAPHTDRTTTGPTHIFNLGHGISQFTPPEHVAALVETVHSHS 364
>gi|153952657|ref|YP_001397668.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. doylei
269.97]
gi|166234242|sp|A7H2D8|DCUP_CAMJD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|152940103|gb|ABS44844.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. doylei
269.97]
Length = 340
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 125/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI N
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILN 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPIFDNPISTLEDLE-KLDDQNAHKKLNYVYNA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFSYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYALQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|86150818|ref|ZP_01069034.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124703|ref|YP_004066707.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841988|gb|EAQ59234.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018425|gb|ADT66518.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 340
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 187/340 (55%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLEDLE-KLDNQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 GKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|312115406|ref|YP_004013002.1| uroporphyrinogen decarboxylase [Rhodomicrobium vannielii ATCC
17100]
gi|311220535|gb|ADP71903.1| uroporphyrinogen decarboxylase [Rhodomicrobium vannielii ATCC
17100]
Length = 348
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 143/341 (41%), Positives = 205/341 (60%), Gaps = 1/341 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + K L L+G PP+WLMRQAGRYL EYR++R + +FL++CY PE E+TLQP
Sbjct: 9 KTEPKFLAALKGTAHKAPPMWLMRQAGRYLAEYREVRSQAGSFLNLCYNPELAAEVTLQP 68
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRR++FDAAI+FSDILV+ ALG+++ F E EGP +DPIT+ +++ +
Sbjct: 69 IRRFDFDAAIIFSDILVVPHALGQHLEFREGEGPHLDPITSLADLS-KLSVEKAKSTFSI 127
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++++I L + LIGFCGAPWTVASYM+ G D+ ++ AY+ F +LD
Sbjct: 128 VYEAIDRTISGLGDRTPLIGFCGAPWTVASYMVEGHGSSDYRAAKLLAYREPETFKAILD 187
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + SA YLI Q +AG +QIFD+ A L +++F+ + I+ V+ +PN
Sbjct: 188 MLVEASAMYLIGQANAGARALQIFDSWASALADNDFDAFVIEPTAEIVKRVKAVHPNVPI 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F +GA +Y T +A+G D + PL Q + VQGNLDP+ L+ G M
Sbjct: 248 IGFPRGASPKYADYVARTGVDALGCDTAAPLPTIAAQQDKVTVQGNLDPLLLLAGGDAMD 307
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
VNAIL+ L P++FNLGHGI P ++V L++TVR
Sbjct: 308 RRVNAILEALAPKPYVFNLGHGILPDTPIEHVERLIRTVRG 348
>gi|195381067|ref|XP_002049277.1| uroporphyrinogen decarboxylase [Drosophila virilis]
gi|194144074|gb|EDW60470.1| uroporphyrinogen decarboxylase [Drosophila virilis]
Length = 388
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 126/347 (36%), Positives = 189/347 (54%), Gaps = 10/347 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 43 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 101
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 102 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPEDLK-RLTPDGALSRLTY 160
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L+
Sbjct: 161 VGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPEDTKLFLN 220
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+DV +YL Q+ AG ++Q+F++ A L + EF ++A + RI + ++
Sbjct: 221 LLTDVIVDYLEMQVTAGAQMLQVFESSAEHLSKEEFLLWSAPYLRRIRDDLVDRLTKKVI 280
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
P I FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 281 PAVPLIIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAVVGPNITLQGNLDPQSMYC 339
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G +I NLGHGITPQ ++ LV+ V +
Sbjct: 340 EPNELRSLATEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVHN 386
>gi|282898644|ref|ZP_06306632.1| Uroporphyrinogen decarboxylase HemE [Cylindrospermopsis raciborskii
CS-505]
gi|281196512|gb|EFA71421.1| Uroporphyrinogen decarboxylase HemE [Cylindrospermopsis raciborskii
CS-505]
Length = 350
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 107/344 (31%), Positives = 182/344 (52%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L +G ++ PP+W+MRQAGRY+ YR +R+K+ +F + PE +E++LQ
Sbjct: 4 SSTVPLLLRAARGEKVDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P R + D ILFSDI+ +G ++ E +GP PI TQ+ +D L
Sbjct: 64 PWRAFQPDGVILFSDIVTPLPGMGIDMDIKEGKGPIIFSPIRTQQQVDELHPLDPETA-L 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I Q + LR+++ + T++GF GAPWT+A+Y + G K + + A+ +S + L
Sbjct: 123 PFIRQILGALRQEVGSASTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDSNILHQL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++ A Y+ QI G V+Q+FD+ AG L +++ +A ++ V+R +P
Sbjct: 183 LDKLAESIAVYIRYQIDCGAQVVQMFDSWAGQLSPQDYDIFALPYQKKVFELVKRTHPQT 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I G+ +L+ + ++ + +DW+V ++ A L VQGNLDP L Q
Sbjct: 243 PLILLVTGSAGLLERMA-TSGADILTIDWTVDMADARRRLGNNVKVQGNLDPGVLFGSKQ 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + + G+ I NLGHG+ P+ +NV +T ++
Sbjct: 302 FIRERILDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKN 345
>gi|299134348|ref|ZP_07027541.1| uroporphyrinogen decarboxylase [Afipia sp. 1NLS2]
gi|298591095|gb|EFI51297.1| uroporphyrinogen decarboxylase [Afipia sp. 1NLS2]
Length = 348
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 152/341 (44%), Positives = 210/341 (61%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++VL G PPIW+MRQAGRYLPEYR +R+K FLD+ Y PE E+TLQPIRR
Sbjct: 8 KPFIDVLSGQRQTVPPIWMMRQAGRYLPEYRAVREKAGGFLDLVYNPELAAEVTLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAI+FSDILV+ ALGR+VRF EGPR+DP+ T E F + P+++
Sbjct: 68 FGFDAAIIFSDILVVPHALGRDVRFEVGEGPRLDPLDTPEKIAAEKFSANFATF-EPVYE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R +L ++ LIGFCGAPWTVA+YM++G D R+ AY++ +AF ++D +
Sbjct: 127 ALRRVRSELAPNVALIGFCGAPWTVATYMVAGHGTPDQAPARLLAYRDPKAFAKIIDAIV 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ S YL+ Q+ AG +V+QIFDT AG L EF ++ RI+ VR K P AK I F
Sbjct: 187 ETSIRYLLGQLAAGAEVLQIFDTWAGVLPPAEFTRWSIEPTRRIVEGVRAKVPGAKIIGF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG ML Y T +A+ +DW+ SF E +Q +QGNLDP+ L+ G +
Sbjct: 247 PRGAGAMLPAYVTRTGVDAVSIDWASEPSFMREYVQSRVALQGNLDPLALIAGGDALDKA 306
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI P +V ++ VR+ K
Sbjct: 307 VDDVLANYAGGRLIFNLGHGIQPNTPIAHVERMIARVRAYK 347
>gi|255534183|ref|YP_003094554.1| Uroporphyrinogen III decarboxylase [Flavobacteriaceae bacterium
3519-10]
gi|255340379|gb|ACU06492.1| Uroporphyrinogen III decarboxylase [Flavobacteriaceae bacterium
3519-10]
Length = 342
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 112/339 (33%), Positives = 186/339 (54%), Gaps = 6/339 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGR+LPE+R +R ++ +F C TPE E+T+ PI
Sbjct: 3 KNDLYLKALRGETVERPPVWMMRQAGRFLPEFRALRDQY-DFFTRCQTPELAAEITMMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY DAAILFSDILV+ A+G N EN GP ++ + + + L +
Sbjct: 62 RRYPLDAAILFSDILVVPQAMGINFEMKENLGPWLETPIRTLAQVQEVEVPNVNDTLGYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I + KL N+I LIGF G+PWT+ Y + G K + F ++N A + LL
Sbjct: 122 FDAIELTLHKLDNNIPLIGFAGSPWTILCYCVEGKGSKTFDVAKKFCFENPEAAHLLLQK 181
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D + YL ++ GV +Q+FD+ G L ++++ ++ + +I+ A+ +
Sbjct: 182 ITDTTIAYLKRKVEKGVSAVQVFDSWGGMLSPYDYQEFSWPYINQIVEALSEL---THVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + L+ L+ S+A+G+DW++ A + + + +QGN DP RL + +
Sbjct: 239 VFGKGCWFALEEMT-LSKSSALGVDWTIRPEIARKLVGENMTLQGNFDPSRLYSSPETIT 297
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ +++ G +I NLGHGI P + +N ++ V
Sbjct: 298 RMVHEMINRFGKDKYIVNLGHGILPNIPLENAEAFIRAV 336
>gi|153208663|ref|ZP_01946915.1| uroporphyrinogen decarboxylase [Coxiella burnetii 'MSU Goat Q177']
gi|165919774|ref|ZP_02219517.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 334]
gi|212218110|ref|YP_002304897.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuK_Q154]
gi|226696371|sp|B6J5G8|DCUP_COXB1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120575849|gb|EAX32473.1| uroporphyrinogen decarboxylase [Coxiella burnetii 'MSU Goat Q177']
gi|165916857|gb|EDR35461.1| uroporphyrinogen decarboxylase [Coxiella burnetii RSA 334]
gi|212012372|gb|ACJ19752.1| uroporphyrinogen decarboxylase [Coxiella burnetii CbuK_Q154]
Length = 361
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 128/350 (36%), Positives = 188/350 (53%), Gaps = 11/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + + L ++ P+W+MRQAGRYLPEYRQ+R+K NF+ C TPE E TLQP+
Sbjct: 5 KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN--PNIDLFLNYL 120
RR+ DAAI+FSDIL I DA+G ++ GP + +P+ + + P ++ L+YL
Sbjct: 65 RRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYL 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F +I + K L + + LIGF G+PWT+A YM G K R YQ F+ L
Sbjct: 125 ---FDAIRLAVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTL 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L L+ ++ YL AQI AG DV+ +FDT G L + ++ + +I + V R+
Sbjct: 182 LQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGR 241
Query: 240 -AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I F K G L++ + +A+GLDW+ + A + +QGNLDP L+
Sbjct: 242 KIPLIFFTKNGGQWLESIAN-SGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSN 300
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + IL G G +FNLGHGI P +NV LV+ V++ I
Sbjct: 301 PESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSI 350
>gi|416892|sp|P32362|DCUP_RAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|5524747|emb|CAB50784.1| uroporphyrinogen decarboxylase [Rattus norvegicus]
Length = 364
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 121/349 (34%), Positives = 180/349 (51%), Gaps = 9/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTL+P+
Sbjct: 12 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLEPV 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ AL V V +GP +P+ + + + L
Sbjct: 71 RRFPLDAAIIFSDILVVPQALAMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG K Q + + YQ A + LL
Sbjct: 131 VFQAITLTRQQLAGRVPLIGFAGAPWTLMTYMVEGGSFKTMAQAKRWLYQKPVASHKLLG 190
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
L+ YLI Q+ AG +Q+F++HAG LG F +A + + V+ A
Sbjct: 191 ILTHALVPYLIGQVAAGAQALQLFESHAGHLGSELFSKFALPYIRDVAKRVKAGLQKAGL 250
Query: 241 ---KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QG LDP L
Sbjct: 251 TRMPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKAREPVGKTVTLQGELDPCALYA 309
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ G +I NLGHG+ P +DP++V + V
Sbjct: 310 SEEEIGRLVQQMLNDFGPQRYIANLGHGLYPDMDPEHVGAFLDAVHKHS 358
>gi|258565903|ref|XP_002583696.1| uroporphyrinogen decarboxylase [Uncinocarpus reesii 1704]
gi|237907397|gb|EEP81798.1| uroporphyrinogen decarboxylase [Uncinocarpus reesii 1704]
Length = 365
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 121/353 (34%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LTLQPI
Sbjct: 9 KNDLLLRAAKGERVERPPIWIMRQAGRYLPEYHEAK-GSRDFFECCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V ++ +GP +P+ + + + ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPEPLQSPDDGQYEKVMAKEVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 AELDYVYKAITLTRQKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWLYKYPEAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + I + + ++
Sbjct: 188 KALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIATNLPKRT 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
Y A FAKGA Y L + + + N +GLDW + A + +QGN DP
Sbjct: 248 SELGYEPAPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQAARIANGRVTLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G +I NLGHG+TP VDP+ + + V
Sbjct: 307 GCLYGSKEAITAVVENMVAGFWGGKQRWIVNLGHGVTPFVDPEKLKFFFQEVH 359
>gi|325335712|gb|ADZ11986.1| Uroporphyrinogen-III decarboxylase [Riemerella anatipestifer RA-GD]
Length = 346
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 188/343 (54%), Gaps = 8/343 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL
Sbjct: 5 MMIKNDLYLKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITL 63
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
PI+R+ DAAILFSDILV+ A+G + + E+ GP ++ PI T+E D+
Sbjct: 64 MPIKRFPLDAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVN-ER 122
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A +
Sbjct: 123 LSYVFDSIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHL 182
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P
Sbjct: 183 LLQKITDTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PL 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
+ F KG + L+ L+ ++A+G+DW++ A +QGN DP RL
Sbjct: 240 THVVVFGKGCWFALEEMT-LSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTP 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 299 ETIRKMVDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 341
>gi|126657440|ref|ZP_01728596.1| uroporphyrinogen decarboxylase [Cyanothece sp. CCY0110]
gi|126621144|gb|EAZ91857.1| uroporphyrinogen decarboxylase [Cyanothece sp. CCY0110]
Length = 354
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 108/348 (31%), Positives = 185/348 (53%), Gaps = 10/348 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F + P+ +E+
Sbjct: 1 MTGANDTPYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLREKYPSFRERSENPDLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNP-NIDL 115
+LQP R + D I+FSDIL +G VE++GP +D PI T+E + L P + +
Sbjct: 61 SLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEE 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L ++ I QS LR+++ N T++GF G+PWT+A+Y I G K++ + A+
Sbjct: 121 SLPFIKTILQS---LRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPE 177
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L ++D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+
Sbjct: 178 ILHSFLSKIADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKE 237
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ I + G+ +L+ + + + + +DW+V ++ A L K+ VQGN+DP L
Sbjct: 238 THPDTPLILYISGSAGVLERMGQ-SGVDIVSVDWTVDMAEARQRLGKDMKVQGNIDPGVL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + G G I NLGHG+ NV +T +
Sbjct: 297 FGSQDFIKARILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAK 344
>gi|57168141|ref|ZP_00367280.1| uroporphyrinogen decarboxylase [Campylobacter coli RM2228]
gi|57020515|gb|EAL57184.1| uroporphyrinogen decarboxylase [Campylobacter coli RM2228]
Length = 340
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R++ +FL +C + E++LQP+
Sbjct: 3 FIDACFKKPTPYTPVWMMRQAGRYLPEYMKVRQEAGDFLSLCKDYKRASEVSLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ +G N+RF + EGP + L + L ++ ++
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFQTSISTLEDLNKLDDQNAYKKLNYVYDAL 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R+KLP LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V
Sbjct: 123 KLTREKLPLDKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHEILNKLTQV 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG + +QIFD+ A L +F +++ + + I ++ KYP+ I F K
Sbjct: 183 LKSYLEEQIKAGANAVQIFDSWASALECDKFFDFSFKYMLEISDFIKNKYPHIPVILFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS PL A +L + +QGN++P RL + + GV
Sbjct: 243 GISGYLDKI--DGNFDVFGVDWSTPLDLARDKLSHQYTLQGNMEPCRLY-DKKAIKQGVE 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+++ + IFNLGHGI P + +N ++ V+
Sbjct: 300 NILEIMQNKAHIFNLGHGILPDIPVENAKYFIQLVQESS 338
>gi|88811515|ref|ZP_01126770.1| uroporphyrinogen decarboxylase [Nitrococcus mobilis Nb-231]
gi|88791404|gb|EAR22516.1| uroporphyrinogen decarboxylase [Nitrococcus mobilis Nb-231]
Length = 337
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 125/328 (38%), Positives = 189/328 (57%), Gaps = 7/328 (2%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W+MRQAGRYLPEYRQ+R + +F+ +C PE ++TLQP+ RY DAAILFSDIL + D
Sbjct: 2 WIMRQAGRYLPEYRQVRAQAGSFMTLCRNPELACKVTLQPLERYPLDAAILFSDILTVPD 61
Query: 83 ALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
A+G + F E EGPR + P+ + + D+ + L + +I ++R +L + LI
Sbjct: 62 AMGLGLYFEEGEGPRFERPVRSLRAIADLSSPDIA-SELRYVTDAIGLIRHELAGRVPLI 120
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWT+A+YM+ GG + + + Y++ +A + LL+ ++ A+YL AQ+ AG
Sbjct: 121 GFSGSPWTLATYMVEGGSSRTFHRIKTLLYEHPQALHQLLEKVAQAVADYLNAQVEAGAQ 180
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVR--RKYPNAKFISFAKGAGYMLKNYRRL 259
+ IFDT G L + ++ V R++ A+R I F KG G L+ +
Sbjct: 181 ALMIFDTWGGVLAHEAYLEFSLEPVRRVLEALRLNTSEGRIPVIVFTKGGGLWLEALAGV 240
Query: 260 TDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
+NAIGLDWSV ++ A + + +QGNLDP L V+ V +L+ G P
Sbjct: 241 -GANAIGLDWSVDIAAARQRVGERVALQGNLDPCVLYAAPAVIRREVQRVLEAYGPHPGH 299
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+FNLGHGI P+VDP +V +++ V
Sbjct: 300 VFNLGHGIHPEVDPDHVSAMIEAVHEFS 327
>gi|305431710|ref|ZP_07400879.1| uroporphyrinogen decarboxylase [Campylobacter coli JV20]
gi|304445305|gb|EFM37949.1| uroporphyrinogen decarboxylase [Campylobacter coli JV20]
Length = 340
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 185/339 (54%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R++ +FL +C + E++LQP+
Sbjct: 3 FIDACFKKPTPYTPVWMMRQAGRYLPEYMKVRQEAGDFLSLCKDYKRASEVSLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ +G N+RF + EGP + L + L ++ ++
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFQTPISTLEDLNKLDDKNAYKKLNYVYDAL 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R+KLP LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+ V
Sbjct: 123 KLTREKLPLDKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHEILNKLTQV 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG + +QIFD+ A L +F +++ + + I ++ KYP+ I F K
Sbjct: 183 LKSYLEEQIKAGANAVQIFDSWASALECDKFFDFSFKYMLEISDFIKNKYPHIPVILFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS PL A +L + +QGN++P RL + + GV
Sbjct: 243 GISGYLDKI--DGNFDVFGVDWSTPLDLARDKLSHQYTLQGNMEPCRLY-DKKAIKQGVE 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+++ + IFNLGHGI P + +N ++ V+
Sbjct: 300 NILEIMQNKAHIFNLGHGILPDIPVENAKYFIQLVQESS 338
>gi|313206848|ref|YP_004046025.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer DSM 15868]
gi|312446164|gb|ADQ82519.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer DSM 15868]
Length = 342
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 188/343 (54%), Gaps = 8/343 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL
Sbjct: 1 MMIKNDLYLKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
PI+R+ DAAILFSDILV+ A+G + + E+ GP ++ PI T+E D+
Sbjct: 60 MPIKRFPLDAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVN-ER 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A +
Sbjct: 119 LSYVFDSIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHL 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P
Sbjct: 179 LLQKITDTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PL 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
+ F KG + L+ L+ ++A+G+DW++ A +QGN DP RL
Sbjct: 236 THVVVFGKGCWFALEEMT-LSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTP 294
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 295 ETIRKMVDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 337
>gi|121603278|ref|YP_980607.1| uroporphyrinogen decarboxylase [Polaromonas naphthalenivorans CJ2]
gi|171769337|sp|A1VJ58|DCUP_POLNA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|120592247|gb|ABM35686.1| uroporphyrinogen decarboxylase [Polaromonas naphthalenivorans CJ2]
Length = 369
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 186/360 (51%), Gaps = 22/360 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + P+WLMRQAGRYLPEY+ R K +F+ + +Y E+TLQP+
Sbjct: 6 QNDTFLRACLRQATDHTPVWLMRQAGRYLPEYKATRAKAGSFMGLATNTDYATEVTLQPL 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D +N L
Sbjct: 66 ERYPLDAAILFSDILTVPDAMGLGLSFALGEGPRFATPVRDEAAVNKLEVPD--MNKLRY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + YQ + +L
Sbjct: 124 VFDAVTSIRKALGGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTMLYQRPDLMHKMLA 183
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-- 240
+D A YL AQI AG + IFD+ G L + F ++ R++S ++R++
Sbjct: 184 INADAVALYLNAQIEAGAQAVMIFDSWGGVLADAAFHTFSLAYTARVLSQLKREHKGVTI 243
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQGNLDPMRLV 295
+ F KG G L++ ++L D +GLDW+V L+ A L E +QGNLDP L
Sbjct: 244 PRLVFTKGGGQWLESMKQL-DCEVLGLDWTVNLAKARALVGENGPNAKALQGNLDPNVLF 302
Query: 296 VGNQVMIDGVNAILDVLGSGPF----------IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A+L+ G+ P IFNLGHGI+ P++V LV+ V +
Sbjct: 303 ANPAQIEAEVAAVLNSFGA-PHTDLTQTGPTQIFNLGHGISQHTPPESVEVLVRAVHAHS 361
>gi|283956638|ref|ZP_06374117.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
1336]
gi|283791887|gb|EFC30677.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
1336]
Length = 340
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 121/340 (35%), Positives = 185/340 (54%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+ F + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLHFEKGEGPVFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + +QIFD+ A L +F ++ + I + ++ KY N I F
Sbjct: 182 VLKLYLEEQIKAGANAVQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYSNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|205356262|ref|ZP_03223028.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345867|gb|EDZ32504.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 340
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 186/340 (54%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY + RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDACFKKPTPYTPIWMMRQAGRYLPEYMEARKQAGDFLSLCKDYKKASEVSLQPIDTLD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMNLRFEKGEGPVFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL + LIGFCG+PWT+A+YMI G K++ + + YQN + +L+ L+
Sbjct: 122 LKLTREKLSQNKALIGFCGSPWTIATYMIEGSGSKNYAKCKKMLYQNPELLHKILNKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + IQIFD+ A L +F ++ + I + ++ KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAIQIFDSWASALEYDKFFEFSFNYMLEISNFIKSKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDRI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + IFNLGHGI P + +N +K V+
Sbjct: 299 GKILKTMQNKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|256078081|ref|XP_002575326.1| uroporphyrinogen decarboxylase [Schistosoma mansoni]
gi|238660562|emb|CAZ31559.1| uroporphyrinogen decarboxylase [Schistosoma mansoni]
Length = 364
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 124/353 (35%), Positives = 191/353 (54%), Gaps = 15/353 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ I+ +G ++ P+W+MRQAGRYLPE+R++R+K +F ++C TPE +TLQ
Sbjct: 7 TLKNDNIIRAAKGEAVSRLPVWIMRQAGRYLPEFRELREK-HDFFEICRTPELACAVTLQ 65
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNY 119
PI R++ DAAI+FSDILVI ALG V+ GP+ +P+ + ++ LN +D+
Sbjct: 66 PINRFDLDAAIIFSDILVIPQALGMEVKMQPGVGPKFTEPLNSVNDLDRLNAQVDVR-KE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +++SI++ R +L + LIGF GAPWT+ SYMI GG + + + + Y ++
Sbjct: 125 LNYVYESITLTRYRLNGRVPLIGFAGAPWTLMSYMIEGGSSNTYSKAKKWLYTEPQSSQR 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+ E+LI Q+ +G ++Q+F++HAG L + F + + +I + VR + N
Sbjct: 185 LLSLLTQKVVEHLIQQVLSGAQLLQVFESHAGFLSPYLFNTFCLPYLKQISNEVRSRLLN 244
Query: 240 ---------AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNL 289
I FAK Y L + D + I LDW++ A + +QGNL
Sbjct: 245 EYRIPRDSIPPLIVFAKDGHYALTELSK-ADYDVISLDWTISPRLARNTVGSHITLQGNL 303
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L + V +++ G +I NLGHGI P VDP V V V
Sbjct: 304 DPCALYSNENQISSLVKEMINDFGIHRYIVNLGHGIYPDVDPDKVNKFVDLVH 356
>gi|255084091|ref|XP_002508620.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226523897|gb|ACO69878.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 390
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 102/340 (30%), Positives = 173/340 (50%), Gaps = 4/340 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ +++ +G ++ PP W+MRQAGRY+ EYR + K +F + + VE+TLQP
Sbjct: 50 KEPRLVRAAKGLPVDRPPAWMMRQAGRYMKEYRDLAVKVPSFRERSENTDLIVEITLQPF 109
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R + D ILFSDIL A+G + +GP +D PI + L DL L+ L
Sbjct: 110 RAFKPDGVILFSDILTPLPAIGIPFEIDDYKGPILDQPIR--DAEGLKMMHDLDLDMLPF 167
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ LRK++ + ++GF GAPWT+A+Y++ GG + + +L
Sbjct: 168 VGEALTTLRKEVGDEAAVLGFVGAPWTLATYIVEGGSSSTYKTIKSMTMTEPEVLKSILS 227
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D +Y+ QI AG +QIFD+ G L H +E ++ + +++ VR +P
Sbjct: 228 KVADAVGDYVGYQIDAGAQCVQIFDSWGGQLPPHMWEQWSKPYIQQVVDKVRATHPGTPL 287
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ T + IGLDW++ + + VQGN+DP L + +
Sbjct: 288 TLYANGSGGLLERMA-TTGVDCIGLDWTIDMEDGRRRVGDKAVQGNVDPAVLFAPPEAIE 346
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V ++ G I NLGHG+ ++V T +
Sbjct: 347 KAVKDVVKKAGPTGHILNLGHGVLVGTPEESVKLFFDTAK 386
>gi|103488320|ref|YP_617881.1| uroporphyrinogen decarboxylase [Sphingopyxis alaskensis RB2256]
gi|123078055|sp|Q1GP74|DCUP_SPHAL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|98978397|gb|ABF54548.1| uroporphyrinogen decarboxylase [Sphingopyxis alaskensis RB2256]
Length = 342
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 143/344 (41%), Positives = 201/344 (58%), Gaps = 4/344 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K+L L+G P+WLMRQAGRYLPEYR +R+ FL++CY PE E+TL
Sbjct: 1 MKASPKKLLATLRGARHERTPLWLMRQAGRYLPEYRALRESKGGFLELCYDPEAAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FD AILFSDILVI ALG+++ F EGPR+ P +++ L
Sbjct: 61 QPIRRFGFDGAILFSDILVIPHALGQHLWFEAGEGPRLAPPLVDGALA---SLEAAPQRL 117
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P++ +++ + LP T +GF G+PWTVA+YM++G KD R A+ + AF +
Sbjct: 118 DPVYATVARVAASLPPETTFLGFAGSPWTVATYMVAGRGSKDQAAARRMAFADPAAFGAI 177
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D ++D++ YL QI GVD +Q+FD+ AG L +FE + I+ ++ +P+
Sbjct: 178 IDAIADLTVTYLSGQIEQGVDAVQLFDSWAGSLSPAQFEQWVIAPNAGIVRRLKALHPDT 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F KGAG L+ Y T +AIGLD +V ++A L + PVQGNLDP+ LV G
Sbjct: 238 PVIGFPKGAGGKLRAYAEETGVDAIGLDETVDPTWADAALPSQLPVQGNLDPLALVAGGA 297
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ IL S P IFNLGHGI P +V L+K VR
Sbjct: 298 ALDAAIDRILAAFPSRPHIFNLGHGIVPDTPVAHVEHLIKRVRG 341
>gi|145229089|ref|XP_001388853.1| uroporphyrinogen decarboxylase [Aspergillus niger CBS 513.88]
gi|134054952|emb|CAK36961.1| unnamed protein product [Aspergillus niger]
Length = 363
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 193/354 (54%), Gaps = 18/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LT+QPI
Sbjct: 9 KNDLLLRAARGEKVQRPPIWVMRQAGRYLPEYHEAKAG-RDFFECCRDPEVASTLTIQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + ++ ++D+
Sbjct: 68 DRYAGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLQSPDDGQYEKVMQKDVDVK 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 128 -SELDYVYKAITLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKKWIYKYPKE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + +K
Sbjct: 187 SQALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPAAFKSFSLPYLRHISANLPKK 246
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA + L++ + N +GLDW + A + +QGN D
Sbjct: 247 LKEMGLEPVPMTVFAKGAWFGLEDLCE-SGYNVVGLDWLHDPAEARRIANGRVTIQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L G + + + V ++ G +I NLGHG+TP V+P ++ + +
Sbjct: 306 PGVLYGGREAITEAVETMVRGFEKGKQGWIANLGHGVTPFVNPDDLKFFFEEIH 359
>gi|34496577|ref|NP_900792.1| uroporphyrinogen decarboxylase [Chromobacterium violaceum ATCC
12472]
gi|34102431|gb|AAQ58797.1| uroporphyrinogen decarboxylase [Chromobacterium violaceum ATCC
12472]
Length = 331
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 114/324 (35%), Positives = 172/324 (53%), Gaps = 8/324 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR R + +F+ +C +P+Y E+TLQP+ R+ DAAILFSDIL + DA
Sbjct: 1 MMRQAGRYLPEYRATRARAGSFMGLCTSPDYATEVTLQPLDRFPLDAAILFSDILTVPDA 60
Query: 84 LGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + F E EGP+ P+ + D + L +F +++ +RK L + LIG
Sbjct: 61 MGLGLYFAEGEGPKFQRPLRDEAAIRALAPAD--MGKLQYVFDAVASIRKALDGRVPLIG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F G+P+T+A YM+ GG D + Y + +L+ + YL AQI AG
Sbjct: 119 FSGSPFTLACYMVEGGGSDDFRHVKAMLYSRPELLHHILEANTQSVIAYLNAQIDAGAQA 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLT 260
+QIFDT G L + ++ + RI++ ++R+ I F KG G L++ +
Sbjct: 179 VQIFDTWGGALSHAAYREFSLAYMQRIVAGLKREADGRRVPVIVFTKGGGQWLEDIAAI- 237
Query: 261 DSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFI 318
++ +GLDW+ + A + + +QGN DP L + V IL G G +
Sbjct: 238 GADCVGLDWTTDIGQARARVGAKVALQGNFDPNALFAEPAAIEREVERILQSYGQGSGHV 297
Query: 319 FNLGHGITPQVDPKNVLDLVKTVR 342
FNLGHGI+ DP + LV+ V
Sbjct: 298 FNLGHGISQFADPAHAGALVEAVH 321
>gi|195475074|ref|XP_002089810.1| updo [Drosophila yakuba]
gi|194175911|gb|EDW89522.1| updo [Drosophila yakuba]
Length = 356
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KLHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIVVPEDLKRLTPDGALSRLSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + ++ L+
Sbjct: 130 GDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
L+D +YL Q+ AG ++Q+F++ A L + +F + + RI + ++ P
Sbjct: 190 LTDAIVDYLEMQVKAGAQMLQVFESSAEHLSKEQFLQWGVPYLKRIRDELVDRLTKKAIP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 250 VVPMTLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPLEARTLVGPNITLQGNLDPQDMYRD 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 309 PDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVEAVH 353
>gi|171769243|sp|A1TVM0|DCUP_ACIAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 376
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 116/360 (32%), Positives = 180/360 (50%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 7 QNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + + L +
Sbjct: 67 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFARVVRDEAAVAELAVP-DMEKLRYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 126 FDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRILAI 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 186 NADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDV 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG L++ + L D +GLDW+ L+ A L +QGN+DP L
Sbjct: 246 PRIVFTKGGALWLEDMKGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVL 304
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 305 FAPPEAIAAQARAVLDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 364
>gi|239813737|ref|YP_002942647.1| uroporphyrinogen decarboxylase [Variovorax paradoxus S110]
gi|259645160|sp|C5CLI6|DCUP_VARPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239800314|gb|ACS17381.1| uroporphyrinogen decarboxylase [Variovorax paradoxus S110]
Length = 370
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 123/361 (34%), Positives = 178/361 (49%), Gaps = 22/361 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + P+WLMRQAGRYLPEY R + +F+ + +Y E+TLQP+
Sbjct: 7 QNDTFLRACWRQATDHTPVWLMRQAGRYLPEYVATRARAGSFMGLATNTDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D + L
Sbjct: 67 ERYPLDAAILFSDILTVPDAMGLGLSFEAGEGPRFARPVQGEAAVAALEVPD--MAKLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + Y + LL
Sbjct: 125 VFDAVASIRKALDGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYSRPDLMHRLLA 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 185 VNADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLAGLQRNGADGQP 244
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG------PVQGNLDPMR 293
I F KG G L+ R L D +G+DW+V LS A L EG +QGN+DP
Sbjct: 245 VPRIVFTKGGGLWLEAMREL-DCEVLGVDWTVNLSAARRLVGEGTDAKAKALQGNIDPNV 303
Query: 294 LVVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + V +L G IFNLGHGI+ P +V LV+ V ++
Sbjct: 304 LFAPPAQIEAEVAKVLQAFGQPHADAAAKGPTHIFNLGHGISQFTPPDHVAALVQAVHAQ 363
Query: 345 K 345
Sbjct: 364 S 364
>gi|17231401|ref|NP_487949.1| uroporphyrinogen decarboxylase [Nostoc sp. PCC 7120]
gi|23813944|sp|Q8YQC4|DCUP_ANASP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|17133043|dbj|BAB75608.1| uroporphyrinogen decarboxylase [Nostoc sp. PCC 7120]
Length = 350
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 8/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQ
Sbjct: 4 TSTAPHLLRAARGEIVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLN 118
P + + D ILFSDI+ LG + E +GP + PI TQ +I L P + L
Sbjct: 64 PWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ I Q+ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + +
Sbjct: 124 FIKTILQA---LRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L+D A Y QI +G V+Q+FD+ AG L +++ +A R+ +++ +P
Sbjct: 181 QLLSKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I G+ +L+ + + ++ + +DW+V ++ A L K+ VQGNLDP L
Sbjct: 241 DTPLILLVSGSAGVLERMGQ-SGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYAS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
Q + D + + G+ I NLGHG+ P +NV +T +
Sbjct: 300 KQFIRDRIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAK 344
>gi|307943438|ref|ZP_07658782.1| uroporphyrinogen decarboxylase [Roseibium sp. TrichSKD4]
gi|307773068|gb|EFO32285.1| uroporphyrinogen decarboxylase [Roseibium sp. TrichSKD4]
Length = 334
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 159/334 (47%), Positives = 219/334 (65%), Gaps = 2/334 (0%)
Query: 9 LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNF 68
+ VL G + PPPIW+MRQAGRYLPEYR++RKK NFL+ CY+P+ E+TLQPIRRY F
Sbjct: 1 MRVLAGEKLWPPPIWMMRQAGRYLPEYREVRKKAANFLEFCYSPDLATEVTLQPIRRYGF 60
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
DA+ILFSDI V+ DA+G VRF E GP ++P+ T+ + L + + +L P+ +++S
Sbjct: 61 DASILFSDIFVVPDAIGYPVRFEERRGPVLEPLCTELVDRL--DQERAEKHLEPVIETVS 118
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
LR +LP TL+GFCGAPWTVA Y ++G +D RV AY++ +D L S
Sbjct: 119 RLRAELPPETTLLGFCGAPWTVACYSVAGHTTQDQVAARVGAYRDPELMARFIDQLVTAS 178
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
YL+ Q+ AG D +QIFDT AG L + FE ++ + I+ V+ + PNAK I F K
Sbjct: 179 IRYLVRQLDAGADAVQIFDTWAGVLDDAGFERWSIQPTRAIVDGVKAQRPNAKIIGFPKA 238
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
+ + Y T +A+G DW+ P ALE+QK+ P+QGNLDPMRLV G + + +G++ I
Sbjct: 239 SSARMATYIARTGVDAVGFDWTAPDHLALEIQKKVPIQGNLDPMRLVAGGKALDEGIDHI 298
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L GPFIFNLGHG+TP DP+NV +V+ V+
Sbjct: 299 LQTFNEGPFIFNLGHGVTPDADPENVARMVERVK 332
>gi|126642407|ref|YP_001085391.1| uroporphyrinogen decarboxylase [Acinetobacter baumannii ATCC 17978]
Length = 333
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 128/329 (38%), Positives = 175/329 (53%), Gaps = 8/329 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K +FL +C E+ E+TLQP+RRY+ DAAILFSDIL I DA
Sbjct: 1 MMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
LG + F EGP+ E + N L + ++S +R L + LIGF
Sbjct: 61 LGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGF 120
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G+PWT+A+YM+ GG K+ + Y + LLD L+D +YL AQI AG I
Sbjct: 121 SGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAI 180
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTD 261
QIFD+ G L E+ ++ + +II+ ++R+ I F KG G L+ T
Sbjct: 181 QIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMI-TTG 239
Query: 262 SNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL----GSGP 316
++A+GLDW+ PL+ A + +QGNLDP L + V A+LD
Sbjct: 240 ADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTG 299
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ NLGHGIT VDP V TV
Sbjct: 300 YVANLGHGITQWVDPAQPKIFVDTVHEYS 328
>gi|14334768|gb|AAK59562.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
Length = 394
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQ
Sbjct: 50 ATSEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQ 109
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP +P + + +
Sbjct: 110 PWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREF-VPEESV 168
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ + + L
Sbjct: 169 PYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHAL 228
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +PN
Sbjct: 229 LQKFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNL 288
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ R T + + LDW+V ++ L ++ VQGN+DP L +
Sbjct: 289 PLILYASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKE 347
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + G I NLGHGI +NV + +
Sbjct: 348 FITSRIHDTVKKAGRDKHILNLGHGIKVGTPVENVAHFFEVAQE 391
>gi|172037879|ref|YP_001804380.1| uroporphyrinogen decarboxylase [Cyanothece sp. ATCC 51142]
gi|226696373|sp|B1WVY1|DCUP_CYAA5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171699333|gb|ACB52314.1| uroporphyrinogen decarboxylase [Cyanothece sp. ATCC 51142]
Length = 354
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 107/348 (30%), Positives = 184/348 (52%), Gaps = 10/348 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +L +G +++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E+
Sbjct: 1 MTGANDTPYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNP-NIDL 115
+LQP R + D I+FSDIL +G VE++GP +D PI T+E + L P + +
Sbjct: 61 SLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEE 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L ++ I QS LR+++ N T++GF G+PWT+A+Y I G K++ + A+
Sbjct: 121 SLPFIKTILQS---LRQEVGNQSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKSMAFSQPE 177
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L ++D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+
Sbjct: 178 ILHSFLSKIADAIAIYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKE 237
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+P+ I + G+ +L+ + + + + +DW+V ++ A L ++ VQGN+DP L
Sbjct: 238 THPDTPLILYISGSAGVLERMGQ-SGVDIVSVDWTVDMAEARQRLGRDMKVQGNIDPGVL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + G G I NLGHG+ NV +T +
Sbjct: 297 FGSQDFIKARILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAK 344
>gi|198459979|ref|XP_001361569.2| GA14829 [Drosophila pseudoobscura pseudoobscura]
gi|198136866|gb|EAL26148.2| GA14829 [Drosophila pseudoobscura pseudoobscura]
Length = 356
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 123/346 (35%), Positives = 186/346 (53%), Gaps = 10/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLK-RLTPDGALSRLTY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L+
Sbjct: 129 VGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+D +YL Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 189 LLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEDFLLWAVPYLRRIRDELVDRLTKKAV 248
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
P FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 249 PLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMYR 307
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 308 DADELRALTTEMVHKFGKSRYIANLGHGITPQTPITSMDVLVEAVH 353
>gi|300774728|ref|ZP_07084591.1| uroporphyrinogen decarboxylase [Chryseobacterium gleum ATCC 35910]
gi|300506543|gb|EFK37678.1| uroporphyrinogen decarboxylase [Chryseobacterium gleum ATCC 35910]
Length = 343
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 121/340 (35%), Positives = 191/340 (56%), Gaps = 8/340 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGRYLPE+ +R ++ +F C TPE E+TLQPI
Sbjct: 3 KNDLYLKALRGETVERPPVWMMRQAGRYLPEFIALRDQY-DFFTRCQTPELAAEITLQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDILV+ A+G + + E+ GP +D PI T E D+ + L
Sbjct: 62 RRFPLDAAILFSDILVVPQAMGIDFKMKESVGPWLDTPIRTMEQVQNIETPDVN-DTLGY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +I + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL
Sbjct: 121 VFDAIELTLQKLDNDIPLIGFAGSPWTILCYCVEGKGSKAFDIAKSFCFQQPEAAHLLLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ GV +Q+FD+ G L +++ ++ + + +II A+ P
Sbjct: 181 KITDTTIAYLKRKVEKGVSAVQVFDSWGGMLSPTDYQEFSWQYIDQIIEALS---PLTHV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
+ F KG + L++ ++ ++A+G+DW++ FA L +QGN DP RL + +
Sbjct: 238 VVFGKGCWFALEDMT-MSKASALGVDWTIKPEFARTLTNHTMTLQGNFDPARLHSTPETI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
VN +++ G +I NLGHGI P V +N ++ V
Sbjct: 297 KKMVNEMINRFGKDRYIANLGHGILPNVPVENAEAFIRAV 336
>gi|119189677|ref|XP_001245445.1| hypothetical protein CIMG_04886 [Coccidioides immitis RS]
Length = 365
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ +G + PPIW+MRQAGRYLPEY + + ++F + C PE LTLQPI
Sbjct: 9 KNDLLLKAARGERVQRPPIWIMRQAGRYLPEYHEAK-GTRDFFECCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V VE +GP +P+ + + + ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 AELDYVYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYKYPEAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + I + + +K
Sbjct: 188 KALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIAANLPKKV 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
Y FAKGA Y L + + + N +GLDW + A + +QGN DP
Sbjct: 248 VELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHGITP V+P+++ + +
Sbjct: 307 GCLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDLKFFFQEIH 359
>gi|92118433|ref|YP_578162.1| uroporphyrinogen decarboxylase [Nitrobacter hamburgensis X14]
gi|122417215|sp|Q1QJ95|DCUP_NITHX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91801327|gb|ABE63702.1| uroporphyrinogen decarboxylase [Nitrobacter hamburgensis X14]
Length = 350
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 2/342 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LEVL G PPIW+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQPIRR
Sbjct: 8 KPFLEVLSGRRQAVPPIWMMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPIRR 67
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAI+FSDILVI ALGR+VRF EGPR+DP+ T ++ + + + L P+F+
Sbjct: 68 FAFDAAIIFSDILVIPYALGRSVRFEVGEGPRLDPLDTPDMAATL-SREADMTKLEPVFE 126
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R++L + LIGFCGAPWTVA+YM++G D R+ AY++ AF ++D L
Sbjct: 127 ALRRVRRELDSKTALIGFCGAPWTVATYMVAGRGTPDQAPARMMAYRHPEAFAKIIDVLV 186
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ S YL+ Q+ AG DV+QIFDT AG L EF ++ RI+ VR+ P+AK I F
Sbjct: 187 ENSVRYLLGQLKAGADVLQIFDTWAGVLPPREFARWSIEPTRRIVEGVRKIVPDAKIIGF 246
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG +L +Y T +A+ +DW+ S E +Q VQGNLDP+ L+ G +
Sbjct: 247 PRGAGALLPSYIEATGVDAVSIDWAAEPSLVREKVQSRVAVQGNLDPLALIAGGAALDRA 306
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +L G IFNLGHGI P+ +V +++ VR +
Sbjct: 307 VDDVLANFAGGRLIFNLGHGIQPETPIPHVEQMIRRVRGSGL 348
>gi|303322913|ref|XP_003071448.1| uroporphyrinogen decarboxylase, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240111150|gb|EER29303.1| uroporphyrinogen decarboxylase, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 365
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ +G + PPIW+MRQAGRYLPEY + + ++F + C PE LTLQPI
Sbjct: 9 KNDLLLKAARGEKVQRPPIWIMRQAGRYLPEYHEAK-GTRDFFECCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V VE +GP +P+ + + + ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 AELDYVYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYKYPEAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +A + I + + ++
Sbjct: 188 KALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIAANLPKRV 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
Y FAKGA Y L + + + N +GLDW + A + +QGN DP
Sbjct: 248 VELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHGITP V+P+++ + +
Sbjct: 307 GCLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDLKFFFQEIH 359
>gi|157738012|ref|YP_001490696.1| uroporphyrinogen decarboxylase [Arcobacter butzleri RM4018]
gi|172045653|sp|A8EVQ3|DCUP_ARCB4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157699866|gb|ABV68026.1| uroporphyrinogen decarboxylase [Arcobacter butzleri RM4018]
Length = 346
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 122/337 (36%), Positives = 190/337 (56%), Gaps = 3/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R K NFL++C+ PE E+T+QP+
Sbjct: 5 FVDACFRKETPYTPVWMMRQAGRYLPEYMEVRAKAGNFLNLCHNPELAAEVTIQPLDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ + +G + F++ EGP D PI T+ + N L ++++
Sbjct: 65 VDAAILFSDILVVPNEMGMKLDFLKGEGPVFDKPIKTEADLDALIGGEEAANKLTYVYET 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I IL+++LP LIGF GAPWT+A+YMI G K + + Y N + +L ++D
Sbjct: 125 IKILKQRLPQDKALIGFTGAPWTLATYMIEGQGTKTYNLCKKMMYSNPEFLHKILRRVTD 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y+ QI AGVDV+QIFD+ A + +++ ++ + + I ++ KYP+ I F
Sbjct: 185 VVKFYMEKQIEAGVDVVQIFDSWAAAIEPSKYDEFSWKYMVEIAEYLKEKYPHIPVIMFP 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG ++ + + G+DW P++ A E L ++ +QGN++P RL + V
Sbjct: 245 KGIAAFIERGLVYGNFDVFGVDWGTPMALAKEKLGEKYVLQGNMEPCRLY-SKEATTMCV 303
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I +++G IFNLGHGI P V +N + VK +
Sbjct: 304 EGIQNIMGGNGHIFNLGHGILPDVPVENAIHFVKECQ 340
>gi|15226690|ref|NP_181581.1| HEME2; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|6014937|sp|O22886|DCUP2_ARATH RecName: Full=Uroporphyrinogen decarboxylase 2, chloroplastic;
Short=UPD2; Short=URO-D2; Flags: Precursor
gi|2651307|gb|AAB87587.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|23297097|gb|AAN13092.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|330254743|gb|AEC09837.1| Uroporphyrinogen decarboxylase 2 [Arabidopsis thaliana]
Length = 394
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQ
Sbjct: 50 ATSEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQ 109
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP +P + + +
Sbjct: 110 PWKVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREF-VPEESV 168
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ + + L
Sbjct: 169 PYVGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHAL 228
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +PN
Sbjct: 229 LQKFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNL 288
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ R T + + LDW+V ++ L ++ VQGN+DP L +
Sbjct: 289 PLILYASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDIAVQGNVDPGVLFGSKE 347
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + G I NLGHGI +NV + +
Sbjct: 348 FITSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFEVAQE 391
>gi|158300799|ref|XP_320631.3| AGAP011895-PA [Anopheles gambiae str. PEST]
gi|157013335|gb|EAA00166.4| AGAP011895-PA [Anopheles gambiae str. PEST]
Length = 419
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 117/345 (33%), Positives = 187/345 (54%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G ++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 74 KNDNLLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRAK-HDFFTVCRTPELACEVTMQPL 132
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L N + L +
Sbjct: 133 RRFDLDASIIFSDILVIPQALGITVEMKPGVGPVLPEPLVGPADLDRLNQTGTIERLKYV 192
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I+++R+ L + L GF GAPWT+ YMI GG K + + + + A LLD
Sbjct: 193 GEAITMMRRMLEGKVPLFGFTGAPWTLMGYMIEGGGSKTMSKAKGWLADHPEASQKLLDI 252
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YP 238
L+D +YL+ Q+ AG ++Q+F++ A L + +F + + + RI + RK P
Sbjct: 253 LTDQVVDYLVMQVKAGAQMLQVFESSADHLSKEQFLSVSLPCLKRIRVDLLRKLADEGVP 312
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ FAKGA + L+ + T +GLDW++ A + +QGNLDP +
Sbjct: 313 AVPMVLFAKGAMHSLEEMAQ-TGYEVLGLDWTIDPEEARKRVGPNVTLQGNLDPQDMYKP 371
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V ++ G +I NLGHGITPQ +++ LV+ V
Sbjct: 372 PEELRELVLTMVRKFGKHRYIANLGHGITPQTPIESMSVLVQAVH 416
>gi|170077445|ref|YP_001734083.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7002]
gi|238058172|sp|B1XIF6|DCUP_SYNP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|169885114|gb|ACA98827.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7002]
Length = 350
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 106/348 (30%), Positives = 180/348 (51%), Gaps = 8/348 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E +L +G + P+W+MRQAGRY+ YR +R+K+ +F + P+ +E+
Sbjct: 1 MSESNNTPLLLRAARGEKVERTPVWMMRQAGRYMKIYRDLREKYPSFRERSENPDLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
+LQP + D I+FSDIL +G +E++GP + +PI TQ D
Sbjct: 61 SLQPWHAFQPDGVIMFSDILTPLPGMGIPFDIIESKGPIIENPIRTQAQVDAMTPFD--P 118
Query: 118 NYLLPIFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
LP ++I LR+++ N T++GF GAPWT+A+Y I G K++ + A+
Sbjct: 119 AESLPFIKTILGTLRQEVGNASTVLGFVGAPWTLAAYAIEGKSSKNYAIIKNMAFSEPAV 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L ++D A+Y+ QI G VIQ+FD+ AG L +++ +A R++ V+ K
Sbjct: 179 LHSFLGKIADAIADYVCYQIECGAQVIQMFDSWAGQLSPQDYDMFALPYQKRVVDKVKAK 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
YP+ I + G+ +L+ + + + + +DW+V ++ A L K+ VQGN+DP L
Sbjct: 239 YPDFPLILYISGSAGVLERMGK-SGVDIVSVDWTVDMADARQRLGKDMKVQGNIDPGVLF 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + G+ I NLGHG+ NV +T ++
Sbjct: 298 GSQDFIKARIIDTVRKAGNWGHILNLGHGVLVGTPEDNVRFFFETCKN 345
>gi|327402534|ref|YP_004343372.1| Uroporphyrinogen decarboxylase [Fluviicola taffensis DSM 16823]
gi|327318042|gb|AEA42534.1| Uroporphyrinogen decarboxylase [Fluviicola taffensis DSM 16823]
Length = 345
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 183/347 (52%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL +G I P+WLMRQAGR LPEYR +R+ F ++ TP E+T+
Sbjct: 1 MKLQNDLILRAAKGEDIERYPVWLMRQAGRILPEYRAVRESVSGFKELVETPALAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL-NY 119
QP+ DAAI+FSDILV+ +A+ + +E GP + E D + +
Sbjct: 61 QPVDILGVDAAIIFSDILVVPEAMNVPYQMIEKRGPWFEHTIRSEEEAKRLEFDFDIEDR 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++I + K+L + +IGF GAPWT+ YM+ G K + R Y N +
Sbjct: 121 LGYVLEAIKLTVKQLDGRVPVIGFAGAPWTILCYMVEGHGSKTFSEARKLLYTNPTLAHQ 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++DV+ YL AQ+ AG +IQ+FD+ AG LG ++ ++ + +I SA+ +
Sbjct: 181 LLQHVTDVTIAYLKAQVKAGASMIQVFDSWAGILGTEQYATFSLPYLSQIASAI----ED 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
F+KGA + +L D N IGLDW++ ++ + +QGNLDP L +
Sbjct: 237 VPVTLFSKGAITSIPALAKL-DCNTIGLDWNMDVAAMRALVGNSKTLQGNLDPCALYGSH 295
Query: 299 QVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
Q + +L+ G + I NLGHG+ P VDP+ V +KTV+S
Sbjct: 296 QSIELETIKMLNSFGNNQRHIVNLGHGVYPDVDPEKVKTFIKTVKSY 342
>gi|120613104|ref|YP_972782.1| uroporphyrinogen decarboxylase [Acidovorax citrulli AAC00-1]
gi|120591568|gb|ABM35008.1| uroporphyrinogen decarboxylase [Acidovorax citrulli AAC00-1]
Length = 379
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 116/360 (32%), Positives = 180/360 (50%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 10 QNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + + L +
Sbjct: 70 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFARVVRDEAAVAELAVP-DMEKLRYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 129 FDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGSGSDDYRLVKTLMYSRPDLMHRILAI 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 189 NADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDV 248
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG L++ + L D +GLDW+ L+ A L +QGN+DP L
Sbjct: 249 PRIVFTKGGALWLEDMKGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVL 307
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 308 FAPPEAIAAQARAVLDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 367
>gi|315023922|gb|EFT36924.1| uroporphyrinogen decarboxylase [Riemerella anatipestifer RA-YM]
Length = 341
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 117/340 (34%), Positives = 187/340 (55%), Gaps = 8/340 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+G + PP+W+MRQAGR+LPE+R +R K+ +F C TPE ++TL PI
Sbjct: 3 KNDLYLKALRGESVERPPVWMMRQAGRFLPEFRALRDKY-DFFTRCQTPELASDITLMPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDILV+ A+G + + E+ GP ++ PI T+E D+ L
Sbjct: 62 KRFPLDAAILFSDILVVPQAMGLDFQMKESVGPWLETPIRTKEQVEAIEIPDVN-ERLSY 120
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F SI + +KL N I LIGF G+PWT+ Y + G K + F +Q A + LL
Sbjct: 121 VFDSIELTLQKLDNEIPLIGFAGSPWTILCYCVEGKGSKAFDVAKSFCFQQPEAAHLLLQ 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL ++ GV +QIFD+ G L +++ ++ + + +I+ A+ P
Sbjct: 181 KITDTTIAYLKRKVEKGVSAVQIFDSWGGMLSPEDYQEFSWQYIQQIVEALS---PLTHV 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
+ F KG + L+ L+ ++A+G+DW++ A +QGN DP RL + +
Sbjct: 238 VVFGKGCWFALEEMT-LSKASALGVDWTITPELARTYTNHTMTLQGNFDPARLHSTPETI 296
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ ++ G +I NLGHGI P + +N V+ V
Sbjct: 297 RKMVDNMIRRFGKDRYIVNLGHGILPNIPVENAEAFVRAV 336
>gi|297569895|ref|YP_003691239.1| uroporphyrinogen decarboxylase [Desulfurivibrio alkaliphilus AHT2]
gi|296925810|gb|ADH86620.1| uroporphyrinogen decarboxylase [Desulfurivibrio alkaliphilus AHT2]
Length = 345
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 132/343 (38%), Positives = 193/343 (56%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G ++ P+W+MRQAGRYLPEY +R K+ FLDMC TPE E+T+QP+
Sbjct: 2 NTTFLQACRGEPVDYTPVWMMRQAGRYLPEYHTVRSKY-TFLDMCKTPEAAAEVTIQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLL 121
DAAILFSDILVI +A+G + F EN GP +P+ Q L+ P+ + L Y
Sbjct: 61 LIGVDAAILFSDILVIPEAMGAPLEFHENRGPVFPEPVRDQAAVDRLIVPDPEDKLGY-- 118
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +LRK+L N + LIGF GAP+T A+YMI GG K+ + Y + LL
Sbjct: 119 -VMAAIRLLRKELANKVPLIGFAGAPFTNATYMIEGGSSKNFFLTKKMMYTAPELYGRLL 177
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D +++ + YL AQ AG +QIFD+ AG L +F +A V RIISA++ +
Sbjct: 178 DKITESTILYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYVKRIISALKESGVDVP 237
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I FA +L+ + ++ +GLDW + L A + + +QGNLDP L++ +
Sbjct: 238 LIYFANNGATLLEQ-SKTVGADVLGLDWRINLDEAAKIVGPGIALQGNLDPCALLLPHDK 296
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V IL+ + IFNLGHGI P++ P+ +V V
Sbjct: 297 LEERVARILEQGKAADGHIFNLGHGILPEIPPEQAKFMVDAVH 339
>gi|326319144|ref|YP_004236816.1| uroporphyrinogen decarboxylase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375980|gb|ADX48249.1| uroporphyrinogen decarboxylase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 379
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 116/360 (32%), Positives = 180/360 (50%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 10 QNDTFLRACRRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR + E + + + L +
Sbjct: 70 ERFPLDAAILFSDILTVPDAMGLGLTFAEGEGPRFARVVRDEAAVAELAVP-DMEKLRYV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 129 FDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTLMYSRPDLMHRILAI 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNA 240
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 189 NADAVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTTRVLAQLKRTGVDGTDV 248
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG L++ + L D +GLDW+ L+ A L +QGN+DP L
Sbjct: 249 PRIVFTKGGALWLEDMQGL-DCEVLGLDWTANLARARALVGGAVGGPGKALQGNIDPNVL 307
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 308 FAPPEAIAAQARAVLDRFGAPHTDRGTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 367
>gi|294625972|ref|ZP_06704583.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599710|gb|EFF43836.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 354
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFRLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 301 AIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQSLS 352
>gi|119485171|ref|ZP_01619556.1| uroporphyrinogen decarboxylase [Lyngbya sp. PCC 8106]
gi|119457399|gb|EAW38524.1| uroporphyrinogen decarboxylase [Lyngbya sp. PCC 8106]
Length = 354
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 108/345 (31%), Positives = 179/345 (51%), Gaps = 4/345 (1%)
Query: 1 MNERKQ--KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E Q +L +G ++ PP+W+MRQAGRY+ YR +R ++ +F D + VE+
Sbjct: 1 MSESTQIPYLLRAARGEQLDRPPVWMMRQAGRYMKAYRDLRDQYPSFRDRSEKTDIAVEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
+LQP R + D ILFSDIL +G N VE++GP +DP +
Sbjct: 61 SLQPYRAFAPDGVILFSDILTPLPGMGINFDIVESKGPIIDPPIRSLSQIEQVYPLEPEE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L I + + LR+++ N ++GF GAPWT+A+Y I G KD+ + A+ +
Sbjct: 121 SLPFIREILQTLRQEVGNKAAVLGFVGAPWTLAAYAIEGKSSKDYTVIKSMAFSEPEMLH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L L+D A Y+ QI G ++Q+FD+ AG L ++E +A R++ V++ +P
Sbjct: 181 QFLGKLADSIATYVRYQIDCGAQIVQMFDSWAGQLAPQDYETFALPYQKRVVDLVKQTHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ + T + I +DW+V ++ A + VQGN+DP L
Sbjct: 241 DTPMILYINGSSGILERMSK-TGVDMISVDWTVDMAEARSRIGHHLGVQGNIDPCVLFGS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
Q++ D + + G+ I NLGHG+ + +NV +T +
Sbjct: 300 KQLIRDRILETIRKAGNRGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|118475174|ref|YP_892592.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp. fetus
82-40]
gi|166234240|sp|A0RQV9|DCUP_CAMFF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118414400|gb|ABK82820.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp. fetus
82-40]
Length = 343
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 118/339 (34%), Positives = 184/339 (54%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G PIW+MRQAGRYLPEY +R +FL +C + E+TLQP+
Sbjct: 3 FIDACFGKPTPYTPIWMMRQAGRYLPEYMAVRDAAGDFLSLCKDYKKASEVTLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ +G ++F++ EGP + L +++ + L ++ +I
Sbjct: 63 VDAAIMFSDILVVPLEMGMELKFIKGEGPVFENPILSMDSLDKLSVEKAVKNLSYVYDTI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R+KL + LIGFCGAPWT+A+YMI GG K + ++ Y N + + +L +++
Sbjct: 123 KLTREKLSSDKALIGFCGAPWTIATYMIEGGSTKTYNISKKMLYDNPQFLHAILRKVTNA 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AGV+ +QIFD+ A L ++ + + + ++ ++ +YP+ I F K
Sbjct: 183 LKLYLEEQIKAGVNAVQIFDSWASALEQNAYLEFGFSYINELVDYIKSQYPDIPVIVFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + G+DWS PL A E L +QGN++P RL + DGV+
Sbjct: 243 GISGFLNKIG--GKFDVFGVDWSTPLKMAKETLGSRYVLQGNMEPTRLY-SKDAIDDGVD 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL ++ IFNLGHGI P V +N +K+V+ +
Sbjct: 300 EILSIMRGHRHIFNLGHGILPDVPVENAKYFIKSVQEKS 338
>gi|311029477|ref|ZP_07707567.1| uroporphyrinogen decarboxylase [Bacillus sp. m3-13]
Length = 346
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 123/349 (35%), Positives = 190/349 (54%), Gaps = 10/349 (2%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN+ L +G P+W MRQAGR PEYR+I++K+ + ++ + PE +
Sbjct: 1 MNQSTFNDTFLRACRGEKTEHVPLWYMRQAGRSQPEYRKIKEKY-SLFEITHQPELCAYV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
T P+ +YN DAAIL+ DI+ A+G +V GP +D PI + + I
Sbjct: 60 TKLPVDQYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSMQDVEKLGEIHPE- 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + +I +L K+ ++ LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 119 QDVPYVLDTIKLLTKE-QLNVPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAW 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D L+D++ Y+ +QIHAG IQIFD+ G L ++ + + RI S+++ +
Sbjct: 178 FALMDKLADMTITYVRSQIHAGAKAIQIFDSWVGALNVEDYRYFIKPVMTRIFSSLKEE- 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
N I F GA ++ + L + +GLDW +P+S A E PVQGNLDP L+
Sbjct: 237 -NVPLIMFGVGASHLANEWHDLP-LDVVGLDWRLPISEARERGITKPVQGNLDPAILLAP 294
Query: 298 NQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ + AILD + +IFNLGHG+ PQV+P + L V
Sbjct: 295 WEVIEEKAKAILDQGMQQPGYIFNLGHGVFPQVNPDTLKRLATFVHDYS 343
>gi|289664454|ref|ZP_06486035.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289670638|ref|ZP_06491713.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 354
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 188/352 (53%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL+
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLN 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGEGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 301 AIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQSLS 352
>gi|302761784|ref|XP_002964314.1| hypothetical protein SELMODRAFT_438672 [Selaginella moellendorffii]
gi|300168043|gb|EFJ34647.1| hypothetical protein SELMODRAFT_438672 [Selaginella moellendorffii]
Length = 393
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 98/337 (29%), Positives = 172/337 (51%), Gaps = 4/337 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L ++G+ + PP+W+MRQAGRY+ Y+ + K+ +F + E +E++LQP +
Sbjct: 52 DPLLLRAVRGDSVERPPVWMMRQAGRYMKSYQDLCAKYPSFRERSENAELAIEISLQPWK 111
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL + + +GP + PIT+ + + +
Sbjct: 112 AFRPDGVILFSDILTPLTGMNIPFDILAGKGPVIHKPITSMADVDEVTEL-CPEEAVPYV 170
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++S LR ++ N ++GF GAP+T+ASY+I GG K + + A+ + + LL
Sbjct: 171 GQALSSLRAEVGNEAAVLGFVGAPFTLASYIIEGGSSKHFAKIKRLAFGSPEILHALLKK 230
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ Y+ Q G +QIFD+ A L +FE ++ + +I+S V++ +P+ I
Sbjct: 231 LAESIIIYVRYQADKGAQTVQIFDSWATHLSPIDFEQFSLPYLKQIVSEVKKTHPSLPLI 290
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ + + + +DW+V ++ A L ++ VQGN+DP L +
Sbjct: 291 LYASGSGGLLERLGS-SGVDIVSVDWTVDMAEARQRLGRDVAVQGNIDPGALFGSKDFIR 349
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
V + G G I NLGHG+ +NV +
Sbjct: 350 QRVIDTVARAGRGKHILNLGHGVLVGTPEENVAHFFE 386
>gi|118594239|ref|ZP_01551586.1| Uroporphyrinogen decarboxylase (URO-D) [Methylophilales bacterium
HTCC2181]
gi|118440017|gb|EAV46644.1| Uroporphyrinogen decarboxylase (URO-D) [Methylophilales bacterium
HTCC2181]
Length = 355
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 123/350 (35%), Positives = 185/350 (52%), Gaps = 6/350 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M L+ L+ P+W+MRQAGRYLPEYR+ RK +FLD+C ++ E+T
Sbjct: 1 MTPITNDVFLKTLKKESTPYTPVWMMRQAGRYLPEYRKTRKHAGSFLDLCKNADFATEVT 60
Query: 60 LQPIRRYNF-DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
LQP+ RY DAAILFSDIL + DA+G + FV+ EGP+ E + ++
Sbjct: 61 LQPLDRYPLLDAAILFSDILTVPDAMGLGLHFVDGEGPKFHYPLIDEQAIQKLDVPNVEE 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +F ++ ++ L + LIGF G+PWT+A+YM+ G + Y
Sbjct: 121 DLGYVFNAVRSIKTALNGRVPLIGFAGSPWTLATYMVEGQGGTGFLNIKKMLYSRPDLIQ 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKY 237
+L ++ + YL QI AG D + IFD+ G L HE+E+++ + IIS + +
Sbjct: 181 HILKVTTESVSIYLAKQIEAGADAVMIFDSWGGALSHHEYESHSLNYMKVIISNLNLMGF 240
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
+ I F KG G L + + + ++A+G+DW L A ++ + +QGNLDP L+
Sbjct: 241 EDTPKIIFTKGGGQWL-DLQSQSGADALGIDWQTDLGNARKVVNDKIALQGNLDPAILLS 299
Query: 297 GNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G G IFNLGHGIT P+NV ++ VRS
Sbjct: 300 EPKAIRSAVRNVLDSYGHGESHIFNLGHGITQFTPPENVECMLDEVRSYS 349
>gi|113475390|ref|YP_721451.1| uroporphyrinogen decarboxylase [Trichodesmium erythraeum IMS101]
gi|123352425|sp|Q114U6|DCUP_TRIEI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|110166438|gb|ABG50978.1| uroporphyrinogen decarboxylase [Trichodesmium erythraeum IMS101]
Length = 354
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 106/337 (31%), Positives = 178/337 (52%), Gaps = 2/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F + + VE++LQP +
Sbjct: 10 LLRATRGELLDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSENTDIAVEISLQPFHAFK 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D ILFSDIL A+G + +E++GP +DP E + + L I + +
Sbjct: 70 PDGVILFSDILTPLPAIGIDFDIIESKGPIIDPPIRTEAQIDKLHPIEPEESLPFIREIL 129
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR+++ N ++GF GAPWT+A+Y I G KD+ + A+ + L L++
Sbjct: 130 QTLRREVKNEAAVLGFIGAPWTLAAYAIEGKSCKDYTNIKKMAFCQPEMLHKFLGKLAEA 189
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
A Y QI++G VIQ+FD+ AG L ++E +A ++ V++ +PN FI +
Sbjct: 190 IAVYARYQINSGAQVIQMFDSWAGQLSPQDYETFALPYQKLVVQEVKKTHPNTPFILYIN 249
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G+ +L+ + T + + +DWSV ++ A L VQGN+DP L + + +
Sbjct: 250 GSAGLLERMPQ-TGVDIVSVDWSVDIAEARQRLGNNICVQGNIDPGVLFGSQEFIKSRIL 308
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G+ I NLGHG+ + +NV KT +
Sbjct: 309 ETIRKAGNRGHILNLGHGVLKETPEENVEFFFKTAKE 345
>gi|225850499|ref|YP_002730733.1| uroporphyrinogen decarboxylase [Persephonella marina EX-H1]
gi|225646104|gb|ACO04290.1| uroporphyrinogen decarboxylase [Persephonella marina EX-H1]
Length = 346
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 8/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + PIWLMRQAGRY+PEYR++R+K NF+ + +V+ T+ P
Sbjct: 5 KNDLFLRACLREPVERTPIWLMRQAGRYMPEYRELREKAGNFVTFYKDIDLSVKATVLPR 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ DA+I+FSDIL +++G F E EGP +PI T + L D N +
Sbjct: 65 KLLGVDASIIFSDILTPLESIGVKFEFREGEGPVFLNPIETPDDILKLKPFDK--NDVYY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I + + L I IGFCGAP+T+A+YMI G +D + + F Y AF LLD
Sbjct: 123 VGEIIKGVNRALNREIPTIGFCGAPFTLAAYMIEGRTSRDFKKAKAFMYNYPDAFKDLLD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D+ EYL QI +G D +QIFD+ G L ++ +A V +II ++R Y
Sbjct: 183 RLADMLIEYLNFQIESGADAVQIFDSWGGYLSPDDYREFALPPVKKIIKGIKRDYQ--PV 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F KG + + ++ +DW + LS E L + QGNLDP+ L V+
Sbjct: 241 IHFTKGVAGFFDDMI-TSGADVYSVDWMIDLSEVKEKLNGKAAAQGNLDPIVLYASKDVI 299
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ +IL+ G IFNLGHG+ P ++ + V LV V+ E +
Sbjct: 300 REKAVSILNKWGKDTGHIFNLGHGLMPDMEVEKVKYLVDVVKKESV 345
>gi|313216749|emb|CBY37999.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 123/347 (35%), Positives = 190/347 (54%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+IL V +G ++ PIW+MRQAGRYL E+R+ RKK F ++C PEY E+T+QP+
Sbjct: 8 TNDRILRVCRGEEVDRTPIWIMRQAGRYLSEFREYRKK-HEFFEICRNPEYACEVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNY 119
RR++ DA+I+FSDI+VI A+ + +GP P+ T E L+P+++ L Y
Sbjct: 67 RRFDLDASIIFSDIMVIPQAMEMECVMIPGKGPTFTTPLDTPEDLDKINLSPDVNKVLQY 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F +I++ RK + L GF GAPWT+ +YM+ GG K + + + + YQ A
Sbjct: 127 ---VFDAITLTRKTIGGKQPLFGFVGAPWTLMAYMVEGGGSKTYSKAKKWLYQYPEASEK 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LLD L+ V ++L+ Q AG V+Q+F++HA L F + + + RI + V+ K
Sbjct: 184 LLDALTTVCIDFLVGQARAGAQVLQVFESHADALSPELFHKFTLKLLKRIATEVKAKLGK 243
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ F KG +M + + ++ + I +DW++ LEL K VQGNLDP +L
Sbjct: 244 DSPPVSIFCKGGHFMNNEFVK-SEYDIIQVDWTISREQILEL-KSKVVQGNLDPCQLYAP 301
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + +L I NLGHGI P DP ++ + TV E
Sbjct: 302 KEEIEKATREMLKKFEGVRHIANLGHGIYPDTDPDHLRTYIDTVHKE 348
>gi|294665138|ref|ZP_06730440.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605099|gb|EFF48448.1| uroporphyrinogen decarboxylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 354
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 301 AIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQSLS 352
>gi|238486576|ref|XP_002374526.1| uroporphyrinogen decarboxylase [Aspergillus flavus NRRL3357]
gi|317144150|ref|XP_001819939.2| uroporphyrinogen decarboxylase [Aspergillus oryzae RIB40]
gi|220699405|gb|EED55744.1| uroporphyrinogen decarboxylase [Aspergillus flavus NRRL3357]
Length = 363
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 115/355 (32%), Positives = 187/355 (52%), Gaps = 16/355 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LT+Q
Sbjct: 7 SLKNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHEAKGG-RDFFECCRSPEIASTLTIQ 65
Query: 62 PIRRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + ++
Sbjct: 66 PVERYAGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKQVD 125
Query: 119 ---YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L ++++I + R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 126 VKEELDYVYKAIRLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWVYKYPK 185
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + +
Sbjct: 186 ESQALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPK 245
Query: 236 KYPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNL 289
+ FAKGA Y L + + N +GLDW + A + +QGN
Sbjct: 246 RLKEMGLEPVPMTVFAKGAWYALDDLCE-SGYNVVGLDWLHDPAEARRIANGRVTIQGNA 304
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L G + + V ++ G +I NLGHG+TP V P ++ + +
Sbjct: 305 DPGMLYGGRAAITETVETMVKGFEKGKQGWIANLGHGVTPFVKPDDLKFFFEEIH 359
>gi|298493162|ref|YP_003723339.1| uroporphyrinogen decarboxylase ['Nostoc azollae' 0708]
gi|298235080|gb|ADI66216.1| uroporphyrinogen decarboxylase ['Nostoc azollae' 0708]
Length = 350
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 113/346 (32%), Positives = 189/346 (54%), Gaps = 8/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQ
Sbjct: 4 SSTAPLLLRAARGEVVDRPPVWMMRQAGRYMKVYRDLREKYPSFRDRSEIPEVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNP-NIDLFLN 118
P R + D ILFSDI+ +G ++ E +GP + PI TQ +I L+P + + L
Sbjct: 64 PWRAFQPDGVILFSDIVTPLPGIGIDMDIAEGKGPIIYSPIRTQAQIEKLHPLDPEKALP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ I +S LRK++ N T++GF GAPWT+A+Y + G K + + A+ + +
Sbjct: 124 FIKMILES---LRKEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDPTILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L++ A+Y+ QI G V+Q+FD+ AG L +++ +A + V+ +P
Sbjct: 181 QLLTKLANSIADYVRYQIDCGAQVVQMFDSWAGQLSPQDYDTFALPYQKMVFEKVKETHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I G+ +L+ + ++ I +DW+V ++ A L K VQGNLDP L
Sbjct: 241 DTPLILLVTGSAGLLERM-PASGADIITVDWAVDMADARARLGKYVKVQGNLDPGVLFGS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + D V + G+ I NLGHG+ P+ +NV +T ++
Sbjct: 300 KEFIRDRVLDTVRKAGNWGHILNLGHGVLPETPEENVAFFFETAKN 345
>gi|310823311|ref|YP_003955669.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
gi|309396383|gb|ADO73842.1| Uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
Length = 355
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 177/345 (51%), Gaps = 8/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++L+ + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+Q
Sbjct: 6 TSMNDRLLKAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTVQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ R DAAI+FSDIL+ +A+G + + +GP P+ T D +
Sbjct: 65 PVTRLGVDAAIIFSDILIPVEAMGIVLELGD-KGPHFPQPVRTAADIERLAVPD-PVEGT 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++ + +
Sbjct: 123 GFVAEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLLFEQPKLAHTF 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+D YL Q+ AG ++QIFD+ G L ++FE ++ + R++ ++
Sbjct: 183 FQKLTDTLIPYLKMQVEAGASIVQIFDSWGGELSPYDFERFSLPYLTRMVKELQAT--GV 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F G L + T ++ IGLDW +P L ++ VQGNLDP+ L + +
Sbjct: 241 PVIVFGTGMSTHLP-LLKRTGADVIGLDWRIPADDGRRILGQDVAVQGNLDPLHLFLPRE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V IL G IFNLGHGI P DP+ LV+ V
Sbjct: 300 ELEGRVVDILKRAGPVGHIFNLGHGILPPTDPEAAKFLVEAVHRH 344
>gi|311745788|ref|ZP_07719573.1| uroporphyrinogen decarboxylase [Algoriphagus sp. PR1]
gi|126575988|gb|EAZ80266.1| uroporphyrinogen decarboxylase [Algoriphagus sp. PR1]
Length = 340
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 179/345 (51%), Gaps = 6/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G P+WLMRQAGR LPEYR +R+ F+++ TPE E+T+
Sbjct: 1 MELQNDLLLRAAKGEKTERTPVWLMRQAGRILPEYRAVRESVSGFIELAQTPELAAEVTI 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ DAAI+FSDILVI +A+G +E +GP E L + N L
Sbjct: 61 QPVDLLGVDAAIIFSDILVIPEAMGLPYEMIEKKGPWFPETVRTEADLKKLRVADGANDL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I I +K L + LIGF GAPWT+ +YM+ G K + R Y + L
Sbjct: 121 SYVIKAIEITKKNLNGRVPLIGFAGAPWTIFAYMVEGSGSKTFSRAREILYTQPAFAHQL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ ++D + YL AQI AG D++Q+FD+ AG LG ++ ++ R + +I A+
Sbjct: 181 MQMITDSTINYLKAQIKAGADLVQVFDSWAGILGPKQYLEFSHRYISQICDAINE----V 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
FAKGA + + +L + IGLDW++ + + +L +QGNLDP L +
Sbjct: 237 PVTVFAKGAFFAREEMGKL-NCETIGLDWNMGIEESYKLIGANKTLQGNLDPAALYGNPE 295
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +++ I NLGHG+ P + P+ V ++TV+
Sbjct: 296 EVRSATLEMMEQFKGKRHIANLGHGVYPDIKPEKVKVFIETVKGF 340
>gi|319764569|ref|YP_004128506.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|330826785|ref|YP_004390088.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans K601]
gi|317119130|gb|ADV01619.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|329312157|gb|AEB86572.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans K601]
Length = 372
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 118/360 (32%), Positives = 179/360 (49%), Gaps = 20/360 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L + P+WLMRQAGRYLPEY+ R + +F+ + +Y E+TLQP+
Sbjct: 9 RNDTFLRACLRQATDYTPLWLMRQAGRYLPEYKATRARAGSFMGLATNVDYATEVTLQPL 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL + DA+G + F E EGPR E + + ++ L +
Sbjct: 69 ERFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRFAKAVRSEADVAQLAVP-DMDRLRYV 127
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 128 FDAVTSIRRALDGRVPLIGFSGSPWTLACYMVEGKGSDDYRMVKSLMYARPDLMHRILAV 187
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN---A 240
+D A YL AQI AG + IFD+ G L + F+ ++ R+++ ++R +
Sbjct: 188 NADAVARYLNAQIDAGAQAVMIFDSWGGVLADGMFQQFSLAYTARVLAQLQRTGADGQPV 247
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRL 294
I F KG G L++ + L D +GLDW+ L A + +QGN+DP L
Sbjct: 248 PRIVFTKGGGIWLQDMKAL-DCEVLGLDWTANLGQARAIVGGSAGGPGKALQGNIDPNVL 306
Query: 295 VVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + A+LD G+ IFNLGHGI+ P++V LV+ V
Sbjct: 307 FAPPEAIAAQARAVLDSFGTPHTDKDTTGPTHIFNLGHGISQHTPPEHVAALVEAVHGHS 366
>gi|21243740|ref|NP_643322.1| uroporphyrinogen decarboxylase [Xanthomonas axonopodis pv. citri
str. 306]
gi|23813978|sp|Q8PI85|DCUP_XANAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21109326|gb|AAM37858.1| uroporphyrinogen decarboxylase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 120/352 (34%), Positives = 188/352 (53%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL+
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLN 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGDGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V++
Sbjct: 301 AIRAEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQTLS 352
>gi|78048719|ref|YP_364894.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123743863|sp|Q3BQR9|DCUP_XANC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78037149|emb|CAJ24894.1| uroporphyrinogen decarboxylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 186/352 (52%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPD 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV+ V+S
Sbjct: 301 AIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQSLS 352
>gi|325925433|ref|ZP_08186829.1| uroporphyrinogen decarboxylase [Xanthomonas perforans 91-118]
gi|325544161|gb|EGD15548.1| uroporphyrinogen decarboxylase [Xanthomonas perforans 91-118]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 185/352 (52%), Gaps = 12/352 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPELLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGTGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPD 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V LD G +FNLGHG++P ++P++V LV V+S
Sbjct: 301 AIRSEVAKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVDAVQSLS 352
>gi|221633364|ref|YP_002522589.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
gi|221156299|gb|ACM05426.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
Length = 376
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 125/343 (36%), Positives = 188/343 (54%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L + ++ P+WLMRQAGRYLPEYR +R+++ + L++C PE E+TLQP+R
Sbjct: 35 NSPLLRACRRKTVDMTPVWLMRQAGRYLPEYRALRERY-SLLELCRQPELAAEVTLQPLR 93
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAI+F+DIL+ ALG + F E EGP + PI P D L P+
Sbjct: 94 RYPLDAAIIFADILLPVLALGVPLSFAEGEGPVIGAPIRDPAAVDRLPEPDESP--LWPV 151
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I I+R +LP + +IGF GAP+T+ASY+I GG + + + + F A+ LL+
Sbjct: 152 AEAIRIVRAELPERVAVIGFAGAPFTLASYLIEGGSSRQYVRTKRFLLTERSAWERLLER 211
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ YL+ Q+ AG +V+Q+FD+ AG L + + RI++AVR I
Sbjct: 212 LTELTIRYLMLQVRAGAEVVQLFDSWAGALAPAVYRDAVLPWTRRIVAAVREL--GVPVI 269
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F+ G L + T ++ IG+DW + L A +QGNLDP L+ + +
Sbjct: 270 VFSTGTAGYL-DLVADTGADVIGVDWRIELDRAWNAIGARAIQGNLDPAWLLAPAEDLRK 328
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+LD G IFNLGHG+ P+ P V LV+ V
Sbjct: 329 AARDVLDRAAGRPGHIFNLGHGVLPETSPDAVAILVEFVHEYS 371
>gi|27377510|ref|NP_769039.1| uroporphyrinogen decarboxylase [Bradyrhizobium japonicum USDA 110]
gi|38257549|sp|Q89SK1|DCUP_BRAJA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|27350654|dbj|BAC47664.1| uroporphyrinogen decarboxylase [Bradyrhizobium japonicum USDA 110]
Length = 344
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 157/340 (46%), Positives = 210/340 (61%), Gaps = 4/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++VL G PP+W+MRQAGRYLPEYR++R K FLD+C+ PE E+TLQPIRR
Sbjct: 7 KPFIDVLSGQRQAIPPMWMMRQAGRYLPEYREVRAKAGGFLDLCFNPELAAEVTLQPIRR 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIF 124
+ FDAAI+FSDILVI ALGR+VRF EGPR++P+ ++ L P D L P+F
Sbjct: 67 FGFDAAIIFSDILVIPYALGRSVRFEVGEGPRLEPLDDPAKVATLAPRAD--FGKLAPVF 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ I+R L LIGFCGAPWTVA+YM++G D R+ AY++ AF ++D L
Sbjct: 125 DALKIVRGALDPKTALIGFCGAPWTVATYMVAGHGTPDQAPARMMAYRHPDAFAKIIDVL 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D S EYL+AQ+ AG + +QIFDT AG L EF ++ RI+ VR K P+AK I
Sbjct: 185 VDNSIEYLLAQLAAGANALQIFDTWAGVLPPAEFARWSVEPTRRIVEGVRAKVPDAKIIG 244
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F +GAG L Y T N + +DW+ +F E +Q VQGNLDP+ L+ G +
Sbjct: 245 FPRGAGAQLPGYVEATGVNGVSIDWTAEPAFIRERVQSRVAVQGNLDPLVLITGGAALDR 304
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +L G FIFNLGHGI P+ +V ++K VR
Sbjct: 305 AVDNVLANFAQGRFIFNLGHGIQPETPIAHVEQMLKRVRG 344
>gi|300689845|ref|YP_003750840.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum PSI07]
gi|299076905|emb|CBJ49518.1| uroporphyrinogen decarboxylase [Ralstonia solanacearum PSI07]
Length = 408
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 180/353 (50%), Gaps = 15/353 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L+ P+WLMRQAGRYLPEY R + +FL + +P Y E+TLQP+
Sbjct: 51 NDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEVTLQPLD 110
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR P+ ++ D + L +
Sbjct: 111 RYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPD--MASLQYV 168
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +R+ L + LIGF G+PWT+A YM+ GG D + Y +
Sbjct: 169 FDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPDLMHR 228
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ + +YL AQI AG + +FDT G L + ++ ++ + R++ +R
Sbjct: 229 ILEINAVAVTDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRAGADG 288
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
I F KG G L++ + ++A+G+DW+V L A +QGNLDP L
Sbjct: 289 QRVPVILFTKGGGLWLESMAEV-GADALGVDWTVNLQLARVRTGGRVALQGNLDPTVLFA 347
Query: 297 GNQVMIDGVNAILDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +L+ +G +FNLGHGI+ P++V LV VR+
Sbjct: 348 EPEAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVSVLVDEVRTFS 400
>gi|16332025|ref|NP_442753.1| uroporphyrinogen decarboxylase [Synechocystis sp. PCC 6803]
gi|1706336|sp|P54224|DCUP_SYNY3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|1001337|dbj|BAA10824.1| uroporphyrinogen decarboxylase [Synechocystis sp. PCC 6803]
Length = 350
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 106/345 (30%), Positives = 180/345 (52%), Gaps = 4/345 (1%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M E +L V +G V+ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E+
Sbjct: 1 MTEANDLPYLLRVARGEVVKRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
+LQP + + D I+FSDIL +G +E++GP +DP + + + +
Sbjct: 61 SLQPWQAFQPDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQVDQLHALDPES 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L I + LRK++ N T++GF GAPWT+A+Y I G KD+ + A+ +
Sbjct: 121 SLPFIKTILGTLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKDYKVIKQMAFSEPAILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LD +++ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P
Sbjct: 181 SFLDKIAEAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYDTFALPYQQKVVKLVKEIHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ + + + + +DW+V ++ A L KE VQGN+DP L
Sbjct: 241 DTPLILYISGSAGILERMGK-SGVDIVSVDWTVDMADARQRLGKEMKVQGNMDPGVLFGS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + + G G IFNLGHG+ NV +T +
Sbjct: 300 QDFIKERILDTVRKAGQGGHIFNLGHGVLVGTPEDNVRFFFETAK 344
>gi|209886239|ref|YP_002290096.1| uroporphyrinogen decarboxylase [Oligotropha carboxidovorans OM5]
gi|209874435|gb|ACI94231.1| uroporphyrinogen decarboxylase [Oligotropha carboxidovorans OM5]
Length = 347
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 152/341 (44%), Positives = 208/341 (60%), Gaps = 2/341 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+VL G PPP+W+MRQAGRYLPEYR +R+K FLD+ Y P++ E+TLQPIRR
Sbjct: 7 KPFLDVLSGQRQVPPPLWMMRQAGRYLPEYRAVREKAGGFLDLVYNPDFAAEVTLQPIRR 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAI+FSDILV+ ALGR+VRF EGPR+ P+ T E P L P+++
Sbjct: 67 FGFDAAIIFSDILVVPHALGRDVRFEVGEGPRLTPLDTPEKVAAEP-FSANLATFEPVYE 125
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R++L LIGFCGAPWTVA+YM++G D R+ AY AF ++D L
Sbjct: 126 ALRRVRRELAPETALIGFCGAPWTVATYMVAGQGTPDQAPARLLAYSAPEAFAKIIDALV 185
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ S YL+ Q+ AG +V+QIFDT AG L EF ++ RI+ VR + P+AK I F
Sbjct: 186 ETSIPYLVGQLRAGAEVLQIFDTWAGVLPPAEFARWSIAPTRRIVEGVRAQVPDAKIIGF 245
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+GAG +L Y T +A+ +DW+ S E +Q +QGNLDP+ L+ G +
Sbjct: 246 PRGAGALLPAYIAETGVDAVSIDWTAEPSLMRERVQSRVALQGNLDPLALIAGGDTLDRA 305
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ +L G IFNLGHGI PQ +V +V VR+ K
Sbjct: 306 VDDVLANYAGGRLIFNLGHGILPQTPIAHVERMVARVRAFK 346
>gi|313235519|emb|CBY10974.1| unnamed protein product [Oikopleura dioica]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 122/347 (35%), Positives = 190/347 (54%), Gaps = 12/347 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+IL + +G ++ PIW+MRQAGRYL E+R+ RKK F ++C PEY E+T+QP+
Sbjct: 8 TNDRILRICRGEEVDRTPIWIMRQAGRYLSEFREYRKK-HEFFEICRNPEYACEVTMQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFLNY 119
RR++ DA+I+FSDI+VI A+ + +GP P+ T E L+P+++ L Y
Sbjct: 67 RRFDLDASIIFSDIMVIPQAMEMECVMISGKGPTFTSPLDTPEDLDKINLSPDVNKVLQY 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+F +I++ RK + L GF GAPWT+ +YM+ GG K + + + + YQ A
Sbjct: 127 ---VFDAITLTRKTIGGKQPLFGFVGAPWTLMAYMVEGGGSKTYSKAKKWLYQYPEASEK 183
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LLD L+ V ++L+ Q AG V+Q+F++HA L F + + + RI + V+ K
Sbjct: 184 LLDALTTVCIDFLVGQARAGAQVLQVFESHADALSPELFHKFTLKLLKRIATEVKAKLGK 243
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ F KG +M + + ++ + I +DW++ LEL K VQGNLDP +L
Sbjct: 244 DSPPVSIFCKGGHFMNNEFVK-SEYDIIQVDWTISREQILEL-KSKVVQGNLDPCQLYAP 301
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + +L I NLGHGI P DP ++ + TV E
Sbjct: 302 KEEIEKATREMLKKFEGVRHIANLGHGIYPDTDPDHLRTYIDTVHKE 348
>gi|195124551|ref|XP_002006755.1| GI18416 [Drosophila mojavensis]
gi|193911823|gb|EDW10690.1| GI18416 [Drosophila mojavensis]
Length = 356
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 126/346 (36%), Positives = 185/346 (53%), Gaps = 10/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++R K +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELR-KLHDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPIRTPEDLK-RLTPDGALSRLSY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + Y LL+
Sbjct: 129 VGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLYDYPEDSKLLLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+DV +YL Q+ AG ++QIF++ A L + EF ++ + RI + ++
Sbjct: 189 LLTDVIVDYLEMQVEAGAQMLQIFESSAEHLTKDEFLVWSVPFLRRIRDDLVDRLTKKAV 248
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 249 STVPLTIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAAVGPNITLQGNLDPQDMYR 307
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ G +I NLGHGITPQ ++ LV V
Sbjct: 308 DPSELHTLTTDMVHKFGKSRYIANLGHGITPQTPIASMEVLVDAVH 353
>gi|297736517|emb|CBI25388.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 103/344 (29%), Positives = 181/344 (52%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQ
Sbjct: 48 NATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQ 107
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + ++ +GP +P+ T + + + +
Sbjct: 108 PWKVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREF-VPEDSV 166
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ILRK++ N ++GF GAP+T+ASY++ GG K + + A+ + + L
Sbjct: 167 PYVGEALTILRKEVDNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHAL 226
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A+Y+ Q G +QIFD+ A L +FE ++ + +I+ +V++ +PN
Sbjct: 227 LQKFTTSMAKYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQTHPNL 286
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L + VQGN+DP L +
Sbjct: 287 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVLFGSKE 345
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +N + G G I NLGHGI +NV + R
Sbjct: 346 FITNRINDTVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVARG 389
>gi|75908009|ref|YP_322305.1| uroporphyrinogen decarboxylase [Anabaena variabilis ATCC 29413]
gi|123758850|sp|Q3MC76|DCUP_ANAVT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|75701734|gb|ABA21410.1| uroporphyrinogen decarboxylase [Anabaena variabilis ATCC 29413]
Length = 350
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 185/345 (53%), Gaps = 8/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+L +G +++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQ
Sbjct: 4 TSTAPHLLRAARGEIVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLN 118
P + + D ILFSDI+ LG + E +GP + PI TQ +I L P + L
Sbjct: 64 PWKAFQPDGVILFSDIVTPLPGLGIEMDIAEGKGPIIHAPIRTQAQIEQLRPLEPEAALP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ I Q+ LR+++ + T++GF GAPWT+A+Y + G K + + A+ +
Sbjct: 124 FIKTILQA---LRQEVGHQSTVLGFVGAPWTLAAYAVEGKGSKTYSIIKNLAFSEPAILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L+D A Y QI +G V+Q+FD+ AG L +++ +A R+ +++ +P
Sbjct: 181 QLLTKLADAIAIYARYQIDSGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQIKQTHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
+ I G+ +L+ + + ++ + +DW+V ++ A L K+ VQGNLDP L
Sbjct: 241 DTPLILLVSGSAGVLERMGQ-SGADIVTVDWTVDMADARARLGKQMKVQGNLDPGVLYAS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
Q + D + + G+ I NLGHG+ P +NV +T +
Sbjct: 300 KQFIRDRIIDTVRKAGNWGHILNLGHGVLPDTPEENVAFFFETAK 344
>gi|328869886|gb|EGG18261.1| uroporphyrinogen decarboxylase [Dictyostelium fasciculatum]
Length = 357
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 120/345 (34%), Positives = 193/345 (55%), Gaps = 7/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +G ++ P+W+MRQAGRYLPE++++R +F +C TPE ++TLQPI
Sbjct: 7 TNDLFIRSCKGELVERVPVWIMRQAGRYLPEFKEVRADT-DFFGVCKTPELACKVTLQPI 65
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
RY DA+I+FSDILV+ A+G V+ + +GP P+ T E + L
Sbjct: 66 DRYPGLDASIIFSDILVVPQAMGLEVQMIPGKGPHFPQPLKTPEEMSRLIYPVDVHSSLK 125
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNW 179
+F++I++ R +L + LIGF GAPWT+ +Y I GG I + + + Y + A +
Sbjct: 126 YVFEAITLTRHRLGGRVPLIGFTGAPWTLMAYCIEGGGISGGNLNAAKGWLYNHKEASHK 185
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+DV +YL+ QI AG IQ+FD+ AG L H F +A + I VR K+PN
Sbjct: 186 LLRMLTDVCIDYLVGQIEAGAQAIQVFDSWAGELSPHLFYEFAQPYLLEIAEKVRAKHPN 245
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNLDPMRLVVG 297
I FAKGA + L++ + + +G+DW++ + A + + + +QGNLDP L
Sbjct: 246 IPLILFAKGANHALESLAANSVYDVLGIDWTIDPTQARLITEKYKKTLQGNLDPAVLYCP 305
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+++ + V ++ G +I NLGHG+ PQ +P + + + ++
Sbjct: 306 KEIVDEQVEKMIQGFGIQRYIANLGHGMQPQHNPDSANNFINSIH 350
>gi|124025350|ref|YP_001014466.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL1A]
gi|166234268|sp|A2C141|DCUP_PROM1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123960418|gb|ABM75201.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. NATL1A]
Length = 352
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 102/343 (29%), Positives = 179/343 (52%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNE +L +G + PP+W+MRQAGRY+ YR +R +F + P+ + E+++
Sbjct: 1 MNETTPLLLRAARGEHVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G N VE++GP ++ PI + +++ L P
Sbjct: 61 QPFTAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPE--E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 119 SMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA ++++ V+ K+P
Sbjct: 179 QLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKEKHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ + T + + LDW+V ++ L + VQGN+DP L
Sbjct: 239 DTPMILYISGSAGVLERMGQ-TGVDIVSLDWTVDMADGLKRLPQSVGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + ++ I NLGHGI P +N +
Sbjct: 298 PDAIRSRIVDVVKKAKGRKHILNLGHGILPGTPEENARVFFEA 340
>gi|115377485|ref|ZP_01464687.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
gi|115365529|gb|EAU64562.1| uroporphyrinogen decarboxylase [Stigmatella aurantiaca DW4/3-1]
Length = 348
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 115/342 (33%), Positives = 177/342 (51%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L+ + + P+WLMRQAGRYLPEYR IR FLD+C P+ E+T+QP+
Sbjct: 2 NDRLLKAARRQPTDTTPVWLMRQAGRYLPEYRAIRGNIA-FLDLCKHPDLAAEVTVQPVT 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R DAAI+FSDIL+ +A+G + + +GP P+ T D + +
Sbjct: 61 RLGVDAAIIFSDILIPVEAMGIVLELGD-KGPHFPQPVRTAADIERLAVPD-PVEGTGFV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I RK L + + +IGF GAP+T+A+YM+ GG K + + ++ + +
Sbjct: 119 AEAIRRTRKALNDSVPVIGFAGAPFTLAAYMVEGGGSKSYILIKRLLFEQPKLAHTFFQK 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D YL Q+ AG ++QIFD+ G L ++FE ++ + R++ ++ I
Sbjct: 179 LTDTLIPYLKMQVEAGASIVQIFDSWGGELSPYDFERFSLPYLTRMVKELQAT--GVPVI 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F G L + T ++ IGLDW +P L ++ VQGNLDP+ L + + +
Sbjct: 237 VFGTGMSTHLP-LLKRTGADVIGLDWRIPADDGRRILGQDVAVQGNLDPLHLFLPREELE 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V IL G IFNLGHGI P DP+ LV+ V
Sbjct: 296 GRVVDILKRAGPVGHIFNLGHGILPPTDPEAAKFLVEAVHRH 337
>gi|39934581|ref|NP_946857.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris CGA009]
gi|39648430|emb|CAE26951.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris CGA009]
Length = 325
Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 147/324 (45%), Positives = 209/324 (64%), Gaps = 2/324 (0%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W+MRQAGRYLPEYR R + +FLD+C+ E E+TLQPIRR+ FDAAI+FSDILV+
Sbjct: 2 WMMRQAGRYLPEYRATRAQAGSFLDLCFNAELAAEVTLQPIRRFGFDAAIIFSDILVVPY 61
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
ALGR+VRF EGPR+DP+ + ++ N + L+ L P+F+++ I+R++L TLIG
Sbjct: 62 ALGRSVRFEVGEGPRLDPLNSPDLVGTL-NNAIDLSKLEPVFEALRIVRRELKPETTLIG 120
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
FCG+P+TVA+YM++G D R+ AYQ+ AF ++D L + S +YL+ Q+ AG DV
Sbjct: 121 FCGSPFTVATYMVAGQGTSDQHPARLMAYQHPGAFAKIIDVLVESSIQYLLKQLDAGADV 180
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFDT AG L EFE + RI+ +R+ P K I F +GAG +L + T
Sbjct: 181 LQIFDTWAGILPPREFEKWCIEPTRRIVEGIRKVKPGTKIIGFPRGAGALLPAFVERTGV 240
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+A+ +DW+ +F E +Q + +QGNLDP+ L+ G + GV+ +L+ SG IFNL
Sbjct: 241 DAVSIDWTAEPAFVREKVQTKVAIQGNLDPLLLIAGGSALDQGVDDVLNNFSSGRHIFNL 300
Query: 322 GHGITPQVDPKNVLDLVKTVRSEK 345
GHGITP +V ++K VR K
Sbjct: 301 GHGITPDAPIAHVEQMIKRVRDYK 324
>gi|237752607|ref|ZP_04583087.1| uroporphyrinogen decarboxylase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376096|gb|EEO26187.1| uroporphyrinogen decarboxylase [Helicobacter winghamensis ATCC
BAA-430]
Length = 340
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 189/340 (55%), Gaps = 7/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W MRQAGRYL EY+++RK+ +FL +C P+ E+TLQP+ N
Sbjct: 4 FIDACFKKHTPYTPVWFMRQAGRYLSEYKEVRKQAGDFLSLCKNPKLASEVTLQPVEILN 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI +G ++ F EGP+ +PI++ + L D L ++++
Sbjct: 64 VDAAILFSDILVIPLEMGMDLGFFAGEGPKFANPISSTQD--LIKLSDNAYEKLSYVYET 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS+ R+KL LIGFCGAPWT+A+YMI G K + +++ YQN + + +L ++
Sbjct: 122 ISLTRQKLAKDKALIGFCGAPWTLATYMIEGEGSKTYVKSKKMLYQNPKFLHEILQKITY 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL QI AGV+ + +FD+ A L + + + + I ++ KYP+ I F
Sbjct: 182 NLKYYLEYQIKAGVNAVMVFDSWASALEQDAYLEFGWKYCKEIADFIKDKYPHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PLS A E L + +QGNL+P R+ M+ G
Sbjct: 242 KGISGFLDRI--DGNFDVFGVDWSTPLSSAKEKLGSKYVLQGNLEPCRIYA-KDSMLKGA 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD++ IFNLGHG+ P + +N + LV+ + + K
Sbjct: 299 KEILDLMQGSAHIFNLGHGMLPDLPRENAIALVEFIHNYK 338
>gi|158339423|ref|YP_001520600.1| uroporphyrinogen decarboxylase [Acaryochloris marina MBIC11017]
gi|158309664|gb|ABW31281.1| uroporphyrinogen decarboxylase [Acaryochloris marina MBIC11017]
Length = 355
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 111/339 (32%), Positives = 182/339 (53%), Gaps = 4/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F + PE +E++LQP R
Sbjct: 9 PRLLRAARGEVLDRPPVWMMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEISLQPWRA 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D ILFSDI+ +G + E +GP + +PI T E +++ L I
Sbjct: 69 FKPDGVILFSDIVTPLPGIGIKMDVAEGKGPIIEEPIRTMEQVNNLHDLEPD-ESLPFIR 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q ++ LR+++ N T++GF GAPWT+A+Y I G K + + A+ + + L+ +
Sbjct: 128 QILTALRQEVGNQSTVLGFVGAPWTLAAYAIEGKGSKHYSVIKGMAFDDPTILHAFLEKI 187
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
SD A Y+ QI G V+Q+FD+ AG L +FE +A R+ V+ +P+ I
Sbjct: 188 SDAIATYVRHQIDCGAQVVQMFDSWAGQLSPIDFETFALPYQQRVFRQVKETHPDTPLIL 247
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
A G+ +L+ + + ++ I +DW+V ++ A L VQGN+DP L + D
Sbjct: 248 LASGSAGLLERMAQ-SGADIISVDWTVDMADARKRLGPNLHVQGNMDPGVLFGSQDFIRD 306
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G+ I NLGHGI P +N +TV+
Sbjct: 307 RILDTIRKAGNKGHIMNLGHGILPTTPEENAAFFFETVK 345
>gi|332705581|ref|ZP_08425657.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
gi|332355373|gb|EGJ34837.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
Length = 353
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 108/343 (31%), Positives = 183/343 (53%), Gaps = 5/343 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E++LQ
Sbjct: 4 STQVPYLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDIAIEISLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL +G VE++GP ++ PI TQE +D L+
Sbjct: 64 PWKAFQPDGVILFSDILTPLPGIGIEFEIVESKGPIINQPIRTQEQIDQLHLLD--LDRF 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I + + LR+++ N ++GF GAPWT+ +Y I G K++ + A+ +
Sbjct: 122 GFIREILKALRQEVGNEAAVLGFVGAPWTLGAYAIEGKSSKNYSIIKGMAFSQPAMLHQF 181
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D A Y+ QI++G VIQ+FD+ AG L ++E +A R++ V+ +P+
Sbjct: 182 LGKLADAIAIYVRYQINSGAQVIQMFDSWAGELSPQDYETFALPYQQRVVQQVKATHPDT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
FI + G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L
Sbjct: 242 PFILYISGSAGVLERMGQ-SGVDMVSVDWTVDMAEARTRLGDKMKVQGNIDPGVLFGSQA 300
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D + + G+ I NLGHG+ P NV +T +
Sbjct: 301 FIRDRIVDTIRKAGNKGHILNLGHGVLPGTPEDNVRFFFETAK 343
>gi|319791435|ref|YP_004153075.1| uroporphyrinogen decarboxylase [Variovorax paradoxus EPS]
gi|315593898|gb|ADU34964.1| uroporphyrinogen decarboxylase [Variovorax paradoxus EPS]
Length = 369
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 122/362 (33%), Positives = 176/362 (48%), Gaps = 22/362 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + P+WLMRQAGRYLPEY R K +F+ + +Y E+TLQP+
Sbjct: 7 QNDTFLRACWRQATDHTPVWLMRQAGRYLPEYVATRAKAGSFMGLATNTDYATEVTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL + DA+G + F EGPR P+ + D + L
Sbjct: 67 ARYPLDAAILFSDILTVPDAMGLGLSFEAGEGPRFARPVRDEAGVAALEVPD--MEKLRY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F +++ +RK L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 125 VFSAVASIRKALDGRVPLIGFSGSPWTLACYMVEGAGSSDYRLVKSMLYGRPDLMHRVLA 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+D A YL AQI AG + IFD+ G L + F+ ++ R+++A++R +
Sbjct: 185 VNADSVATYLNAQIDAGAQAVMIFDSWGGVLADGAFQEFSLAYTARVLAALKRTGADGQP 244
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL------ELQKEGPVQGNLDPMR 293
I F KG G L R L D +G+DW+V L+ A K +QGN+DP
Sbjct: 245 VPRIVFTKGGGLWLDAMRAL-DCEVLGVDWTVNLATARLQIAEGSDGKAKALQGNIDPNV 303
Query: 294 LVVGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + V +L G IFNLGHGI+ P +V LV+ V ++
Sbjct: 304 LFAPPAQIEAEVAKVLRAFGKPHADRNAPGPTHIFNLGHGISQFTPPDHVAALVEAVHTQ 363
Query: 345 KI 346
Sbjct: 364 SC 365
>gi|91095059|ref|XP_972457.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Tribolium
castaneum]
Length = 354
Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 195/348 (56%), Gaps = 12/348 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G V + P+W+MRQAGRYLPE+ + RK +F ++C TP+ E+TL PI
Sbjct: 8 KNDRLLRAARGEVPDKLPVWVMRQAGRYLPEFMEFRKD-HSFFEICQTPQLACEVTLMPI 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+RY+ DAAI+FSDILVI ALG V GP + +P+T + + LN ++ L
Sbjct: 67 KRYDLDAAIIFSDILVIPQALGMVVEMKAGIGPVLPEPLTLENFHELNKT--GAVDRLKY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I++ R KL + L GF GAPWT+ YMI GG K + + + Y + + LL+
Sbjct: 125 VGEAITLTRHKLDGKVPLFGFSGAPWTLMGYMIEGGGSKTLSKAKKWLYAYPKIAHKLLE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKY 237
L++V +Y++ Q+ AG ++QIFD++A L + + + + +I +VR +K
Sbjct: 185 LLTEVIIDYVVMQVEAGAQILQIFDSNADLLNKELYTKFGLPYLKKIRDSVRLKLNQKKL 244
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLV 295
+ FAKGA Y L L +G+DW++ L K VQGNLDP L
Sbjct: 245 EQVPMVLFAKGAHYCLAEQADL-GYEVLGVDWTLEPQVVRTLLKGKNVTVQGNLDPCALY 303
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +I V+ +++ GS +I NLGHGI P +++ LV+TV +
Sbjct: 304 APKEELIALVHKMVEEFGSQRYIVNLGHGIYPDAPTESLQTLVETVHN 351
>gi|72381859|ref|YP_291214.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL2A]
gi|123773819|sp|Q46LW7|DCUP_PROMT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72001709|gb|AAZ57511.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
NATL2A]
Length = 352
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 180/343 (52%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MNE +L +G + PP+W+MRQAGRY+ YR +R +F + P+ + E+++
Sbjct: 1 MNETTPLLLRAARGENVERPPVWMMRQAGRYMKVYRDLRDNHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + + D ILFSDIL +G N VE++GP ++ PI + +++ L P
Sbjct: 61 QPFKAFQPDGVILFSDILTPLPGMGINFDIVESKGPLINDPIRSLKQVKDLKPLQPE--E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 119 SMSFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA ++++ V+ K+P
Sbjct: 179 QLLNHFAESIANYLSYQIQSGAQVVQMFDSWAGQLSPQDYDEFAAPYQQKVVNLVKEKHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +++ + T + + LDW+V ++ L + VQGN+DP L
Sbjct: 239 DTPMILYISGSAGVIERMGQ-TGVDIVSLDWTVDMADGLKRLPQAVGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + ++ I NLGHGI P +N +
Sbjct: 298 PDAIRSRIVDVVRKAKGRKHILNLGHGILPGTPEENARVFFEA 340
>gi|220909768|ref|YP_002485079.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7425]
gi|219866379|gb|ACL46718.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7425]
Length = 349
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 113/351 (32%), Positives = 182/351 (51%), Gaps = 9/351 (2%)
Query: 1 MNERKQKI---LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M + Q + L +G ++ PP+W+MRQAGRY+ YR +R K+ +F D + VE
Sbjct: 1 MTAKTQTLPHLLRAARGERLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSEKTDLAVE 60
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDL 115
++LQP R + D ILFSDIL +G +E+ GP +D PI T E I L P
Sbjct: 61 ISLQPFRAFEPDGVILFSDILTPLPGMGIPFDIIESRGPIIDPPIRTLEQIKQLRPLEPE 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L I + ++ LR+++ + T++GF GAPWT+A+Y I G KD+ + A+
Sbjct: 121 --ESLPFIREILTTLRQEVGDRATVLGFVGAPWTLAAYAIEGKSSKDYTIIKSLAFAQPE 178
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L ++D A Y+ QI +G V+QIFD+ AG L +++ +A R+I V+
Sbjct: 179 ILHQFLAHIADSIATYVRYQIDSGAQVVQIFDSWAGQLSPIDYDTFALPYQQRVIQQVKA 238
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRL 294
+P I + G+ +L+ + + + + +DW V ++ A + G VQGN+DP+ L
Sbjct: 239 THPETPLILYISGSAGVLERMGK-SGVDLVSVDWMVDMAEARQRLGSGVGVQGNMDPVAL 297
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D + + G I NLGHG+ +NV +TV+S +
Sbjct: 298 FGPQPFIRDRIYDTIRKAGQQGHIMNLGHGVLQNTPEENVAFFFETVKSFR 348
>gi|302557675|ref|ZP_07310017.1| uroporphyrinogen decarboxylase [Streptomyces griseoflavus Tu4000]
gi|89274977|gb|ABD65940.1| uroporphyrinogen decarboxylase [Streptomyces fungicidicus]
gi|302475293|gb|EFL38386.1| uroporphyrinogen decarboxylase [Streptomyces griseoflavus Tu4000]
Length = 364
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 117/344 (34%), Positives = 181/344 (52%), Gaps = 10/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R+ L+ + + P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+
Sbjct: 25 RESAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIG-MLDSCMRPELVTEITLQPV 83
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAI FSDI+V A+G ++ GP ++ P+ T+ L DL +
Sbjct: 84 RRHHVDAAIYFSDIVVPLKAIGIDLDIKPGIGPVVEQPVRTRAD--LARLRDLTPEDVSY 141
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I +L ++L LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 142 VTEAIGMLTREL-GSTPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLD 200
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D++A +L QI AG +Q+FD+ AG L ++ + ++ AV
Sbjct: 201 RLADITAAFLDVQIRAGASAVQLFDSWAGALAPSDYRRSVLPASAKVFRAVAGH--GVPR 258
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L ++ +G+DW VP+ A + +QGNLDP L G + +
Sbjct: 259 IHFGVGTGELLGLMGE-AGADIVGVDWRVPMDEAARRVGPGKALQGNLDPTVLFAGREAV 317
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD G IFNLGHG+ P DP + LV+ V ++
Sbjct: 318 ETKAREVLDTAAGLEGHIFNLGHGVMPSTDPDALTRLVEYVHTQ 361
>gi|284053030|ref|ZP_06383240.1| uroporphyrinogen decarboxylase [Arthrospira platensis str. Paraca]
gi|291566307|dbj|BAI88579.1| uroporphyrinogen III decarboxylase [Arthrospira platensis NIES-39]
Length = 354
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 108/347 (31%), Positives = 180/347 (51%), Gaps = 8/347 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + Q +L +G ++ PP+W+MRQAGRY+ YR +R+++ +F D + VE+
Sbjct: 1 MTDSTQTPYLLRAARGEALDRPPVWMMRQAGRYMKAYRDLREQYPSFRDRSEKTDIAVEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLF 116
+LQP R + D ILFSDIL +G + VE++GP +DP T +I L+P
Sbjct: 61 SLQPFRAFAPDGVILFSDILTPLPGIGIDFDIVESKGPIIDPPIRTQSQIDQLHPIEPEA 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L I + + LR ++ N ++GF GAPWT+A+Y I G KD+ + A+
Sbjct: 121 S--LPFIREILQTLRHEVGNKAAVLGFVGAPWTLAAYAIEGKSSKDYTIIKSMAFSEPAM 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L L+ A Y QI +G V+Q+FD+ AG L ++E +A +++ V+ K
Sbjct: 179 LHQFLGKLASAIATYACYQIDSGAQVVQMFDSWAGQLSPQDYETFALPYQQQVVKQVKAK 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+P+ I + G+ +L+ + + + I +DW+V ++ A + VQGN+DP L
Sbjct: 239 HPDTPLILYINGSAGILERMGK-SGVDMISVDWTVDMAEARNRIGHHLGVQGNIDPCVLF 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D + + G+ I NLGHG+ + +NV +T +
Sbjct: 298 GSKDTIRDRILETIRKAGNRGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|300866848|ref|ZP_07111525.1| Uroporphyrinogen decarboxylase [Oscillatoria sp. PCC 6506]
gi|300335158|emb|CBN56685.1| Uroporphyrinogen decarboxylase [Oscillatoria sp. PCC 6506]
Length = 351
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 105/342 (30%), Positives = 175/342 (51%), Gaps = 2/342 (0%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L +G V+ PP+W+MRQAGRY+ YR +R K+ +F D + VE++LQ
Sbjct: 4 STQVPLLLRAARGEVLERPPVWMMRQAGRYMKAYRDLRDKYPSFRDRSEKTDIAVEISLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P R + D ILFSDIL +G N VE+ GP +DP + + L
Sbjct: 64 PFRAFEPDGVILFSDILTPLPGIGINFDIVESRGPMIDPPIRSVEQIEKLHPLEPAESLP 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
I + + LR+++ + T++GF GAPWT+A+Y I G KD+ + A+ + L
Sbjct: 124 FIREILQTLRQEVGDRSTVLGFVGAPWTLAAYAIEGKSSKDYTVIKGMAFSEPAMLHQFL 183
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V+ +P+
Sbjct: 184 SKLADAIAIYVRYQIDCGAQVVQMFDSWAGQLSPQDYETFALPYQRQVVEQVKATHPDTP 243
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I + G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L
Sbjct: 244 LILYINGSAGLLERMPK-SGVDLVSVDWTVDMAEARARLGSKVGVQGNIDPCVLFGSKDF 302
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + + G+ I NLGHG+ +NV KT +
Sbjct: 303 IRERILETIRKAGNKGHILNLGHGVLQNTPEENVAFFFKTAK 344
>gi|156369798|ref|XP_001628161.1| predicted protein [Nematostella vectensis]
gi|156215130|gb|EDO36098.1| predicted protein [Nematostella vectensis]
Length = 371
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 5/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQP 62
+ +IL +G ++ P+W+MRQAGRYLPE+R+ +++ +F + TPE ELTLQP
Sbjct: 14 QNDRILRAAKGESVDRVPVWVMRQAGRYLPEFRKFKEENGADFFKIVQTPEMACELTLQP 73
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
IRRY+ DAAI+FSDILVI LG V V +GP +P+ L
Sbjct: 74 IRRYDLDAAIIFSDILVIPQVLGMTVEMVPGKGPHFPEPLNDPSDIEKLNQNANISEGLG 133
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++++I++ R KL + L GF GAPWT+ SYMI GG + ++R + Y + A + LL
Sbjct: 134 YVYRAITLTRHKLEGKVPLFGFTGAPWTLMSYMIEGGGSTNFTKSRKWLYAHMEASSKLL 193
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PN 239
L+D E+L+ Q AG ++Q+F++H G LG F ++ + +I V+ K
Sbjct: 194 QILTDAVVEHLVLQARAGAQILQVFESHGGLLGHDMFMLFSLPYLRQIAEKVKEKLGPDA 253
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
FAKGA Y +K + + + LDW++ A + +QGNLDP L ++
Sbjct: 254 VPMTVFAKGAHYAIKELSQ-CGYDVVSLDWTMSSKEARIVAPTVTLQGNLDPAALYGSHE 312
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ V ++ G +I NLGHG+ P DP + + TV S
Sbjct: 313 DIVYAVKGMVRGFGIQRYIANLGHGMHPDHDPDKLKTFIDTVHSYS 358
>gi|209523447|ref|ZP_03272002.1| uroporphyrinogen decarboxylase [Arthrospira maxima CS-328]
gi|209496189|gb|EDZ96489.1| uroporphyrinogen decarboxylase [Arthrospira maxima CS-328]
Length = 354
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 110/347 (31%), Positives = 183/347 (52%), Gaps = 8/347 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + Q +L +G V++ PP+W+MRQAGRY+ YR +R+++ +F D + VE+
Sbjct: 1 MTDSTQTPYLLRAARGEVLDRPPVWMMRQAGRYMKAYRDLREQYPSFRDRSEKTDIAVEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLF 116
+LQP R + D ILFSDIL +G + VE++GP +DP T +I L+P
Sbjct: 61 SLQPFRAFAPDGVILFSDILTPLPGIGIDFDIVESKGPIIDPPIRTQSQIDQLHPIEPEA 120
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L I + + LR+++ N ++GF GAPWT+A+Y I G KD+ + A+
Sbjct: 121 S--LPFIREILQTLRREVANKAAVLGFVGAPWTLAAYAIEGKSSKDYTIIKSMAFSEPAM 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L L+ A Y QI +G V+Q+FD+ AG L +FE +A +++ V+ K
Sbjct: 179 LHQFLGKLASAIATYACYQIDSGAQVVQMFDSWAGQLSPQDFETFALPYQQQVVKQVKAK 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+P+ I + G+ +L+ + + + I +DW+V ++ A + VQGN+DP L
Sbjct: 239 HPDTPLILYINGSAGILERMGK-SGVDLISVDWTVDMAEARNRIGHHLGVQGNIDPCVLF 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + D + + G+ I NLGHG+ + +NV +T +
Sbjct: 298 GSKETIRDRILETIRKAGNQGHILNLGHGVLQKTPEENVAYFFETAK 344
>gi|78776833|ref|YP_393148.1| uroporphyrinogen decarboxylase [Sulfurimonas denitrificans DSM
1251]
gi|123550610|sp|Q30SW8|DCUP_SULDN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78497373|gb|ABB43913.1| Uroporphyrinogen decarboxylase HemE [Sulfurimonas denitrificans DSM
1251]
Length = 343
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 118/337 (35%), Positives = 187/337 (55%), Gaps = 5/337 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++R + NFL++C+ P+ E+TLQP+
Sbjct: 5 FVDACFGKETPYTPVWMMRQAGRYLPEYMRVRAEAGNFLNLCHDPKKACEVTLQPVDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G +++FV EGP+ D PI + D + L ++ +
Sbjct: 65 VDAAILFSDILVVPLEMGMDLKFVTGEGPKFDDPIKNEADLDRLFGGDEAASKLTYVYDT 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +++++L LIGF GAPWT+A+YMI G K + + Y N + + +L +++
Sbjct: 125 IKLIKEQLAEDKALIGFTGAPWTLATYMIEGEGTKTYNICKKMMYSNPKLLHKILSKVTE 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y+ QI AG+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F
Sbjct: 185 VVKFYMEKQIEAGIDVVQIFDSWAAAIEPSKYDEFSWKYMVEIADYLKAKYPHIPIIMFP 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS P+ A E L + +QGN++P RL + + V
Sbjct: 245 KGIPAFLD--KVYGNFEVFGVDWSTPMDLAKEKLGERYVLQGNMEPCRLY-SKEETTESV 301
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+I ++G IFNLGHGI P V +N +K
Sbjct: 302 ESIQKIMGGKRHIFNLGHGILPDVPVENAKHFIKECH 338
>gi|154245770|ref|YP_001416728.1| uroporphyrinogen decarboxylase [Xanthobacter autotrophicus Py2]
gi|154159855|gb|ABS67071.1| uroporphyrinogen decarboxylase [Xanthobacter autotrophicus Py2]
Length = 348
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 151/344 (43%), Positives = 206/344 (59%), Gaps = 2/344 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
E + L VL G ++PPP+W+MRQAGRYLPEYR +R + +FL +CYTP+ E+TLQP
Sbjct: 6 ETRSPFLRVLDGTPLDPPPLWMMRQAGRYLPEYRAVRAEAGDFLTLCYTPKLAAEVTLQP 65
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
IRRY FDAAI+FSDILV+ ALG + F EGPR+ P+T Q + L + + P
Sbjct: 66 IRRYGFDAAIIFSDILVVPHALGVGLTFEAGEGPRLTPVTDQAGVAALSDR-LDPDKVDP 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++++I+ +R LP + LIGFCGAPWTVA+YM++G D R+ A ++ F L+D
Sbjct: 125 VYEAIASVRATLPAEVALIGFCGAPWTVATYMVAGHGTDDQAPARMLALRDEALFQSLID 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + S +L Q+ AG DV+QIFDT AG L FE + A + RI++ ++ +P+ +
Sbjct: 185 RLVEASIVHLAGQVAAGADVVQIFDTWAGVLDPSSFERWCAEPLRRIVAGLKALHPHVRV 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I+F KGA T NAIGLDWS A L +QGNLDP+RL+ G +
Sbjct: 245 IAFPKGATLEALERLADTGINAIGLDWSADRQAARRRLSGRVALQGNLDPLRLIAGGAAL 304
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D V I D IFNLGHGI P+ +V LV+ VR +
Sbjct: 305 EDEVARIRDDFSGARHIFNLGHGIRPETPLDHVEKLVEAVRRAR 348
>gi|163796505|ref|ZP_02190465.1| uroporphyrinogen decarboxylase [alpha proteobacterium BAL199]
gi|159178355|gb|EDP62899.1| uroporphyrinogen decarboxylase [alpha proteobacterium BAL199]
Length = 340
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 1/340 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L L G ++ PP+W+MRQAGRYLPEYR++R + +F+D+C +PE E+TLQPI
Sbjct: 2 TQSLLLRALAGETLDTPPLWMMRQAGRYLPEYRELRARAGSFVDLCLSPEMAAEVTLQPI 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY FDAAILFSDIL++ LGR++RF E GP ++PI + + + D F+ L PI
Sbjct: 62 RRYGFDAAILFSDILMVPYGLGRSLRFEEGRGPILEPIKDRS-GIPVLDPDTFIARLAPI 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ +R L LIGF GAPWTVASYM+ GG +D +++AY + F+ L+D
Sbjct: 121 CETVARVRSALGPETALIGFAGAPWTVASYMVEGGSSQDFAALKLWAYSDPDGFSVLMDT 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D + YL QI AG V+++FD+ AG E FE + + I+ + +P+ I
Sbjct: 181 LVDATVLYLDQQIRAGSQVVKLFDSWAGAAPESLFEKWVVQPTAAIVRRLATLHPDIPII 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
FA+GAG M + Y T A+ LD +PL+ A LQ E PVQGNLDP+ LV G +
Sbjct: 241 GFARGAGVMTRGYGAATGVTALALDSGIPLAMACALQAERPVQGNLDPIALVAGGDALAA 300
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD L GPF+FNLGHGI P +V LV VR
Sbjct: 301 ETDRILDALSGGPFVFNLGHGILPHTPLAHVEALVARVRG 340
>gi|255559645|ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
gi|223539973|gb|EEF41551.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
Length = 389
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 104/341 (30%), Positives = 176/341 (51%), Gaps = 4/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQP
Sbjct: 48 EPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWN 107
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL + V+ +GP +P+ T E + + +
Sbjct: 108 VFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPLRTAEDVDQVREF-VPEESVPYV 166
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+S++ILRK++ N ++GF GAP+T+ASY + GG K + + A+ + LL
Sbjct: 167 GESLTILRKEVDNKAAVLGFVGAPFTLASYCVEGGSSKHFSKIKRLAFSQPEVLHALLQK 226
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ A+Y+ Q G +QIFD+ A L +FE ++ + +I+ V++ +PN I
Sbjct: 227 FATSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEQFSLPYLKQIVDTVKKTHPNLPLI 286
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ LT + + LDW+V ++ L + VQGN+DP L + +
Sbjct: 287 LYASGSGGLLERLA-LTGVDVVSLDWTVDMAEGRRRLGPDMAVQGNVDPGVLFGSKEFIT 345
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +N ++ G G I NLGHGI +NV + +
Sbjct: 346 NRINDVVRKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKG 386
>gi|56750472|ref|YP_171173.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 6301]
gi|81299895|ref|YP_400103.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
gi|231982|sp|P16891|DCUP_SYNE7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81676942|sp|Q5N4W6|DCUP_SYNP6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|48040|emb|CAA77766.1| putative uroporphyrinogen decarboxylase [Synechococcus elongatus
PCC 7942]
gi|56685431|dbj|BAD78653.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 6301]
gi|81168776|gb|ABB57116.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
Length = 354
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 109/346 (31%), Positives = 180/346 (52%), Gaps = 8/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++L +G V++ PP+W+MRQAGRY+ YR +R K+ F + TPE +E++LQ
Sbjct: 4 SSSLPRLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLL--NPNIDLFLN 118
P R + D ILFSDIL +G +E++GP ++P I T E + + +
Sbjct: 64 PFRAFKPDGVILFSDILTPLPGMGIPFDIIESKGPILEPPIRTAEQVAAVHDLDPEEATP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ PI ++ LR+++ N ++GF GAPWT+A+Y I G K + + A+ +
Sbjct: 124 FIRPILET---LRQEVGNEAAVLGFAGAPWTLAAYAIEGKSSKTYANIKHLAFSEPTILH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L+D A YL QI G V+Q+FD+ AG L +++ +A R+ V+ K+P
Sbjct: 181 ELLGKLADNIAIYLCHQIDCGAQVVQLFDSWAGQLSPIDYDTFALPYQQRVFQQVKAKHP 240
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
I + G+ +L+ + + + + +DW+V L A L + +QGN+DP L
Sbjct: 241 EVPLILYISGSAGVLERMGQ-SGCDIVSVDWTVDLLDARRRLGPDIGLQGNIDPGVLFGS 299
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D + + G+ I NLGHGI P N +T ++
Sbjct: 300 QDFIRDRILDTVRKAGNQRHILNLGHGILPGTPEDNARHFFETAKN 345
>gi|90422769|ref|YP_531139.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB18]
gi|90104783|gb|ABD86820.1| uroporphyrinogen decarboxylase [Rhodopseudomonas palustris BisB18]
Length = 325
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 150/325 (46%), Positives = 210/325 (64%), Gaps = 4/325 (1%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W+MRQAGRYLPEYR++R K FLD+C+ E+ E+TLQPIRR+ FDAAI+FSDILV+
Sbjct: 2 WMMRQAGRYLPEYREVRAKAGGFLDLCFNAEFAAEVTLQPIRRFGFDAAIIFSDILVVPY 61
Query: 83 ALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
ALGR VRF EGPR++P+ + + + L+ ID L+ L P+F ++ I+R++LP LI
Sbjct: 62 ALGRAVRFEVGEGPRLEPLDSPDKVGTLSKAID--LSKLQPVFDALKIVRRELPAETALI 119
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GFCG+P+TVA+YM++G D R AYQ+ AF ++D L + S YL+AQ+ AG +
Sbjct: 120 GFCGSPFTVATYMVAGHGTPDQAPARNMAYQHPGAFAKIIDVLVESSISYLLAQLDAGAE 179
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
V+QIFDT AG L EFE ++ RI+ VR+ P AK I F +GAG ML + T
Sbjct: 180 VLQIFDTWAGVLPPREFERWSIEPTRRIVEGVRKVKPGAKIIGFPRGAGAMLPAFVERTG 239
Query: 262 SNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ + +DW+ SF E +Q + VQGNLDP+ L+ G + + V+ +L+ G IFN
Sbjct: 240 VDGVSIDWTAEPSFVREKVQSKVVVQGNLDPLVLIAGGAALDEAVDDVLNSYSGGRHIFN 299
Query: 321 LGHGITPQVDPKNVLDLVKTVRSEK 345
LGHGI P+ +V ++K VR K
Sbjct: 300 LGHGIQPETPIAHVEQMIKRVRDYK 324
>gi|196008287|ref|XP_002114009.1| hypothetical protein TRIADDRAFT_27704 [Trichoplax adhaerens]
gi|190583028|gb|EDV23099.1| hypothetical protein TRIADDRAFT_27704 [Trichoplax adhaerens]
Length = 368
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 194/350 (55%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G P+W MRQAGRYLPE+R++R K F +C TP E+TLQPI
Sbjct: 18 KNDLILRAARGEYTEMIPVWAMRQAGRYLPEFREVRSK-HEFFTLCRTPSLACEVTLQPI 76
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNYLL 121
RR+N DA+I+FSDILVI ALG +V + +GP P+ +++ L ++D+ + L
Sbjct: 77 RRFNLDASIIFSDILVIPQALGMDVEMIPGKGPTFIRPLEHPKDLKELEHDVDVD-DKLG 135
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ +I++ R KL + LIGF G PWT+ +YMI GG + + + + Y+ + LL
Sbjct: 136 YVYDAITLTRHKLEGRVPLIGFAGGPWTLMAYMIEGGGSQTMSKAKQWLYRYEDESHQLL 195
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-- 239
L D++ ++L+ Q+ AG ++Q+F++HAG LG F Y+ + + I V+R+ +
Sbjct: 196 RLLVDITVKFLVGQVKAGAQLLQVFESHAGYLGRDLFNKYSLQYLRDICKNVKRELVDAK 255
Query: 240 ---AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I FA+GA Y L+ TD + I +DW++ A ++ + +QGNLDP L
Sbjct: 256 IDPVPMIVFARGAHYALQELAS-TDYDVISVDWTIDPKEARNKIGGQSTIQGNLDPCALY 314
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ G+ +I NLGHGI P V+P + V+ V +
Sbjct: 315 ANKA--KKLIGKMIAEFGTQRYIANLGHGIYPNVEPSQLDCFVECVHAYS 362
>gi|297823981|ref|XP_002879873.1| hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp.
lyrata]
gi|297325712|gb|EFH56132.1| hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 99/338 (29%), Positives = 174/338 (51%), Gaps = 4/338 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L ++G V++ PP+WLMRQAGRY+ Y+ + +K+ +F D + VE++LQP
Sbjct: 52 SEPLLLRAVKGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPW 111
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLP 122
+ + D ILFSDIL + V+ +GP +P + + +
Sbjct: 112 KVFKPDGVILFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVDQVREF-IPEESVPY 170
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ LR ++ N ++GF GAP+T++SY+I GG K+ Q + A+ + + LL
Sbjct: 171 VGEALRRLRNEVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKRLAFSQPKVLHALLQ 230
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ Y+ Q +G +QIFD+ A L +FE ++ + +I+ AV++ +PN
Sbjct: 231 KFTTSMITYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVEAVKQTHPNLPL 290
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I +A G+G +L+ R T + + LDW+V ++ L ++ VQGN+DP L + +
Sbjct: 291 ILYASGSGGLLERLAR-TGVDVVSLDWTVDMAEGRDRLGRDLAVQGNVDPGVLFGSKEFI 349
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
++ + G I NLGHGI +NV +
Sbjct: 350 TSRIHDTVKKAGRDKHILNLGHGIKVGTPEENVAHFFE 387
>gi|95928216|ref|ZP_01310964.1| uroporphyrinogen decarboxylase [Desulfuromonas acetoxidans DSM 684]
gi|95135487|gb|EAT17138.1| uroporphyrinogen decarboxylase [Desulfuromonas acetoxidans DSM 684]
Length = 345
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 183/346 (52%), Gaps = 10/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELT 59
M L+ G ++ P+WLMRQAGRYLP+YR++R + FLD+C PE E+T
Sbjct: 1 MATEYD-FLKACWGQPVDRIPVWLMRQAGRYLPQYREVRSRGEGTFLDLCKDPERAAEVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QPI + DAAILFSDIL + +G ++ F N GP +PI TQ +
Sbjct: 60 IQPIDILDADAAILFSDILTPIEPMGMDLDF--NPGPVFANPIRTQADVDKLIVPENMAE 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + I LR + LIGF GAP+T+A YM+ G KD + Y + ++
Sbjct: 118 AVSYVPAIIKRLRTAFEGRVPLIGFGGAPFTLACYMVEGKGSKDFAALKQMMYGDPSLYH 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ ++++ YL QI AG IQIFDT G + H+FE + ++I+ + RK
Sbjct: 178 ALMEKITEMDRRYLNMQIEAGAQAIQIFDTWGGLVAPHDFEKFVLPYTKKLIAGLNRK-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I F K +G ML+ + S+ IGLDW V L A + L ++ VQGNLDP L
Sbjct: 236 DIPVIYFVKNSGTMLE-LVKEAGSDVIGLDWHVNLGKARDILGEDVAVQGNLDPTVLFAP 294
Query: 298 NQVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V ILD G FIFNLGHGI P V P+N + +V V
Sbjct: 295 KPYIEKEVQRILDENAGRPGFIFNLGHGIMPTVPPENAIFMVDAVH 340
>gi|302768601|ref|XP_002967720.1| hypothetical protein SELMODRAFT_408952 [Selaginella moellendorffii]
gi|300164458|gb|EFJ31067.1| hypothetical protein SELMODRAFT_408952 [Selaginella moellendorffii]
Length = 384
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 98/337 (29%), Positives = 172/337 (51%), Gaps = 4/337 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L ++G+ + PP+W+MRQAGRY+ Y+ + K+ +F + E +E++LQP +
Sbjct: 43 DPLLLRAVRGDSVERPPVWMMRQAGRYMKSYQDLCAKYPSFRERSENAELAIEISLQPWK 102
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL + + +GP + PIT+ + + +
Sbjct: 103 AFRPDGVILFSDILTPLTGMNIPFDILAGKGPVIHKPITSMADVDEVTEL-CPEEAVPYV 161
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++S LR ++ N ++GF GAP+T+ASY+I GG K + + A+ + + LL
Sbjct: 162 GQALSSLRAEVGNEAAVLGFVGAPFTLASYIIEGGSSKHFAKIKRLAFGSPEILHALLKK 221
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ Y+ Q G +QIFD+ A L +FE ++ + +I+S V++ +P+ I
Sbjct: 222 LAESIIIYVRYQADKGAQTVQIFDSWATHLSPIDFEQFSLPYLKQIVSEVKKTHPSLPLI 281
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ + + + +DW+V ++ A L ++ VQGN+DP L +
Sbjct: 282 LYASGSGGLLERLGS-SGVDIVSVDWTVDMAEARQRLGRDVAVQGNIDPGALFGSKDFIR 340
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
V + G G I NLGHG+ +NV +
Sbjct: 341 QRVIDTVAKAGRGKHILNLGHGVLVGTPEENVAHFFE 377
>gi|159903610|ref|YP_001550954.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9211]
gi|238056494|sp|A9BAY8|DCUP_PROM4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|159888786|gb|ABX09000.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9211]
Length = 351
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 105/345 (30%), Positives = 177/345 (51%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G ++ PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MTQSVPLLLRAARGENVDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP R + D ILFSDIL +G + VE++GP + DPI + +
Sbjct: 61 QPFRAFKPDGVILFSDILTPLPGMGIDFDIVESKGPLIKDPIRNESQIKTLRALSPS-ES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + + LR + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 120 CPFVGEVLKRLRDSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPELLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD +D A YL QI +G V+Q+FD+ AG L ++E +AA ++I V++ +P
Sbjct: 180 LLDHFADSIANYLCYQIDSGAQVVQMFDSWAGQLSPIDYETFAAPYQKKVIDLVKKTHPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I + G+ +L+ R T + + LDW+V ++ L + +QGN+DP L
Sbjct: 240 TPMILYISGSAGVLERMGR-TGVDIVSLDWTVDMAEGCARLPQNVGIQGNVDPGLLFGSP 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + + FI NLGHGI P +N + +S
Sbjct: 299 ESIRARIIDTVKKAKGRKFILNLGHGILPGTPEENARVFFEAGKS 343
>gi|213408919|ref|XP_002175230.1| uroporphyrinogen decarboxylase [Schizosaccharomyces japonicus
yFS275]
gi|212003277|gb|EEB08937.1| uroporphyrinogen decarboxylase [Schizosaccharomyces japonicus
yFS275]
Length = 353
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 184/350 (52%), Gaps = 12/350 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G + P+W+MRQAGRYLPEY ++R + F MC PE ELT+QP+
Sbjct: 3 NDLLLRAARGEPVERLPVWIMRQAGRYLPEYHKLRAE-STFFQMCQCPETASELTMQPVD 61
Query: 65 RYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
R+ DAAI+FSDILVI ALG +V +E +GP P+ T + + L
Sbjct: 62 RFAGLLDAAIIFSDILVIPQALGMHVEMLEGKGPHFPTPLNTPDDLKTLQKNPNISSILG 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +IS+ R +L N + L+GF GAPWT+ +YMI GG K + + + ++ A + LL
Sbjct: 122 YVMDAISLARTRLENRVPLLGFSGAPWTLMAYMIEGGGSKSFAKAKTWLFRYQEASHELL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-----K 236
L+ + YL+ Q+ AG ++QIFD+ AG L +F +A + I + V++ +
Sbjct: 182 KLLTKTISVYLVEQVKAGAQMLQIFDSWAGELSPRDFFEFAYPYLVEICNTVKKSLRECR 241
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNLDPMRL 294
I +AKGA Y L + + +GLDW + A+ ++ QGNLDP L
Sbjct: 242 IEPVPMIVYAKGAWYALDKLCD-SGYDVVGLDWLQDPAEAVRIRGNRRVTFQGNLDPSIL 300
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
++ + V +++ G +I NLGHGITP V ++V ++
Sbjct: 301 YGSHETIEQRVKEMIEAFGKKDYIINLGHGITPAVKVEDVRFFLEQCHKY 350
>gi|168033872|ref|XP_001769438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679358|gb|EDQ65807.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 99/345 (28%), Positives = 177/345 (51%), Gaps = 5/345 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+L ++G ++ PP+W+MRQAGRY+ Y+ + +K F + + VE++LQ
Sbjct: 66 TSSDPLLLRAVRGEEVDRPPVWMMRQAGRYMKVYQDLCQKHPTFRERSENVDLAVEISLQ 125
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P R + D ILFSDIL + ++ +GP + +PI T + + +
Sbjct: 126 PWRAFKPDGVILFSDILTPFTGMNIPFDILKTKGPIIHNPIRTAADVAKVREL-VPAEAV 184
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q+++ LR+++ N T++GF GAP+T+ASY++ GG K + A++ + L
Sbjct: 185 PYVGQALTALREEVGNASTVLGFVGAPFTLASYIVEGGSSKHFTVIKRMAFETPEVLHSL 244
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L++ Y+ Q G +QIFD+ A L +FE ++ + +I+SAV+ +P+
Sbjct: 245 LQKLAESVIIYVRYQADCGAQAVQIFDSWATHLSPVDFEVFSLPYIKQIVSAVKSTHPDL 304
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPV-QGNLDPMRLVVGN 298
I +A G+G +L+ T + + +DW+V ++ A + + V QGN+DP L
Sbjct: 305 PLILYASGSGGLLERMAS-TGVDVVSVDWTVDMAEARQRIGTQLAVQQGNMDPAALFGTK 363
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + G I NLGHG+ +NV +T +S
Sbjct: 364 EFIERRIHDTVAKAGRHKHILNLGHGVLVGTPEENVAHFFETGKS 408
>gi|119513565|ref|ZP_01632581.1| uroporphyrinogen decarboxylase [Nodularia spumigena CCY9414]
gi|119461779|gb|EAW42800.1| uroporphyrinogen decarboxylase [Nodularia spumigena CCY9414]
Length = 351
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 112/342 (32%), Positives = 185/342 (54%), Gaps = 8/342 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQP R +
Sbjct: 10 LLRAARGEVVDRPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQPWRAFA 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNP-NIDLFLNYLLPIF 124
D ILFSDI+ LG + E +GP ++ P+ +QE I L P + L ++ I
Sbjct: 70 PDGVILFSDIVTPLPGLGIEMDIAEGKGPIINSPLRSQEQIDRLRPLEPEASLPFIKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + + LL
Sbjct: 130 QA---LRQEVGNQSTVLGFVGAPWTLAAYAVEGKGSKTYSVIKNMAFSDPTILHQLLGKF 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A Y QI G V+Q+FD+ AG L +++ +A R+ V++ +P+ I
Sbjct: 187 ADAIAVYARYQIDCGAQVVQMFDSWAGQLSPQDYDTFALPYQQRVFQQVKQTHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
G+ +L+ + + ++ + +DW+V ++ A L K VQGNLDP L + D
Sbjct: 247 LVSGSAGVLERMPK-SGADIVTVDWAVDMAEARARLGKHVKVQGNLDPGVLFGSQDFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + G+ I NLGHG+ P+ +NV +T + K
Sbjct: 306 RILDTVHKAGNWGHILNLGHGVLPETPEENVAFFFETAKQLK 347
>gi|152990235|ref|YP_001355957.1| uroporphyrinogen decarboxylase [Nitratiruptor sp. SB155-2]
gi|166234263|sp|A6Q291|DCUP_NITSB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|151422096|dbj|BAF69600.1| uroporphyrinogen decarboxylase [Nitratiruptor sp. SB155-2]
Length = 340
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 122/338 (36%), Positives = 186/338 (55%), Gaps = 8/338 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++R K +FL +C P+ E+TLQP+ +
Sbjct: 3 FIDACFRKKTPYTPIWMMRQAGRYLPEYMEVRNKAGDFLTLCKNPKMAAEVTLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI +G ++RF + EGP P+ T E L + L ++++
Sbjct: 63 VDAAILFSDILVIPLEMGMDLRFEKGEGPVFSKPVRTWED--LGSLYEFPEEKLTYVYET 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I I+RKKLP LIGF GAPWT+A+YM+ G K + + Y + + L+ +++
Sbjct: 121 IKIVRKKLPKDKALIGFSGAPWTLATYMVEGSGSKTYAAIKKLIYTDPEFMHALMIKITE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL+ QI +GV+ +QIFD+ A L + +F ++ + I ++ +YP I F
Sbjct: 181 AVKAYLVKQIESGVNAVQIFDSWASALEKEKFFEFSWDYMVDIAEFLKERYPEIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DW P+ A E L + +QGN++P RL + +GV
Sbjct: 241 KGIAGYLDDI--YGKFDVFGVDWGTPIDLAKEKLGNKYVLQGNMEPTRLY-SKEATKEGV 297
Query: 306 NAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
I++V+G+ IFNLGHG+ P + +N LV+ V
Sbjct: 298 EKIVEVMGAKEGHIFNLGHGMLPDLPVENAKYLVELVH 335
>gi|319650143|ref|ZP_08004292.1| uroporphyrinogen decarboxylase [Bacillus sp. 2_A_57_CT2]
gi|317398324|gb|EFV79013.1| uroporphyrinogen decarboxylase [Bacillus sp. 2_A_57_CT2]
Length = 348
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 115/346 (33%), Positives = 184/346 (53%), Gaps = 8/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L+ +G + P+W MRQAGR PEYR I++K+ + ++ + PE +T
Sbjct: 3 NSFNDTFLKAARGEQTDYVPVWYMRQAGRSQPEYRAIKEKY-SLFEITHQPELCAYVTRL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ +YN DAAIL+ DI+ ALG +V GP + +PI + I+ +
Sbjct: 62 PVEQYNNDAAILYKDIMSPLPALGVDVEIKSGIGPVISNPIRSIADVEKLGEINPE-EDV 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +L K+ + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L
Sbjct: 121 PYVLETIKLLTKE-QLTVPLIGFAGAPFTIASYMIEGGPSKNYNKTKAFMYAEPKAWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L +++ Y+ +Q+ AG IQIFD+ G L ++ + + RI SA++ + N
Sbjct: 180 MDKLGEMTITYVKSQVKAGAKAIQIFDSWVGALNVEDYRYFIKPVMNRIFSALKEE--NV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA ++ + L + +GLDW +P+ A VQGNLDP L+ +V
Sbjct: 238 PLIMFGVGASHLALEWHDLP-LDVVGLDWRLPIQEARAKGITKTVQGNLDPAILLAPWEV 296
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + AILD + +IFNLGHG+ P+V+P + L +
Sbjct: 297 IEERAKAILDQGMAKPGYIFNLGHGVFPEVNPDTLKKLTAFIHEYS 342
>gi|297203087|ref|ZP_06920484.1| uroporphyrinogen decarboxylase [Streptomyces sviceus ATCC 29083]
gi|197712085|gb|EDY56119.1| uroporphyrinogen decarboxylase [Streptomyces sviceus ATCC 29083]
Length = 351
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 114/343 (33%), Positives = 180/343 (52%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ + + P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+R
Sbjct: 13 ESAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIP-MLESCARPELVAEITLQPVR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+N DAAI +SDI+V A+G ++ GP ++ PI T+ L DL + +
Sbjct: 72 RHNVDAAIYYSDIVVPLKAIGIDLDIKPGVGPVVEHPIRTRAD--LAQLRDLTPEDVSYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++L LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 130 TEAIGLLTRELGP-TPLIGFAGAPFTLASYLVEGGPSRTYENAKSMMYGDPELWADLLDR 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++A +L QI AG +Q+FD+ AG L ++ + ++ AV + I
Sbjct: 189 LAEITAAFLKVQIEAGASAVQLFDSWAGALAPADYRRSVLPASAKVFKAV--EGYGVPRI 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L+ ++ +G+DW VPL A + +QGNLDP L + +
Sbjct: 247 HFGVGTGELLQLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPTVLFASTEAVE 305
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD G +FNLGHG+ P DP + LV+ V +
Sbjct: 306 AKTREVLDSAEGLEGHVFNLGHGVMPSTDPDALTRLVEYVHTH 348
>gi|283954803|ref|ZP_06372319.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
414]
gi|283793643|gb|EFC32396.1| uroporphyrinogen decarboxylase [Campylobacter jejuni subsp. jejuni
414]
Length = 340
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 123/340 (36%), Positives = 184/340 (54%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYLPEY ++RK+ +FL +C + E++LQPI +
Sbjct: 3 FIDSCFKKPTPYTPIWMMRQAGRYLPEYMEVRKQAGDFLSLCKDYKKASEVSLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILVI +G N+RF + EGP +PI+T E + L ++ +
Sbjct: 63 VDAAIIFSDILVIPLEMGMNLRFEKGEGPVFDNPISTLEDLE-KLDDQNAHKKLNYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + R+KL LIGFCG+PWT+A+YMI G K++ + + YQN + +L L+
Sbjct: 122 LKLTREKLSQEKALIGFCGSPWTIATYMIEGSGSKNYAKCKKILYQNPELLHKILSKLTQ 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + +QIFD+ A L +F ++ + I + + KYPN I F
Sbjct: 182 VLKLYLEEQIKAGANAVQIFDSWASALEYDKFFEFSFNYMLEISNFTKNKYPNIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + +GV
Sbjct: 242 KGISGYLDKI--DGNFDVFGVDWSTPLDLARDKLSHKYTLQGNMEPCRLY-DKNAIKEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L + + IFNLGHGI P + +N +K V+
Sbjct: 299 EKVLKTMQNKAHIFNLGHGILPDIPIENAKYFIKLVQESS 338
>gi|285018935|ref|YP_003376646.1| uroporphyrinogen decarboxylase [Xanthomonas albilineans GPE PC73]
gi|283474153|emb|CBA16654.1| putative uroporphyrinogen decarboxylase protein [Xanthomonas
albilineans]
Length = 354
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 178/350 (50%), Gaps = 9/350 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ ++ P+WLMRQAGRYLPEYR R + +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRREPVDQTPVWLMRQAGRYLPEYRATRARAGSFLAMAKTPELACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL I DA+G + FVE EGP+ + + L +
Sbjct: 63 ARFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIAQLGVPDMETELRYV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++R++L + LIGF G+PWT+A YM+ GG ++ + + A + A + LL
Sbjct: 123 MDAVRVIRRELDGSVPLIGFSGSPWTLACYMVEGGGSDNYARIKAMALNDPTALHKLLSV 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
+D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 183 NTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLQRIAGELARGDGAERTP 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
I F KG L+ + + +G+DW++ L A +QGNLDP L +
Sbjct: 243 LILFGKGNAPYLEELAA-SGAEGVGVDWTIDLADAARRTGGRVALQGNLDPAVLYGAPEA 301
Query: 301 MIDGVNAILDVLGSG-----PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L G +FNLGHG++P + P++V L+ V+
Sbjct: 302 IERQVQRVLHSYAEGNGSPDGHVFNLGHGLSPDMQPEHVGALIAAVQRHS 351
>gi|297573433|gb|ADI46567.1| uroporphyrinogen decarboxylase [Vaucheria litorea]
Length = 342
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 103/343 (30%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP
Sbjct: 1 KDPLLLRAARGEAVERVPVWMMRQAGRHMQEYRDLVKKYPTFRERSEIHEVSTEISLQPY 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY D ILFSDIL +G + + E GP++ P+ T E ID +
Sbjct: 61 RRYGTDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTIDSE-KACPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L
Sbjct: 120 GQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D +Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I
Sbjct: 180 IADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPII 239
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+ +G +L+ + + ++ I LDW+V + A + + +QGNLDP L N+V+
Sbjct: 240 IYINKSGALLERMSQ-SGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIK 298
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G + NLGHGI + + TV++ +
Sbjct: 299 ERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFR 341
>gi|2501647|sp|Q42967|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
Short=UPD; Short=URO-D; Flags: Precursor
gi|1009429|emb|CAA58040.1| uroporphyrinogen decarboxylase [Nicotiana tabacum]
Length = 391
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 101/344 (29%), Positives = 178/344 (51%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L+ ++G + PP+WLMRQAGRY+ Y+ + +K+ F D + VE++LQ
Sbjct: 47 NATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQ 106
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + ++ +GP DP+ T + +
Sbjct: 107 PWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREF-IPEKSV 165
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+ + + L
Sbjct: 166 PYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHAL 225
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ +V+ +PN
Sbjct: 226 LQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNL 285
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L +QGN+DP L +
Sbjct: 286 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKE 344
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +N + G G I NLGHGI +N + +
Sbjct: 345 FITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKG 388
>gi|166711165|ref|ZP_02242372.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 354
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 187/349 (53%), Gaps = 12/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLGMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--PNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYREFSLPYLTRIARELERGEGPERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V+ LD G +FNLGHG++P ++P++V LV+ V+
Sbjct: 301 AIRTEVSKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|307171917|gb|EFN63554.1| Uroporphyrinogen decarboxylase [Camponotus floridanus]
Length = 356
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 192/350 (54%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G ++ P+W+MRQAGRYLPE++++R ++ +F +C TPE ++TLQPI
Sbjct: 10 KNDRVLRAARGEPVDRVPVWVMRQAGRYLPEFQEVRARY-DFFAICQTPELACQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V V GP + P+ + L+ PN+ L Y
Sbjct: 69 ERFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLADPSDLARLVRPNVQEALGY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 128 --VGDAITLTRHKLDGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YL+ Q+ AG ++Q+F+++ L + F Y+ + + +I VR++
Sbjct: 186 LQMITDVIVDYLVMQVKAGAQLLQVFESNGDYLDDALFTTYSFKYLKQISERVRKQLKEA 245
Query: 238 --PNAKFISFAKGAG-YMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMR 293
P I+F KGA LK + IGLDW+V A +L + +QGN+DP
Sbjct: 246 NIPEVPMIAFPKGATVNSLKILAKDKSYEVIGLDWTVDPVEARKQLGPDVTLQGNMDPCA 305
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L ++D + ++ G +I NLGHGI P ++ +K V S
Sbjct: 306 LYSPQDKIVDRAHKMISNFGKTRYIANLGHGILPDTPILSMEAFIKGVHS 355
>gi|315044081|ref|XP_003171416.1| uroporphyrinogen decarboxylase [Arthroderma gypseum CBS 118893]
gi|311343759|gb|EFR02962.1| uroporphyrinogen decarboxylase [Arthroderma gypseum CBS 118893]
Length = 364
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 184/353 (52%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGENVERPPIWIMRQAGRYLPEYHEAK-GNRDFFECCRSPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V ++ +GP +P+ T E ++ ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPNPLRTPEDEQYTQVMNRTVDVT 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 128 KELGYVYEAITLTRQKLEGRVPLIGFIGAPWTLLCYMVEGGGSKMFAAIKTWVYKYPDAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL +S+V E+L Q+ AG ++Q+FD+ AG L F ++ + I + + ++
Sbjct: 188 KKLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFAEFSLPYLRYISANLPKRL 247
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L + N +GLDW + A + +QGN DP
Sbjct: 248 QEMGLEVVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDAAKARAVANGRVVLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHG+TP V P ++ + +R
Sbjct: 307 GCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIR 359
>gi|154174765|ref|YP_001408740.1| uroporphyrinogen decarboxylase [Campylobacter curvus 525.92]
gi|166234239|sp|A7GZU8|DCUP_CAMC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|112802635|gb|EAT99979.1| uroporphyrinogen decarboxylase [Campylobacter curvus 525.92]
Length = 342
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 185/339 (54%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY +R++ +FL +C + +T+QP+
Sbjct: 3 FVDACLKKPTPYTPVWMMRQAGRYLPEYMAVRERAGDFLSLCKDYKKASAVTIQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G +RF + EGP D L ++D + L ++ +I
Sbjct: 63 VDAAILFSDILVVPLEMGMGLRFEKGEGPVFDRPVKTAGDLAVLDVDRAVKNLSYVYDTI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++ R+ L LIGFCGAPWT+A+YMI GG K + + Y N + +L ++
Sbjct: 123 ALTRENLARDKALIGFCGAPWTIATYMIEGGGTKTYAVCKKLLYTNPEFLHQILAKVTAA 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+Y+ AQI AGVD +QIFD+ AG L E + + R + +I+ +V+ ++P+ I F K
Sbjct: 183 LTDYVKAQIRAGVDAVQIFDSWAGALEESAYFEFGWRYILQIVDSVKTEFPDIPLIVFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + G+DWS P+ A E L + +QGN++P RL + + GV+
Sbjct: 243 GVSGFLDKIS--GNFEVFGVDWSTPIGLAKEKLSPKFVLQGNMEPTRLY-SKKAIDAGVD 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+ + P IFNLGHGI P + +N +K V+ +
Sbjct: 300 KILNTMKGAPHIFNLGHGILPDIPVENAKYFIKQVQEKS 338
>gi|221128019|ref|XP_002154761.1| PREDICTED: similar to Uroporphyrinogen decarboxylase [Hydra
magnipapillata]
Length = 391
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 128/366 (34%), Positives = 179/366 (48%), Gaps = 25/366 (6%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L+ P+WLMRQAGRYLPEY R K +F+ + EY E+TLQ
Sbjct: 24 SLHNPTFLQACMRQATAHTPLWLMRQAGRYLPEYVATRAKAGSFMGLATNTEYATEVTLQ 83
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ RY DAAILFSDIL + DA+G + F + EGPR PI T+ D + L
Sbjct: 84 PLERYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFASPIKTEADVAKLEVPD--MAKL 141
Query: 121 LPIFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+F ++S +RK L + LIGF G+PWT+A YM+ G D+ + Y
Sbjct: 142 QYVFDAVSSIRKALTVDGKGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTMMYSRPDL 201
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +L +D A YL AQI AG + +FD+ G L + F+ ++ R++ ++R
Sbjct: 202 MHRMLAINADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLKQLKRF 261
Query: 237 YPN---AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQG 287
+ I F KG G L++ + L D +GLDW+V L+ A L +QG
Sbjct: 262 GTDGKVVPRIVFTKGGGLWLQDMQAL-DCEVLGLDWTVNLAKARALVGGIENGPGKALQG 320
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGS-------GP-FIFNLGHGITPQVDPKNVLDLVK 339
N+DP L + V +LD G GP IFNLGHGI+ P +V LV
Sbjct: 321 NIDPNVLFAPPAAIETEVAKVLDSFGKPFQGSGTGPTHIFNLGHGISQYTPPDHVAALVA 380
Query: 340 TVRSEK 345
V S
Sbjct: 381 AVHSHS 386
>gi|332030423|gb|EGI70111.1| Uroporphyrinogen decarboxylase [Acromyrmex echinatior]
Length = 377
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL+ +G ++ P+W+MRQAGRYLPE++++R + +F +C TPE ++TLQPI
Sbjct: 31 KNDRILKATRGEPVDRIPVWVMRQAGRYLPEFQEVRAQ-HDFFTVCQTPELACQVTLQPI 89
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V GP + P+T L+ PN++ L Y
Sbjct: 90 ERFDLDASIIFSDILVIPQAMGLKVEMAPGVGPVLPQPLTGPNDLSRLIRPNVNETLKY- 148
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 149 --VGDAITLTRHKLNGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDTHTL 206
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YL+ Q+ AG ++Q+F+++ L + F NY+ + + +I VR++
Sbjct: 207 LQMITDVIVDYLVMQVKAGAQLLQVFESNGNYLDDALFTNYSFKYLKQISERVRKQLKEA 266
Query: 238 --PNAKFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
P I+F KGA LK IGLDW+V A + L +QGN+DP
Sbjct: 267 NIPEVPMIAFPKGATMNSLKILAMDQSYEVIGLDWTVDPIEARKQLGANVTLQGNMDPCA 326
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +ID ++ G +I NLGHGI P ++ +K V S
Sbjct: 327 MYFSQDEIIDRAQKMVSNFGKTRYIANLGHGILPDTPISSMEAFIKGVHS 376
>gi|113953768|ref|YP_731091.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9311]
gi|122945623|sp|Q0I8Y1|DCUP_SYNS3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|113881119|gb|ABI46077.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9311]
Length = 351
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 105/343 (30%), Positives = 179/343 (52%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E +L +G + PP+W+MRQAGRY+ YR +R + +F + P+ + E+++
Sbjct: 1 MSETLPLLLRAARGETVERPPVWMMRQAGRYMKVYRDLRDRHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLN 118
QP + + D ILFSDIL +G VE++GP++ DPI + ++ L P
Sbjct: 61 QPFKAFQPDGVILFSDILTPLPGMGIEFDIVESKGPQIGDPIRSLSQVEALRPLQPE--E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 119 SMPFVGEVLGRLRSSVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKKMAFQEPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD + A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFATSIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +L+ R T + I LDW+V ++ L VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVLERMGR-TGVDIISLDWTVDMAEGLARLPDHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + D ++ + I NLGHGI P +N +
Sbjct: 298 PEAIRDRIDDCVRKARGRRHILNLGHGILPGTPEENGRAFFEA 340
>gi|315636353|ref|ZP_07891602.1| uroporphyrinogen decarboxylase [Arcobacter butzleri JV22]
gi|315479332|gb|EFU70016.1| uroporphyrinogen decarboxylase [Arcobacter butzleri JV22]
Length = 346
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 120/337 (35%), Positives = 189/337 (56%), Gaps = 3/337 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R K NFL++C+ PE E+T+QP+
Sbjct: 5 FVDACFRKETPYTPVWMMRQAGRYLPEYMEVRAKAGNFLNLCHNPELAAEVTIQPLDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ + +G + F++ EGP D PI T+ + N L ++++
Sbjct: 65 VDAAILFSDILVVPNEMGMKLDFLKGEGPVFDKPIKTEADLDALIGGEEAANKLTYVYET 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I IL+++LP LIGF GAPWT+A+YMI G K + + Y N + +L ++D
Sbjct: 125 IKILKQRLPQDKALIGFTGAPWTLATYMIEGQGTKTYNLCKKMMYSNPEFLHKILRQVTD 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y+ QI +GVDV+QIFD+ A + +++ ++ + + I ++ KYP+ I F
Sbjct: 185 VVKFYMEKQIQSGVDVVQIFDSWAAAIEPSKYDEFSWKYMVEIAEYLKEKYPHIPVIMFP 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG ++ + + G+DW P++ A E L ++ +QGN++P RL + V
Sbjct: 245 KGIAAFIERGLVYGNFDVFGVDWGTPMALAKEKLGEKYVLQGNMEPCRLY-SKEATTMCV 303
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
I +++ IFNLGHGI P V +N + VK +
Sbjct: 304 EGIQNIMSGNGHIFNLGHGILPDVPVENAIHFVKECQ 340
>gi|260434883|ref|ZP_05788853.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8109]
gi|260412757|gb|EEX06053.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8109]
Length = 352
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 101/346 (29%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + + + L+P
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVDALHPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPEILH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +++ T + + LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVIERMAN-TGVDIVSLDWTVDMAEALARLPEHVGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N + +S
Sbjct: 298 PEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGEAFFRAGKS 343
>gi|209966067|ref|YP_002298982.1| uroporphyrinogen decarboxylase [Rhodospirillum centenum SW]
gi|209959533|gb|ACJ00170.1| uroporphyrinogen decarboxylase [Rhodospirillum centenum SW]
Length = 346
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 136/341 (39%), Positives = 195/341 (57%), Gaps = 4/341 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L L G PP WLMRQAGRYLPEYR++R + FLD+C P E+TLQP+RR
Sbjct: 7 KPFLRALAGETQTRPPFWLMRQAGRYLPEYREVRAQAGGFLDLCLKPALGCEVTLQPLRR 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y DAAILFSDIL++ ALG++V F E EGPR+ I + D P+++
Sbjct: 67 YGMDAAILFSDILLVPHALGQSVGFAEGEGPRLAAIRDMNGLRAL-DFDGLHRRAEPVYE 125
Query: 126 SISILRKKLPNHIT---LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ +R+ L LIGF G+PWTVA YM+ G K++ + +A+ + F L+D
Sbjct: 126 TVRRIRENLDKDFPTTALIGFAGSPWTVACYMVEGQGSKEYMHVKQWAFSDPEGFGQLID 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + EY+ AQI AG + +Q+FD+ AG L F + + I+ A+R ++P
Sbjct: 186 LLVRATVEYISAQIKAGAEAVQLFDSWAGALPVDGFHQWVIKPTRAIVDALRARHPGVPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F + AG L+ Y R T + + LD VP ++A E K +QGNLDP+ L+ G M
Sbjct: 246 IGFPRQAGLNLEAYVRETGVDGVSLDPGVPAAWASETLKGVTLQGNLDPVLLLTGGAAMR 305
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GV +L+ + PFIFNLGHGI + P++V +L + +R
Sbjct: 306 RGVTELLEAMSGRPFIFNLGHGILKETPPEHVAELTRLLRG 346
>gi|308810174|ref|XP_003082396.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116060864|emb|CAL57342.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 401
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 105/345 (30%), Positives = 178/345 (51%), Gaps = 4/345 (1%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +L ++G + PPIW+MRQAGRY+ Y+ + K+ F + T + VE++LQP
Sbjct: 58 DLDPLMLRAIRGEDVERPPIWMMRQAGRYMKVYQDLCKRHTTFRERSETVDLAVEISLQP 117
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLL 121
R + D ILFSDIL + V+ GP +P+ E N++ + +
Sbjct: 118 YRAFKPDGVILFSDILTPLQGMNIPFDIVKGTGPIIFNPVREMEDIKAITNLEPEKS-VP 176
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +S+ +LR ++ N TL+GFCGAP+T+ASY++ GG + + A+ + L+
Sbjct: 177 FVGESLKLLRSEIGNEATLLGFCGAPFTLASYIVEGGTSSHYKVIKKMAFDAPAVYEALM 236
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+D EY Q AG V+QIFD+ A +FE Y + RI++ ++ +P+
Sbjct: 237 NKLTDAVIEYTRYQADAGAQVVQIFDSWASEFSPADFEKYCLPYLQRIVAECKKTHPHVP 296
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I ++ G+G L+ T+++ + LD +V ++ A L VQGN+DP+ L
Sbjct: 297 LIIYSSGSGGFLERLA-TTNADVLSLDGTVDMADARRRLGANQAVQGNMDPVHLFASQDF 355
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ ++ G + NLGHG+ +NV +TVR +
Sbjct: 356 ITKKVHETIEKAGKSRHVMNLGHGVMVGTPEENVAHFFQTVRDYR 400
>gi|297573435|gb|ADI46568.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 342
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 103/343 (30%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP
Sbjct: 1 KDPLLLRAARGEAVERVPVWMMRQAGRHMQEYRDLIKKYPTFRERSEIHEVSTEISLQPY 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY D ILFSDIL +G + + E GP++ P+ T E ID +
Sbjct: 61 RRYGTDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTIDSE-KACPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L
Sbjct: 120 GQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D +Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I
Sbjct: 180 IADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDVFAAPYQKKVIQKIKSSHPEVPII 239
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+ +G +L+ + + ++ I LDW+V + A + + +QGNLDP L N+V+
Sbjct: 240 IYINKSGALLERMSQ-SGADIISLDWTVTIEEARKRIGNDIGIQGNLDPAALFAPNEVIK 298
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G + NLGHGI + + TV++ +
Sbjct: 299 ERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFR 341
>gi|78212551|ref|YP_381330.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9605]
gi|123756918|sp|Q3AKV7|DCUP_SYNSC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78197010|gb|ABB34775.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9605]
Length = 352
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 100/346 (28%), Positives = 183/346 (52%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + ++ L P
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPL--NPSE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + ++ +
Sbjct: 119 SMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMVFREPEILH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKKTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +++ T + + LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVIERMAN-TGVDIVSLDWTVDMAEALARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N + +S
Sbjct: 298 PEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGEAFFRAGKS 343
>gi|33866029|ref|NP_897588.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 8102]
gi|45476851|sp|Q7U645|DCUP_SYNPX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33639004|emb|CAE08010.1| Uroporphyrinogen decarboxylase (URO-D) [Synechococcus sp. WH 8102]
Length = 352
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + + + L P
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMDQVNALRPL--NPSE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLGRLRESVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIANYLRFQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +L+ T + I LDW+V + A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVLERMA-TTGVDIISLDWTVDMGEALARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + I NLGHGI P +N ++ +S
Sbjct: 298 PDAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|310815396|ref|YP_003963360.1| uroporphyrinogen decarboxylase [Ketogulonicigenium vulgare Y25]
gi|308754131|gb|ADO42060.1| uroporphyrinogen decarboxylase [Ketogulonicigenium vulgare Y25]
Length = 344
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 141/344 (40%), Positives = 205/344 (59%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K IL L G + PP W+MRQAGRYLPEYR R + +FL +CYTP+ E+TL
Sbjct: 1 MTLQK-PILRALAGETLPTPPAWMMRQAGRYLPEYRATRAEAGDFLSLCYTPDLAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY+FDAAILF+DIL++ ALG + F EGPR+ TT + D + L
Sbjct: 60 QPLRRYSFDAAILFADILLLPQALGAELWFTPGEGPRLSTTTTPDELSALKPADAVHDRL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI++++ IL ++LP + LIGF GAPWTVA+YMI+G D G ++ F+ +
Sbjct: 120 SPIYETVRILARELPKDVALIGFAGAPWTVATYMIAGRGTPDQGPAHALKTEDRATFDGI 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+ + EYL Q+ AG +VI++FD+ AG L +F Y+ R + I SA++ ++P
Sbjct: 180 IDLLTAGTIEYLSKQVEAGAEVIKLFDSWAGSLQGEDFARYSLRPMQEITSALKARFPGL 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I+F +GAG ++ I +D V ++A E +Q G VQGNL LV G
Sbjct: 240 PVIAFPRGAGNRYAGSHAAVGADCIAIDDGVTAAWAAEHVQPAGCVQGNLLNSHLVTGGD 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ ++ L GP IFNLGHGITP DP+NV +++ +++
Sbjct: 300 ALVTETQRVVRALRGGPHIFNLGHGITPDADPENVTIMLEAIKN 343
>gi|195056259|ref|XP_001995029.1| GH22930 [Drosophila grimshawi]
gi|193899235|gb|EDV98101.1| GH22930 [Drosophila grimshawi]
Length = 356
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 183/345 (53%), Gaps = 8/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR++ DA+I+FSDILVI ALG V GP + L D L+ L +
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPDDLKRLTPDGALSRLTYV 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I+++R KL + LIGF GAPWT+ YMI GG K + + + L+
Sbjct: 130 GDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTDYPEDTKLFLNL 189
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKYP 238
++DV +YL Q+ AG ++QIF++ A L + EF ++ + RI + + ++ P
Sbjct: 190 ITDVIVDYLEMQVMAGAQMLQIFESSAEHLSKEEFLVWSTPYLRRIRNDLVERLTKKAVP 249
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
FAKGAG+ LK L + I LD++V A ++ +QGNLDP +
Sbjct: 250 LVPLTIFAKGAGHSLKEQSEL-GYDVISLDYTVDPVEARAQVGPNITLQGNLDPQDMYRE 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ G +I NLGHGITPQ ++ LV V
Sbjct: 309 PGELRTLTTEMVHKFGKSRYIANLGHGITPQTPIVSMETLVDAVH 353
>gi|292397866|gb|ADE27973.1| uroporphyrinogen decarboxylase [Nylanderia nr. pubens LZ-2010]
Length = 356
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 193/350 (55%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G ++ PIW+MRQAGRYLPE++++R + +F +C TPE ++TLQPI
Sbjct: 10 KNDRVLRATRGEPVDRVPIWVMRQAGRYLPEFQEVRAQ-NDFFAVCQTPELACQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V V GP + P+ T + L PN++ L Y
Sbjct: 69 ERFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLVDPTDLVRLARPNVEEALKY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 128 --VRKAITLTRHKLDGRVPLIGFTGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YL+ Q+ AG ++Q+F+++ L + F Y+ + + +I VR++
Sbjct: 186 LQMITDVIVDYLVMQVKAGAQLLQVFESNGDYLDDALFTIYSFKYLKQISERVRKQLKEE 245
Query: 238 --PNAKFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMR 293
P I+F KGA LK + IGLDW+V A +L + +QGN+DP
Sbjct: 246 NIPEVPMIAFPKGATMNSLKILAKDKSYEVIGLDWTVDPVEARNQLGPDVTLQGNMDPCA 305
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +ID + ++ G +I NLGHGI P ++ +K V S
Sbjct: 306 MYSSQDEIIDRAHKMVSNFGKTRYIANLGHGILPDTPISSMEAFIKGVHS 355
>gi|94496599|ref|ZP_01303175.1| uroporphyrinogen decarboxylase [Sphingomonas sp. SKA58]
gi|94423959|gb|EAT08984.1| uroporphyrinogen decarboxylase [Sphingomonas sp. SKA58]
Length = 352
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 134/342 (39%), Positives = 202/342 (59%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L VL+G PP+WLMRQAGRYLPEYR++R FL++ Y E+TLQP+R
Sbjct: 11 DKKLLGVLRGERPAVPPVWLMRQAGRYLPEYRELRADKGGFLELVYDSAAAAEVTLQPLR 70
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPI 123
R+ FD AILFSDIL++ A+G+++ F EGPR+ PI ++ L P + +
Sbjct: 71 RFGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSALTPEW----SRFDAV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ ++ L ++T +GF G+PWT+A+YM++G KDHG R AY F L+D
Sbjct: 127 YDTVRRVKAALNPNVTFLGFAGSPWTIATYMVAGQGSKDHGAARRMAYCEPDRFAALIDA 186
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ D + YL QI GV+ +Q+FD+ +G L +FE + RI++A++ ++P+ I
Sbjct: 187 IIDATVTYLSGQIATGVEAVQLFDSWSGSLAPIQFERWVIDPNRRIVAALKERHPDVPVI 246
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F KGAG L +Y T +A+G+D ++ +A G PVQGNLDP+ L+ G + +
Sbjct: 247 GFPKGAGAKLADYAVQTGVDAVGVDETIDPHWAHGALPAGMPVQGNLDPLALIAGGRAVE 306
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V+AI P IFNLGHGI P +V L+ VR +
Sbjct: 307 EAVDAIRAAFADRPHIFNLGHGILPDTPIAHVEALLSYVRQQ 348
>gi|194477307|ref|YP_002049486.1| uroporphyrinogen decarboxylase [Paulinella chromatophora]
gi|171192314|gb|ACB43276.1| uroporphyrinogen decarboxylase [Paulinella chromatophora]
Length = 355
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 2/341 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R F + PE + E+++
Sbjct: 1 MAETLPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDLHPGFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP + D ILFSDIL +G N VE++GP ++P + + N L
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGIGVNFDIVESKGPLIEPAIRTDSQVKNLKTLYPEKSL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I + ++ LR+ + + T++GF GAPWT+A+YM+ G K++ + A+Q + L
Sbjct: 121 PYIGEVLTRLRQSVGDQATVLGFVGAPWTLAAYMVEGKSSKNYAIIKAMAFQEPDLLHRL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ LSD A Y+ QI G V+Q+FD+ AG L +++ +AA R+++ V+ KYPN
Sbjct: 181 LEHLSDSIATYVCYQIEHGAQVVQLFDSWAGQLSPVDYDLFAAPYQKRVVNKVKAKYPNT 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I + G+ +++ + T + I LDW+V ++ L VQGN+DP L +
Sbjct: 241 PLILYISGSAGLVERMSK-TGVDIISLDWTVDMAEGCARLPAHLGVQGNVDPGILFGSPE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + ++ + NLGHGI P N +T
Sbjct: 300 AIKSRIVDVVKKAKGRSHVLNLGHGILPGTPEDNARIFFET 340
>gi|312112120|ref|YP_003990436.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y4.1MC1]
gi|311217221|gb|ADP75825.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y4.1MC1]
Length = 345
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 187/347 (53%), Gaps = 9/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MSKWMNDTFLRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +YN DAAIL+ DI+ A+G +V GP + +PI + I
Sbjct: 60 RLPVEQYNVDAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVERLGEIHPE-E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 119 DVPYVLETIKLLTTE-QLNVPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D++ Y+ AQI AG D IQIFD+ G + ++ + ++ RI +A+R +
Sbjct: 178 ALMDKLADMTIRYVKAQIRAGADAIQIFDSWVGAVSVDDYRTFIKPTMARIFAALREE-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++ K + L + IGLDW + L A E +QGNLDP L+
Sbjct: 236 NVPLIMFGVGASHLAKEWNDLP-LDVIGLDWRLSLREARESGITKALQGNLDPAVLLAPW 294
Query: 299 QVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ V ILD + ++FNLGHGI P++ P+ + L +
Sbjct: 295 EVIEKRVKQILDEGMERPGYVFNLGHGIFPEIRPETLKRLTAFIHEY 341
>gi|259486354|tpe|CBF84124.1| TPA: uroporphyrinogen decarboxylase (AFU_orthologue; AFUA_1G05060)
[Aspergillus nidulans FGSC A4]
Length = 363
Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats.
Identities = 115/353 (32%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G+ ++ PPIW+MRQAGRYLPEY + + ++F + C PE +T+QP+
Sbjct: 8 KNDLLLRAAWGDKVHRPPIWVMRQAGRYLPEYHEAK-GNRDFFECCRDPEIASTITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + ++
Sbjct: 67 DRYEGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLRSPTDGQYEKVMARDVDVK 126
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q + + Y+ +
Sbjct: 127 AELDYVYKAITLTRTKLNGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPKES 186
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + R+
Sbjct: 187 QALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFQDFSLPYLRHISANLPRRL 246
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A ++ +QGN DP
Sbjct: 247 KEMGLEPVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAFKIANGRVTIQGNADP 305
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + V ++ G +I NLGHG+TP V+P ++ + +
Sbjct: 306 GVLYGGREAIKQAVETMVAGFKKGKQGWIANLGHGVTPFVNPDDLKFYFEEIH 358
>gi|225849334|ref|YP_002729498.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643957|gb|ACN99007.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 349
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 183/349 (52%), Gaps = 10/349 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + L+ + I PIWLMRQAGRY+ EYR++R+K +F + + VE +L
Sbjct: 1 MNLKNDLFLKACKNQKIERTPIWLMRQAGRYMKEYRELREKAGSFKNFYKNVDLAVEASL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL-LNPNIDLFLN 118
P + + DA I+FSDIL +++G F E EGP +PI + E L P
Sbjct: 61 LPKKILDVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKSVEDVENLKP---FNTE 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + I + + L + +IGF GAP+T+A+YMI G +D + + F Y N + F
Sbjct: 118 DVHYVGEIIKGVNQTLNRELPVIGFAGAPFTLAAYMIEGRGSRDFKKAKKFMYDNPQEFK 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++DV +YL QI +G D +QIFD+ AG L +++ +A + +II +++ Y
Sbjct: 178 KLLDIIADVIIDYLNFQIKSGADAVQIFDSWAGHLSPKDYKEFALPPIKKIIKNLKKDYQ 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
I F+KG ++ ++ + ++ +DW V + ++ VQGNLDP L
Sbjct: 238 --PVIHFSKGVAGVI-DFIGESGADVYSVDWMVDIKDVKNKIYPNAAVQGNLDPTILYAE 294
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL+ G IFNLGHG+ P +D + V LV TV+
Sbjct: 295 KNAIKKEAEYILESWGKDSGHIFNLGHGLNPDMDVEKVKYLVDTVKELS 343
>gi|291483487|dbj|BAI84562.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. natto
BEST195]
Length = 353
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 185/350 (52%), Gaps = 11/350 (3%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + ID
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y A
Sbjct: 120 -QDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S + ++
Sbjct: 178 WNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE 237
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ ++ L + +GLDW + + A VQGNLDP L+
Sbjct: 238 --NVPLIMFGVGASHLADDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLA 294
Query: 297 GNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 295 PWEVIEKKTKEILDQGMKSDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 344
>gi|326476105|gb|EGE00115.1| uroporphyrinogen decarboxylase [Trichophyton tonsurans CBS 112818]
Length = 364
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 120/354 (33%), Positives = 185/354 (52%), Gaps = 18/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGQTVERPPIWIMRQAGRYLPEYHEAK-GNRDFFECCRSPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL----LNPNIDLF 116
RY+ DAAI+FSDILVI A+G V ++ +GP P+ T E LN +D+
Sbjct: 68 ERYSGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRAVDVT 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 128 -KELDYVYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S+V E+L Q+ AG ++Q+FD+ AG L F +++ + + + + ++
Sbjct: 187 SKKLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFADFSLPYLRYVSANLPKR 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + N +GLDW + A + +QGN D
Sbjct: 247 LQEMGLEAVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDPAKARAVANGRVVLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 306 PGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 359
>gi|239826184|ref|YP_002948808.1| uroporphyrinogen decarboxylase [Geobacillus sp. WCH70]
gi|259645150|sp|C5D6M5|DCUP_GEOSW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239806477|gb|ACS23542.1| uroporphyrinogen decarboxylase [Geobacillus sp. WCH70]
Length = 345
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 187/347 (53%), Gaps = 9/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ + L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MSKQKNDTFLRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y+ DAAIL+ DI+ A+G +V GP + +PI + I
Sbjct: 60 RLPVEQYHVDAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVEKLGEIHPE-E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 119 DVPYVLETIKLLTTE-QLNVPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D++ Y+ AQI AG IQIFD+ G + ++ + ++ RI +A+R +
Sbjct: 178 ALMDKLADMTIRYVKAQIRAGASAIQIFDSWVGAVNVDDYRTFIKPTMARIFAALREE-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++ K + L + IGLDW + + A E +QGNLDP L+
Sbjct: 236 NVPLIMFGVGASHLAKEWNDLP-LDVIGLDWRLSIREARERGITKALQGNLDPAVLLAPW 294
Query: 299 QVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ V ILD + +IFNLGHGI P++ P+ + L +
Sbjct: 295 EVIEKRVKQILDEGMEQPGYIFNLGHGIFPEIQPETLKRLTAFIHDY 341
>gi|290766188|gb|ADD60150.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 342
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 103/343 (30%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + P+W+MRQAGR++ EYR + KK+ F + E + E++LQP
Sbjct: 1 KDPLLLRAARGEAVERIPVWMMRQAGRHMQEYRDLIKKYPTFRERSEIHEVSTEISLQPY 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RRY D ILFSDIL +G + + E GP++ P+ T E ID +
Sbjct: 61 RRYGTDGVILFSDILTPLPGMGVDFKIEEKTGPKLVPMRTWESVNAMHTIDSE-KACPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ L+K++ ++ T++GF G P+T+A+YM+ GG +++ + + + + +L
Sbjct: 120 GQTLRDLKKEVGSNATVLGFVGCPYTLATYMVEGGSSREYLEIKKMMFTEPELLHAMLAK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++D +Y I QI +G VIQ+FD+ AG L +++ +AA ++I ++ +P I
Sbjct: 180 IADSIGDYGIYQIESGAQVIQVFDSWAGHLSPKDYDIFAAPYQKKVIQKIKSSHPEVPII 239
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+ +G +L+ + + ++ I LDW+V + A + + +QGNLDP L N+V+
Sbjct: 240 IYINKSGALLERMSQ-SGADIISLDWTVMIEEARKRIGNDIGIQGNLDPAALFAPNEVIK 298
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G + NLGHGI + + TV++ +
Sbjct: 299 ERTEEILRACGGRNHVMNLGHGIEATTSEEKAEFFINTVKNFR 341
>gi|116878447|ref|YP_356198.3| uroporphyrinogen decarboxylase [Pelobacter carbinolicus DSM 2380]
gi|123743071|sp|Q3A6H9|DCUP_PELCD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114843083|gb|ABA88028.4| uroporphyrinogen decarboxylase [Pelobacter carbinolicus DSM 2380]
Length = 343
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 125/344 (36%), Positives = 183/344 (53%), Gaps = 8/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + G + P+WLMRQAGRYLP+YR+IR++ K FL++C TPE E+TL
Sbjct: 1 MMPEDYDFINACYGRPVTRTPVWLMRQAGRYLPQYRKIRERVK-FLELCKTPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+ DAAILFSDIL+ +A+G+N+ + P ++P + + +
Sbjct: 60 QPVDALGVDAAILFSDILIPIEAMGQNLFYRPA--PVLEPPVRTAADVEALRVLQPEQDV 117
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +LR++L + LIGF GAP+T+A YM+ G + + YQ + L
Sbjct: 118 PFVLETIRLLRRELDGRVPLIGFGGAPFTLACYMVEGAGSRHFLALKRLMYQAPETYARL 177
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D ++D S YL AQ AG +Q+FD+ G L +++ Y R++SA+
Sbjct: 178 MDKITDTSIVYLRAQAEAGAQALQVFDSWGGILSPADYQRYVLPYSRRLLSALGDF--GI 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQ 299
I F KGAG ML + + +GLDW L+ A ++ G VQGNLDP L+
Sbjct: 236 PLIHFVKGAGAML-DLVAMAGGQVVGLDWCTSLNRARDILGNGMAVQGNLDPSVLLGAQD 294
Query: 300 VMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ V ILD G IFNLGHGI P+V P+N LV V
Sbjct: 295 IIEREVRRILDENAGRPGHIFNLGHGILPEVPPENAAFLVDCVH 338
>gi|321314735|ref|YP_004207022.1| uroporphyrinogen decarboxylase [Bacillus subtilis BSn5]
gi|320021009|gb|ADV95995.1| uroporphyrinogen decarboxylase [Bacillus subtilis BSn5]
Length = 353
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 184/350 (52%), Gaps = 11/350 (3%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R + L+ +G + P+W MRQAGR PEYR++++K+ F D+ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-DITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + ID
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLSDIEKLGQIDPE 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y A
Sbjct: 120 -QDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S + +
Sbjct: 178 WNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAEE 237
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ ++ L + +GLDW + + A VQGNLDP L+
Sbjct: 238 --NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLA 294
Query: 297 GNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 295 PWEVIEKKTKEILDQGMKSDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 344
>gi|296414999|ref|XP_002837181.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633038|emb|CAZ81372.1| unnamed protein product [Tuber melanosporum]
Length = 363
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 187/351 (53%), Gaps = 15/351 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
IL +G + PP+W+MRQAGRYLPEY Q++ ++F +C PE +TLQPI
Sbjct: 9 SNDLILRAARGEPVERPPMWVMRQAGRYLPEYNQVKGG-RDFFSVCRDPELASTITLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY-LLNPNIDLFLNY 119
RY DAAI+FSDILVI A+G V +E +GP +P+ E L P +D+
Sbjct: 68 LRYANLIDAAIIFSDILVIPQAMGMTVEMLEAKGPHFPNPLRKPEDLSQLKPEVDVRAE- 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +I + R+KL + LIGF GAPWT+ SYM+ GG K + + +++ A +
Sbjct: 127 LAYVFDAIRLTRRKLAGRVPLIGFVGAPWTLMSYMVEGGGSKTFMFVKTWIFKHPSATHS 186
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV ++L Q+ AG ++Q+FD+ AG L H+F ++ + +I V +
Sbjct: 187 LLARITDVCVDFLAYQVLAGAQMLQVFDSWAGELSPHDFRTFSLPYIRQISVRVPARVRE 246
Query: 238 ---PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMR 293
FAKGA Y L + +GLDW+ A+ + +QGN+DP
Sbjct: 247 LGGEPVPMTIFAKGAWYALDELCE-SGYQVVGLDWTHDPESAVAIANGRVTLQGNMDPNV 305
Query: 294 LVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + V I G G +I NLGHGITP VDP+++ + R
Sbjct: 306 LYGGREAITRTVERIAKGFGGGRRGWIVNLGHGITPLVDPEDLRWFFEETR 356
>gi|295401104|ref|ZP_06811078.1| uroporphyrinogen decarboxylase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976897|gb|EFG52501.1| uroporphyrinogen decarboxylase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 345
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 9/347 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M++ L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MSKWMNDTFLRACRGEKTDYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +YN DAAIL+ DI+ A+G +V GP + +PI + I
Sbjct: 60 RLPVEQYNVDAAILYKDIMSPLPAIGVDVEIKAGVGPVIANPIRSLADVERLGEIHPE-E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 119 DVPYVLETIKLLTTE-QLNVPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+D++ Y+ AQI AG D IQIFD+ G + ++ + ++ RI +A+R +
Sbjct: 178 ALMDKLADMTIRYVKAQIRAGADAIQIFDSWVGAVSVDDYRTFIKPTMARIFAALREE-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F GA ++ K + L + IGLDW + L A + +QGNLDP L+
Sbjct: 236 NVPLIMFGVGASHLAKEWNDLP-LDVIGLDWRLSLREARQSGITKALQGNLDPAVLLAPW 294
Query: 299 QVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ V ILD + ++FNLGHGI P++ P+ + L +
Sbjct: 295 EVIEKRVKQILDEGMERPGYVFNLGHGIFPEIRPETLKRLTAFIHEY 341
>gi|87124030|ref|ZP_01079880.1| Uroporphyrinogen decarboxylase HemE [Synechococcus sp. RS9917]
gi|86168599|gb|EAQ69856.1| Uroporphyrinogen decarboxylase HemE [Synechococcus sp. RS9917]
Length = 352
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 104/345 (30%), Positives = 186/345 (53%), Gaps = 4/345 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G V+ PP+W+MRQAGRY+ YR +R ++ +F + P+ + E+++
Sbjct: 1 MSDVLPLLLRAARGEVVERPPVWMMRQAGRYMKIYRDLRDRYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G + +E++GP+++ PI T E ++
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQINAPIRTIEQVKALQPLEPA-ES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + + LR+ + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LPFVGEVLGRLRQSVGNQATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFRKPELLHQ 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD ++ A YL QI AG V+Q+FD+ AG L +++ +AA +++ V++ +P+
Sbjct: 180 LLDHFAESIATYLCYQIDAGAQVVQMFDSWAGQLSPTDYDTFAAPYQKKVVDRVKQTHPD 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
FI + G+ +++ R T + + LDW+V ++ L + VQGN+DP L
Sbjct: 240 TPFILYISGSAGVIERMGR-TGVDIVSLDWTVDMADGCARLPEHLGVQGNVDPGLLFGTP 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + D ++ + I NLGHGI P +N + +S
Sbjct: 299 EAIRDRIDDCVRKAHGRRHILNLGHGILPGTPEENGAAFFEAGKS 343
>gi|255322123|ref|ZP_05363270.1| uroporphyrinogen decarboxylase [Campylobacter showae RM3277]
gi|255300821|gb|EET80091.1| uroporphyrinogen decarboxylase [Campylobacter showae RM3277]
Length = 340
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 118/340 (34%), Positives = 184/340 (54%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R +FL +C + E+T+QP+
Sbjct: 3 FIDACLKKPTPYTPVWMMRQAGRYLPEYMRVRAAAGDFLSLCKDYKKASEVTIQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G +++FV+ EGP DPI T++ ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGMDLKFVQGEGPVFSDPIKTKDDLD-RLDVQKSIKNLDYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I + R+ L LIGFCGAPWT+A+YMI GG K + ++ Y N + +L ++
Sbjct: 122 IKLTRENLVQDKALIGFCGAPWTIATYMIEGGGTKTYAVSKKLLYSNPEFMHQILAKVTA 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y+ QI AGV+ +QIFD+ A L + + + + + I+ A++ ++P I F
Sbjct: 182 ALIGYMKEQIKAGVNAVQIFDSWAAALEDEAYFEFGWKYIMDIVDALKAEFPQIPVIVFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + G+DWS P+ A E L + +QGN++P RL + + GV
Sbjct: 242 KGISGYLDKIS--GNFEVFGVDWSTPIELAKEKLSPKYVLQGNMEPTRLY-SKEAIDAGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL + + P IFNLGHGI P V +N +K V+ +
Sbjct: 299 ERILQTMKNAPHIFNLGHGILPDVPVENAKYFIKRVQEKS 338
>gi|281202531|gb|EFA76733.1| uroporphyrinogen decarboxylase [Polysphondylium pallidum PN500]
Length = 368
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 184/346 (53%), Gaps = 7/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL V +G + P+W+MRQAGRYLPE++++R +F +C PE ++TLQPI
Sbjct: 10 KNDLILRVCRGEKVERTPVWIMRQAGRYLPEFKEVRADV-DFFTVCRNPELACKVTLQPI 68
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
R+ DAAI+FSDILVI A+G V+ + +GP DP+ L
Sbjct: 69 DRFPGLDAAIIFSDILVIPQAMGLEVQMIPGKGPHFPDPVREPSEMSRVKYPVDIKKELQ 128
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD--HGQNRVFAYQNSRAFNW 179
+F +I++ R++L + LIGF GAPWT+ SY I GG I +++ Y+ +
Sbjct: 129 YVFDAITLTRQRLEGRVPLIGFSGAPWTLLSYCIEGGGISGSGMNHAKLWLYKYKEESHR 188
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L L+D YLI Q+ AG ++Q+FD+ +G L F+ Y + I V+ +P
Sbjct: 189 FLKMLTDTVVGYLIGQVDAGAQLLQVFDSWSGDLSPDLFDEYCLPYLVDIAKRVKEVHPT 248
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVG 297
I FAKG+ + L +L+ + +G+DW++ A E +QGN+DP + G
Sbjct: 249 IPMICFAKGSNFGLTKLAQLSQYDVLGIDWTIEPKVAREFVAGTNKVLQGNMDPAVMFAG 308
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+V+ V +++ G+ +I NLGHG+ P + + + + +V +
Sbjct: 309 QEVIDREVERMINSFGTQRYIANLGHGMQPSMTIDSAANFISSVHN 354
>gi|84622798|ref|YP_450170.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|123522834|sp|Q2P6D1|DCUP_XANOM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84366738|dbj|BAE67896.1| Uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 354
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 120/349 (34%), Positives = 186/349 (53%), Gaps = 12/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGVYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD G +FNLGHG++P ++P++V LV+ V+
Sbjct: 301 AIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|255639814|gb|ACU20200.1| unknown [Glycine max]
Length = 387
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 108/341 (31%), Positives = 177/341 (51%), Gaps = 4/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQP
Sbjct: 46 EPLLLNAVRGIDVERPPVWLMRQAGRYMKSYQTICEKYPSFRERSENVDLVVEISLQPWH 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL + V+ +GP DPI T + + +
Sbjct: 106 VFKPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPIHTAAQVDQVREF-IPEESVPYV 164
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+ S+ + LL
Sbjct: 165 GEALTILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKNFSKIKRLAFSESKILHSLLQK 224
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ A Y+ Q G +QIFD+ A L +FE ++ + +II V++ +PN I
Sbjct: 225 FTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIIDTVKKSHPNLPLI 284
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ LT + + LDW+V ++ L VQGN+DP L + +
Sbjct: 285 LYASGSGGLLERLA-LTGVDVVSLDWTVDMADGRRRLGPNIAVQGNVDPGVLFGSKEFIT 343
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D +N + G G I NLGHGI +NV + +S
Sbjct: 344 DRINDTVRKAGRGKHILNLGHGIKVGTPEENVAHFFEVAKS 384
>gi|226311401|ref|YP_002771295.1| uroporphyrinogen decarboxylase [Brevibacillus brevis NBRC 100599]
gi|226094349|dbj|BAH42791.1| uroporphyrinogen decarboxylase [Brevibacillus brevis NBRC 100599]
Length = 345
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 122/349 (34%), Positives = 184/349 (52%), Gaps = 11/349 (3%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + L+ +G P+W MRQAGRY PEYR IR K +F +M Y PE E+
Sbjct: 1 MTAKTFNDTFLKACRGEATEHVPVWYMRQAGRYQPEYRAIRAK-HSFFEMNYIPEVCAEV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
T P+ + DAAILF+DI+ +G +V GP + +PI + + +D
Sbjct: 60 TRLPVEQLGVDAAILFADIMTPLKPIGVDVNIESGIGPVIANPIESLKDVERLLELDPE- 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
++ I +SI ILR++L + LIGF GAP+T+ASY+I GG K + + + F Y A+
Sbjct: 119 THVPYILESIKILRQQL--SVPLIGFAGAPFTLASYLIEGGPSKHYHKTKAFMYTEPVAW 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ L D++ YL AQI AG +Q+FD+ G L + ++ Y + RI +A++
Sbjct: 177 QALMEKLGDMTITYLKAQIKAGAQAVQVFDSWVGALNDEDYREYITPVMTRIFNALKDT- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
I F GAG++L ++ RL + +GLDW ++ A E+ +QGNLDP L+
Sbjct: 236 -GVPTIYFGIGAGHLLMDWNRLP-VDVVGLDWRTSITTAREMGVTKTLQGNLDPTLLLAP 293
Query: 298 NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + ILD FIFNLGHG+ P + + L K + K
Sbjct: 294 WEKLEAKAKEILDEGTKQPGFIFNLGHGVFPDAKVETLQQLTKFIHRYK 342
>gi|58039500|ref|YP_191464.1| uroporphyrinogen decarboxylase [Gluconobacter oxydans 621H]
gi|81672676|sp|Q5FS38|DCUP_GLUOX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58001914|gb|AAW60808.1| Uroporphyrinogen decarboxylase [Gluconobacter oxydans 621H]
Length = 353
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 130/346 (37%), Positives = 198/346 (57%), Gaps = 6/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L L+G + PPP+WLMRQAGRYLPE+R +R + +FL C TP+ ELT+Q
Sbjct: 9 SPSSKPLLRALRGEAVWPPPVWLMRQAGRYLPEFRAMRDRA-DFLTRCMTPDMATELTIQ 67
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
PIRRY D AILFSDIL++ A+G+++ F++ GP + I + E L + + +
Sbjct: 68 PIRRYGMDGAILFSDILILPWAMGQSLEFIDGRGPVLGAIRS-EADLARLDPKRVQDAVA 126
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+ +++S L K+LP+ TL+GF G+P+TV+ YM+ GG +D + R N F+ L+
Sbjct: 127 PVRETLSRLTKELPDVTTLLGFAGSPFTVSCYMVEGGGSRDFAETRRMMQTNPALFDRLI 186
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+ +AE L QI AG + + +FD+ AG L F Y +I+ +R ++P
Sbjct: 187 DTLTSSTAEMLCGQIEAGAEAVMLFDSWAGILPPSAFRRYVIEPTRQIVEYIRARHPKTP 246
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF----ALELQKEGPVQGNLDPMRLVVG 297
I F + G M++ Y + T N + LD + E++ +QGN+DPM L G
Sbjct: 247 IIGFPRLGGIMVREYAQKTGVNTLALDTVADPAQISELVSEVRPGLTLQGNMDPMILFSG 306
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ MI AI D + P +FNLGHG+ P+NV LV+ VR+
Sbjct: 307 GETMIREAQAIRDAMRGKPHVFNLGHGVMQHTPPENVAALVEAVRA 352
>gi|268678958|ref|YP_003303389.1| uroporphyrinogen decarboxylase [Sulfurospirillum deleyianum DSM
6946]
gi|268616989|gb|ACZ11354.1| uroporphyrinogen decarboxylase [Sulfurospirillum deleyianum DSM
6946]
Length = 340
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 117/337 (34%), Positives = 186/337 (55%), Gaps = 4/337 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++R + +FL +C P+ E+TLQP+
Sbjct: 3 FVDACLGKKTPYTPVWMMRQAGRYLPEYMEVRAQAGDFLSLCKDPQKACEVTLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G ++F++ EGP + L ++ +N L ++++I
Sbjct: 63 VDAAILFSDILVVPLEMGMELQFLKGEGPVFSHPIKNQADLDALDVQKAINGLEYVYETI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++R KL LIGFCGAPWT+A+YMI G K + + Y N + LL +++V
Sbjct: 123 RLIRGKLAADKALIGFCGAPWTLATYMIEGQGTKTYALVKKLIYTNPSFMHALLSKVTEV 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y+ QI +G DV+ IFD+ A L E + ++ + I + ++ KYP+ I F K
Sbjct: 183 LKGYMERQIQSGADVVMIFDSWAAALEESAYFEFSWAYMKEISAYLKGKYPHVPVILFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS P+ A E L + +QGN++P RL + + G++
Sbjct: 243 GISGYLDKI--DGEFDVFGVDWSTPMELAKEKLGHKYVLQGNMEPTRLY-SKEAIDAGIS 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I+ V+ + +FNLGHGI P + +N ++ V+S
Sbjct: 300 HIVSVMKNERHVFNLGHGILPDIPVENAKYFIQQVQS 336
>gi|94266922|ref|ZP_01290576.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
gi|93452398|gb|EAT03015.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
Length = 345
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 128/343 (37%), Positives = 193/343 (56%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W+MRQAGRYLPEY +R+++ FL+MC TPE E+TLQP+
Sbjct: 2 NTTFLQACRGEPTDYTPVWMMRQAGRYLPEYHTVRRRY-TFLEMCRTPEAAAEVTLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNYLL 121
DAAILFSDILV+ +A+G + F+E +GP +P+ + L+ P+ + L Y
Sbjct: 61 LIGVDAAILFSDILVLPEAMGAPLDFLEGKGPVFGEPVRDEAAVDRLIVPDPEEKLGY-- 118
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +LR++L N + LIGF GAP+TVA+Y+I GG K+ + Y + LL
Sbjct: 119 -VMAAIRLLRQELVNKVPLIGFAGAPFTVATYLIEGGSSKNFFLTKKMMYTAPELYGRLL 177
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D +++ + YL AQ AG +QIFD+ AG L +F +A RII+A+R
Sbjct: 178 DKITEGTIAYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYAKRIIAALREAGVEVP 237
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I FA +L + ++ +GLDW + L A + + +QGNLDP L++
Sbjct: 238 LIYFANNGATLLPQ-CKDCGADVLGLDWRINLDDAARLVGPDISLQGNLDPCALLLPAAK 296
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
M + V IL+ + IFNLGHGI P++ P+ +V+TV
Sbjct: 297 MEERVARILEQGKAARSHIFNLGHGILPEIPPEQAKMMVETVH 339
>gi|94264026|ref|ZP_01287826.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
gi|93455537|gb|EAT05724.1| Uroporphyrinogen decarboxylase HemE [delta proteobacterium MLMS-1]
Length = 398
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 128/345 (37%), Positives = 193/345 (55%), Gaps = 10/345 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
L+ +G + P+W+MRQAGRYLPEY +R+++ FL+MC TPE E+TLQP
Sbjct: 53 TMNTTFLQACRGEPTDYTPVWMMRQAGRYLPEYHTVRRRY-TFLEMCRTPEAAAEVTLQP 111
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLNY 119
+ DAAILFSDILV+ +A+G + F+E +GP +P+ + L+ P+ + L Y
Sbjct: 112 VDLIGVDAAILFSDILVLPEAMGAPLDFLEGKGPVFGEPVRDEAAVDRLIVPDPEEKLGY 171
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ +I +LR++L N + LIGF GAP+TVA+Y+I GG K+ + Y +
Sbjct: 172 ---VMAAIRLLRQELVNKVPLIGFAGAPFTVATYLIEGGSSKNFFLTKKMMYTAPELYAR 228
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD +++ + YL AQ AG +QIFD+ AG L +F +A RII+A+R
Sbjct: 229 LLDKITEGTIAYLKAQAAAGAQALQIFDSWAGVLAPRDFAEFALPYAKRIITALREAGVE 288
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I FA +L + ++ +GLDW + L A + + +QGNLDP L++
Sbjct: 289 VPLIYFANNGATLLPQ-CKDCGADVLGLDWRINLDDAARLVGPDISLQGNLDPCALLLPA 347
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
M + V IL+ + IFNLGHGI P++ P+ +V+TV
Sbjct: 348 AKMEERVARILEQGKAARSHIFNLGHGILPEIPPEQAKMMVETVH 392
>gi|260222502|emb|CBA32129.1| Uroporphyrinogen decarboxylase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 367
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 178/363 (49%), Gaps = 25/363 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ P+WLMRQAGRYLPEY R K +F+ + EY E+TLQP+
Sbjct: 3 NPTFLQACMRQATAHTPLWLMRQAGRYLPEYVATRAKAGSFMGLATNTEYATEVTLQPLE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL + DA+G + F + EGPR PI T+ D + L +
Sbjct: 63 RYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFASPIKTEADVAKLEVPD--MAKLQYV 120
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F ++S +RK L + LIGF G+PWT+A YM+ G D+ + Y +
Sbjct: 121 FDAVSSIRKALTVDGKGRVPLIGFSGSPWTLACYMVEGKGSDDYRLVKTMMYSRPDLMHR 180
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L +D A YL AQI AG + +FD+ G L + F+ ++ R++ ++R +
Sbjct: 181 MLAINADSVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQEFSLAYTARVLKQLKRFGTD 240
Query: 240 ---AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLD 290
I F KG G L++ + L D +GLDW+V L+ A L +QGN+D
Sbjct: 241 GKVVPRIVFTKGGGLWLQDMQAL-DCEVLGLDWTVNLAKARALVGGIENGPGKALQGNID 299
Query: 291 PMRLVVGNQVMIDGVNAILDVLGS-------GP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + V +LD G GP IFNLGHGI+ P +V LV V
Sbjct: 300 PNVLFAPPAAIETEVAKVLDSFGKPFQGSGTGPTHIFNLGHGISQYTPPDHVAALVAAVH 359
Query: 343 SEK 345
S
Sbjct: 360 SHS 362
>gi|149182662|ref|ZP_01861130.1| uroporphyrinogen decarboxylase [Bacillus sp. SG-1]
gi|148849631|gb|EDL63813.1| uroporphyrinogen decarboxylase [Bacillus sp. SG-1]
Length = 347
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 183/347 (52%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L+ +G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MKKMNDTFLKAARGEKTDYTPVWYMRQAGRSQPEYRELKEKY-SLFEITHQPEICAYVTR 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ +Y+ DAAIL+ DI+ ++G +V GP + +PI + ID +
Sbjct: 60 LPVEQYDVDAAILYKDIMSPLPSIGVDVDIKPGIGPVIDNPIRSVADVEKLGEIDPE-SD 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ I +I +L K+ + LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 119 VPYILDTIKLLTKE-QLSVPLIGFAGAPFTMASYMIEGGPSKNYNKTKAFMYAEPKAWFT 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+D++ Y AQI AG QIFD+ G L ++ + ++ +I S ++++ N
Sbjct: 178 LMDKLADMTITYGRAQIKAGASAFQIFDSWVGALNVQDYRTFIKPTMEKIFSELKKE--N 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ + L + +GLDW +P+ AL V GNLDP L+
Sbjct: 236 VPLIMFGVGASHLSMEWHDLP-IDVVGLDWRLPVQEALSNGITKTVMGNLDPAILLAPWD 294
Query: 300 VMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + AILD + IFNLGHG+ P V P+ + L V
Sbjct: 295 VIEEKAKAILDQGIANPGHIFNLGHGVFPSVKPETLKRLTAFVHEYS 341
>gi|33240529|ref|NP_875471.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|45476863|sp|Q7VBL3|DCUP_PROMA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33238057|gb|AAQ00124.1| Uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 351
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 102/342 (29%), Positives = 183/342 (53%), Gaps = 4/342 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G +N PP+W+MRQAGRY+ YR++R +F + P+ + E+++
Sbjct: 1 MTDSLPLLLRAARGESVNRPPVWMMRQAGRYMKVYRELRDNHPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
QP R + D ILFSDIL +G + VE++GP ++ PI T E ++ ++
Sbjct: 61 QPFREFKPDGVILFSDILTPLPGMGIDFDIVESKGPLINDPIRTLEQVKTLRPLEPQVS- 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 120 LPFVGEVLGRLRESVKNEAAVLGFVGAPWTLAAYVVEGKSSKNYSVIKAMAFQQPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ ++ A YL QI +G V+Q+FD+ AG L +++NYAA +++ V++ +P+
Sbjct: 180 LLNHFAESIANYLKYQIESGAQVVQMFDSWAGQLSPIDYDNYAAPYQKKVVDLVKQSHPD 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I + G+ +++ + T + + LDW+V ++ L +QGN+DP L
Sbjct: 240 TPMILYISGSAGVIERMAK-TGVDIVSLDWTVDMAEGCARLPNNIGIQGNVDPGILFGTP 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+++ + + + I NLGHGI P +N +T
Sbjct: 299 KMIQERIIDTVKKAKGRKHILNLGHGILPGTPEENAKVFFET 340
>gi|289724661|gb|ADD18305.1| uroporphyrinogen decarboxylase [Glossina morsitans morsitans]
Length = 350
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 10/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ +G + P+W+MRQAGRYLPE+R+IRK++ +F +C TP E+T+QP+
Sbjct: 5 KNDNLLKAARGEPVERVPVWVMRQAGRYLPEFREIRKQY-DFFTVCRTPSIACEVTMQPL 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V + GP +P+ T + ++ +
Sbjct: 64 RRFDLDASIIFSDILVIPQALGLTVEMRPDVGPVFPEPLQTPADLK-RLAPEGAVDRVAY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I+++R L + LIGF GAPWT+ YMI GG K + + + LL
Sbjct: 123 VGEAITMMRHVLDGKVPLIGFTGAPWTLMGYMIEGGGSKTMSKTKSWLLCYPEDSEELLT 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----Y 237
L+ V +YL Q+ AG ++QIF++ A L + +F + + I + R+
Sbjct: 183 MLTSVIIDYLEMQVKAGAQMLQIFESSAEHLTKSDFLKWCLPYLKDIHDQLTRRLKEQSL 242
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
P FAKGA + L L + I LDW+V A E + +QGNLDP +
Sbjct: 243 PLVPMTLFAKGAAHSLTEQSTL-GYDVISLDWTVDPEKAREQVGPNITLQGNLDPQDMYK 301
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V ++ G +I NLGHGITPQ ++ + V
Sbjct: 302 TPEEIRVLVTDMVRKFGKIRYIANLGHGITPQTPIVSMETFIDAVH 347
>gi|261188374|ref|XP_002620602.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis SLH14081]
gi|239593202|gb|EEQ75783.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis SLH14081]
gi|239609344|gb|EEQ86331.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis ER-3]
gi|327354445|gb|EGE83302.1| uroporphyrinogen decarboxylase [Ajellomyces dermatitidis ATCC
18188]
Length = 365
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 120/353 (33%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G I PPIW+MRQAGRYLPEY Q++ K +F + C +PE LTLQPI
Sbjct: 10 QNDLLLRAARGEKIERPPIWIMRQAGRYLPEYHQVKAK-NDFFECCRSPEIASTLTLQPI 68
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY+ DAAI+FSDILVI A+G V ++ +GP +P+ + + +D ++
Sbjct: 69 ERYSGLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPEPLKSPDDPQYRQVLDKKVDVA 128
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 129 KELDYVYKAITLTRHKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPEAT 188
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL ++++ EYL Q+ AG ++Q+FD+ AG L F ++ + I + + ++
Sbjct: 189 KALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPSSFAEFSLPYLRYISANLPKRL 248
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L + N +GLDW + A+++ + +QGN DP
Sbjct: 249 AGMGQEVVPMTVFAKGAWYALDALCD-SGYNVVGLDWLHDPAEAMKIARGRVTLQGNADP 307
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ +I NLGHGITP VDP+++ + +
Sbjct: 308 GCLYGTRESITAIVENMVQGFWGEKRGWIANLGHGITPLVDPEDLKFYFREIH 360
>gi|308812943|ref|XP_003083778.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116055660|emb|CAL57745.1| putative uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 390
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 98/337 (29%), Positives = 168/337 (49%), Gaps = 2/337 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ ++ +G + P W+MRQAGRY+ EYR + K +F + T + VE+T+QP
Sbjct: 49 SQDALMVRAARGEKVERAPAWMMRQAGRYMKEYRDLAAKHPSFRERSETTDLIVEITMQP 108
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
R + D ILFSDIL A G + + +GP ++ T E L ++ L+ +
Sbjct: 109 FRAFKPDGVILFSDILTPFPAFGIDFEIDDYKGPMLEKTITTE-EDLKMLREVDLSKVEF 167
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ILR+++ + ++GF GAPWT+ +Y++ G + + + LL
Sbjct: 168 VADALKILRQEVGDEAAVLGFVGAPWTLCTYIVEGKSTSTYKTIKSMCFTAPDVLRTLLS 227
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D A Y+ QI AG VIQIFD+ G L H +E ++ + R+++ V++ +P
Sbjct: 228 HVADALAVYIGFQIDAGAQVIQIFDSWGGQLPPHMWEEWSKPYIERVVNKVKQTHPGVPI 287
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ L + IGLDW++ + + VQGN+DP+ L G+ +
Sbjct: 288 TLYANGSGGLLERMATLP-VDTIGLDWTIDMEDGRRRVGDKAVQGNVDPVVLFAGDDAIE 346
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
V + G + NLGHG+ + V
Sbjct: 347 KAVRDVCRKAGPTGHVLNLGHGVLVGTPEEAVKHFFD 383
>gi|116075430|ref|ZP_01472690.1| uroporphyrinogen decarboxylase [Synechococcus sp. RS9916]
gi|116067627|gb|EAU73381.1| uroporphyrinogen decarboxylase [Synechococcus sp. RS9916]
Length = 352
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 101/346 (29%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + ++ L P
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMAQVDALRPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPDILH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +++ T + + LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVIERMA-TTGVDIVSLDWTVDMAEALARLPEHIGVQGNVDPGLLFGS 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 298 PEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|218247770|ref|YP_002373141.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8801]
gi|218168248|gb|ACK66985.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8801]
Length = 354
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 108/347 (31%), Positives = 184/347 (53%), Gaps = 8/347 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + +L +G +++ PP+W+MRQAGRY+ YR +R K+ +F D + +E+
Sbjct: 1 MTQGNNTPYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSENADLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
+LQP + + D I+FSDIL +G + E++GP +D PI TQE ++D
Sbjct: 61 SLQPWKAFRPDGVIMFSDILTPLPGIGISFEIPESKGPMIDSPIRTQEQVDNLHSLDPEA 120
Query: 118 NYLLPIFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ LP ++I LR ++ N T++GF G+PWT+A+Y I G KD+ + A+
Sbjct: 121 S--LPFIKTILKALRDEVKNEATVLGFVGSPWTLAAYAIEGKSSKDYANIKRMAFSEPAI 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L L+D A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+
Sbjct: 179 LHQFLSKLADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYKVFALPYQQQVVRQVKAT 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+P+ I + G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L
Sbjct: 239 HPDTPLILYISGSAGVLELMGQ-SGVDIVSVDWTVDMADARQRLGRNMMVQGNIDPGILF 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
QV+ D + + G G I NLGHG+ +NV +T +
Sbjct: 298 GSKQVIRDRILDTVQKAGKGGHILNLGHGVLVGTPEENVGYFFETAK 344
>gi|121702781|ref|XP_001269655.1| uroporphyrinogen decarboxylase [Aspergillus clavatus NRRL 1]
gi|119397798|gb|EAW08229.1| uroporphyrinogen decarboxylase [Aspergillus clavatus NRRL 1]
Length = 363
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 120/353 (33%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C TPE LTLQPI
Sbjct: 9 KNDLLLRAARGEQVPRPPIWVMRQAGRYLPEYHEAKAN-RDFFECCRTPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 128 EELDYVYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKMFVQSKTWIYKYPKES 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL ++++ EYL Q+ AG ++Q+FD+ AG + F+ +A + I + + +K
Sbjct: 188 QALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGEMSPATFKTFALPYLRYISANLPKKL 247
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A+ + +QGN DP
Sbjct: 248 DEMGLERVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAMNIANGRVTIQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + V ++ G +I NLGHGITP V P ++ + +
Sbjct: 307 GVLYGGRAAITEAVEIMVKGFRGGKQGWIANLGHGITPFVKPDDLKFFFEEIH 359
>gi|326481254|gb|EGE05264.1| uroporphyrinogen decarboxylase [Trichophyton equinum CBS 127.97]
Length = 364
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 120/354 (33%), Positives = 185/354 (52%), Gaps = 18/354 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGQTVERPPIWIMRQAGRYLPEYHEAK-GNRDFFECCRSPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL----LNPNIDLF 116
RY+ DAAI+FSDILVI A+G V ++ +GP P+ T E LN +D+
Sbjct: 68 ERYSGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRAVDVT 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 128 -KELDYVYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S+V E+L Q+ AG ++Q+FD+ AG L F +++ + + + + ++
Sbjct: 187 SKKLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRSFADFSMPYLRYVSANLPKR 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + N +GLDW + A + +QGN D
Sbjct: 247 LQEMGLEAVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDPAKARAVANGRVVLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 306 PGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 359
>gi|123965883|ref|YP_001010964.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9515]
gi|166234270|sp|A2BVP6|DCUP_PROM5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123200249|gb|ABM71857.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9515]
Length = 346
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 107/348 (30%), Positives = 183/348 (52%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + ++++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + + D ILFSDIL +G N +E++GP + +PI + +
Sbjct: 61 QPFKAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIENPIKNIHQIENLKEL-VPSES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LSFVGEVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ KYP
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEKYPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGN 298
I + G+ +L+ R T + I LDW+V + A + EG +QGN+DP L
Sbjct: 240 TPIILYISGSAGLLERMAR-TGVDIISLDWTVDIEEACKRIPEGIGIQGNVDPGLLFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + +I NLGHGI P +N + +K+
Sbjct: 299 ESIKERIDITFNKSKGRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|16078076|ref|NP_388893.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308850|ref|ZP_03590697.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313174|ref|ZP_03594979.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318097|ref|ZP_03599391.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322372|ref|ZP_03603666.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|416890|sp|P32395|DCUP_BACSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|143043|gb|AAA22517.1| uroporphyrinogen decarboxylase [Bacillus subtilis]
gi|2226230|emb|CAA74518.1| Uroporphyrinogen III decarboxylase [Bacillus subtilis subsp.
subtilis str. 168]
gi|2633348|emb|CAB12852.1| uroporphyrinogen III decarboxylase [Bacillus subtilis subsp.
subtilis str. 168]
Length = 353
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 118/350 (33%), Positives = 185/350 (52%), Gaps = 11/350 (3%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + ID
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y A
Sbjct: 120 -QDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S + ++
Sbjct: 178 WNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE 237
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ ++ L + +GLDW + + A VQGNLDP L+
Sbjct: 238 --NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLA 294
Query: 297 GNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 295 PWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 344
>gi|148239091|ref|YP_001224478.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7803]
gi|166234292|sp|A5GJR6|DCUP_SYNPW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|147847630|emb|CAK23181.1| Uroporphyrinogen decarboxylase [Synechococcus sp. WH 7803]
Length = 352
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 105/346 (30%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI T ++ L+P
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRTMAQVDALHPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 119 SMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPALLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A+YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +L+ T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVLERMA-TTGVDIISLDWTVDMAEALARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 298 PEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGASFFRSGKS 343
>gi|296273758|ref|YP_003656389.1| uroporphyrinogen decarboxylase [Arcobacter nitrofigilis DSM 7299]
gi|296097932|gb|ADG93882.1| uroporphyrinogen decarboxylase [Arcobacter nitrofigilis DSM 7299]
Length = 343
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 117/337 (34%), Positives = 188/337 (55%), Gaps = 5/337 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R + NFL++C+ P+ E+T+QP+
Sbjct: 5 FVDACFRKPTPYTPVWMMRQAGRYLPEYMKVRAQAGNFLNLCHNPKLAAEVTIQPLDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI + +G ++ F++ EGP DPI T+ + L ++++
Sbjct: 65 VDAAILFSDILVIPNEMGMHLEFIKGEGPIFKDPIKTEAEVDALLGGSEAADKLTYVYET 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +L+++LP LIGF GAPWT+A+YMI G K + + Y N + +L +++
Sbjct: 125 IKLLKQQLPEDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSNPELLHKILKKVTE 184
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V Y+ QI AG DV+QIFD+ A + +++ ++ + + I ++ KYP+ I F
Sbjct: 185 VVKLYMENQIKAGADVVQIFDSWAAAIEPAKYDEFSWKYMVEIADYLKEKYPHIPIIMFP 244
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + + G+DW P++ A E L + +QGN++P RL + V
Sbjct: 245 KGVPAFLD--KVYGNFDVFGVDWGTPMALAKEKLGDKYVLQGNMEPCRLY-SKEATTMCV 301
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
A+ +++ IFNLGHGI P V +N + VK +
Sbjct: 302 EALQNIMQGDGHIFNLGHGILPDVPVENAIHFVKECQ 338
>gi|16975230|pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 101/344 (29%), Positives = 178/344 (51%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L+ ++G + PP+WLMRQAGRY+ Y+ + +K+ F D + VE++LQ
Sbjct: 9 NATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQ 68
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + ++ +GP DP+ T + +
Sbjct: 69 PWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREF-IPEKSV 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ILRK++ N ++GF GAP+T+ASY++ GG K+ + + A+ + + L
Sbjct: 128 PYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ +V+ +PN
Sbjct: 188 LQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNL 247
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L +QGN+DP L +
Sbjct: 248 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKE 306
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +N + G G I NLGHGI +N + +
Sbjct: 307 FITNRINDTVKKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKG 350
>gi|126695947|ref|YP_001090833.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9301]
gi|166234267|sp|A3PBV7|DCUP_PROM0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|126542990|gb|ABO17232.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9301]
Length = 346
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 106/348 (30%), Positives = 181/348 (52%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI T +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLKELSPS-ES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + ++ L+K + N T++GF GAPWT+A+Y++ G K++ + A+ +
Sbjct: 120 LSFVGEVLTSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNKPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ +YP
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVEIVKAEYPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGN 298
I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L
Sbjct: 240 TPIILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + + +I NLGHGI P +N + +K+
Sbjct: 299 ESIKERIDNTFNKIKDRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|255941102|ref|XP_002561320.1| Pc16g10100 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585943|emb|CAP93680.1| Pc16g10100 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 363
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 119/353 (33%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHEAKGG-RDFFECCRSPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMVVEMVDKKGPHFPEPLDSPTDGQYEKVMAKKVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 128 AELDYVYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGSKLFVQSKKWVYKYPTEA 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + ++
Sbjct: 188 QALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L + + N +GLDW + A+ + +QGN DP
Sbjct: 248 QEMGLEPVPMTVFAKGAWYALDDLCD-SGYNVVGLDWLHDAAEAMRIANGRVTIQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + V +++ G +I NLGHG+TP VDP+N+ + +
Sbjct: 307 GMLYGGPPAITATVEPMVEGFKKGKQGWICNLGHGVTPFVDPENLKFFFEEIH 359
>gi|219115715|ref|XP_002178653.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217410388|gb|EEC50318.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 409
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 104/354 (29%), Positives = 180/354 (50%), Gaps = 12/354 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + ++ +G P+W+MRQAGR++ EYR + KK+ F + PE VE++LQ
Sbjct: 55 STQDPLLIRAARGEKTERTPVWMMRQAGRHIAEYRDLCKKYPTFRERSEIPEVAVEVSLQ 114
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P R Y D ILFSDIL +G E GP M+P+ + + +D + +
Sbjct: 115 PWRNYQTDGCILFSDILTPLPGIGCEFTIDEKVGPLMEPMRSYDDIKKMHPMDPYKS-TP 173
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +++ LR+++ ++GF G P+T+A+Y++ G K++ + + A + +L
Sbjct: 174 FVAEALKALRQEVGPETAVLGFVGCPYTLATYIVEGKTSKEYLEIKKMALNEPDLLHAIL 233
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+D +Y + QI G +IQIFD+ AG L ++ +AA +I+ ++ KYP+
Sbjct: 234 QQLADNIGDYALFQIENGAQLIQIFDSWAGHLSPRDYNTFAAPYQKQILDKIKEKYPDVP 293
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----------LQKEGPVQGNLDP 291
+ + K +G +++ T + + LDW+V ++ + L+ G VQGNLDP
Sbjct: 294 TVIYIKHSGALIERMAA-TGVDVVSLDWTVDMADGRDRIEAGRKSAGLEGRGGVQGNLDP 352
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + V+ + IL GS + NLGHGI +N ++TVR +
Sbjct: 353 AVLFANHDVIEERAIEILKKAGSVGHVMNLGHGIEAATPEENAHHFIETVRGYR 406
>gi|307297040|ref|ZP_07576856.1| uroporphyrinogen decarboxylase [Sphingobium chlorophenolicum L-1]
gi|306877566|gb|EFN08794.1| uroporphyrinogen decarboxylase [Sphingobium chlorophenolicum L-1]
Length = 353
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 133/340 (39%), Positives = 201/340 (59%), Gaps = 6/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL+G PP+WLMRQAGRYLPEYR +R + FL++ Y E+TLQP+RR
Sbjct: 15 KPLLSVLKGACPVVPPMWLMRQAGRYLPEYRALRAEKGGFLELVYDSAAAAEVTLQPLRR 74
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ FD AILFSDIL++ A+G+++ F EGPR+ PI ++ L P+ + ++
Sbjct: 75 FGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSALKPD----FSRYEAVY 130
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++ L +T +GF G+PWT+A+YM++G KD G R AY F +++ +
Sbjct: 131 ETVRQVKAALDPDVTFLGFAGSPWTIATYMVAGQGSKDQGAARRMAYSQPEKFGAIIEAI 190
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + YL QI AGV+ +Q+FD+ AG L EFE + R RI+ ++ +P+ I
Sbjct: 191 VDATLVYLSGQIEAGVEAVQLFDSWAGSLAPLEFERWVIRPNRRIVERLKAIHPDIPVIG 250
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KGAG L +Y T +A+G+D +V +A + +G PVQGNLDP+ L+ G + + +
Sbjct: 251 FPKGAGAKLADYAAGTGVDAVGVDETVDPHWANRVLPQGLPVQGNLDPLALIAGGKAVEE 310
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ I P IFNLGHGI P +V L+ VR+
Sbjct: 311 AVDNIRAAFAGRPHIFNLGHGILPDTPIDHVEALLSYVRA 350
>gi|290956582|ref|YP_003487764.1| uroporphyrinogen decarboxylase [Streptomyces scabiei 87.22]
gi|260646108|emb|CBG69201.1| uroporphyrinogen decarboxylase [Streptomyces scabiei 87.22]
Length = 359
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 177/343 (51%), Gaps = 10/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+
Sbjct: 20 QNSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVRQGIG-MLDSCMRPELVTEITLQPV 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAI FSDI+V A+G ++ GP ++ PI ++ L DL +
Sbjct: 79 RRHHVDAAIYFSDIVVPLKAIGVDLDIKPGVGPVVEKPIRSRAD--LAQLRDLTPEDVSY 136
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++I +L +L I LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 137 VTEAIGMLTAEL-GEIPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLD 195
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +++ +L QI AG +Q+FD+ AG L ++ + ++ AV
Sbjct: 196 RLAGITSAFLRVQIEAGASAVQLFDSWAGALAPADYRRSVLPASAKVFDAVAGY--GVPR 253
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 254 IHFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPTVLFAGTEAV 312
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+LD +FNLGHG+ P DP ++ LV+ V +
Sbjct: 313 EAKTREVLDAAAGLEGHVFNLGHGVMPSTDPDSLTRLVEYVHT 355
>gi|33862718|ref|NP_894278.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9313]
gi|45476860|sp|Q7V8B4|DCUP_PROMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33634634|emb|CAE20620.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9313]
Length = 352
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ + +L +G + P+W+MRQAGRY+ YR +R ++ +F + P+ + ++++
Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + VE++GP + PI + +I L P
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNAT- 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 120 -MPFVGEVLGRLRESVGNKAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA R++ V+ +P
Sbjct: 179 RLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ R T + I LDW+V ++ L + VQGN+DP L
Sbjct: 239 DTPMILYISGSAGVLERMGR-TGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + + + + I NLGHGI P N +T
Sbjct: 298 PEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNAKVFFET 340
>gi|124023536|ref|YP_001017843.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9303]
gi|166234269|sp|A2CAR8|DCUP_PROM3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123963822|gb|ABM78578.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9303]
Length = 352
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 178/343 (51%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ + +L +G + P+W+MRQAGRY+ YR +R ++ +F + P+ + ++++
Sbjct: 1 MSDSQPLLLRAARGESVERTPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPDLSYQISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + VE++GP + PI + +I L P
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIVESKGPLIQKPIRSLSQIEALQPLEPNAT- 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 120 -MPFVGEVLGRLRESVGNRAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQQPDLLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA R++ V+ +P
Sbjct: 179 RLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKRVVDLVKSTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ R T + I LDW+V ++ L + VQGN+DP L
Sbjct: 239 DTPMILYISGSAGVLERMGR-TGVDIISLDWTVDMADGCARLPEHLGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + + + + I NLGHGI P N +T
Sbjct: 298 PEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNAKVFFET 340
>gi|78778968|ref|YP_397080.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9312]
gi|123755109|sp|Q31BV1|DCUP_PROM9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78712467|gb|ABB49644.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9312]
Length = 346
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 106/348 (30%), Positives = 182/348 (52%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G + PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVTRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI T +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLSQIESLKEL-NPSES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ +YP+
Sbjct: 180 LLDHFAKSIGEYLKFQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEYPD 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I + G+ +++ + T + I LDW+V + A + E +QGN+DP L
Sbjct: 240 TPVILYISGSAGVIERMAK-TGVDIISLDWTVDIEEACKRIPDEIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + + +I NLGHGI P +N + +K+
Sbjct: 299 ESIKERIDDTFNKIKDRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|115388489|ref|XP_001211750.1| uroporphyrinogen decarboxylase [Aspergillus terreus NIH2624]
gi|114195834|gb|EAU37534.1| uroporphyrinogen decarboxylase [Aspergillus terreus NIH2624]
Length = 395
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 116/353 (32%), Positives = 190/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LT+QP+
Sbjct: 41 KNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHEAKGG-RDFFECCRSPEIASTLTIQPV 99
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + ++
Sbjct: 100 ERYAGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLKSPDDGQYERVMAKAVDVQ 159
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 160 AELDYVYKAITLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWIYKYPKES 219
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL ++++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + + +K
Sbjct: 220 QALLLKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPATFKAFSLPYLRHISANLPKKL 279
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A+ + +QGN DP
Sbjct: 280 KEMGLEPVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAMRVANGRVTIQGNADP 338
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + V +++ G +I NLGHG+TP V P+++ + +
Sbjct: 339 GVLYGGRAAITEAVEIMVEGFKKGKQGWIANLGHGVTPFVKPEDLKFFFEEIH 391
>gi|212640102|ref|YP_002316622.1| uroporphyrinogen decarboxylase [Anoxybacillus flavithermus WK1]
gi|212561582|gb|ACJ34637.1| Uroporphyrinogen-III decarboxylase [Anoxybacillus flavithermus WK1]
Length = 349
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 117/348 (33%), Positives = 186/348 (53%), Gaps = 9/348 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + L +G P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 3 MMIKNDTFLRACRGEATEYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTR 61
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ +YN DAAIL+ DI+ A+G +V GP + +PI + ID N
Sbjct: 62 LPVEQYNVDAAILYKDIMSPLPAIGVDVDIKAGIGPVIDNPIRSLADVERLGEIDPE-ND 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I +L K+ + LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 121 VPYVLETIRLLTKE-QLTVPLIGFAGAPFTLASYMIEGGPSKNYNKTKAFMYAEPKAWFA 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L D++ Y+ AQI AG IQIFD+ G + ++ + ++ RI +A+R ++
Sbjct: 180 LMDKLGDMTIRYVKAQIRAGASAIQIFDSWVGAVNVSDYRQFIKPTMERIFTALRDEH-- 237
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ K + L + +GLDW + + A E+ +QGNLDP L+ +
Sbjct: 238 VPLIMFGVGASHLAKEWHDLP-LDVVGLDWRLSIREAREMGLTKALQGNLDPAVLLAPWE 296
Query: 300 VMIDGVNAILDV--LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ V ILD G ++FNLGHGI PQ+ P+ + L +
Sbjct: 297 VIEARVKQILDEGMAHEGGYVFNLGHGIFPQIKPETLKRLTAFIHDYS 344
>gi|114326666|ref|YP_743823.1| uroporphyrinogen decarboxylase [Granulibacter bethesdensis CGDNIH1]
gi|122328348|sp|Q0BWA2|DCUP_GRABC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114314840|gb|ABI60900.1| uroporphyrinogen decarboxylase [Granulibacter bethesdensis CGDNIH1]
Length = 343
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 141/343 (41%), Positives = 211/343 (61%), Gaps = 6/343 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ IL VL+G + PP+WLMRQAGRYLPEYR++R K +FL + PE+ E+TLQPIR
Sbjct: 2 NKPILRVLRGEALPVPPVWLMRQAGRYLPEYREVRAKAGSFLGLATHPEWAAEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ DAAILFSDIL++ ALG + F E EGP + + +I L + + + PI
Sbjct: 62 RFGMDAAILFSDILMLPWALGYGLHFAEGEGPVLPKLEEADIDRL--DFSQLIPRIAPIM 119
Query: 125 QSISILRKKLP---NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++++ +R++L TLIGF GAP+TV+ YM+ GG K+ + R FAY N AF+ L+
Sbjct: 120 ETVTRVREQLQQLHPETTLIGFAGAPFTVSCYMVDGGGAKEFPRTRHFAYTNPEAFDRLI 179
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L++ + YL AQ+ AG +V+ +FD+ AG L F + +I +A++ ++P+
Sbjct: 180 ARLTEATITYLSAQVEAGAEVLMLFDSWAGLLSPLSFARWVTAPARQITAALKARHPSVP 239
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQV 300
I F + AG +L+NY T NA+G+D SV + A ++ E +QGNLDP+ L G +
Sbjct: 240 VIGFPRLAGTLLQNYASETGVNAVGMDTSVDPAMARKMVPAEIALQGNLDPLALRAGGEA 299
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
M V++I + P IFNLGHGI PQ P++V +L+ +R+
Sbjct: 300 MRREVSSIRQAMAGHPHIFNLGHGIVPQTPPEHVAELLNLIRT 342
>gi|254585929|ref|XP_002498532.1| ZYRO0G12518p [Zygosaccharomyces rouxii]
gi|238941426|emb|CAR29599.1| ZYRO0G12518p [Zygosaccharomyces rouxii]
Length = 368
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 116/352 (32%), Positives = 186/352 (52%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP W+MRQAGRYLPEY + + ++F ++C E E+T+QP+
Sbjct: 13 KNDLILRAARGETVERPPCWIMRQAGRYLPEYHKAK-GNRDFFEICRDAEVASEITIQPV 71
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
+RY DAAI+FSDILVI A+G V +E +GP +P+ T+E + + L
Sbjct: 72 KRYAGLLDAAIIFSDILVIPQAMGMKVEMLEGKGPHFPEPLRTKEDAQKVLDYKVDVLKE 131
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ RKKL + L GFCG PWT+ YM GG K + + Q +
Sbjct: 132 LDWAFRAITLTRKKLDGQVPLFGFCGGPWTLLVYMTEGGGSKMFKFAKEWINQYPDICHQ 191
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL +DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I S V ++
Sbjct: 192 LLQKTTDVAIEFLSQQVIAGAQILQVFESWGGELSPADFDEFSLPYLKQISSKVPQRLQE 251
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+ + FAKG+ Y L + NA+ LDW + A ++ Q +QGNLDP
Sbjct: 252 LGHKEHVPMVVFAKGSWYALDKLCGI-GYNAVSLDWLWNPADACKINQGRVTLQGNLDPG 310
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V ++ G G +I N GHG P +DP+ + ++
Sbjct: 311 IIYGSDEVITKRVETMIKQFGGGKSHYIVNFGHGTHPFMDPEKIRHFLQECH 362
>gi|255071125|ref|XP_002507644.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522919|gb|ACO68902.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 391
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 105/347 (30%), Positives = 181/347 (52%), Gaps = 5/347 (1%)
Query: 2 NERKQKI-LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + L ++G + PPIW+MRQAGRY+ Y+ + K+ F + + VE++L
Sbjct: 46 SATNDPLMLRAIRGEKVERPPIWMMRQAGRYMKIYQDLCKRHPTFRERSEKVDLAVEISL 105
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL + V+ GP + +P+ + E ++ +
Sbjct: 106 QPWEAFQPDGVILFSDILTPLSGMNIPFDIVKGTGPIIMNPVRSMEDVKTINALEPEKS- 164
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +++ +LR+++ N+ T++GF GAP+T+ASY++ GG + + A+ ++
Sbjct: 165 VPFVGEALGLLRQEVGNNATVLGFVGAPFTLASYIVEGGTSTHYKVIKKMAFDAPDVYHA 224
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL ++D EY+ Q +G V+QIFD+ A +FENY + RI+ V+ +P+
Sbjct: 225 LLSSITDSVVEYVKYQADSGAQVVQIFDSWASEFCPADFENYCLPYLKRIVDEVKVTHPD 284
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I +A G+G +L+ + T ++ I LD +V + A L E VQGN+DP+ L
Sbjct: 285 LPLILYASGSGGLLERL-QTTGADVISLDGTVDMEDARRRLGPEQAVQGNIDPVTLFASK 343
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ D V + G + NLGHG+ ++V KTVR +
Sbjct: 344 EVITDRVLQTIQKAGDKKHVVNLGHGVMQGTPEEHVAHFFKTVRDFR 390
>gi|116070841|ref|ZP_01468110.1| uroporphyrinogen decarboxylase [Synechococcus sp. BL107]
gi|116066246|gb|EAU72003.1| uroporphyrinogen decarboxylase [Synechococcus sp. BL107]
Length = 352
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 103/343 (30%), Positives = 183/343 (53%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + E + L P
Sbjct: 61 QPFEAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LRK + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 TLLNHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F+ + G+ +L+ R T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFVLYISGSAGVLERMAR-TGVDIISLDWTVDMAEACARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ ++ + I NLGHGI P +N ++
Sbjct: 298 PDAIQARIDDTVRKARGRRHILNLGHGILPGTPEENGEAFFRS 340
>gi|58580865|ref|YP_199881.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188578158|ref|YP_001915087.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|75508283|sp|Q5H3H5|DCUP_XANOR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058176|sp|B2SKP7|DCUP_XANOP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58425459|gb|AAW74496.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188522610|gb|ACD60555.1| uroporphyrinogen decarboxylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 354
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 119/349 (34%), Positives = 185/349 (53%), Gaps = 12/349 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L ++ P+WLMRQAGRYLPEYR R + +FL M P+ E+TLQP+
Sbjct: 3 KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+R+ DAAILFSDIL I DA+G + FVE EGP+ P+ D+ L
Sbjct: 63 QRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETE-LRY 121
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++R++L + LIGF G+PWT+A YMI GG K++ + + A+ + LL
Sbjct: 122 VMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLG 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNA 240
++D YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 182 TVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAERT 241
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
+ F KG G + + + + A+G+DW++ L+ A + +QGNLDP L +
Sbjct: 242 PLVLFGKGNGAYVADLAA-SGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPE 300
Query: 300 VMIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD G + NLGHG++P ++P++V LV+ V+
Sbjct: 301 AIRTEVGKTLDSYAQGNGGSREGHVLNLGHGMSPDMNPEHVGVLVEAVQ 349
>gi|118138487|pdb|2INF|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138488|pdb|2INF|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138489|pdb|2INF|C Chain C, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
gi|118138490|pdb|2INF|D Chain D, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Bacillus Subtilis
Length = 359
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 11/350 (3%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R + L+ +G + P+W MRQAGR PEYR++++K+ F ++ + PE
Sbjct: 7 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-EITHQPELCAY 65
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + ID
Sbjct: 66 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 125
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + ++I +L + ++ LIGF GAP+T+ASYM GG K++ + + F Y A
Sbjct: 126 -QDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDA 183
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S + ++
Sbjct: 184 WNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE 243
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ ++ L + +GLDW + + A VQGNLDP L+
Sbjct: 244 --NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLA 300
Query: 297 GNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 301 PWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYS 350
>gi|86609317|ref|YP_478079.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123501882|sp|Q2JKH3|DCUP_SYNJB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86557859|gb|ABD02816.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 346
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 115/337 (34%), Positives = 175/337 (51%), Gaps = 2/337 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++L +G V++ PP+W+MRQAGRY+ YR+++ K+ F C PE VE++LQP R
Sbjct: 3 DRLLRAARGEVLDRPPVWMMRQAGRYMAAYRELQSKY-TFKQRCEIPELAVEISLQPFRA 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ D ILFSDIL + +G VE++GP +DP + + + L I
Sbjct: 62 FAPDGVILFSDILTPLEGMGIPFELVEHQGPIIDPPIRSQAQIERIRLLEPEESLPFIKT 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+S LR+++ TL+GF G+PWT+A Y + G KD+ + A+ + LL L+
Sbjct: 122 ILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFAQPPLLHQLLSKLA 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A Y+I QI G V+Q+FDT AG L ++E +A +I+ V+ +YP I +
Sbjct: 182 DSIARYVIYQIEGGAQVVQLFDTWAGQLSPVDYECWALPYQKQIVDQVKARYPQVPLILY 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G+ +L+ + + LDW ++ A VQGNLDPM L+ + +
Sbjct: 242 INGSAALLERVGK-AGIDVFSLDWMSDMAEARARLGSLAVQGNLDPMVLLGSPEFIRQRT 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ GS I NLGHGI P NV +TVR
Sbjct: 301 LEVIRKAGSRGHIMNLGHGIHPSTPEANVHYFFETVR 337
>gi|78184493|ref|YP_376928.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9902]
gi|123581675|sp|Q3AYE3|DCUP_SYNS9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|78168787|gb|ABB25884.1| uroporphyrinogen decarboxylase [Synechococcus sp. CC9902]
Length = 352
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 104/346 (30%), Positives = 185/346 (53%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDTLPLLLRAARGESVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + E + L P
Sbjct: 61 QPFEAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQIGDPIRSMEQVKALRPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LRK + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLGRLRKTVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 TLLNHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ F+ + G+ +L+ R T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFVLYISGSAGVLERMAR-TGVDIISLDWTVDMAEACARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ + I NLGHGI P +N ++ +S
Sbjct: 298 PDAIQARIDDTVRKARGRRHILNLGHGILPGTPEENGAAFFRSGKS 343
>gi|325672646|ref|ZP_08152342.1| uroporphyrinogen decarboxylase [Rhodococcus equi ATCC 33707]
gi|325556523|gb|EGD26189.1| uroporphyrinogen decarboxylase [Rhodococcus equi ATCC 33707]
Length = 355
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L G + P+W MRQAGR LPEYR+IR L+ C+ PE E+T+QP+R
Sbjct: 15 DAPLLAAATGRPVKHRPVWFMRQAGRSLPEYREIRAGIG-MLESCFDPELVCEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ T P L + + +
Sbjct: 74 RHKVDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPVRTVADVAALPR--LVPDEVGAV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL
Sbjct: 132 AQAVRLLTAEL-GETALIGFAGAPFTLASYLVEGGPSRNHERTKALMHADPKTWHALLGR 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++DV+ +L AQ+HAGVD +Q+FD+ AG L E+ + R+ + V + I
Sbjct: 191 ITDVTIAFLQAQLHAGVDAVQLFDSWAGALSLAEYREFVLPHSERVFAEVESAH--VPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +
Sbjct: 249 HFGVGTGELLSAMGE-AGADVVGVDWRIPLDVAARRVGPGKALQGNLDPAVLFAGWDAVE 307
Query: 303 DGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + IFNLGHG+ P DP + D+V+ V S
Sbjct: 308 REVRRICREADAALAAGATGHIFNLGHGVLPDTDPAVLTDVVELVHS 354
>gi|257060909|ref|YP_003138797.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8802]
gi|256591075|gb|ACV01962.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 8802]
Length = 354
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 108/347 (31%), Positives = 184/347 (53%), Gaps = 8/347 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + +L +G +++ PP+W+MRQAGRY+ YR +R K+ +F D + +E+
Sbjct: 1 MTQGNNTPYLLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRDRSENADLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFL 117
+LQP + + D I+FSDIL +G + E++GP +D PI TQE ++D
Sbjct: 61 SLQPWKAFRPDGVIMFSDILTPLPGIGISFEIPESKGPMIDSPIRTQEQVDNLHSLDPEA 120
Query: 118 NYLLPIFQSI-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ LP ++I LR ++ N T++GF G+PWT+A+Y I G KD+ + A+
Sbjct: 121 S--LPFIKTILKALRDEVKNEATVLGFVGSPWTLAAYAIEGKSSKDYANIKRMAFCEPAI 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L L+D A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+
Sbjct: 179 LHQFLSKLADAIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYKVFALPYQQQVVRQVKAT 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
+P+ I + G+ +L+ + + + + +DW+V ++ A L + VQGN+DP L
Sbjct: 239 HPDTPLILYISGSAGVLELMGQ-SGVDIVSVDWTVDMADARQRLGRNMMVQGNIDPGILF 297
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
QV+ D + + G G I NLGHG+ +NV +T +
Sbjct: 298 GSKQVIRDRILDTVQKAGKGGHILNLGHGVLVGTPEENVGYFFETAK 344
>gi|294497388|ref|YP_003561088.1| uroporphyrinogen decarboxylase [Bacillus megaterium QM B1551]
gi|294347325|gb|ADE67654.1| uroporphyrinogen decarboxylase [Bacillus megaterium QM B1551]
Length = 347
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P+
Sbjct: 7 NDTFLKACRGEKTDHVPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPELGAYVTRLPVE 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ ++G +V GP + +PI + I + +
Sbjct: 66 QYGVDAAILYKDIMSPLPSIGVDVEIKSGIGPVISNPIQSLSDVEKLGEITPE-EDVPYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L + ++ LIGF GAP+TVASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 LDTIKLLTTE-QLNVPLIGFAGAPFTVASYMIEGGPSKNYNKTKAFMYTEPKAWFALMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQI AG IQIFD+ G L ++ + + RI +++R K N I
Sbjct: 184 LADMTITYVKAQIDAGAKAIQIFDSWVGALNVADYRYFIKPVMERIFTSLREK--NVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW L A L +QGNLDP L+ +V+ +
Sbjct: 242 MFGVGASHLAKEWHDLP-LDVVGLDWRTQLDEARALGLTKTLQGNLDPAILLAPWEVIEE 300
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + S +IFNLGHG+ PQV P+ + L +
Sbjct: 301 RVTEILDKGMASPGYIFNLGHGVFPQVQPETLKRLTTFIHEYS 343
>gi|154149184|ref|YP_001406819.1| uroporphyrinogen decarboxylase [Campylobacter hominis ATCC BAA-381]
gi|166234241|sp|A7I2S8|DCUP_CAMHC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|153805193|gb|ABS52200.1| uroporphyrinogen decarboxylase [Campylobacter hominis ATCC BAA-381]
Length = 340
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 180/339 (53%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R + FL++C + E+T+QP+
Sbjct: 3 FIDACLKKKTPYTPVWMMRQAGRYLPEYMKVRNEVGGFLELCKNYKKASEVTIQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILVI +G ++ F++ EGP + E L ++ + L ++ +I
Sbjct: 63 VDAAILFSDILVIPLEMGMDLHFIKGEGPIFESPVKNENDLAKLSLQKAVKNLQYVYDTI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S+ R+KLP LIGFCGAPWT+A+YMI G K + + Y N + +L +++
Sbjct: 123 SLTREKLPKDKALIGFCGAPWTIATYMIEGKGSKTYSVCKKLLYTNPEFLHKILTLITET 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI +GV+ +QIFD+ A L F ++ + + I ++ KYP I F K
Sbjct: 183 LKLYLENQIKSGVNTVQIFDSWASALECEAFFEFSWKYIIEICDFIKAKYPQIPIIVFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS PL A ++ + +QGN++P RL + + V
Sbjct: 243 GISGYLDKI--YGNFDVFGVDWSTPLESASKILSAKYTLQGNMEPCRLY-NKNAIKESVE 299
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+ + P IFNLGHGI P + +N ++ V+
Sbjct: 300 QILNTMKGKPHIFNLGHGILPDIPVENAKYFIRLVQERS 338
>gi|296332434|ref|ZP_06874895.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305673714|ref|YP_003865386.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296150352|gb|EFG91240.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305411958|gb|ADM37077.1| uroporphyrinogen decarboxylase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 353
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 119/350 (34%), Positives = 184/350 (52%), Gaps = 11/350 (3%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R + L+ +G + P+W MRQAGR PEYR++++K+ F D+ + PE
Sbjct: 1 MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLF-DITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+T P+ +Y DAAIL+ DI+ ++G +V GP +D PI + ID
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPE 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y A
Sbjct: 120 -QDVPYVLETIKLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDA 177
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+N L+ L+D+ Y+ AQI AG IQIFD+ G L + ++ Y + RI S + +
Sbjct: 178 WNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAEE 237
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
N I F GA ++ ++ L + +GLDW + + A VQGNLDP L+
Sbjct: 238 --NVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLSIDEARSKGITKTVQGNLDPSILLA 294
Query: 297 GNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ ILD + S FIFNLGHG+ P V P+ + L V
Sbjct: 295 PWEVIEKKTTEILDQGMKSDSFIFNLGHGVFPDVSPEVLKKLTAFVHKYS 344
>gi|182680469|ref|YP_001834615.1| uroporphyrinogen decarboxylase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636352|gb|ACB97126.1| uroporphyrinogen decarboxylase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 350
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 163/338 (48%), Positives = 217/338 (64%), Gaps = 1/338 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L+V QG + + PP+WLMRQAGRYLPEY+ IR + +FLD CY P E TLQPIRR
Sbjct: 14 KPLLDVCQGKIFSKPPVWLMRQAGRYLPEYQAIRAQSASFLDFCYNPLAASEATLQPIRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAILFSDILVI DALG+ VRF + EGPR++PI T + +L + LN L P+F+
Sbjct: 74 FGFDAAILFSDILVIPDALGQKVRFEQGEGPRLEPIATLDDFLRLRET-IDLNLLAPVFE 132
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + K LP LIGFCGAPWTVASYMI+G D R+FAY + F L+D L
Sbjct: 133 TVDRVAKALPPATALIGFCGAPWTVASYMIAGRGTPDQAPARLFAYHHRDLFQRLIDRLV 192
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
S +YL Q AGV+++QIFD+ AG L + E+E + + I+ VR++YP AK I F
Sbjct: 193 AASVDYLSRQFEAGVEIVQIFDSWAGVLPQSEYEAWCLEPIRAIVEGVRQRYPGAKIIGF 252
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
+G G L+++ ++T + +GLD S L+FA L QGNLDP+ L+ G + + GV
Sbjct: 253 PRGIGSRLESFAKITGVDVLGLDTSAELTFAAGLDPRLVFQGNLDPLALLAGGEALERGV 312
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
AIL L PFIFNLGHGI P +V LV +R+
Sbjct: 313 AAILSDLQGRPFIFNLGHGILPTTPIAHVERLVALLRA 350
>gi|302849420|ref|XP_002956240.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300258543|gb|EFJ42779.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 395
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 106/339 (31%), Positives = 171/339 (50%), Gaps = 5/339 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G + P W+MRQAGRY YR++ KK +F + T E VE++LQP
Sbjct: 48 QDPLMVRAARGEKVERAPCWMMRQAGRYQKSYRELAKKHPSFRERSETTELIVEISLQPW 107
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+ D ILFSDIL +G N +N+GP +D PI + E +D +
Sbjct: 108 NSFRPDGVILFSDILTPLPGIGVNFDIDDNKGPIIDTPIRSLEQVKQLHEMD--FGKVDF 165
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ LR ++ N ++GF G+PWT+A+Y+I GG + + + + LL
Sbjct: 166 VGRALTQLRAEVNNQAAVLGFVGSPWTLATYLIEGGSTSLYKTIKTMCFSAPDVLDALLT 225
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D A Y+ QI AG +QIFD+ G L E+E ++ + RII++V+ +YP
Sbjct: 226 KLADAMAAYIKYQIRAGAQCVQIFDSWGGQLPPREWEKWSGPYLKRIIASVKAEYPTVPL 285
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
+A G+G +L+ T ++ +G+DW+ +S A + VQGN+DP L +
Sbjct: 286 TLYANGSGGLLERLAA-TGADVVGVDWTTDMSDARRRIDSNVSVQGNVDPAILFASKDAI 344
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
D V L G I NLGHG+ + V +
Sbjct: 345 EDAVRDCLRKAGGNRHILNLGHGVLVGTPEEGVAHMFDL 383
>gi|119496773|ref|XP_001265160.1| uroporphyrinogen decarboxylase [Neosartorya fischeri NRRL 181]
gi|119413322|gb|EAW23263.1| uroporphyrinogen decarboxylase [Neosartorya fischeri NRRL 181]
Length = 364
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 114/353 (32%), Positives = 188/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LT+QP+
Sbjct: 9 KNDLLLRAARGERVPRPPIWVMRQAGRYLPEYHEAK-GNRDFFECCRNPEIASTLTIQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL--- 117
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + +
Sbjct: 68 DRYAGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVNVK 127
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 128 EELDYVYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKTWIYKYPKES 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ +G ++Q+FD+ AG + F+ ++ + I + + ++
Sbjct: 188 QALLQKIAEICVEYLALQVASGAQLVQVFDSWAGEMSPAAFKTFSLPYLRYISANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A+++ K +QGN DP
Sbjct: 248 DAMGLERVPMTVFAKGAWYALEDLCG-SGYNVVGLDWLHDPAEAMQIAKGRVTIQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + + V ++ G +I NLGHGITP V P ++ + +
Sbjct: 307 GILYGSREAITEAVEVMVKGFQGGKQGWIANLGHGITPFVKPDDLKFFFEEIH 359
>gi|254431209|ref|ZP_05044912.1| uroporphyrinogen decarboxylase [Cyanobium sp. PCC 7001]
gi|197625662|gb|EDY38221.1| uroporphyrinogen decarboxylase [Cyanobium sp. PCC 7001]
Length = 352
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 103/341 (30%), Positives = 170/341 (49%), Gaps = 2/341 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++
Sbjct: 1 MAETAPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP R + D ILFSDIL +G + +E++GP ++P + L
Sbjct: 61 QPFRAFQPDGVILFSDILTPLPGMGIDFDIIESKGPIIEPAIRTRAQVDALRPLNPAEAL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + + LR + N ++GF GAPWT+A+Y + G K + + A+Q + L
Sbjct: 121 PFVGEVLGRLRADVGNAAAVLGFVGAPWTLAAYAVEGKSSKTYAVIKAMAFQEPALLHQL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D A Y+ QI +G V+Q+FD+ AG L +++ +AA R+I V+ +P+
Sbjct: 181 LGHLADSIATYVRYQIDSGAQVVQLFDSWAGQLSPIDYDVFAAPYQKRVIDQVKATHPDT 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I + G+ +L+ R T + + LDW+V ++ L + VQGN+DP L +
Sbjct: 241 PLILYISGSAGVLERMGR-TGVDIVSLDWTVDMADGCARLPQHVGVQGNVDPGLLFGSPE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + + + S I NLGHGI P N +T
Sbjct: 300 AIRERILDTVRKARSRRHILNLGHGILPGTPEDNARVFFET 340
>gi|149194365|ref|ZP_01871462.1| uroporphyrinogen decarboxylase [Caminibacter mediatlanticus TB-2]
gi|149135540|gb|EDM24019.1| uroporphyrinogen decarboxylase [Caminibacter mediatlanticus TB-2]
Length = 346
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 125/341 (36%), Positives = 184/341 (53%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++RKK NFLDM PE E+TLQPI +
Sbjct: 5 FIDACFGRETPYTPVWMMRQAGRYLPEYMEVRKKVGNFLDMTRNPEIVAEVTLQPIEILD 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL + +G ++RF + GP D E I L+PN D L +++
Sbjct: 65 VDAAILFSDILNLPMEMGLSLRFEKGVGPVFDKTIDSEKDIDNLDPNAD---EKLFYVYE 121
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I ++++LP + LIGF G+PWT+A+YM+ G K + + + Y N + LL F +
Sbjct: 122 GIKKIKERLPENKALIGFAGSPWTIATYMVEGRGSKQYAKIKKMVYSNPMLLHRLLAFNT 181
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EYL QI AG D + IFD+ L + +F ++ + I +++ YP I F
Sbjct: 182 KETIEYLSKQIEAGADAVMIFDSWGSALEKEKFFEFSWNYMKEIAKNIKQNYPTIPVIGF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVMIDG 304
+KG G + + + IG+DWSVP+ ++L + K+ +QGN+DP RL +
Sbjct: 242 SKGVGLYYPDM--DGEFDVIGVDWSVPMDYSLGIFKDNYTLQGNMDPTRLY-SKSATKEA 298
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V I ++ IFNLGHGI P V +N V +
Sbjct: 299 VEKIAKIMKGHRHIFNLGHGILPDVPVENAKYFVDLCKEVS 339
>gi|172045728|sp|Q5L284|DCUP_GEOKA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 345
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 182/342 (53%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T P+
Sbjct: 6 NDTFLRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTRLPVE 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G NV GP + +PI + + ID + + +
Sbjct: 65 QYGVDAAILYKDIMTPLPAIGVNVEIQGGIGPVIANPIRSLQDVERLGEIDPEHD-VPYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVSADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ILD + +IFNLGHGI P V P + L +
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLTAFIHEY 341
>gi|88809573|ref|ZP_01125080.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7805]
gi|88786323|gb|EAR17483.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 7805]
Length = 352
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 103/346 (29%), Positives = 187/346 (54%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R ++ +F + P+ + E+++
Sbjct: 1 MSDSLPLLLRAARGEAVERPPVWMMRQAGRYMKIYRDLRDRYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ +PI T ++ L+P
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIGEPIRTMAQVDALHPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A+Q +
Sbjct: 119 SMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFQEPALLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A+YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIAQYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +L+ T + I LDW+V ++ A L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVLERMA-TTGVDIISLDWTVDMAEALARLPEHIGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N ++ +S
Sbjct: 298 PEAIEARIDDCVRKARGRKHILNLGHGILPGTPEENGASFFRSGKS 343
>gi|88770678|gb|ABD51942.1| chloroplast uroporphyrinogen decarboxylase [Guillardia theta]
Length = 404
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 105/342 (30%), Positives = 176/342 (51%), Gaps = 2/342 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G + P+W+MRQAGR++ EYR++ KK+ F + PE E++LQP
Sbjct: 63 DPLLLRAARGEKVEMTPVWMMRQAGRHMQEYRELVKKYPTFRERSEIPEVATEISLQPWE 122
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
Y D ILFSDIL +G E GP++ P+ T+E + + +
Sbjct: 123 AYGVDGCILFSDILTPLPGMGVEFDIKETSGPKLKPLRTKEQIDTMKICSDWSTSMPFVK 182
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ LRK++ N T++GF G P+T+A+Y++ GG ++ + + Y N +L+ L
Sbjct: 183 QTLGELRKRVGNSATVLGFVGLPFTLATYLVEGGTSSEYLEIKKMMYYNPSLLTAMLENL 242
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ Y QI AG VIQIFD+ AG L +++ +A +++A+++K+P+ I
Sbjct: 243 AENIGNYANFQIEAGAQVIQIFDSWAGSLSPEDYDLFAFPYQKMVVNAIKKKHPDVPIII 302
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
+ +G ++ T + + LDW+V + A + ++ +QGNLDP L ++ +
Sbjct: 303 YIAKSGAHVERMAD-TGVDIVSLDWTVTIDEARRRIGRDIGLQGNLDPAILYGPEHIIKE 361
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+IL + I NLGHGI NV V TV + K
Sbjct: 362 RTESILKMAKGRHHIMNLGHGIEATTPQPNVKFFVDTVHAFK 403
>gi|317969675|ref|ZP_07971065.1| uroporphyrinogen decarboxylase [Synechococcus sp. CB0205]
Length = 352
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 100/346 (28%), Positives = 184/346 (53%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSSNAPLLLRAARGEQVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP++ DPI + ++ L P
Sbjct: 61 QPFNAFKPDGVILFSDILTPLPGMGIDFDIIESKGPQIQDPIRSMAQVEALTPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR+ + N ++GF GAPWT+A+Y++ G K++ + A++ + +
Sbjct: 119 TMPFVGEVLGRLRQSVGNEAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPQILH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIANYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +++ + T + + LDW+V ++ + + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVIERMAK-TGVDIVSLDWTVDMAEGLARMPEHIGVQGNVDPGLLFGS 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D ++ + I NLGHGI P +N + +S
Sbjct: 298 QDAIRDRIDDCVRKARGRKHILNLGHGILPGTPEENGQFFFEAGKS 343
>gi|70990812|ref|XP_750255.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus Af293]
gi|66847887|gb|EAL88217.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus Af293]
gi|159130730|gb|EDP55843.1| uroporphyrinogen decarboxylase [Aspergillus fumigatus A1163]
Length = 364
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 114/353 (32%), Positives = 189/353 (53%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C PE LT+QP+
Sbjct: 9 KNDLLLRAARGERVPRPPIWVMRQAGRYLPEYHEAK-GNRDFFECCRNPEIASTLTIQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL--- 117
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + +
Sbjct: 68 DRYAGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKEVNVK 127
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++++ Y+ +
Sbjct: 128 EELDYVYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFVQSKMWIYKYPKES 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ +G ++Q+FD+ AG + F+ ++ + I + + ++
Sbjct: 188 QALLQKIAEICVEYLALQVASGAQLVQVFDSWAGEMSPAAFKTFSLPYLRYISANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A+++ K +QGN DP
Sbjct: 248 DAMGLERVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAMQIAKGRVTIQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + + V ++ G +I NLGHGITP V P ++ + +
Sbjct: 307 GILYGSREAITEAVEVMVKGFQGGKQGWIANLGHGITPFVKPDDLKFFFEEIH 359
>gi|297531143|ref|YP_003672418.1| uroporphyrinogen decarboxylase [Geobacillus sp. C56-T3]
gi|297254395|gb|ADI27841.1| uroporphyrinogen decarboxylase [Geobacillus sp. C56-T3]
Length = 345
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 112/342 (32%), Positives = 182/342 (53%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T P+
Sbjct: 6 NDTFLRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTRLPVE 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G +V GP + +PI + + ID + + +
Sbjct: 65 QYGVDAAILYKDIMTPLPAIGVDVEIQGGVGPVIANPIRSLQDVERLGEIDPEHD-VPYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ILD + +IFNLGHGI P V P + L +
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLTAFIHEY 341
>gi|312139466|ref|YP_004006802.1| uroporphyrinogen decarboxylase heme [Rhodococcus equi 103S]
gi|311888805|emb|CBH48117.1| uroporphyrinogen decarboxylase HemE [Rhodococcus equi 103S]
Length = 355
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 182/347 (52%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L G + P+W MRQAGR LPEYR+IR L+ C+ PE E+T+QP+R
Sbjct: 15 DAPLLAAATGRPVKHRPVWFMRQAGRSLPEYREIRAGIG-MLESCFDPELVCEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ T P L + + +
Sbjct: 74 RHKVDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPVRTVADVAALPR--LVPDEVGAV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL
Sbjct: 132 AQAVRLLTAEL-GETALIGFAGAPFTLASYLVEGGPSRNHERTKALMHADPKTWHALLGR 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++DV+ +L AQ+HAGVD +Q+FD+ AG L E+ + R+ + V + I
Sbjct: 191 ITDVTIAFLQAQLHAGVDAVQLFDSWAGALSLAEYREFVLPHSERVFAEVESAH--VPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +
Sbjct: 249 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAARRVGPGKALQGNLDPAVLFAGWDAVE 307
Query: 303 DGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + IFNLGHG+ P DP + D+V+ V S
Sbjct: 308 REVRRICREADAALAAGATGHIFNLGHGVLPDTDPAVLTDVVELVHS 354
>gi|229491287|ref|ZP_04385113.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis SK121]
gi|229321826|gb|EEN87621.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis SK121]
Length = 365
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 179/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L G + P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+R
Sbjct: 25 DAPLLAAATGRTPSRRPVWFMRQAGRSLPEYREIRAGIG-MLESCFDPALVCEITMQPVR 83
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G ++ V GP + +PI + P L + I
Sbjct: 84 RHDVDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPIRSIADVAALPR--LVPEEVGAI 141
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL
Sbjct: 142 AQAVRLLTTEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHEKTKALMHSDPKTWHALLGS 200
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D + +L AQ+ AGVD +Q+FD+ AG L ++ + R+ + V I
Sbjct: 201 LADTTICFLQAQLKAGVDAVQLFDSWAGALSLADYREFVLPHSERVFAEVAAA--GVPRI 258
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +V+
Sbjct: 259 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAAGRVGPGKALQGNLDPAVLFAGPEVID 317
Query: 303 DGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + V+ V S
Sbjct: 318 REVRRIAAEGDRAIEAGAIGHIFNLGHGVLPDTDPTAITAAVELVHS 364
>gi|56419196|ref|YP_146514.1| uroporphyrinogen decarboxylase [Geobacillus kaustophilus HTA426]
gi|56379038|dbj|BAD74946.1| uroporphyrinogen decarboxylase [Geobacillus kaustophilus HTA426]
Length = 347
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 182/342 (53%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T P+
Sbjct: 8 NDTFLRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTRLPVE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G NV GP + +PI + + ID + + +
Sbjct: 67 QYGVDAAILYKDIMTPLPAIGVNVEIQGGIGPVIANPIRSLQDVERLGEIDPEHD-VPYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 126 FETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 185 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVSADDYRTFIKPAMARIFAALREE--GAPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 243 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 301
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ILD + +IFNLGHGI P V P + L +
Sbjct: 302 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLTAFIHEY 343
>gi|254421940|ref|ZP_05035658.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7335]
gi|196189429|gb|EDX84393.1| uroporphyrinogen decarboxylase [Synechococcus sp. PCC 7335]
Length = 354
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 106/340 (31%), Positives = 176/340 (51%), Gaps = 4/340 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L QG + PP+W+MRQAGRY+ YR +R+K+ +F D PE +E++LQ
Sbjct: 4 SNQTPLLLRAAQGQSVERPPVWMMRQAGRYMKAYRDLREKYPSFRDRSEIPEVAIEVSLQ 63
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDI+ +G + E +GP +D PI +Q +D +
Sbjct: 64 PWKAFKPDGVILFSDIVTPLPGMGVAMDVAEGKGPIIDEPIRSQAQIDALTTLDPD-ESM 122
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I + + LR+++ N T++GF GAPWT+A+Y++ G K + + A+ + L
Sbjct: 123 PYIRKILGALREEVGNQSTVLGFVGAPWTLAAYIVEGKGSKTYSVIKNMAFSRPEMLHSL 182
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L ++D A Y+ QI G V+Q+FD+ AG L +++ +A +I+ V+ +P+
Sbjct: 183 LSKIADNIAIYVRHQIDCGAQVVQLFDSWAGQLSPQDYKTFALPYQQQIVRQVKETHPDT 242
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I G+ +L+ + + + +DWSV ++ A L VQGN+DP L +
Sbjct: 243 PLILLVSGSAGVLELMGE-SGVDIVSVDWSVDMADARRRLGPNMMVQGNVDPGVLFGSKE 301
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
V+ D + + GS I NLGHGI P +N +
Sbjct: 302 VIRDRIIDTVRKAGSKGHILNLGHGILPGTPEENGAYFFE 341
>gi|37523446|ref|NP_926823.1| uroporphyrinogen decarboxylase [Gloeobacter violaceus PCC 7421]
gi|45476835|sp|Q7NEK2|DCUP_GLOVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|35214450|dbj|BAC91818.1| uroporphyrinogen decarboxylase [Gloeobacter violaceus PCC 7421]
Length = 347
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 179/342 (52%), Gaps = 5/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ + + PP+W+MRQAGRY+ EYR +R K+ F + C P+ VE++LQP
Sbjct: 2 TQSLLLDAARSKPVARPPVWMMRQAGRYMAEYRALRDKYG-FKERCENPDLAVEISLQPF 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLP 122
R + D I+FSDIL D +G VE+ GP +DP I T+E +D + L
Sbjct: 61 RAFRPDGVIMFSDILTPFDGMGIPFELVESRGPVIDPPIRTREQVEAVRPLDPEAS-LAF 119
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + LR+++ T++GF GAPWT+A+Y + G KD+ + A+ + LL
Sbjct: 120 VRTILQTLRREVGEAATVLGFVGAPWTLAAYAVEGKSSKDYALIKQMAFSEPDLLHALLT 179
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+D A Y+I QI +G +Q+FDT AG L ++ +A RI+ VR+ +P
Sbjct: 180 KFADAIARYVIFQIDSGAQAVQLFDTWAGQLNPADYRAFALPYERRIVEQVRQVHPETPL 239
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I + + +L++ + + + LDW+V ++ A L + VQGNLDP L+ +
Sbjct: 240 ILYINHSAGLLRHVGE-SGVDVMSLDWTVDMAEARAILGPDMAVQGNLDPCVLLGDQAQI 298
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ I++ G I NLGHGI P N +TV+S
Sbjct: 299 RSRILDIVEKAGPTGHIMNLGHGILPSTPEDNARFFFETVKS 340
>gi|138894243|ref|YP_001124696.1| uroporphyrinogen decarboxylase [Geobacillus thermodenitrificans
NG80-2]
gi|166234250|sp|A4IKU7|DCUP_GEOTN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|134265756|gb|ABO65951.1| Uroporphyrinogen decarboxylase [Geobacillus thermodenitrificans
NG80-2]
Length = 345
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 9/347 (2%)
Query: 1 MNER-KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M R L +G P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MTRRINDTFLRACRGEKTAYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ A+G +V GP + +PI + ID +
Sbjct: 60 RLPVEQYGVDAAILYKDIMTPLPAIGVDVEIRGGVGPVIANPIRSLHDVERLGEIDPEHD 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 120 -VPYVLETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R +
Sbjct: 178 ALMDKLAEMTIRYVKAQIQAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
A I F GA ++ + L + IGLDW + + A +QGNLDP L+
Sbjct: 236 GAPLIMFGVGASHLAHEWNDLP-LDVIGLDWRLSIREARRRGITKAIQGNLDPAVLLAPW 294
Query: 299 QVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + V ILD + +IFNLGHGI P V P + L +
Sbjct: 295 DVIEERVKRILDEGMEQPGYIFNLGHGIFPDVQPATLKRLTAFIHDY 341
>gi|218439622|ref|YP_002377951.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7424]
gi|226723868|sp|B7KKW4|DCUP_CYAP7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218172350|gb|ACK71083.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7424]
Length = 353
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 107/340 (31%), Positives = 185/340 (54%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G +E++GP +DP T Q+I L+P + D + ++ I
Sbjct: 70 PDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQQQIDHLHPFDPDQTVPFVKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LL L
Sbjct: 130 KT---LRQEVGNQSTVLGFVGAPWTLAAYAVEGKSSKTYSIIKSMAFSEPAILHQLLSKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMVASYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQQVVRQVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A L KE VQGN+DP L + D
Sbjct: 247 YISGSAGVLERMGK-SGVDMISVDWTVDMAEARQRLGKEMKVQGNIDPGVLFGSQSFIRD 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + G+ I NLGHG+ NV +T ++
Sbjct: 306 RIVDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAKN 345
>gi|254457507|ref|ZP_05070935.1| uroporphyrinogen decarboxylase [Campylobacterales bacterium GD 1]
gi|207086299|gb|EDZ63583.1| uroporphyrinogen decarboxylase [Campylobacterales bacterium GD 1]
Length = 346
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 124/340 (36%), Positives = 190/340 (55%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY +R + NFL++C+ P+ E+TLQPI
Sbjct: 5 FVDACFGKQTPYTPVWMMRQAGRYLPEYMAVRAEAGNFLNLCHDPKKACEVTLQPIDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI D +G ++ F++ GP+ + PI T+ D + L +F +
Sbjct: 65 VDAAILFSDILVIPDEMGMDLEFIKGFGPKFNDPIKTEADIDRLIGGDEAASKLTYVFDT 124
Query: 127 ISILRKKLP---NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
I ++++ L I LIGF GAPWT+A+YMI G K + + Y N + +L
Sbjct: 125 IKLIKEDLDKRGGEIALIGFTGAPWTLATYMIEGEGTKTYNLCKKMMYSNPALLHKILAK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++V Y+ QI AG+DV+QIFD+ A + +++ ++ + + I ++ KYP+ I
Sbjct: 185 VTEVVKLYMEKQIQAGIDVVQIFDSWAAAIEPSKYDEFSWKYMVEIADYLKGKYPHIPII 244
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG L + + G+DWS P++ A E L + +QGN++P RL +
Sbjct: 245 MFPKGIPAFLD--KVYGNFEVFGVDWSTPMALAKEKLGDKYILQGNMEPCRLY-SKEETT 301
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V AI D++G+ IFNLGHGI P V +N + VK +
Sbjct: 302 ACVEAIQDIMGTKRHIFNLGHGILPDVPVENAIHFVKECQ 341
>gi|148655883|ref|YP_001276088.1| uroporphyrinogen decarboxylase [Roseiflexus sp. RS-1]
gi|172048084|sp|A5UU35|DCUP_ROSS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148567993|gb|ABQ90138.1| uroporphyrinogen decarboxylase [Roseiflexus sp. RS-1]
Length = 348
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 125/346 (36%), Positives = 184/346 (53%), Gaps = 9/346 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W MRQAGRY+PEYR IR+++ FL+M TPE E+T+QPIR
Sbjct: 4 SRFLAACRRQPVDATPVWFMRQAGRYMPEYRAIRERYG-FLEMVKTPELAAEITMQPIRA 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAAI+F+DIL + + +G ++ + + EGP + +P+ + D +
Sbjct: 63 FSVDAAIIFADILPLLEGMGLHLTYEQGEGPVIHNPVRSPADVAALRTPDPR-ETVAYTI 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+I ++++ L LIGF GAP+T+A+Y I GG +DH + Y +A+ L++ L
Sbjct: 122 QAIRLVKRDLEGRAPLIGFSGAPFTLAAYAIEGGSSRDHRLTKALMYAEPQAWRELMERL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNAK 241
+ + YLIAQI AG D +QIFD+ AG L ++ +Y V + I AVR P
Sbjct: 182 TAQVSAYLIAQIEAGADAVQIFDSWAGALAPGDYADYVLPFVQKCIIAVRAGCGIVPPPP 241
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQV 300
I F G ML R TD++ IGLDW + L ++ VQGNLDP L+
Sbjct: 242 IIYFGVGLSGML-GLLRQTDADVIGLDWRIHLDDGWAQVGPGVAVQGNLDPHTLLAPWTE 300
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ILD G IFNLGHGI P+ V L + V
Sbjct: 301 VRRRTADILDRAAGRPGHIFNLGHGIVPETPVDTVRRLAEFVHEYS 346
>gi|217072424|gb|ACJ84572.1| unknown [Medicago truncatula]
Length = 389
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 6/347 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQ
Sbjct: 45 NATEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQ 104
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY- 119
P + + D ILFSDIL + V+ +GP DP+ ++ +
Sbjct: 105 PWKVFQPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPV--HSAGQVDQVREFIPEES 162
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +++SILRK++ N ++GF GAP+T+ASY++ GG K + + A+ + +
Sbjct: 163 VPYVGEALSILRKEVDNKSAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKILHS 222
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL + A Y+ Q G +QIFD+ A L +FE ++ + +II V++ +P
Sbjct: 223 LLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFERFSLPYLKQIIDTVKKSHPE 282
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I +A G+G +L+ LT + + LDW+V ++ L +QGN+DP L
Sbjct: 283 LPLILYASGSGGLLERIA-LTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSK 341
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+++ D ++ + G G I NLGHGI +NV + + K
Sbjct: 342 ELITDRIHDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGIK 388
>gi|307637293|gb|ADN79743.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 908]
gi|325995883|gb|ADZ51288.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 2018]
gi|325997478|gb|ADZ49686.1| Uroporphyrinogen III decarboxylase [Helicobacter pylori 2017]
Length = 339
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 122/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCQNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++YP+ I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|302554898|ref|ZP_07307240.1| uroporphyrinogen decarboxylase [Streptomyces viridochromogenes DSM
40736]
gi|302472516|gb|EFL35609.1| uroporphyrinogen decarboxylase [Streptomyces viridochromogenes DSM
40736]
Length = 355
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+R
Sbjct: 17 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIP-MLESCMRPELVTEITLQPVR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+N DAAI FSDI+V A+G ++ GP ++ PI ++E L DL + +
Sbjct: 76 RHNVDAAIYFSDIVVPLKAIGVDLDIKPGVGPVVERPIRSRED--LAQLRDLTPEDVSYV 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++L LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 134 TEAIGLLTREL-GATPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDR 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++A +L QI AG +Q+FD+ AG L ++ + ++ AV I
Sbjct: 193 LAGITAAFLKVQIEAGASAVQLFDSWAGALAPVDYRRSVLPASAKVFDAVAGY--GVPRI 250
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VP+ A + +QGNLDP L + +
Sbjct: 251 HFGVGTGELLPLMGE-AGADVVGVDWRVPMDEAARRVGPGKALQGNLDPTVLFAPTEAVE 309
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+LD +FNLGHG+ P DP + LV+ V +
Sbjct: 310 AKTQEVLDAAADLEGHVFNLGHGVMPATDPDALTRLVEYVHT 351
>gi|327296826|ref|XP_003233107.1| uroporphyrinogen decarboxylase [Trichophyton rubrum CBS 118892]
gi|326464413|gb|EGD89866.1| uroporphyrinogen decarboxylase [Trichophyton rubrum CBS 118892]
Length = 364
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 181/353 (51%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGQTVERPPIWIMRQAGRYLPEYHEAK-GNRDFFECCRSPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V ++ +GP P+ T E + ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLSRTVDVT 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 128 KELDYVYKAITLTRQKLEGRVPLIGFTGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL +S+V E+L Q+ AG +IQ+FD+ AG L F ++ + + + + ++
Sbjct: 188 KNLLQKISEVCVEHLAQQVKAGAQMIQVFDSWAGELSPRSFAEFSLPYLRFVSANLPKRL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L + N +GLDW + A + +QGN DP
Sbjct: 248 QEMGLEAVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDAAKARAVANGRVVLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 307 GCLYGAREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 359
>gi|194014822|ref|ZP_03053439.1| uroporphyrinogen decarboxylase [Bacillus pumilus ATCC 7061]
gi|194013848|gb|EDW23413.1| uroporphyrinogen decarboxylase [Bacillus pumilus ATCC 7061]
Length = 352
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 180/343 (52%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 8 NDTFLKACKGEKTDHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G +V GP +D PI T+ + L +
Sbjct: 67 QYGVDAAILYKDIMTPLPAIGVDVEIKNGIGPVIDSPIRTKADIERLGELHPE-EDLPYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L K+ ++ LIGF GAP+T+ASYMI GG K++ + + Y + L++
Sbjct: 126 LDTIQLLTKE-QLNVPLIGFAGAPFTMASYMIEGGPSKNYHKTKALMYSEPETWMLLMNK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQ+ AGV QIFD+ G L ++ + + RI + ++ + N I
Sbjct: 185 LADMTITYIRAQVKAGVSAFQIFDSWVGALNAADYRTFIKPVMQRIFTELKSE--NVPMI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ GA +++K++ L + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 243 MYGVGASHLVKDWHDLP-LDVVGLDWRMSVDEARKEGLTKTLQGNLDPTILLSPWEVIEE 301
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD + S FIFNLGHG+ P V P + L +
Sbjct: 302 RAKDILDQGMKSDHFIFNLGHGVFPDVSPDTLKKLTDFIHDYS 344
>gi|307150907|ref|YP_003886291.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7822]
gi|306981135|gb|ADN13016.1| uroporphyrinogen decarboxylase [Cyanothece sp. PCC 7822]
Length = 353
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 97/336 (28%), Positives = 174/336 (51%), Gaps = 2/336 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G V++ PP+W+MRQAGRY+ YR +R K+ +F + + +E++LQP +
Sbjct: 10 LLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENADLAIEISLQPWHAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
D I+FSDIL +G +E++GP +DP + + N + + + +
Sbjct: 70 PDGVIMFSDILTPLPGIGIPFDIIESKGPIIDPPIRTQAQIDNLHPFDPEETVPFVKTIL 129
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
LR+++ N T++GF GAPWT+A+Y I G K + + A+ + L L+D+
Sbjct: 130 KTLRQEVGNKSTVLGFVGAPWTLAAYAIEGKGSKTYSIIKSMAFSEPALLHQFLGKLADM 189
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I +
Sbjct: 190 VATYIRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYHQQVVRQVKETHPDTPLILYIS 249
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G+ +L+ + + + + +DW+V ++ A L K+ VQGN+DP L + + +
Sbjct: 250 GSAGVLERMGQ-SGVDLVSVDWTVDMAEARVRLGKDMKVQGNIDPGALFGSQAFIRERIL 308
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G+ I NLGHG+ NV +T +
Sbjct: 309 DTIRKAGNRGHILNLGHGVLVGTPEDNVRFFFETAK 344
>gi|282866540|ref|ZP_06275583.1| uroporphyrinogen decarboxylase [Streptomyces sp. ACTE]
gi|282558587|gb|EFB64146.1| uroporphyrinogen decarboxylase [Streptomyces sp. ACTE]
Length = 356
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L+ + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQ
Sbjct: 15 ATHESAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVTEITLQ 73
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ GP + +P+ T+ L DL +
Sbjct: 74 PVRRHKVDAAIYFSDIVVPLKAIGIDLDIRPGIGPVIAEPVRTRAD--LARLRDLTPEDV 131
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +L +L LIGF GAP+T+ASY++ GG ++H + + Y + + L
Sbjct: 132 SYVTEAIGMLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPELWADL 190
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++++ +L QI AG +Q+FD+ G L ++ + ++ AV
Sbjct: 191 LDRLAEITGAFLEVQIEAGASAVQLFDSWVGALAPADYRRSVLPASAKVFDAVAGY--GV 248
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VPL A + +QGNLDP L
Sbjct: 249 PRIHFGVGTGELLGLMGE-AGADVVGVDWRVPLDEGARRVGPGKALQGNLDPAVLFAPTA 307
Query: 300 VMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +LD IFNLGHG+ P DP + LV+ V +
Sbjct: 308 TVEAKTREVLDAAAGLEGHIFNLGHGVMPTTDPDALTRLVEYVHEQ 353
>gi|237756709|ref|ZP_04585211.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691133|gb|EEP60239.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 348
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 8/348 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + L + + PIWLMRQAGRY+ EYRQ+R+ +F + + V+ ++
Sbjct: 3 NPKNDLFLRACRRQKVERTPIWLMRQAGRYMKEYRQLREIAGSFKNYYKNVDLAVKASIL 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P DA I+FSDIL +++G F E EGP +PI ++E + + +
Sbjct: 63 PYTLLGVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKSKED--IQKLKEFNPEDV 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + I + + I +IGF GAP+T+A+YMI G KD + + F Y N F L
Sbjct: 121 YFVGEIIKGVNQTTGREIPVIGFAGAPFTIAAYMIEGRGSKDFKKTKSFMYNNQEDFKIL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D++ +YL QI +G D +QIFD+ AG L +++ + SV +II ++ + N
Sbjct: 181 LDKIADMTIKYLSFQIESGADAVQIFDSWAGHLSPKDYKEFVLPSVKKIIENLK--HYNK 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQ 299
I F KG + ++++ +DW + + A +L + VQGNLDPM L
Sbjct: 239 PIIHFTKGVCGFMDFILE-SNADVYSIDWMIDIKKAKDLIYPKASVQGNLDPMVLYADTD 297
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ I+ G IFNLGHG+ P +D V LV TV+ +
Sbjct: 298 IIKKEAEYIIKSWGEDTGHIFNLGHGLMPDMDASKVKFLVDTVKEISV 345
>gi|195153651|ref|XP_002017737.1| GL17145 [Drosophila persimilis]
gi|194113533|gb|EDW35576.1| GL17145 [Drosophila persimilis]
Length = 351
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 183/346 (52%), Gaps = 15/346 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 11 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 70 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLK-RLTPDGALSRLTY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L+
Sbjct: 129 VGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFLN 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+D Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 189 LLTDAI-----MQVKAGAQMLQVFESSAEHLTKEDFLIWAVPYLRRIRDELVDRLTKKAV 243
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
P FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 244 PLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMYR 302
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ G +I NLGHGITPQ ++ LV+ V
Sbjct: 303 DADELRALTTEMVHKFGKSRYIANLGHGITPQTPITSMDVLVEAVH 348
>gi|262199055|ref|YP_003270264.1| uroporphyrinogen decarboxylase [Haliangium ochraceum DSM 14365]
gi|262082402|gb|ACY18371.1| uroporphyrinogen decarboxylase [Haliangium ochraceum DSM 14365]
Length = 354
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 123/352 (34%), Positives = 195/352 (55%), Gaps = 14/352 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L + ++ PP+W+MRQAGRYLP+Y+ +R K +FL++C TPE E+TLQ
Sbjct: 6 SSTDHLFLRACRREPVDRPPVWMMRQAGRYLPQYQAVRSKV-SFLELCKTPELACEVTLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE--IYLLNPNIDLFLN 118
PI + FDAAILFSDILV +A+G + F + GP++ P+ + L P+ + +
Sbjct: 65 PIDEFGFDAAILFSDILVPIEAMGMELVFGDG-GPKLPQPLRDRAAIDKLSVPDPEEAMP 123
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++ ++RK+L + LIGFCGAP+T+A+Y I GG K + + + + + +
Sbjct: 124 Y---VTGAVRLIRKELGGRVPLIGFCGAPFTLATYAIEGGGSKSYPHTKSMMFSDPASTH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--- 235
LLD L+ A YL AQ+ AG +QIFD+ AG L +F +A R II +R
Sbjct: 181 ALLDKLAKCCAVYLEAQVAAGAQAVQIFDSWAGILAPRDFREFALRYAKAIIDELRASPT 240
Query: 236 -KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ I F G L++Y ++ +G+DW + L+ A L ++ +QGNLDP
Sbjct: 241 WRDGGVPIIYFVNGCAPYLEDYA-TCGADVLGVDWRIDLAAARAGLGEKVALQGNLDPTC 299
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + + V ++ IFNLGHG+ P +P++V +V TV++
Sbjct: 300 LFLPPEQLRQRVLDVIASHPGPGHIFNLGHGVLPMTNPEHVRVMVDTVKASS 351
>gi|23098622|ref|NP_692088.1| uroporphyrinogen decarboxylase [Oceanobacillus iheyensis HTE831]
gi|29611766|sp|Q8ERY0|DCUP_OCEIH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|22776849|dbj|BAC13123.1| uroporphyrinogen decarboxylase [Oceanobacillus iheyensis HTE831]
Length = 345
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 180/344 (52%), Gaps = 8/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I++ QG + P W MRQAGR PEYR +++K+ + ++ + PE +T P+
Sbjct: 5 KNDTIIKAYQGEETDYTPAWFMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTRLPV 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
Y DAAIL+ DI+ +G +V GP + +PI + + ++ +
Sbjct: 64 ENYGTDAAILYKDIMSPLPYIGVDVEIKSGIGPVIHNPIRNLQDVE-KLGVINPVSDVPY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I +L ++ + LIGF GAP+T+ASYMI GG K++ + + Y+ + L+D
Sbjct: 123 VLDTIRLLTEE-QLEVPLIGFSGAPFTLASYMIEGGPSKNYSKTKALMYREPETWFALMD 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
LSD+ Y+ AQ+ AG IQIFD+ G L ++ + + RI S +RR
Sbjct: 182 KLSDMIISYVDAQVEAGAKAIQIFDSWVGSLNAEDYRVFIKPVMTRIFSELRRH--EVPL 239
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F GA ++L + L + IGLDW ++ A E+ VQGNLDP L+ Q +
Sbjct: 240 ITFGVGARHLLMEWNDLP-VDVIGLDWRTSINEAREMGVTKVVQGNLDPAILLSDWQTIE 298
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD + SG +FNLGHG+TP ++P + L + V +
Sbjct: 299 QRTKQILDQGMQSGKHVFNLGHGVTPDIEPATLKKLTELVHNYS 342
>gi|45200887|ref|NP_986457.1| AGL210Cp [Ashbya gossypii ATCC 10895]
gi|44985657|gb|AAS54281.1| AGL210Cp [Ashbya gossypii ATCC 10895]
Length = 367
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 111/352 (31%), Positives = 182/352 (51%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PP W+MRQAGRYLPEY ++ ++F + C E E+TLQP+
Sbjct: 13 KNDLMLRAARGEDVERPPCWIMRQAGRYLPEYHDVKGG-RDFFETCRDAEIASEITLQPV 71
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
RRY DAAI+FSDILVI A+G V +E +GP +P+ T E + ++ L
Sbjct: 72 RRYAGLLDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRTTEQLMKVLEYEVDVLRE 131
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R+KL + L GFCG PWT+ YM GG + + + ++ +
Sbjct: 132 LDWAFRAITLTRQKLAGDVPLFGFCGGPWTLLVYMTEGGGSRLFRFAKEWIHKRPELAHK 191
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I +AV +
Sbjct: 192 LLQKITDVAIEFLAQQVVAGCQILQVFESWGGELSPADFDEFSLPYLKQIAAAVPARLRE 251
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+ FAKG+ Y L N + LDW + A+ + +QGNLDP
Sbjct: 252 LGITEDVPMTVFAKGSWYALDKLCD-AGYNTVSLDWLWDPAEAVRINNGRVTLQGNLDPT 310
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ + A++ G G +I N GHG P +DP+ + ++
Sbjct: 311 VMYGSDETITKKTEAMIKGFGGGKKQYIVNFGHGTHPFMDPEKIRHFLEECH 362
>gi|222823541|ref|YP_002575115.1| uroporphyrinogen decarboxylase [Campylobacter lari RM2100]
gi|254767689|sp|B9KFM9|DCUP_CAMLR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|222538763|gb|ACM63864.1| uroporphyrinogen decarboxylase [Campylobacter lari RM2100]
Length = 340
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 120/340 (35%), Positives = 191/340 (56%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYLPEY ++R +FL +C + E+TLQP+
Sbjct: 3 FVDACFKKSTPYTPVWMMRQAGRYLPEYMEVRASAGDFLSLCKDYKKASEVTLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G +++F + EGP +PI T+E +++ + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGMDLKFEKGEGPVFSNPIKTKEDLE-RLDVEKSIKNLSYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+++ R+KL + LIGFCG+PWT+A+YMI GG K++ + + YQN + +L L+
Sbjct: 122 LALTREKLAHDKALIGFCGSPWTIATYMIEGGGSKNYAKCKKLVYQNPEFLHQILSKLTL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y+ QI AG + +QIFD+ A L E F ++ + + I ++ KYP+ I F
Sbjct: 182 ALKHYIQEQIKAGANAVQIFDSWASALEEEMFFEFSFKYMLEIADFIKEKYPHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L N + + G+DWS PL A E L + +QGN++P RL + + GV
Sbjct: 242 KGVSGFLDNIN--GNFDVFGVDWSTPLELAKEKLGAKYTLQGNMEPCRLY-DKKAIEVGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL+++ IFNLGHGI P + +N +K V+ +
Sbjct: 299 DKILNIMQDSAHIFNLGHGILPDIPVENAKYFIKLVQEKS 338
>gi|196251138|ref|ZP_03149816.1| uroporphyrinogen decarboxylase [Geobacillus sp. G11MC16]
gi|196209336|gb|EDY04117.1| uroporphyrinogen decarboxylase [Geobacillus sp. G11MC16]
Length = 345
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 9/347 (2%)
Query: 1 MNER-KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M R L +G P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MTRRINDTFLRACRGEKTAYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ A+G +V GP + +PI + ID +
Sbjct: 60 RLPVEQYGVDAAILYKDIMTPLPAIGVDVEIRGGVGPVIANPIRSLHDVERLGEIDPEHD 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+
Sbjct: 120 -VPYVLETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R +
Sbjct: 178 ALMDKLAEMTIRYVKAQIQAGASTVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE-- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
A I F GA ++ + L + IGLDW + + A +QGNLDP L+
Sbjct: 236 GAPLIMFGVGASHLAHEWNDLP-LDVIGLDWRLSIREARRRGITKAIQGNLDPAVLLAPW 294
Query: 299 QVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + V ILD + +IFNLGHGI P V P + L +
Sbjct: 295 DVIEERVKRILDEGMEQPGYIFNLGHGIFPDVQPATLKRLTAFIHDY 341
>gi|303272001|ref|XP_003055362.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226463336|gb|EEH60614.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 410
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 100/346 (28%), Positives = 182/346 (52%), Gaps = 4/346 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L ++G + PPIW+MRQAGRY+ Y+++ KK F + + VE++LQ
Sbjct: 66 ATKDPLMLRAIRGEDVERPPIWMMRQAGRYMKIYQELCKKHPTFRERSEKVDLAVEISLQ 125
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + D ILFSDIL + V+ GP + DP+ + ++ + +
Sbjct: 126 PWEAFQPDGVILFSDILTPLSGMNIPFDIVKGTGPVIMDPVRGMDDVKKITKLEPEKS-V 184
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ +LR+++ N+ T++GF GAP+T+ASY++ GG + + A+ + + L
Sbjct: 185 PFVGEALGLLRQEVGNNATVLGFVGAPFTLASYIVEGGTSTHYKVIKKMAFDEPQIYEAL 244
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ ++D EY+ Q +G VIQIFD+ A +F+ Y + RI++ V+ +P+
Sbjct: 245 LNSITDSVVEYVKYQADSGAQVIQIFDSWASEFCPSDFDKYCLPYLTRIVTEVKATHPDV 304
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I ++ G+G +L+ + T ++ I LD +V ++ A L + VQGN+DP+ L
Sbjct: 305 PLILYSSGSGGLLERL-KTTGADVISLDGTVDMADARARLGMDQAVQGNMDPVSLFGSKA 363
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V + G+ + NLGHG+ +NV +TV+ +
Sbjct: 364 HITERVLDTIKKAGNTKHVMNLGHGVMQGTPEENVAHFFQTVKDYR 409
>gi|83944960|ref|ZP_00957326.1| uroporphyrinogen decarboxylase [Oceanicaulis alexandrii HTCC2633]
gi|83851742|gb|EAP89597.1| uroporphyrinogen decarboxylase [Oceanicaulis alexandrii HTCC2633]
Length = 345
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 138/346 (39%), Positives = 201/346 (58%), Gaps = 3/346 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ Q L L G ++PPPIWLMRQAGRYLPEYR++R + +F++ C + E+TL
Sbjct: 1 MTDQNQPFLRALAGETVSPPPIWLMRQAGRYLPEYREVRAQQPDFINFCLNSDAAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDA+I+F+DIL+I LG+ V F + EGP+++P+ + + L +++ L
Sbjct: 61 QPIRRYGFDASIVFADILLIPYGLGQKVWFEKGEGPKLEPLALENLGAL--SVERANEVL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +I +R LP +LIGF G+PWTVA+YMI GG KD R A+ AF+ L
Sbjct: 119 RPVSDTIRKVRAGLPETCSLIGFAGSPWTVATYMIEGGGSKDRINARTLAWSQPDAFDTL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++ SA+YL AQ AG + +++FD+ A L + F+ R RII +R+
Sbjct: 179 LDLLAEASAQYLKAQADAGANALKLFDSWAEGLPDPLFDRVIIRPTKRIIDRLRQMGVTL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAG Y + T + LD + +A K+ P+QG LDP L G
Sbjct: 239 PVIGFPRGAGPQAVRYAKETGIQCLALDHGLDTDWARGAFPKDLPLQGQLDPAVLRAGGD 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++ +L P++FNLGHGI P+NV L++ VR K
Sbjct: 299 VLDSEIDRLLSAWAGRPYVFNLGHGIHLDTPPENVTRLIERVRGFK 344
>gi|315638245|ref|ZP_07893427.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis JV21]
gi|315481781|gb|EFU72403.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis JV21]
Length = 340
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 117/341 (34%), Positives = 184/341 (53%), Gaps = 6/341 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYL EY +RK +FL +C + E++LQP+
Sbjct: 3 FIDACFKRQTPYTPVWMMRQAGRYLSEYMAVRKSAGDFLSLCKDYQKASEVSLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G +RF + EGP +P+ +E ++ + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGLELRFEKGEGPVFENPLQNKEDLDKLDDLS-AVKKLHYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S+ R+KL LIGFCG+ WT+A+YMI G K++ + + YQN + +L L++
Sbjct: 122 LSLTREKLAKDKALIGFCGSAWTIATYMIEGRGSKNYAKCKKMLYQNPELLHQILRKLNE 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + +QIFD+ AG L + F ++ + + S +++KYP+ I F
Sbjct: 182 VLKLYLEEQIRAGANAVQIFDSWAGALEKEAFFEFSFSYMCELSSYLKQKYPHIPVIVFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + GV
Sbjct: 242 KGVSGFLDKI--EGEFDVFGVDWSTPLDLARDKLSHKFTLQGNMEPCRLY-DKNAIKKGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
IL ++ IFNLGHGI P + +N +K V+ +
Sbjct: 299 EQILQIMQDKSHIFNLGHGILPDIPVENAKYFIKLVQESSV 339
>gi|318041195|ref|ZP_07973151.1| uroporphyrinogen decarboxylase [Synechococcus sp. CB0101]
Length = 352
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 103/346 (29%), Positives = 180/346 (52%), Gaps = 6/346 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++
Sbjct: 1 MTETAPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSENPDLSFEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLN 118
QP + D ILFSDIL +G N VE++GP + DPI + ++ L P
Sbjct: 61 QPFEAFKPDGVILFSDILTPLPGMGINFDIVESKGPLIHDPIRSMAQVEALRPL--NPAE 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + ++ LR + N ++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 SMPFVGEVLTRLRSAVGNQAAVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPELLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLDHFAESIAAYLRYQIDSGAQVVQMFDSWAGQLSPADYDTFAAPYQKKVVDLVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVG 297
+ FI + G+ +++ R T + + LDW+V ++ L + VQGN+DP L
Sbjct: 239 DTPFILYISGSAGVIERMAR-TGVDIVSLDWTVDMAEGLARLPEHVGVQGNVDPGLLFGS 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + I NLGHGI P +N + +S
Sbjct: 298 KEAIQARIDDTVRKARGRKHILNLGHGILPGTPEENGQFFFEAGKS 343
>gi|294013515|ref|YP_003546975.1| uroporphyrinogen decarboxylase [Sphingobium japonicum UT26S]
gi|292676845|dbj|BAI98363.1| uroporphyrinogen decarboxylase [Sphingobium japonicum UT26S]
Length = 353
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 134/340 (39%), Positives = 203/340 (59%), Gaps = 6/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL+G + PP+WLMRQAGRYLPEYR +R + FL++ Y E+TLQP+RR
Sbjct: 15 KPLLSVLKGALPAVPPMWLMRQAGRYLPEYRALRAEKGGFLELVYDSAAAAEVTLQPLRR 74
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNYLLPIF 124
+ FD AILFSDIL++ A+G+++ F EGPR+ PI ++ L P+ + ++
Sbjct: 75 FGFDGAILFSDILIVPYAMGQDLWFEAGEGPRLAPILAETDLSTLKPD----FSRYEAVY 130
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++ L +T +GF G+PWT+A+YM++G KD G R AY+ F ++D +
Sbjct: 131 ETVRQVKAALDPQVTFLGFAGSPWTIATYMVAGQGSKDQGAARRMAYRQPDKFGAIIDAI 190
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + YL QI AGV+ +Q+FD+ AG L EFE + R RI+ ++ +P+ I
Sbjct: 191 IDATVVYLCGQIEAGVEAVQLFDSWAGSLAPLEFERWVIRPNRRIVEKLKAIHPDIPVIG 250
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMID 303
F KGAG L +Y T +A+G+D +V +A + +G PVQGNLDP+ L+ G + + +
Sbjct: 251 FPKGAGAKLADYAVGTGVDAVGVDETVDPHWANRVLPQGLPVQGNLDPLALIAGGRAVEE 310
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ I P IFNLGHGI P +V L+ VR+
Sbjct: 311 AVDNIRAAFAGRPHIFNLGHGILPDTPIDHVEALLSYVRA 350
>gi|327438770|dbj|BAK15135.1| uroporphyrinogen-III decarboxylase [Solibacillus silvestris
StLB046]
Length = 350
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 109/347 (31%), Positives = 177/347 (51%), Gaps = 7/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + P+W MRQAGR PEYR+I++K+ + ++ PE +T
Sbjct: 1 MMKFNDTLLRAARGEQVEHTPVWFMRQAGRSQPEYREIKEKY-SLEEITMQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
P+ +YN DAAIL+ DI+ +G +V+ GP + + + N +
Sbjct: 60 LPVEQYNVDAAILYKDIVTPLPGMGIDVKIKAGIGPVISNPIRSAVDVENLREFNAQEHT 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F +A+ L
Sbjct: 120 PYVLETIKMLTTE-QLNVPLIGFGGAPFTLASYMIEGGPSKNYAKTKSFMVSQPKAWFAL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L+D+ + AQ+ AG IQIFD+ G L ++ + ++ RI + +R N
Sbjct: 179 MEKLADMIIVDITAQVEAGAKAIQIFDSWVGALNVEDYRIFIKPTMTRIFAELRAL--NV 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW +P+ A VQGNLDP L+ V
Sbjct: 237 PLIQFGVGASHLINEWHDLP-VDVVGLDWRLPIREAEARGVTKAVQGNLDPTLLLADWNV 295
Query: 301 MIDGVNAILDV--LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I+D +G IFNLGHG+ P+VDP + L V
Sbjct: 296 IEARAKDIVDQGLAHTGGHIFNLGHGVFPEVDPAVLKRLTTFVHEYS 342
>gi|288555326|ref|YP_003427261.1| uroporphyrinogen decarboxylase [Bacillus pseudofirmus OF4]
gi|288546486|gb|ADC50369.1| uroporphyrinogen decarboxylase [Bacillus pseudofirmus OF4]
Length = 347
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 121/347 (34%), Positives = 189/347 (54%), Gaps = 17/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 7 NDTFLKACRGEAHDHVPVWYMRQAGRSQPEYRKIKEKY-SLFEITHQPELCAYVTKLPVD 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL----LNPNIDLFLNY 119
+YN DAAIL+ DI+ A+G +V GP +D PI ++ +NP D
Sbjct: 66 QYNNDAAILYKDIMTPLPAIGVDVEIKSGIGPVIDNPIRSKGDVEKLGMINPEED----- 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +LR++L + LI F GAP+T+ASYMI GG K++ + + F Y A++
Sbjct: 121 VPYVLDTIKLLREQL--TVPLISFGGAPFTLASYMIEGGPSKNYNKTKAFMYAEPEAWHM 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L DV+ Y+ +QI AG IQIFD+ G L ++ + + RI + +R++ N
Sbjct: 179 LMDKLGDVTITYVKSQIAAGAQAIQIFDSWVGALNVADYRAFVKPVMNRIFTELRKE--N 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ + L + +GLDW + ++ A E + VQGNLDP L+
Sbjct: 237 VPLIMFGVGASHLANEWNDLP-LDVVGLDWRLSVNEARERGIQKTVQGNLDPAILLAPWN 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + AILD + S FIFNLGHG+ P+V+P + L V
Sbjct: 296 VIEERAKAILDQGMQSDNFIFNLGHGVFPEVNPDTLRRLTAFVHEYS 342
>gi|242041001|ref|XP_002467895.1| hypothetical protein SORBIDRAFT_01g036030 [Sorghum bicolor]
gi|241921749|gb|EER94893.1| hypothetical protein SORBIDRAFT_01g036030 [Sorghum bicolor]
Length = 394
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 95/344 (27%), Positives = 174/344 (50%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++ ++G ++ PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQ
Sbjct: 50 TAEEPLLVSAIRGRKVDRPPVWLMRQAGRYMKSYQSLCERYPSFRERSENVDLVVEISLQ 109
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP + DP+ T + ++
Sbjct: 110 PWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREF-VPEEWV 168
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q++++LR+++ N ++GF GAP+T+ASY + GG K+ + A+ + L
Sbjct: 169 PYVGQALNLLREEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTMIKKMAFSEPAILHNL 228
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + + Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +PN
Sbjct: 229 LQKFTTSMSNYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVKETHPNL 288
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L VQGN+DP L +
Sbjct: 289 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKE 347
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + G+ + NLGHGI +NV + +
Sbjct: 348 FISKRIYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKG 391
>gi|256270819|gb|EEU05966.1| Hem12p [Saccharomyces cerevisiae JAY291]
Length = 362
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVK-NNRDFFQTCRDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
RRY DAAI+FSDILVI A+G V +E +GP +P+ E + + L
Sbjct: 67 RRYRGLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKE 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L GFCG PWT+ YM GG + + + +
Sbjct: 127 LDWAFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHK 186
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 187 LLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQE 246
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPM 292
I FAKG+ Y L + + + LDWS A+++ K +QGNLDP
Sbjct: 247 LGIIEQIPMIVFAKGSWYALDKLC-CSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +V+ V +++ G G +I N GHG P +DP + ++
Sbjct: 306 VMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDPDVIKFFLEECH 357
>gi|307211421|gb|EFN87548.1| Uroporphyrinogen decarboxylase [Harpegnathos saltator]
Length = 356
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 188/350 (53%), Gaps = 14/350 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE++++R + +F +C T ++TLQPI
Sbjct: 10 KNDRILRAARGEPVDRVPVWVMRQAGRYLPEFQEVRAR-HDFFTVCQTSALASQVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPI--TTQEIYLLNPNIDLFLNYL 120
R++ DA+I+FSDILVI A+G V V GP + P+ + L+ PN++ L Y
Sbjct: 69 LRFDLDASIIFSDILVIPQAMGLKVEMVAGIGPVLPQPLINPSDLARLVRPNVEEALKY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GAPWT+ YMI GG + R + Y+ + L
Sbjct: 128 --VGDAITLTRHKLDGKVPLIGFSGAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDSHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++DV +YLI Q+ AG ++Q+F+++ L + F NY+ + + +I VR +
Sbjct: 186 LQMITDVIVDYLIMQVKAGAQLLQVFESNGDYLDDTLFTNYSFKYLKQISKRVREQLKKE 245
Query: 238 --PNAKFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
P I F KGA L+ + IGLDW++ + A + L +QGN+DP
Sbjct: 246 NIPEVPMIVFPKGATMKSLEILAKDQSYEVIGLDWTIDPAEARKCLGPNVTLQGNMDPCA 305
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++D ++ G +I NLGHGI P ++ +K V +
Sbjct: 306 MYSSQDEIVDRAQKMVVKFGKDRYIANLGHGILPDTPIPSMQAFIKGVHT 355
>gi|159487233|ref|XP_001701638.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
gi|158280857|gb|EDP06613.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
Length = 394
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 5/338 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ +G + P W+MRQAGRY YR++ KK +F + T E VE++LQP
Sbjct: 48 EPLMVRAARGEKVERAPCWMMRQAGRYQKSYRELAKKHPSFRERSETTELIVEISLQPWN 107
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL +G N +N+GP +D PI T E +D + + +
Sbjct: 108 SFKPDGVILFSDILTPLPGIGVNFDIDDNKGPIIDTPIRTLEQVKQLHAMD--FSKVDFV 165
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ LR ++ N ++GF G+PWT+A+Y+I GG + + + + LL
Sbjct: 166 GRALTQLRSEVNNQAAVLGFVGSPWTLATYLIEGGSTSLYKTIKTMCFSAPEVLDALLSK 225
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D AEY+ QI AG +QIFD+ G L E+E ++ + RII++V+ +YP
Sbjct: 226 LADAMAEYIKYQIRAGAQCVQIFDSWGGQLPPREWEKWSGPYLKRIIASVKAEYPTVPLT 285
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ T ++ IG+DW+ ++ A VQGN+DP L + +
Sbjct: 286 LYANGSGGLLERLA-TTGADVIGVDWTTDMADARRRIPSTQSVQGNVDPAILFASHDAIE 344
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
D V L G I NLGHG+ + V +
Sbjct: 345 DAVRDCLRKGGGQRHILNLGHGVLVGTPEEGVAHMFDL 382
>gi|86605095|ref|YP_473858.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-3-3Ab]
gi|123507755|sp|Q2JX97|DCUP_SYNJA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86553637|gb|ABC98595.1| uroporphyrinogen decarboxylase [Synechococcus sp. JA-3-3Ab]
Length = 362
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 110/337 (32%), Positives = 173/337 (51%), Gaps = 2/337 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++L +G V++ PP+W+MRQAGRY+ YR+++ K+ F C PE +E++LQP R
Sbjct: 19 DRLLRAARGEVVDRPPVWMMRQAGRYMAAYRELQSKY-TFKQRCEIPELAIEISLQPFRA 77
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ D I+FSDIL + +G VE +GP +DP + + + L I
Sbjct: 78 FAPDGVIMFSDILTPLEGMGIPFELVEQQGPIIDPPIRSQAQVEQIRLLEPEESLPFIKT 137
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+S LR+++ TL+GF G+PWT+A Y + G KD+ + A+ + + LL L+
Sbjct: 138 ILSTLRREVEGKATLLGFVGSPWTLACYAVEGRSSKDYAHIKSLAFTQPQVLHQLLSKLA 197
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D A Y+I QI G V+Q+FDT AG L ++E +A +I+ V+ + P I +
Sbjct: 198 DSIARYVIYQIECGAQVVQLFDTWAGQLSPGDYETWALPYQKQIVDQVKARCPQVPLILY 257
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G+ +L+ + + LDW ++ A VQGNLDPM L+ + +
Sbjct: 258 INGSAALLERVGK-AGIDVFSLDWMSDMAEARARLGSLAVQGNLDPMVLLGSPKFIRQRT 316
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
++ GS I NLGHG+ NV +TVR
Sbjct: 317 LEVIQKAGSRGHIMNLGHGVHHTTPEANVHHFFETVR 353
>gi|318061062|ref|ZP_07979783.1| uroporphyrinogen decarboxylase [Streptomyces sp. SA3_actG]
gi|318079174|ref|ZP_07986506.1| uroporphyrinogen decarboxylase [Streptomyces sp. SA3_actF]
Length = 343
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 12/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M R L+ + + P+W MRQAGR LPEY + R+ L+ C PE E+T+
Sbjct: 1 MTPRDSVFLKACRREPVPYTPVWFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITM 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLN 118
QP+RR+ DAA+ FSDI+V A+G ++ GP + DP+ ++ L P ++
Sbjct: 60 QPVRRHKVDAAVYFSDIVVPLKAIGIDLDIKPGIGPVVADPVRGAADLARLRPLQPEDVS 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + ++I +L +L LIGF GAP+T+ASY++ GG ++H + + Y +
Sbjct: 120 Y---VTEAIGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWA 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D++ +L QI AG +Q+FD+ G L ++ Y + ++ +AV
Sbjct: 176 QLLDRLADITTGFLKVQIEAGASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY-- 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVG 297
I F G G +L + ++ +G+DW VPL A + +QGNLDP L
Sbjct: 234 GVPRIHFGVGTGELLHDLGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAD 292
Query: 298 NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +LD IFNLGHG+ P DP + DLV V
Sbjct: 293 EAAIREKTTEVLDAARDLEGHIFNLGHGVLPTTDPGVLTDLVADVHERS 341
>gi|46108958|ref|XP_381537.1| hypothetical protein FG01361.1 [Gibberella zeae PH-1]
Length = 366
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 116/355 (32%), Positives = 188/355 (52%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G + PP+W+MRQAGRYLPEY + + ++F + C PE E+TLQP+
Sbjct: 9 KNDLLLRTAWGQTVERPPMWVMRQAGRYLPEYHEAK-GNRDFFECCRDPEVATEITLQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RR+ DAAI+FSDILVI A+G V V+ +GP +P+ + + +L ++D+
Sbjct: 68 RRFAGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLKSPDDGQYGQVLAKDVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L ++ +I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 128 VE-LGYVYDAITLTRQKLDGQVPLIGFCGAPWTLFCYMVEGGGTKLFAQVKTWIYKYPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++D+ E+L Q+ AG ++ +FD+ AG LG + ++ + +I + K
Sbjct: 187 AKKLLSKIADICVEHLALQVKAGAQLVMVFDSWAGELGPASYRQFSEPYLKQIAEKLPAK 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNL 289
F KGA Y L + L N +G+DW A++++ + QGN
Sbjct: 247 IQSLGLEKVPMTVFPKGAWYALDSACNL-GYNVVGMDWLHDPKEAVKIRGDRNIVFQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L + + V +++ G +I NLGHGITP V+P ++ + +
Sbjct: 306 DPGVLYGTKEAITKAVEEMVEGFWVGDKGWIANLGHGITPGVNPDHLKHYFEEIH 360
>gi|323489412|ref|ZP_08094641.1| uroporphyrinogen decarboxylase [Planococcus donghaensis MPA1U2]
gi|323396906|gb|EGA89723.1| uroporphyrinogen decarboxylase [Planococcus donghaensis MPA1U2]
Length = 348
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 178/343 (51%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G + P+W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 4 NDTYLRAARGEKTDHVPVWYMRQAGRSQPEYRKIKEKY-SLEEITHQPELCAYVTKLPVD 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V+ GP + +PI T I+ + +
Sbjct: 63 QYNNDAAILYKDIVTPLPAIGVDVKIKSGIGPVIDNPIRTMADIERLGEINPE-QDVDFV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ ++ LIGF GAP+T+ASYMI GG K + + + + L+D
Sbjct: 122 LDTIRLLTQE-QLNVPLIGFSGAPFTLASYMIEGGPSKSYNKTKAMMVSEPAMWFALMDK 180
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D Y+ AQI AG IQIFD+ G L ++ + + RI + +R + N
Sbjct: 181 LADTIIPYVKAQIKAGAKAIQIFDSWVGALNVEDYRIFIKPVMDRIFAELRTE--NVPLT 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW +P+S A + +QGNLDP L+ V+ +
Sbjct: 239 IFGVGASHLAKEWHELP-VDVVGLDWRLPISEARSMGLTKTLQGNLDPSYLLADWSVIEE 297
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD + + +IFNLGHG+ P+V+P + L V
Sbjct: 298 RTKKILDMGMQNDGYIFNLGHGVFPEVNPDTLKRLTSFVHEYS 340
>gi|307211525|gb|EFN87613.1| Transcription termination factor rho [Harpegnathos saltator]
Length = 743
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 168/320 (52%), Positives = 223/320 (69%), Gaps = 2/320 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR+IR+ +FLD+CYTP E+TLQPIRR+ FDAAILFSDILVI AL
Sbjct: 1 MRQAGRYLPEYRKIRQIAGSFLDLCYTPALAAEVTLQPIRRFGFDAAILFSDILVIPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
GR++ F E GP++ P+T +I L N + L P++++IS++++ + LIGFC
Sbjct: 61 GRDLHFEEGRGPQLTPVTVHDISKLTDN--GAVERLAPVYETISLVKQDIDEKTALIGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D R+F Y+N +A LL+ L+DVSA++LIAQI AG + +Q
Sbjct: 119 GAPWTVATYMIAGHGTSDQAPARLFGYENPQAMQDLLNCLADVSADHLIAQIEAGAEAVQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFD+ AG L E FE + V R++ VRR++ + I F +GAG + +Y + T A
Sbjct: 179 IFDSWAGVLDETSFEAFCVAPVRRMVERVRRRHADTPIIGFPRGAGVLYTDYAQKTGVTA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
+GLDWSVPLSFA +LQ+ PVQGNLDP+RLV G + + +GV+ IL LGS PFIFNLGHG
Sbjct: 239 LGLDWSVPLSFAQKLQETVPVQGNLDPVRLVAGGKALDEGVDMILQALGSKPFIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVRSE 344
ITPQ +V +VK VR +
Sbjct: 299 ITPQTPIAHVEQMVKRVRGQ 318
>gi|296811594|ref|XP_002846135.1| uroporphyrinogen decarboxylase [Arthroderma otae CBS 113480]
gi|238843523|gb|EEQ33185.1| uroporphyrinogen decarboxylase [Arthroderma otae CBS 113480]
Length = 364
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 184/353 (52%), Gaps = 16/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRTARGESVERPPIWIMRQAGRYLPEYHEAK-GNRDFFECCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V ++ +GP P+ T E ++ ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVVNRSVDVT 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ + A
Sbjct: 128 KELDYVYKAITLTRQKLNGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYADAS 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL +S+V E+L Q+ AG ++Q+FD+ AG L F ++A + I + + ++
Sbjct: 188 KKLLQKISEVCVEHLAQQVKAGAQMVQVFDSWAGELSPRAFADFALPYLRYISTNLPKRL 247
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L + + +GLDW + A + +QGN DP
Sbjct: 248 REMGLDVVPMTVFAKGAWYALDELCE-SGYDVVGLDWQHDAAKARAVANGRVVLQGNADP 306
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 307 GCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 359
>gi|163848148|ref|YP_001636192.1| uroporphyrinogen decarboxylase [Chloroflexus aurantiacus J-10-fl]
gi|222526049|ref|YP_002570520.1| uroporphyrinogen decarboxylase [Chloroflexus sp. Y-400-fl]
gi|189083001|sp|A9WIS6|DCUP_CHLAA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767691|sp|B9LKR9|DCUP_CHLSY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163669437|gb|ABY35803.1| uroporphyrinogen decarboxylase [Chloroflexus aurantiacus J-10-fl]
gi|222449928|gb|ACM54194.1| uroporphyrinogen decarboxylase [Chloroflexus sp. Y-400-fl]
Length = 355
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 192/347 (55%), Gaps = 9/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ PIWLMRQAGRY+PEYR IR+++ FL M TPE E+TLQP++
Sbjct: 2 RDRFLRACRRQPVDRTPIWLMRQAGRYMPEYRAIRERYG-FLQMVKTPEVAAEVTLQPVQ 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAI+F+DIL + LG + + + EGP + +PI + + + D +
Sbjct: 61 AFGVDAAIIFADILPPLEGLGLQLTYEKGEGPVIHNPIRSPHDVSVLRSCDPR-ETVAYT 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +++++L + LIGF GAP+T+ASY I GG +++ + F Y+ A++ L++
Sbjct: 120 LAALQLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSREYRLTKRFMYEQPAAWHDLMER 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA--K 241
LS + A+YLIAQI AG D +QIFD+ AG L ++ Y R ++ +R + +
Sbjct: 179 LSRLVADYLIAQIEAGADAVQIFDSWAGALSPADYRAYVLRHTQALVQTIRARLGDVTPP 238
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F + R++ ++ +G+DW + L A + VQGNLDPM L +
Sbjct: 239 IIYFGTDMAGLAGEVRQI-GADVLGVDWRIDLDVAWAQYGFNHAVQGNLDPMTLFAPPSI 297
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ IL+ G P IFNLGHGI + +V LV+ V+S +
Sbjct: 298 IAARARDILERAGGRPGHIFNLGHGILTETPVDHVRYLVEFVQSYPL 344
>gi|6320252|ref|NP_010332.1| Hem12p [Saccharomyces cerevisiae S288c]
gi|416894|sp|P32347|DCUP_YEAST RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3767|emb|CAA45253.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae]
gi|4776|emb|CAA79514.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae]
gi|798900|emb|CAA89078.1| Hem12p [Saccharomyces cerevisiae]
gi|190404982|gb|EDV08249.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae RM11-1a]
gi|207346807|gb|EDZ73194.1| YDR047Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259145291|emb|CAY78555.1| Hem12p [Saccharomyces cerevisiae EC1118]
gi|285811071|tpg|DAA11895.1| TPA: Hem12p [Saccharomyces cerevisiae S288c]
gi|323349330|gb|EGA83555.1| Hem12p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355740|gb|EGA87555.1| Hem12p [Saccharomyces cerevisiae VL3]
Length = 362
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVK-NNRDFFQTCRDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
RRY DAAI+FSDILVI A+G V +E +GP +P+ E + + L
Sbjct: 67 RRYRGLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKE 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L GFCG PWT+ YM GG + + + +
Sbjct: 127 LDWAFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHK 186
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 187 LLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQE 246
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPM 292
I FAKG+ Y L + + + LDWS A+++ K +QGNLDP
Sbjct: 247 LGIMEQIPMIVFAKGSWYALDKLC-CSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +V+ V +++ G G +I N GHG P +DP + ++
Sbjct: 306 VMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDPDVIKFFLEECH 357
>gi|320583670|gb|EFW97883.1| Uroporphyrinogen decarboxylase [Pichia angusta DL-1]
Length = 389
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 111/351 (31%), Positives = 177/351 (50%), Gaps = 14/351 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP+WLMRQAGRYLPEY +++ ++F + C PE +T+QPI
Sbjct: 36 KNDLILRAARGEAVERPPVWLMRQAGRYLPEYHEVK-GNRDFFETCRDPEIASAITIQPI 94
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G +V+ V+ GPR DP+ E L
Sbjct: 95 DHFDGLIDAAIIFSDILVIPQAMGMDVQMVDKVGPRFTDPLRVPEDLNRLHKNTDVAKEL 154
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F SI+ R KL + L+GFCGAPWT+ YMI GG K + + + ++ A + L
Sbjct: 155 HWAFTSITTTRIKLQGRVPLLGFCGAPWTLMCYMIEGGGSKIYRFVKEWLFKYPEASHKL 214
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L ++DV+ E+L Q+ AG ++Q+F++ G L +F ++ + +I + +
Sbjct: 215 LQMITDVAVEFLALQVKAGAQMLQVFESWGGELSPADFREFSLPYLRQISQKLPLRLKEL 274
Query: 240 -----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
FAKG+ Y L + + + LDW A++ + +QGNLDP
Sbjct: 275 GITEKIPLTVFAKGSFYALDELCE-SGYDVVSLDWLYEPEEAVKVVNGRVALQGNLDPCV 333
Query: 294 LVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + ++ G G +I N GHG P +DP+ + ++
Sbjct: 334 MYGSRETIRRKTEEMIKGFGGGKKNYIINFGHGTHPFMDPEQIRFFLEECH 384
>gi|151942038|gb|EDN60394.1| uroporphyrinogen decarboxylase [Saccharomyces cerevisiae YJM789]
Length = 362
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 179/352 (50%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVK-NNRDFFQTCRDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
RRY DAAI+FSDILVI A+G V +E +GP +P+ E + + L
Sbjct: 67 RRYRGLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKE 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L GFCG PWT+ YM GG + + + +
Sbjct: 127 LDWAFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHK 186
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 187 LLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQE 246
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPM 292
I FAKG+ Y L + + + LDWS A+++ K +QGNLDP
Sbjct: 247 LGIMEQIPMIVFAKGSWYALDKLC-CSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +V+ V +++ G G +I N GHG P +DP + ++
Sbjct: 306 VMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDPDVIKFFLEECH 357
>gi|261418905|ref|YP_003252587.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC61]
gi|319765722|ref|YP_004131223.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC52]
gi|261375362|gb|ACX78105.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC61]
gi|317110588|gb|ADU93080.1| uroporphyrinogen decarboxylase [Geobacillus sp. Y412MC52]
Length = 345
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 112/342 (32%), Positives = 182/342 (53%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G + P+W MRQAGR PEYR +++K+ + ++ + PE +T P+
Sbjct: 6 NDTFLRACRGEQTSYVPVWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTRLPVE 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G +V GP + +PI + + ID + + +
Sbjct: 65 QYGVDAAILYKDIMTPLPAIGVDVEIQGGVGPVIANPICSLQDVERLGEIDPEHD-VPYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I +L + + LIGF GAP+T+ASYMI GG K++ + + F Y +A+ L+D
Sbjct: 124 FETIRLLVNE-QLDVPLIGFAGAPFTLASYMIEGGPSKNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y+ AQI AG +QIFD+ G + ++ + ++ RI +A+R + A I
Sbjct: 183 LAEMTIRYVRAQIRAGASAVQIFDSWVGAVNADDYRTFIKPAMARIFAALREE--GAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA +++ + L + IGLDW + + A +QGNLDP L+ V+ +
Sbjct: 241 MFGVGASHLVHEWNDLP-LDVIGLDWRLSIREARRQGIAKAIQGNLDPAVLLAPWDVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V ILD + +IFNLGHGI P V P + L +
Sbjct: 300 RVKRILDEGMERPGYIFNLGHGIFPDVQPATLKRLTAFIHEY 341
>gi|208434525|ref|YP_002266191.1| uroporphyrinogen decarboxylase [Helicobacter pylori G27]
gi|238058039|sp|B5Z6X6|DCUP_HELPG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|208432454|gb|ACI27325.1| uroporphyrinogen decarboxylase [Helicobacter pylori G27]
Length = 339
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 122/339 (35%), Positives = 187/339 (55%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEILKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++YP+ I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ETILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|33861140|ref|NP_892701.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|45476858|sp|Q7V2A0|DCUP_PROMP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|33639872|emb|CAE19042.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 346
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 105/348 (30%), Positives = 182/348 (52%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGENLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI + +
Sbjct: 61 QPFLAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNIRQVEKLKEL-IPNES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LSFVGEVLSSLKKDVKNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ ++P+
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKEEFPD 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGN 298
I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L
Sbjct: 240 TPIILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPTGIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + ++ + + +I NLGHGI P +N + +K+
Sbjct: 299 DSIKERIDNTFNKVKERKYILNLGHGILPGTPEENAKTFFE--HGKKL 344
>gi|298293761|ref|YP_003695700.1| uroporphyrinogen decarboxylase [Starkeya novella DSM 506]
gi|296930272|gb|ADH91081.1| uroporphyrinogen decarboxylase [Starkeya novella DSM 506]
Length = 350
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 147/351 (41%), Positives = 206/351 (58%), Gaps = 8/351 (2%)
Query: 1 MNERKQK-----ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E K +L+ L G+V PIW+MRQAGRYLPEYR++R+K +FL +CYTPE+
Sbjct: 1 MKEPGDKAGSSILLQALDGHVPKRTPIWMMRQAGRYLPEYREVREKAGDFLTLCYTPEHA 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE+TLQPIRR+ FDAAILFSDILV+ ALG + F EGPR+ P+T + + DL
Sbjct: 61 VEVTLQPIRRFGFDAAILFSDILVVPHALGCPLTFEAGEGPRLQPVTDADDLKALRD-DL 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + +++S +R +LP L+GFCGAPWTVA+YM++G D R+ A N
Sbjct: 120 DPSKIDRVLETVSRVRAELPGETALLGFCGAPWTVATYMVAGRGTPDQAPARLAALINPD 179
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
F L+D L + S YL+ Q+ AG D +QIFDT +G L F ++ + + RI+ VR
Sbjct: 180 FFEALIDRLVEASVGYLVGQLRAGADAVQIFDTWSGVLDPESFRRWSIQPIKRIVDGVRA 239
Query: 236 KYPNAKFISFAKGAG-YMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMR 293
+ P A+ I+F KGA L T N +GLDW+ L +QGNLDP+
Sbjct: 240 QVPGARIIAFPKGATLAGLTELVLRTGVNGVGLDWTAERRATRLALGGRCALQGNLDPLA 299
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L+ G + G++A+++ IFNLGHGI P+ +V +V VR
Sbjct: 300 LIAGGDALDRGIDALMEDFHGAAHIFNLGHGIRPETPITHVERMVAKVRGF 350
>gi|295702762|ref|YP_003595837.1| uroporphyrinogen decarboxylase [Bacillus megaterium DSM 319]
gi|294800421|gb|ADF37487.1| uroporphyrinogen decarboxylase [Bacillus megaterium DSM 319]
Length = 347
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 115/343 (33%), Positives = 182/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P+
Sbjct: 7 NDTFLKACRGEKTDHVPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPELGAYVTRLPVE 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ ++G +V GP + +PI + I + +
Sbjct: 66 QYGVDAAILYKDIMSPLPSIGVDVEIKSGIGPVISNPIQSLSDVEKLGEITPE-EDVPYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L + ++ LIGF GAP+TVASYMI GG K++ + + F Y +A+ L+D
Sbjct: 125 LDTIKLLTTE-QLNVPLIGFAGAPFTVASYMIEGGPSKNYNKTKAFMYTEPKAWFALMDK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ Y AQI AG IQIFD+ G L ++ + + RI +++R K N I
Sbjct: 184 LANMTITYAKAQIDAGAKAIQIFDSWVGALNVADYRYFIKPVMERIFTSLREK--NVPLI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ K + L + +GLDW L A L +QGNLDP L+ +V+ +
Sbjct: 242 MFGVGASHLAKEWHDLP-LDVVGLDWRTQLDEARALGLTKTLQGNLDPAILLAPWEVIEE 300
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + S +IFNLGHG+ PQV P+ + L +
Sbjct: 301 RVTEILDKGMASPGYIFNLGHGVFPQVQPETLKRLTTFIHEYS 343
>gi|87198144|ref|YP_495401.1| uroporphyrinogen decarboxylase [Novosphingobium aromaticivorans DSM
12444]
gi|123491145|sp|Q2GC56|DCUP_NOVAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|87133825|gb|ABD24567.1| uroporphyrinogen decarboxylase [Novosphingobium aromaticivorans DSM
12444]
Length = 341
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 139/340 (40%), Positives = 209/340 (61%), Gaps = 4/340 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L+ LQG I+ PIWLMRQAGRYLPEYR++R + FL + Y + E+T+QPIRR+
Sbjct: 4 PLLKTLQGENISRRPIWLMRQAGRYLPEYRELRAEKGGFLALVYDTDAAAEVTVQPIRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G++++F+ EGP + P + + ++ L PI+++
Sbjct: 64 GFDGAILFSDILIVPYAMGQDLQFLAGEGPHLSP---RLLDAALNSLVAVPGRLSPIYET 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ ++ +L TL+GF G+PWTVA+YM++G +DH R AY++ AF ++D +++
Sbjct: 121 VAKVKAQLSPETTLLGFAGSPWTVATYMVAGEGSRDHHDTRALAYRDPSAFQAIIDAITE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V+ EYL Q+ AG + +Q+FD+ +G L EFE + RI SA++++YP+ I F
Sbjct: 181 VTIEYLSGQVEAGAEGLQLFDSWSGSLAPAEFERWVIAPNARIASAMQQRYPHVPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y R T NA+G+D ++ PL A EL PVQGNLDP+ L+ G +
Sbjct: 241 KGAGEKLSAYARETGVNAVGVDETIDPLWAARELPANMPVQGNLDPLLLLSGGPELERQT 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L+ P +FNLGHGI +NV L+K VR
Sbjct: 301 IRVLEAFADRPHVFNLGHGIGQHTPIENVEALLKIVRGWS 340
>gi|294632017|ref|ZP_06710577.1| uroporphyrinogen decarboxylase [Streptomyces sp. e14]
gi|292835350|gb|EFF93699.1| uroporphyrinogen decarboxylase [Streptomyces sp. e14]
Length = 356
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+R
Sbjct: 18 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIG-MLESCARPELAAEITLQPVR 76
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAI FSDI+V A+G + GP ++ P T+E L DL + +
Sbjct: 77 RHDVDAAIYFSDIVVPLKAIGVELDIKPGVGPVVERPFRTRED--LARLRDLTPEDVPYV 134
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG + + + Y + + + LLD
Sbjct: 135 TEAIGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPQLWADLLDR 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++A +L QI AG +Q+FD+ AG L ++ + ++ AV I
Sbjct: 194 LAVITAGFLKVQIEAGASAVQLFDSWAGALAPADYRRSVLPASAKVFEAVAGY--GVPRI 251
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L + +
Sbjct: 252 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAVRRVGPGKALQGNLDPTVLFASREAVE 310
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L+ +FNLGHG+ P DP + LV V
Sbjct: 311 AKTREVLEAAAGLEGHVFNLGHGVMPATDPDALTRLVAYVHEH 353
>gi|256395902|ref|YP_003117466.1| uroporphyrinogen decarboxylase [Catenulispora acidiphila DSM 44928]
gi|256362128|gb|ACU75625.1| uroporphyrinogen decarboxylase [Catenulispora acidiphila DSM 44928]
Length = 401
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 120/345 (34%), Positives = 180/345 (52%), Gaps = 17/345 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L + ++ P+W MRQAGR LPEY+++R LD C P+ E+TLQP+RRY
Sbjct: 65 FLRAARREPVSRTPVWFMRQAGRALPEYKKVRTGIP-MLDACLRPDLVTEITLQPVRRYG 123
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNIDLFLNYLLP 122
DAA+L+SDI+V A+G V V N GP + P+ +I L+P D L
Sbjct: 124 VDAAVLYSDIVVPLKAIGVEVEIVPNVGPVIAHPVRDLSGLDQIRPLDPATD-----LAF 178
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ L +L LIGF GAP+TVASY+I GG K+H + + F L+D
Sbjct: 179 ATEAVRQLVGEL-GSTPLIGFGGAPFTVASYLIEGGPSKNHEKTKAMMLGAPELFAALMD 237
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D++A ++ Q+ AG V+Q+FD+ AG L ++E Y +++ ++
Sbjct: 238 RLADLTAGFMRVQVEAGASVVQLFDSWAGALSPRDYERYVMPHSAKVLDSLADL--GVPR 295
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L ++ +G+DW VPL A + + VQGNLDP + V+
Sbjct: 296 IHFGVGTGELLPLMAA-AGADVVGVDWRVPLDEASRRIGPDYAVQGNLDPSVMFAPWPVI 354
Query: 302 IDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +LD + IFNLGHG+TP +DP + +V+ V
Sbjct: 355 ETRVREVLDEGSRTPGHIFNLGHGVTPDMDPDRLARVVELVHEAS 399
>gi|167627169|ref|YP_001677669.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189083007|sp|B0TWR0|DCUP_FRAP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|167597170|gb|ABZ87168.1| Uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 344
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 193/347 (55%), Gaps = 9/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ + + PPIW+MRQAGRYLPEYR +R KF+NF+DMC + E+ L P+
Sbjct: 2 RKLFLDAFKHEKLEKPPIWIMRQAGRYLPEYRAVRSKFENFMDMCRNADACCEVALHPLE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP DPI +++ + + + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGVGPVFSDPIESEKDLNRLKSAEDSVGDLEYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + + ++ LIGF G+PWT+A+YM+ G K + R Y N + + LL
Sbjct: 122 YNAVRTTKAAI--NVPLIGFTGSPWTLAAYMVEGSGSKQFSKLRKMMYANPQLMHALLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L +++ ++ + + I V++K N +
Sbjct: 180 LADITVIYLLEQVKAGASSLMIFDTWGGILPLEQYKEFSLKYMEYIAKNVKQK-SNVPVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DW+V L A + +QGN DP L + +
Sbjct: 239 FFTKGGSNFFEELKDKS-CDGVGVDWNVTLDQARHRIGVGKVLQGNFDPAFLYGTSDSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V ++ + S +I NLGHGI P ++P NV +V +R +
Sbjct: 298 NTVKKNMEFIQSDKLNNYIVNLGHGIYPDINPDNVKIMVDAIREFSV 344
>gi|50289463|ref|XP_447163.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526472|emb|CAG60096.1| unnamed protein product [Candida glabrata]
Length = 360
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 185/352 (52%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP WLMRQAGRYLPEY +++ ++F ++C E E+T+QP+
Sbjct: 6 KNDLILRAARGEAVERPPCWLMRQAGRYLPEYHEVK-GNRDFFEVCRDAEVASEITIQPV 64
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY- 119
RRY DAAI+FSDILVI A+G V VE +GP +P+ T E + + +
Sbjct: 65 RRYAGLLDAAIIFSDILVIPQAMGMKVEMVEGKGPHFPEPLRTSEDLQKVLDYKVDIKKE 124
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ RKKL + L GFCGAPWT+ YM GG + + + + +
Sbjct: 125 LNWAFEAITLTRKKLDGQVPLFGFCGAPWTLLVYMTEGGGSRLFRFAKQWINEKPEESHK 184
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I + V ++
Sbjct: 185 LLQAITDVAVEFLAQQVVAGAQILQVFESWGGELSAGDFDEFSLPYLRQIATKVPKRLKE 244
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+ I FAKG+ Y L + N + LDW A+++ +QGNLDP
Sbjct: 245 LGVEEHIPMIVFAKGSWYALDKLCD-SGYNVVSLDWCWDPKEAVKINNNRVVLQGNLDPG 303
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++++ +++ G G +I N GHG P +D + + ++
Sbjct: 304 VMYGSDEIISKKTKTMIEGFGGGKKNYIVNFGHGTHPFMDTEKIRHFLEECH 355
>gi|172056737|ref|YP_001813197.1| uroporphyrinogen decarboxylase [Exiguobacterium sibiricum 255-15]
gi|171989258|gb|ACB60180.1| uroporphyrinogen decarboxylase [Exiguobacterium sibiricum 255-15]
Length = 348
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 109/347 (31%), Positives = 181/347 (52%), Gaps = 10/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M L ++G ++ P+W MRQAGRY EYR+I+ K + ++ + PE +T
Sbjct: 2 MKNFNDTFLRAIRGEEVSHVPVWYMRQAGRYQAEYREIK-KTRTLFEITHDPELCAYVTE 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+++ DAAIL+ DI+ ++G +V GP + +PI T +
Sbjct: 61 LPVKQLGVDAAILYKDIMTPLPSMGVDVEIKSGIGPVIANPIRTMDDVQALQTFKK--ED 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ IF++I +LR++L + LIGF GAP+T+ASYMI GG K + + + Y + ++
Sbjct: 119 IPYIFETIKLLRERL--EVPLIGFSGAPFTLASYMIEGGPSKGYHKTKALMYGHPDVWHA 176
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L D+ +Y+ AQ+ AG+ QIFD+ G +++ Y ++ RI + ++
Sbjct: 177 LMEKLGDMVIDYIKAQVDAGIQAFQIFDSWVGTTSRNDYVLYIKPTMERIFTELKET--G 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ + + L + +GLDW + + A E +QGNLDP L+ +
Sbjct: 235 VPMIMFGVGASHLAEEWHDLP-LDVVGLDWRLSVDAARERGLTKTLQGNLDPSYLLAPWE 293
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ ILD + FIFNLGHGI P+VDP+ + L +
Sbjct: 294 ILEAKTKEILDMGMKRPGFIFNLGHGIFPEVDPEVLKRLTAYIHDYS 340
>gi|29828770|ref|NP_823404.1| uroporphyrinogen decarboxylase [Streptomyces avermitilis MA-4680]
gi|38257428|sp|Q82KY4|DCUP_STRAW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29605875|dbj|BAC69939.1| putative uroporphyrinogen decarboxylase [Streptomyces avermitilis
MA-4680]
Length = 355
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 177/343 (51%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ + + P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+R
Sbjct: 17 ESAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVAEITLQPVR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+N DAAI FSDI+V A+G ++ GP ++ PI T+ L DL + +
Sbjct: 76 RHNVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVVEKPIRTRAD--LAQLRDLTPEDVSYV 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG K+H + Y + + + LLD
Sbjct: 134 TEAIKLLTAEL-GETPLIGFAGAPFTLASYLVEGGPSKNHEHTKALMYGDPQLWADLLDR 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 193 LAEITSAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASTKVFQAVESY--GVPRI 250
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L + +
Sbjct: 251 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGTGKALQGNLDPAVLFSTTEAVE 309
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD +FNLGHG+ P DP + LV+ V ++
Sbjct: 310 TKTREVLDAAAGLEGHVFNLGHGVPPTTDPDALTRLVEYVHTQ 352
>gi|57242034|ref|ZP_00369974.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis RM3195]
gi|57017226|gb|EAL54007.1| uroporphyrinogen decarboxylase [Campylobacter upsaliensis RM3195]
Length = 340
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 117/340 (34%), Positives = 183/340 (53%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ P+W+MRQAGRYL EY +RK +FL +C + E++LQP+
Sbjct: 3 FIDACFKRQTPYTPVWMMRQAGRYLSEYMAVRKSAGDFLSLCKDYQKASEVSLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDILV+ +G +RF + EGP +P+ +E ++ + L ++ +
Sbjct: 63 VDAAIIFSDILVVPLEMGLELRFEKGEGPVFENPLQNKEDLNKLDDLS-AIKKLHYVYDA 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S+ R+KL LIGFCG+ WT+A+YMI G K++ + + YQN + +L L++
Sbjct: 122 LSLTREKLAKDKALIGFCGSAWTIATYMIEGRGSKNYAKCKKMLYQNPELLHQILRKLNE 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V YL QI AG + +QIFD+ AG L + F ++ + + S +++KYP+ I F
Sbjct: 182 VLKLYLEEQIRAGANAVQIFDSWAGALEKEAFFEFSFSYMCELSSYLKQKYPHIPVIVFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L + + G+DWS PL A +L + +QGN++P RL + GV
Sbjct: 242 KGVSGFLDKI--EGEFDVFGVDWSTPLDLARDKLSHKFTLQGNMEPCRLY-DKNAIKKGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL ++ IFNLGHGI P + +N +K V+
Sbjct: 299 EQILQIMQGKAHIFNLGHGILPDIPVENAKYFIKLVQESS 338
>gi|207092174|ref|ZP_03239961.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPKX_438_AG0C1]
Length = 339
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKTGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLDAAKKILGGKYVLQGNLEPTRLY-DKSALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|148242018|ref|YP_001227175.1| uroporphyrinogen decarboxylase [Synechococcus sp. RCC307]
gi|166234293|sp|A5GSG3|DCUP_SYNR3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|147850328|emb|CAK27822.1| Uroporphyrinogen decarboxylase [Synechococcus sp. RCC307]
Length = 352
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 100/343 (29%), Positives = 181/343 (52%), Gaps = 6/343 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ +L +G + PP+W+MRQAGRY+ YR +R K+ +F + P+ + E+++
Sbjct: 1 MSDALPLLLRAARGEQVERPPVWMMRQAGRYMKIYRDLRDKYPSFRERSENPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLN 118
QP + D ILFSDIL +G + +E++GP+++ PI ++ L P +
Sbjct: 61 QPYNAFQPDGVILFSDILTPLPGMGIDFDIIESKGPQINDPIRNLAQVEALRPLVPA--E 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + + LR + N+ T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 119 TMPFVGEVLGRLRSSVGNNATVLGFVGAPWTLAAYVVEGKSSKNYAVIKAMAFREPEMLH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ ++ A YL QI +G V+Q+FD+ AG L +++ +AA +++ V++ +P
Sbjct: 179 KLLNHFAESIATYLRYQIDSGAQVVQMFDSWAGELSPADYDTFAAPYQRKVVELVKQTHP 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVG 297
+ I + G+ +L+ R T + I LDW+V ++ L VQGN+DP L
Sbjct: 239 DTPMILYISGSAGVLERMGR-TGVDFISLDWTVDMADGCARLPHHLGVQGNVDPGLLFGT 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + ++ + I NLGHGI P +N +
Sbjct: 298 PEAIRVRIDDTVRKARGRRHILNLGHGILPGTPEENGAAFFEA 340
>gi|124515862|gb|EAY57371.1| Uroporphyrinogen decarboxylase [Leptospirillum rubarum]
Length = 356
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 110/341 (32%), Positives = 181/341 (53%), Gaps = 6/341 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G PP+W+MRQAGRY+PEY++IRKK +FL +C TP+ + T+ P+
Sbjct: 6 KNDLFLRACRGEKTERPPVWIMRQAGRYMPEYQEIRKKT-SFLGLCKTPDLAAQATMLPV 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL+ +A+G + F E++GP + + + + + +
Sbjct: 65 DMLGVDAAILFSDILIPVEAMGMELEFSEHKGPSFPRPVQSRMDVDRLLVPEPVAHTGFV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I + ++L + LIGF GAP+T+A+YM+ G KD + + + + + LLD
Sbjct: 125 AEAIREINRRLSGRLPLIGFAGAPFTLATYMVEGEISKDFSRVKQMMFSDPETLHTLLDR 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ YL QI AG+ QIFDT AG L + ++A V RI+ +++R I
Sbjct: 185 ITETVIRYLEMQIEAGIHAYQIFDTWAGSLSPVHYRSFALPYVRRIVDSLQRH--GIPSI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMI 302
+ G+ +L++ +N + +DW + L+ E +QGNLDP+ L+ ++
Sbjct: 243 LYVNGSCALLEDMV-TAGTNVVSVDWRMSLANVRERVPASVSIQGNLDPVSLLGTPAILR 301
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
D IL+ + G ++FNLGHGI P LV V+
Sbjct: 302 DETRRILEDMKGRPGYVFNLGHGILPSTPVSMAKYLVSLVQ 342
>gi|241667731|ref|ZP_04755309.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876275|ref|ZP_05248985.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842296|gb|EET20710.1| uroporphyrinogen decarboxylase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 344
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 191/347 (55%), Gaps = 9/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ + + PPIW+MRQAGRYLPEYR +R KF+NF+DMC + E+ L P+
Sbjct: 2 RKLFLDAFKHEKLEKPPIWIMRQAGRYLPEYRAVRSKFENFMDMCRNADACCEVALHPLE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP DPI +++ + + + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGVGPVFSDPIESEKDLNRLKSAEDSVGDLEYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + + ++ LIGF G+PWT+A+YM+ G K + R Y N + + LL
Sbjct: 122 YNAVRTTKAAI--NVPLIGFTGSPWTLAAYMVEGSGSKQFSKLRKMMYANPQLMHALLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL+ Q+ AG + IFDT G L ++ ++ + + I V++K N +
Sbjct: 180 LADIIVIYLLEQVKAGASSLMIFDTWGGILPLEQYREFSLKYMEYIAKNVKQK-SNVPVV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DW+V L A + +QGN DP L + +
Sbjct: 239 FFTKGGSNFFEELKDKS-CDGVGVDWNVTLDQARHRIGVGKVLQGNFDPAFLYGTSDSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V ++ + S +I NLGHGI P ++P NV +V +R +
Sbjct: 298 NTVKKNMEFIQSDKLNNYIVNLGHGIYPDINPDNVKIMVDAIREFSV 344
>gi|15611618|ref|NP_223269.1| uroporphyrinogen decarboxylase [Helicobacter pylori J99]
gi|8928083|sp|Q9ZLM8|DCUP_HELPJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|4155089|gb|AAD06123.1| UROPORPHYRINOGEN DECARBOXYLASE [Helicobacter pylori J99]
Length = 339
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGVYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|156742005|ref|YP_001432134.1| uroporphyrinogen decarboxylase [Roseiflexus castenholzii DSM 13941]
gi|189083016|sp|A7NKU6|DCUP_ROSCS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|156233333|gb|ABU58116.1| uroporphyrinogen decarboxylase [Roseiflexus castenholzii DSM 13941]
Length = 352
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 9/346 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + + P+W MRQAGRY+PEYR IR+++ FLDM TPE E+T+QP+
Sbjct: 4 HRFLAACRRQPTDATPVWFMRQAGRYMPEYRAIRERYG-FLDMVKTPELAAEITMQPLLA 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAI+F+DIL + + +G + + + EGP + +P+ + + D +
Sbjct: 63 FPVDAAIIFADILPLLEGIGLQLTYEQGEGPVIHNPLRSSADIAALRDADPR-ETVAYTI 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+I +++++L LIGF GAP+T+A+Y + GG +DH + Y +A+ L++ L
Sbjct: 122 QAIRLVKRELEERAPLIGFSGAPFTLAAYAVEGGSSRDHRLTKALMYAEPQAWRDLMERL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNAK 241
+ + YLIAQI AG D +Q+FD+ AG L ++ Y V + I VR P
Sbjct: 182 TTQVSAYLIAQIEAGADAVQLFDSWAGALAPGDYAEYVLPFVQQCIINVRAGCGVVPPPP 241
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQV 300
I F G ML R TD++ IGLDW + L ++ VQGNLDP L+
Sbjct: 242 IIYFGVGMSGML-GMLRQTDADVIGLDWRIYLDDGWAQVGPGVAVQGNLDPHTLLAPWSD 300
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ILD S P IFNLGHGI P+ V L + V
Sbjct: 301 VRRRAADILDRAASRPGHIFNLGHGIVPETPVDTVRRLAEFVHEYS 346
>gi|284928914|ref|YP_003421436.1| uroporphyrinogen decarboxylase [cyanobacterium UCYN-A]
gi|284809373|gb|ADB95078.1| uroporphyrinogen decarboxylase [cyanobacterium UCYN-A]
Length = 354
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 100/338 (29%), Positives = 177/338 (52%), Gaps = 6/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G +++ PP+W+MRQAGRY+ YR +R ++ +F + P +E++LQP +
Sbjct: 10 LLRAARGEILDRPPVWMMRQAGRYMKVYRDLRDRYPSFRERSENPNLAIEISLQPWHAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL +G + + N+GP + P I T + + DL LP ++
Sbjct: 70 PDGVIMFSDILTPLSGMGVSFDIIPNKGPVISPAIRT--LKQIEDLHDLEPEESLPFVKT 127
Query: 127 I-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I LRK++ N T++GF GAPWT+A+Y I G K++ + A+ + LL ++
Sbjct: 128 ILQSLRKEVGNQSTVLGFVGAPWTLAAYAIEGKSSKNYTITKAMAFSEPEILHRLLSKIT 187
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ A Y QI G +IQ+FD+ AG L ++E++A ++I +++ YP+ I +
Sbjct: 188 NSIATYACHQIACGAQIIQLFDSWAGHLSPQDYESFALPYQQQVIHKIKKIYPDTPVILY 247
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ L + ++ + +DW++ ++ A L +QGN+DP L ++V+ +
Sbjct: 248 INSSAGKLNQM-ECSKADIVSIDWTIDMAEARQRLSNHITIQGNIDPGILFGSHKVIKER 306
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + G G I NLGHG+ +NV + +
Sbjct: 307 IIDTVQKAGKGRHILNLGHGVVVGTPEENVRYFFEIAK 344
>gi|225448635|ref|XP_002274385.1| PREDICTED: similar to Uroporphyrinogen decarboxylase, chloroplastic
[Vitis vinifera]
Length = 459
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 100/326 (30%), Positives = 176/326 (53%), Gaps = 4/326 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + +L ++G + PP+WLMRQAGRY+ Y+ I +K+ +F + + VE++LQ
Sbjct: 48 NATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQ 107
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + ++ +GP +P+ T + + + +
Sbjct: 108 PWKVFKPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREF-VPEDSV 166
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ILRK++ N ++GF GAP+T+ASY++ GG K + + A+ + + L
Sbjct: 167 PYVGEALTILRKEVDNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHAL 226
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A+Y+ Q G +QIFD+ A L +FE ++ + +I+ +V++ +PN
Sbjct: 227 LQKFTTSMAKYIQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQTHPNL 286
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L + VQGN+DP L +
Sbjct: 287 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVLFGSKE 345
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGI 325
+ + +N + G G I NLGHGI
Sbjct: 346 FITNRINDTVRKAGKGKHILNLGHGI 371
>gi|188997009|ref|YP_001931260.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932076|gb|ACD66706.1| uroporphyrinogen decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 348
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 112/348 (32%), Positives = 177/348 (50%), Gaps = 8/348 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + L + + PIWLMRQAGRY+ EYRQ+R+ +F + + V+ ++
Sbjct: 3 NPKNDLFLRACRRQKVERTPIWLMRQAGRYMKEYRQLREIAGSFKNYYKNVDLAVKASIL 62
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P DA I+FSDIL +++G F E EGP +PI +E + +
Sbjct: 63 PYTLLGVDAIIIFSDILTPLESIGMKFDFKEGEGPVFENPIKGKEDIQSLK--EFNAEDV 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + I + + + I +IGF GAP+T+A+YMI G KD + + F Y N F L
Sbjct: 121 YFVGEIIKGVNQTINREIPVIGFAGAPFTIAAYMIEGRGSKDFKKTKSFMYNNQEDFKIL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D++ +YL QI +G D +QIFD+ AG L +++ + SV ++I ++ + N
Sbjct: 181 LDKIADMTIKYLSFQIESGADAVQIFDSWAGHLSPKDYKEFVLPSVKKVIENLK--HYNK 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQ 299
I F KG + ++++ +DW + + A +L + VQGNLDPM L
Sbjct: 239 PIIHFTKGVCGFMDFILD-SNADVYSIDWMIDIKKAKDLIYPKASVQGNLDPMVLYADKD 297
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ I+ G IFNLGHG+ P +D V LV TV+ +
Sbjct: 298 IIKKEAEYIIKSWGEDTGHIFNLGHGLMPDMDASKVKFLVDTVKEISV 345
>gi|261838153|gb|ACX97919.1| uroporphyrinogen decarboxylase [Helicobacter pylori 51]
Length = 340
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 183/339 (53%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 4 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 64 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 122 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AG + + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 182 ELIEYLSLQIQAGANAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPIILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 242 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKSTLEEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 EKILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|308184388|ref|YP_003928521.1| uroporphyrinogen decarboxylase [Helicobacter pylori SJM180]
gi|308060308|gb|ADO02204.1| uroporphyrinogen decarboxylase [Helicobacter pylori SJM180]
Length = 339
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 118/339 (34%), Positives = 183/339 (53%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ R+K +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRQKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT + + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVEILKI--GAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKVLGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL +G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKAMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|317179031|dbj|BAJ56819.1| uroporphyrinogen decarboxylase [Helicobacter pylori F30]
Length = 339
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHVPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGTYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKSALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|121607014|ref|YP_994821.1| uroporphyrinogen decarboxylase [Verminephrobacter eiseniae EF01-2]
gi|166234294|sp|A1WDU6|DCUP_VEREI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|121551654|gb|ABM55803.1| uroporphyrinogen decarboxylase [Verminephrobacter eiseniae EF01-2]
Length = 370
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 20/359 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + + P+WLMRQAGRYLPEY+ R + +F+ + + +Y E+TLQP+
Sbjct: 8 NDSFLRACRRQATDYTPLWLMRQAGRYLPEYQASRARAGSFMGLATSVDYATEVTLQPLE 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ DAAILFSDIL + DA+G + F E EGPR+ + E + + + L +F
Sbjct: 68 RFPLDAAILFSDILTVPDAMGLGLSFAEGEGPRLAKVVRDEATVAALAVP-DMARLRYVF 126
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +R+ L + LIGF G+PWT+A YM+ G D+ + Y + +L
Sbjct: 127 DAVASIRRALNGRVPLIGFSGSPWTLACYMVEGRGSDDYRLVKGLMYSRPDLMHRILAIN 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---YPNAK 241
+D A YL AQI AG + +FD+ G L + F+ ++ R+++ ++R +
Sbjct: 187 ADTVAAYLNAQIDAGAQAVMVFDSWGGVLADGAFQAFSLAYTARVLAQLQRTGVDGSDVP 246
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL------QKEGPVQGNLDPMRLV 295
I F KG L++ + L D +GLDW+ L+ A L +QGN+DP L+
Sbjct: 247 RIVFTKGGAPWLQDMQSL-DCQVLGLDWTANLASARALVGGAVGGPGKALQGNIDPHVLL 305
Query: 296 VGNQVMIDGVNAILDVLGSGP---------FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ V +LD G IFNLGHGI+ P +V LV+ V S
Sbjct: 306 APPARIVQQVQQVLDSFGPPHTDRSTTGPTHIFNLGHGISQFTPPAHVAALVEAVHSYS 364
>gi|157691740|ref|YP_001486202.1| uroporphyrinogen decarboxylase [Bacillus pumilus SAFR-032]
gi|172045998|sp|A8FBM5|DCUP_BACP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157680498|gb|ABV61642.1| uroporphyrinogen decarboxylase [Bacillus pumilus SAFR-032]
Length = 352
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 8 NDTFLKACKGEKTDHVPAWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ A+G +V GP +D PI T+ + L +
Sbjct: 67 QYGVDAAILYKDIMTPLPAIGVDVEIKNGIGPVIDSPIRTKADIERLGELHPE-EDLPYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L K+ ++ LIGF GAP+T+ASYMI GG K++ + + Y + L++
Sbjct: 126 LDTIQLLTKE-QLNVPLIGFAGAPFTMASYMIEGGPSKNYHKTKALMYSEPETWMLLMNK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ Y+ AQ+ AGV QIFD+ G L ++ + + RI + ++ + N I
Sbjct: 185 LADMTITYIRAQVKAGVSAFQIFDSWVGALNAADYRTFIKPVMQRIFTELKSE--NVPMI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ GA +++K++ L + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 243 MYGVGASHLVKDWHDLP-LDVVGLDWRMSVDEARKEGLTKTLQGNLDPTILLSPWEVIEE 301
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD + S FIFNLGHG+ P V P + L +
Sbjct: 302 RAKDILDQGMKSDHFIFNLGHGVFPDVSPDTLKKLTDFIHDYS 344
>gi|320007814|gb|ADW02664.1| uroporphyrinogen decarboxylase [Streptomyces flavogriseus ATCC
33331]
Length = 369
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L+ + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQ
Sbjct: 28 ATHESAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVTEITLQ 86
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ GP + +PI T+ L DL +
Sbjct: 87 PVRRHKVDAAIYFSDIVVPLKAIGIDLDIKPGIGPVIAEPIRTRAD--LARLRDLTPEDV 144
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L +L LIGF GAP+T+ASY++ GG ++H + + Y + + L
Sbjct: 145 PYVTAAIGMLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPELWADL 203
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L++++ +L QI AG +Q+FD+ G L ++ + ++ AV
Sbjct: 204 LDRLAEITGAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASAKVFDAVASY--GV 261
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VP+ A + +QGNLDP L +
Sbjct: 262 PRIHFGVGTGELLGLMGE-AGADVVGVDWRVPMDEGARRVGPGKALQGNLDPAVLFAPTE 320
Query: 300 VMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +LD IFNLGHG+ P DP + LV+ V +
Sbjct: 321 AVEAKAREVLDAAAGLDGHIFNLGHGVMPSTDPDALTRLVEYVHRQ 366
>gi|188527546|ref|YP_001910233.1| uroporphyrinogen decarboxylase [Helicobacter pylori Shi470]
gi|238058040|sp|B2UTM1|DCUP_HELPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|188143786|gb|ACD48203.1| uroporphyrinogen decarboxylase [Helicobacter pylori Shi470]
Length = 339
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIEAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|297379805|gb|ADI34692.1| uroporphyrinogen decarboxylase [Helicobacter pylori v225d]
Length = 339
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ + N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMDLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|218295097|ref|ZP_03495933.1| uroporphyrinogen decarboxylase [Thermus aquaticus Y51MC23]
gi|218244300|gb|EED10825.1| uroporphyrinogen decarboxylase [Thermus aquaticus Y51MC23]
Length = 341
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 121/346 (34%), Positives = 182/346 (52%), Gaps = 11/346 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M IL +G PP+W MRQAGRY Y++IRK++ ++ PE E+TL
Sbjct: 1 MEGVNDLILRAARGEPTPRPPVWFMRQAGRYQKSYQEIRKRY-TLPEIVKNPEVAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLN 118
P+R DAAILF+DI +G + VE +GP + PI +E + L P +
Sbjct: 60 LPVRELGVDAAILFADITTPLYGMGVALDLVEGKGPVIHKPIRDKEGVEALRPLVPE--E 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L+K+L + LIGF GAP+T+ASY++ GG + Q + F Y ++
Sbjct: 118 AVPFVLEAIRLLKKEL--KVPLIGFAGAPFTLASYLVEGGPSRHFLQVKAFMYGEEALWH 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L++ A YL AQ AG D++Q+FD+ G LG ++ Y + R+ A+R
Sbjct: 176 RLMEKLTEAMARYLEAQARAGADLLQVFDSWVGALGPADYRRYVKPHMKRLFQALRPL-- 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G +L+ R + +GLD PL +A E+ PVQGNLDP L
Sbjct: 234 GVPVIHFGVGTMGLLQEMREAGG-DVMGLDHHTPLPWAREVLGNTPVQGNLDPAVLFAPK 292
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+V+ V IL+ G IFNLGHGI P+ +V +V+ V+
Sbjct: 293 EVIRREVGRILEENAGRAGHIFNLGHGILPKTPHDHVAYVVELVKE 338
>gi|320450790|ref|YP_004202886.1| uroporphyrinogen decarboxylase [Thermus scotoductus SA-01]
gi|320150958|gb|ADW22336.1| uroporphyrinogen decarboxylase [Thermus scotoductus SA-01]
Length = 348
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 185/347 (53%), Gaps = 11/347 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M IL+ +G + PP+W MRQAGRY EY++IR+++ ++ PE E+TL
Sbjct: 6 MKGVNDLILQAARGRPTSRPPVWFMRQAGRYQKEYQEIRRRY-TLPEIVQNPEVCAEVTL 64
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLN 118
P+++ DAAILF+DI +G + VE +GP + PI + + L P
Sbjct: 65 LPVKQLGVDAAILFADITTPLYGIGVELDLVEGKGPVIHRPIRDSKGVEALRPLEPE--E 122
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I +L+++L + LIGF GAP+T+ASY+I GG + + + F Y+ ++
Sbjct: 123 AVPFVLETIRLLKREL--EVPLIGFAGAPFTLASYLIEGGPSRQFKEVKAFMYREEALWH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ A YL AQ+ AG D++Q+FD+ G L ++ Y + R+ +R
Sbjct: 181 QLLEKLTQAMARYLKAQVEAGADLLQVFDSWVGALSPADYRRYVKPHMARLFQELRPL-- 238
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G +LK + + +GLD PL +A E + P+QGNLDP+ L
Sbjct: 239 GVPVIHFGVGTMGLLKEMQEAGG-DVMGLDHHTPLPWAREALGQTPIQGNLDPVVLFAPK 297
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ V IL S P IFNLGHGI P ++V +V+ ++ +
Sbjct: 298 EVIRREVERILAENASRPGHIFNLGHGILPGTPVEHVRYVVELLKEK 344
>gi|123968174|ref|YP_001009032.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str.
AS9601]
gi|166234271|sp|A2BQ64|DCUP_PROMS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123198284|gb|ABM69925.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. AS9601]
Length = 346
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 107/348 (30%), Positives = 181/348 (52%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGQDLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI T +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRTLNQVENLREL-NPSES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A+ +
Sbjct: 120 LSFVGQVLSSLKKDVNNEATILGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFNEPDLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ +YP
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDMFAGPYQKKVVEIVKAEYPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGN 298
I + G+ +L+ + T + I LDW+V + A + G +QGN+DP L
Sbjct: 240 TPIILYISGSAGVLERMAK-TGVDIISLDWTVDIEEACKRIPRGIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + + +I NLGHGI P +N + +K+
Sbjct: 299 KSIKERIDDTFNKIKDRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|163785222|ref|ZP_02179898.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879510|gb|EDP73338.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 186/346 (53%), Gaps = 6/346 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L ++ I P+WLMRQAGRY+PEYR++RK +F E +V+ ++ P
Sbjct: 5 KNDLLLRAIKKEPIERTPVWLMRQAGRYMPEYRELRKTAGDFKSFYKNVELSVKASVLPY 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ DA I+FSDIL + +G N F E EGP +PI + E +N L + +
Sbjct: 65 KLLGVDATIIFSDILTPLEPMGFNFEFREGEGPVFLEPIKSPED--INKLRPLNVEDVKY 122
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + I + ++L I IGFCGAP+T+A+YMI G +D + + F Y N R F LLD
Sbjct: 123 VGEIIKGVNEELDRAIPTIGFCGAPFTLAAYMIEGRTSRDFKKAKAFMYDNPRDFKKLLD 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D +YL QI +G D +QIFD+ AG L +++ +A V +II ++ +P
Sbjct: 183 KLADSLIDYLSFQIESGADTVQIFDSWAGHLSPDDYKEFALPPVKKIIKKLKEIHPEIPI 242
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVM 301
I F KG L +Y + ++ +DW + L E + VQGNLDP+ L V+
Sbjct: 243 IHFTKGVAGFL-DYMITSGADVYSVDWMIDLKVVKEKAFPKSAVQGNLDPIVLYASKDVI 301
Query: 302 IDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + +L +FNLGHG+ P ++ + V LV+TV+ E +
Sbjct: 302 REKIINLLGKWEKDSGHVFNLGHGLMPDMEFEKVKYLVETVKKESV 347
>gi|308182767|ref|YP_003926894.1| uroporphyrinogen decarboxylase [Helicobacter pylori PeCan4]
gi|308064952|gb|ADO06844.1| uroporphyrinogen decarboxylase [Helicobacter pylori PeCan4]
Length = 339
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|54025708|ref|YP_119950.1| uroporphyrinogen decarboxylase [Nocardia farcinica IFM 10152]
gi|81679905|sp|Q5YTA5|DCUP_NOCFA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54017216|dbj|BAD58586.1| putative uroporphyrinogen decarboxylase [Nocardia farcinica IFM
10152]
Length = 354
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 15/348 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L G + P+W MRQAGR LPEYR++R L+ C+ PE E+T+QPI
Sbjct: 13 TDAPFLAAATGATPSRRPVWFMRQAGRSLPEYRELRAGIG-MLESCFDPELVCEITMQPI 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDI+V A G ++ V GP + P+ + P L +
Sbjct: 72 RRHGVDAAILFSDIVVPLKAAGIDLDIVAGVGPVVAAPVRSVADVRALPR--LRPEEVGA 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + + +L L LIGF GAP+T+ASY++ GG K H + + Y + + ++ LL
Sbjct: 130 VVEGVRLLVDAL-GQTPLIGFAGAPFTLASYLVEGGPSKHHERTKAMMYADPKTWHELLG 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D++ +L AQ+ AGVD +Q+FD+ AG L ++ + R+ + +
Sbjct: 189 VLTDITIAFLRAQLDAGVDAVQLFDSWAGALSPADYRAFVLPHSERVFTEIADA--GVPR 246
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L ++ +G+DW V L A + +QGNLDP L G + +
Sbjct: 247 IHFGVGTGELLGAMGE-AGADVVGVDWRVSLTEAARRVGPGKALQGNLDPAVLFAGPRAV 305
Query: 302 IDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I + LG+ IFNLGHG+ P DP + LV+ V
Sbjct: 306 EAHARRIAEEADRALALGAAGHIFNLGHGVLPDTDPGVLTALVELVHE 353
>gi|217032026|ref|ZP_03437527.1| hypothetical protein HPB128_187g53 [Helicobacter pylori B128]
gi|298736298|ref|YP_003728824.1| uroporphyrinogen decarboxylase HemE [Helicobacter pylori B8]
gi|216946336|gb|EEC24942.1| hypothetical protein HPB128_187g53 [Helicobacter pylori B128]
gi|298355488|emb|CBI66360.1| uroporphyrinogen decarboxylase (HemE) [Helicobacter pylori B8]
Length = 339
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|302925262|ref|XP_003054064.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735005|gb|EEU48351.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 366
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G + PP+W+MRQAGRYLPEY + + ++F + C PE +TLQP+
Sbjct: 9 KNDLLLRAAWGQTVERPPMWVMRQAGRYLPEYHEAK-GNRDFFECCRDPEVATTITLQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL----LNPNIDLF 116
+RY DAAI+FSDILVI A+G V V+ +GP P+ T + L N+D+
Sbjct: 68 QRYAGLIDAAIIFSDILVIPQAMGMVVEMVDKKGPHFPSPLKTPDDEQYGQVLAKNVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L +++++++ R++L + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 128 AE-LDYVYKAVTLTRQRLQGQVPLIGFCGAPWTLFCYMVEGGGTKLFAQVKTWIYRYPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++D+ ++L Q+ AG ++ +FD+ AG LG + ++ + RI + K
Sbjct: 187 SKKLLAKIADICVDHLALQVKAGAQLVMVFDSWAGELGPASYRQFSEPYLKRIAEKLPEK 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNL 289
F KGA Y L + L N +G+DW A++++ + QGN
Sbjct: 247 LKALGLDKVPMTVFPKGAWYALDSACDL-GYNVVGMDWLHDPKEAVKIRGDRNIVFQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L + + V ++D G+ +I NLGHGITP V+P N+ + V
Sbjct: 306 DPGVLYGTKEGITTAVQEMVDGFWVGNKGWIANLGHGITPGVNPDNLKHFFEEVH 360
>gi|239983040|ref|ZP_04705564.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
gi|291454871|ref|ZP_06594261.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
gi|291357820|gb|EFE84722.1| uroporphyrinogen decarboxylase [Streptomyces albus J1074]
Length = 354
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 115/342 (33%), Positives = 173/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ LD C PE E+T+QP+R
Sbjct: 16 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIA-MLDSCMRPELVTEITMQPVR 74
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP ++ PI T+ L DL + +
Sbjct: 75 RHGVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVVEQPIRTRAD--LARLRDLTPEDVWYV 132
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG ++H + Y + + LLD
Sbjct: 133 TEAIGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPELWADLLDR 191
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++A +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 192 LADITAGFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASRKVFEAVAGY--GVPRI 249
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G DW +PL A + VQGNLDP L + +
Sbjct: 250 HFGVGTGELLGLMGE-AGADVVGADWRIPLDEASRRIGPGKAVQGNLDPAVLFAPTEAVR 308
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L G IFNLGHG+ P DP + LV+ V +
Sbjct: 309 AKTGEVLQAAEGLEGHIFNLGHGVLPDTDPDALTRLVEDVHT 350
>gi|226306334|ref|YP_002766294.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis PR4]
gi|259645155|sp|C0ZYX0|DCUP_RHOE4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226185451|dbj|BAH33555.1| uroporphyrinogen decarboxylase [Rhodococcus erythropolis PR4]
Length = 355
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 178/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L G + P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+R
Sbjct: 15 DAPLLAAATGRTPSRRPVWFMRQAGRSLPEYREIRAGIG-MLESCFDPALVCEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G ++ V GP + +PI + P L + I
Sbjct: 74 RHDVDAAILFSDIVVPLKAAGIDLDIVAGVGPVVANPIRSIADVAALPR--LVPEEVGAI 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL
Sbjct: 132 AQAVRLLTTEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHEKTKALMHSDPKTWHALLGS 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D + +L Q+ AGVD +Q+FD+ AG L ++ + R+ + V I
Sbjct: 191 LADTTICFLQTQLKAGVDAVQLFDSWAGALSLADYREFVLPHSERVFAEVAAA--GVPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +V+
Sbjct: 249 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAAGRVGPGKALQGNLDPAVLFAGPEVID 307
Query: 303 DGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + V+ V S
Sbjct: 308 REVRRIAAEGDRAIEAGAIGHIFNLGHGVLPDTDPTAITSAVELVHS 354
>gi|46198540|ref|YP_004207.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB27]
gi|46196162|gb|AAS80580.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB27]
Length = 360
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 185/346 (53%), Gaps = 11/346 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL
Sbjct: 20 MDLVNDLILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTL 78
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
P++ DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P +
Sbjct: 79 LPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPE--E 136
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++
Sbjct: 137 AVPFVLETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWH 194
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R
Sbjct: 195 RLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPA-- 252
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G +L++ + + +GLD PL +A L PVQGNLDP L+
Sbjct: 253 GVPVIHFGVGTMGLLEDMKEAGG-DVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPK 311
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V IL G IFNLGHGI P+ +NV +V+ ++
Sbjct: 312 GVIRREVQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 357
>gi|326490007|dbj|BAJ94077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 4/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ ++G + PP+WLMRQAGRY+ Y+ + +K+ F + + VE++LQP +
Sbjct: 55 PLLVSAIKGKKVERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKV 114
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D ILFSDIL + V+ +GP + DP+ T + ++ +
Sbjct: 115 FKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREF-VPEEWVPYVG 173
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++++LR ++ N ++GF GAP+T+ASY + GG K+ + + A+ + LL
Sbjct: 174 QALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKF 233
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ A Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +P+ I
Sbjct: 234 TTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLIL 293
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+A G+G +L+ LT + + LDW+V ++ L VQGN+DP L + +
Sbjct: 294 YASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITK 352
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + GS + NLGHGI +NV + +
Sbjct: 353 RIYDTVQKAGSQGHVLNLGHGIKVGTPEENVAHFFEVAKG 392
>gi|154685469|ref|YP_001420630.1| uroporphyrinogen decarboxylase [Bacillus amyloliquefaciens FZB42]
gi|171854999|sp|A7Z323|DCUP_BACA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|154351320|gb|ABS73399.1| HemE [Bacillus amyloliquefaciens FZB42]
Length = 353
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 115/354 (32%), Positives = 188/354 (53%), Gaps = 19/354 (5%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R L+ +G N P+W MRQAGR PEYR++++K+ +++ + PE
Sbjct: 1 MSKREAFNDTFLKAARGEKTNHVPVWYMRQAGRSQPEYRKLKEKYG-LVEITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ +G +V GP +D P+ + +++ LNP
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIEKLGELNPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D + + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F +
Sbjct: 120 QD-----VPYVLETIRLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
+A+ L+D L+D+ Y AQI+AG IQIFD+ G L ++ + + RI
Sbjct: 174 MPQAWKMLMDKLADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRQFIKPVMDRIFRE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + I F GA ++ ++ L + +GLDW + + A + VQGNLDP
Sbjct: 234 LSAE--QVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLGIDDARKQGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L+ +V+ AILD + + FIFNLGHG+ P V+P+ + L V
Sbjct: 291 LLLAPWEVIEKKAKAILDQGMKTDGFIFNLGHGVFPDVNPETLKKLTAFVHEYS 344
>gi|148555742|ref|YP_001263324.1| uroporphyrinogen decarboxylase [Sphingomonas wittichii RW1]
gi|172048257|sp|A5VA70|DCUP_SPHWW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|148500932|gb|ABQ69186.1| uroporphyrinogen decarboxylase [Sphingomonas wittichii RW1]
Length = 344
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 141/339 (41%), Positives = 203/339 (59%), Gaps = 4/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL+G +PPP+WLMRQAGRYLPEYR +R+ FL++ Y + E+TLQPIRR
Sbjct: 9 RPLLAVLRGERRDPPPVWLMRQAGRYLPEYRALRETKGGFLELAYDSDAAAEITLQPIRR 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FD AILFSDIL+I A+G+++RF EGPR+ P + +++ L PI+
Sbjct: 69 FGFDGAILFSDILIIPHAMGQDLRFEAGEGPRLSP---TLVDRTLADLEPVPARLEPIYG 125
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R LP T +GF G+PWTVA+YM++G ++ + R AY++ F ++D L
Sbjct: 126 TVRRVRAALPAETTFLGFAGSPWTVATYMVAGQGSREQAETRRKAYRDPAGFQAIIDALV 185
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D +A+YL QI AGVD +Q+FD+ AG L EFE + +++ + ++P I F
Sbjct: 186 DATADYLSKQIEAGVDAVQLFDSWAGSLAPREFERWVIAPTAQLVRRLHARHPGVPVIGF 245
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
KGAG L Y R T +A+GLD +V ++A EG VQGNLDP+ LV G + +
Sbjct: 246 PKGAGGKLPAYARETGVDAVGLDETVDPAWAHANLPEGLTVQGNLDPLALVSGGEGLDTA 305
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+AIL P +FNLGHGI +V L+ VR
Sbjct: 306 VDAILGAFPGRPHVFNLGHGILLDTPIAHVERLLARVRG 344
>gi|109947902|ref|YP_665130.1| uroporphyrinogen decarboxylase [Helicobacter acinonychis str.
Sheeba]
gi|123362546|sp|Q17W45|DCUP_HELAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|109715123|emb|CAK00131.1| uroporphyrinogen decarboxylase [Helicobacter acinonychis str.
Sheeba]
Length = 339
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 117/339 (34%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFKKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G ++ F+ +GP + IT ++ ++ L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLDLEFIPKKGPHFLETIT--DLKSVDSLKVGAYKRLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI K + +++ Y + LL+ LS
Sbjct: 121 ISQTRQKLSKDKALIGFCGSPWTLATYMIESEGSKSYAKSKKMLYSEPEVLHTLLEKLSA 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWANALEKEAYLKFSWDYLKKISKELKKRYARIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGVGAYLDSI--DGEFDVFGVDWGTPLEMAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL ++G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKIMGNKGHIFNLGHGMLPDLPRENAKYLVQLVHNK 336
>gi|325108961|ref|YP_004270029.1| uroporphyrinogen decarboxylase [Planctomyces brasiliensis DSM 5305]
gi|324969229|gb|ADY60007.1| Uroporphyrinogen decarboxylase [Planctomyces brasiliensis DSM 5305]
Length = 345
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 124/342 (36%), Positives = 192/342 (56%), Gaps = 9/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++++ L+ ++ PIW+MRQAGRYLPEY +R + FL++C TPE E+T+ +
Sbjct: 6 DSRMMKALRREPVDTTPIWIMRQAGRYLPEYMAVRNRV-TFLELCQTPELAAEVTVTAQQ 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILF+D+L + +G ++ + + EGP++ +P+ T ++ L L +
Sbjct: 65 VLGVDAAILFADLLPMLMPMGIDLTYEKGEGPKIHNPLRTNADIDNFRELE-SLGELQFV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F ++ ++R++LP I L+GF GAP+T+ASY I GG K + + Y + A++ ++
Sbjct: 124 FDAVKLIREQLPADIPLLGFAGAPFTLASYCIEGGGSKSYVATKSLMYGDPTAWDAVMSR 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ YL AQI AG +Q+FD+ AGCLG ++ Y RII AV P A I
Sbjct: 184 LTNSLIRYLKAQIEAGCQAVQLFDSWAGCLGPDDYRKYVLPYTKRIIDAV---LPEAPVI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+F G +L + + AIGLDW V L+ A E + + VQGNLDP+ L V+
Sbjct: 241 NFLTGNPALLPVQKEAGGA-AIGLDWRVDLAEAWETVGYDFAVQGNLDPVTLFADIPVIR 299
Query: 303 DGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L G IFNLGHG+ P + P+NV LV+ V
Sbjct: 300 ERALEVLKKAAGRPGHIFNLGHGVMPGMKPENVKALVEIVHE 341
>gi|115452897|ref|NP_001050049.1| Os03g0337600 [Oryza sativa Japonica Group]
gi|122247045|sp|Q10LR9|DCUP2_ORYSJ RecName: Full=Uroporphyrinogen decarboxylase 2, chloroplastic;
Short=UPD2; Short=URO-D2; Flags: Precursor
gi|108708034|gb|ABF95829.1| Uroporphyrinogen decarboxylase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113548520|dbj|BAF11963.1| Os03g0337600 [Oryza sativa Japonica Group]
gi|222624887|gb|EEE59019.1| hypothetical protein OsJ_10762 [Oryza sativa Japonica Group]
Length = 390
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++ ++G + PP+WLMRQAGRY+ Y+ + ++ +F + + VE++LQ
Sbjct: 46 TAEEPLLVSAIKGRKVERPPVWLMRQAGRYMKSYQLLCERHPSFRERSENVDLVVEISLQ 105
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP DP+ T + ++
Sbjct: 106 PWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFDPLRTAAAVNEVREF-VPEEWV 164
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q+++ILR+++ N ++GF GAP+T+ASY + GG K+ + + A+ + L
Sbjct: 165 PYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEPEILHNL 224
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A Y+ Q G +QIFD+ A L +FE ++ + +I+ +V+ +P
Sbjct: 225 LQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPEL 284
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L VQGN+DP L +
Sbjct: 285 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKE 343
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + G+ + NLGHGI +NV + +
Sbjct: 344 FISKRIFDTVQKAGNSGHVLNLGHGIKVGTPEENVAHFFEVAKG 387
>gi|206602106|gb|EDZ38588.1| Uroporphyrinogen decarboxylase [Leptospirillum sp. Group II '5-way
CG']
Length = 356
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 107/341 (31%), Positives = 181/341 (53%), Gaps = 6/341 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G PP+W+MRQAGRY+PEY++IRKK +FL +C TP+ + T+ P+
Sbjct: 6 KNDLFLRACRGEKTERPPVWIMRQAGRYMPEYQEIRKKT-SFLGLCKTPDLAAQATMLPV 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL+ +A+G + F E++GP + + + + + +
Sbjct: 65 DMLGVDAAILFSDILIPVEAMGMELEFSEHKGPSFPRPVQSRMDVDRLLVPEPVAHTGFV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I + ++L + LIGF GAP+T+A+YM+ G KD + + + + + LLD
Sbjct: 125 AEAIREINRRLSGRLPLIGFSGAPFTLATYMVEGEISKDFSRVKQMMFSDPETLHTLLDR 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ YL QI AG+ QIFDT AG L + ++A V RI+ +++R I
Sbjct: 185 ITETVIRYLEMQIEAGIHAYQIFDTWAGSLSPVHYRSFALPYVRRIVDSLQRY--GIPSI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+ G+ +L++ +N + +DW + L+ + +QGNLDP+ L+ ++
Sbjct: 243 LYVNGSCALLEDMV-TAGTNVVSVDWRMSLANVRDRVPASVSIQGNLDPVSLLGTPAILR 301
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +L+ + G ++FNLGHGI P LV V+
Sbjct: 302 EETRRVLEDMKGRPGYVFNLGHGILPSTPVSMAKYLVSLVQ 342
>gi|317009381|gb|ADU79961.1| uroporphyrinogen decarboxylase [Helicobacter pylori India7]
Length = 339
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|172046170|sp|Q72L31|DCUP_THET2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 341
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 185/346 (53%), Gaps = 11/346 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL
Sbjct: 1 MDLVNDLILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
P++ DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P +
Sbjct: 60 LPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPE--E 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++
Sbjct: 118 AVPFVLETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWH 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R
Sbjct: 176 RLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPA-- 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G +L++ + + +GLD PL +A L PVQGNLDP L+
Sbjct: 234 GVPVIHFGVGTMGLLEDMKEAGG-DVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPK 292
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V IL G IFNLGHGI P+ +NV +V+ ++
Sbjct: 293 GVIRREVQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 338
>gi|297830042|ref|XP_002882903.1| hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp.
lyrata]
gi|297328743|gb|EFH59162.1| hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 104/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +++ +G ++ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQ
Sbjct: 56 SSSDPLLVKAAKGQSVSRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQ 115
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D I+FSDIL A G E +GP + PI T+E ID L
Sbjct: 116 PWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDLKRLHAID--FEKL 173
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ S+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + L
Sbjct: 174 QFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPNVLRAL 233
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+
Sbjct: 234 LSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDT 293
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
+ + G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L
Sbjct: 294 PIVFYINGNGGLLERM-KGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLP 352
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + ++ G I NLGHG+ + V +T R+
Sbjct: 353 ALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|257461230|ref|ZP_05626327.1| uroporphyrinogen decarboxylase [Campylobacter gracilis RM3268]
gi|257441258|gb|EEV16404.1| uroporphyrinogen decarboxylase [Campylobacter gracilis RM3268]
Length = 348
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 129/346 (37%), Positives = 185/346 (53%), Gaps = 10/346 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G PIW+MRQAGRYLP+Y +R++ +FL +C E+T+QP+
Sbjct: 3 FIDACFGKETPYTPIWMMRQAGRYLPQYMVVRERAGDFLSLCRDYRAASEVTIQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G ++RF EGPR DPI +Q + L ++ +
Sbjct: 63 VDAAILFSDILVVPMQMGMDLRFEAGEGPRFSDPIRSQSDLA-RLDPQKAAAELGYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS+ R +L LIGFCGAPWT+A+YMI GG K++ + Y+N + + +L +++
Sbjct: 122 ISLTRSRLAADKALIGFCGAPWTIATYMIEGGGSKNYAVCKRMLYENPQLLHEILRLVTE 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ YL QI +GVD +QIFD+ AG L +E + R + I ++ K+P+ I FA
Sbjct: 182 ATKLYLAHQIGSGVDAVQIFDSWAGALEPSAYEEFGWRYILEITEFLKAKFPHIPLIVFA 241
Query: 247 KGAGYMLKNY------RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
KG G + R + G+DWS P+ A E L + +QGNL+PMRL
Sbjct: 242 KGTGAQMSRLSSIAARRGEASFDVWGVDWSTPIELAREQLGGKFALQGNLEPMRLY-DRG 300
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ GV IL + IFNLGHGI P V +N LV V
Sbjct: 301 AIESGVREILVAMKGAAHIFNLGHGILPDVSVQNAKYLVDLVHELS 346
>gi|317180375|dbj|BAJ58161.1| uroporphyrinogen decarboxylase [Helicobacter pylori F32]
Length = 339
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGVGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKSALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|241952404|ref|XP_002418924.1| uroporphyrinogen decarboxylase, putative [Candida dubliniensis
CD36]
gi|223642263|emb|CAX44232.1| uroporphyrinogen decarboxylase, putative [Candida dubliniensis
CD36]
Length = 361
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 111/350 (31%), Positives = 179/350 (51%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY +++ K ++F + C E +T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPIWIMRQAGRYLPEYHEVKGK-RDFFETCQDAEIASAITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G + +E +GP P+ T E L
Sbjct: 67 DHFDGLIDAAIIFSDILVIPQAMGFEINMIEGKGPVFAAPLRTPEDLSRIDLKPDVKTKL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ +A + L
Sbjct: 127 AWAYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPQAAHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L D E+L QI AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 187 LQATCDACIEFLAQQIVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKEL 246
Query: 238 ---PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
+ FAKGA Y L + + + + LDW A+E+ + +QGNLDP
Sbjct: 247 GIEEHIPMTVFAKGAWYALDSLCD-SGYDCVSLDWLYKPEDAVEVVNGRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V +L+ G +I N GHG P +DPK + ++
Sbjct: 306 VMYGSDEVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKIEFFLQQCH 355
>gi|330466517|ref|YP_004404260.1| uroporphyrinogen decarboxylase [Verrucosispora maris AB-18-032]
gi|328809488|gb|AEB43660.1| uroporphyrinogen decarboxylase [Verrucosispora maris AB-18-032]
Length = 365
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 176/344 (51%), Gaps = 10/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + + P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+R
Sbjct: 22 DSPFVRACRRRPVPHTPVWFMRQAGRSLPEYREIRANVA-MLESCRRPDLVTEITLQPVR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ T I + + +
Sbjct: 81 RHKVDAAILFSDIVVPVAAAGVDLDIVPGTGPVVAEPVRTAADVQRIRPI--GRDDVPYV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +L K+L LIGF GAP+T+ASY++ GG ++H + + Y + ++ L
Sbjct: 139 DEAVRMLVKEL-GDTPLIGFAGAPFTLASYLVEGGPSRNHVKTKALMYGDPELWHALAGR 197
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++V+ +L QI AGV +Q+FD+ AG L E ++ + ++S + I
Sbjct: 198 LAEVTLAFLRVQIAAGVSAVQLFDSWAGALSEADYRRFVLPHSTTVLSGLADA--GIPRI 255
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L ++ +G+DW PL A + + VQGNLDP L V+
Sbjct: 256 HFGVGTAELLGAMGE-AGADVVGVDWRTPLDVATCRIGPDKAVQGNLDPCLLFAPWPVIE 314
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + P +FNLGHG+ P+ DP+ + +V V
Sbjct: 315 AEVRRILDQGRAAPGHVFNLGHGVLPETDPEVLTRVVALVHELS 358
>gi|57867299|ref|YP_188937.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis RP62A]
gi|71153330|sp|Q5HNA4|DCUP_STAEQ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|57637957|gb|AAW54745.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis RP62A]
gi|329734310|gb|EGG70625.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU045]
gi|329737388|gb|EGG73642.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU028]
Length = 344
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 109/346 (31%), Positives = 190/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAA+L+ DI+ +G +V GP + +PI T + ID +
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 178 LMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 237 VPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLLAPWD 295
Query: 300 VMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + IL L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 296 VIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHNY 341
>gi|55980570|ref|YP_143867.1| uroporphyrinogen decarboxylase [Thermus thermophilus HB8]
gi|81678593|sp|Q5SKP2|DCUP_THET8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|55771983|dbj|BAD70424.1| uroporphyrinogen decarboxylase (HemE) [Thermus thermophilus HB8]
Length = 341
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 185/346 (53%), Gaps = 11/346 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ IL +G PP+W MRQAGRY YR++R+++ ++ PE E+TL
Sbjct: 1 MDLVNDLILRAARGEPTPRPPVWFMRQAGRYQKAYRKLRERY-TLPEIVQNPEVCAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN 118
P++ DAAILF+DI +G ++ VEN+GP + +P+ ++ + L P +
Sbjct: 60 LPVKALGVDAAILFADITTPLYGMGVDLSLVENKGPVIHNPVRDEKGVEALRPLVPE--E 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I IL+++LP + LIGF GAP+T+ASY++ GG + + + Y ++
Sbjct: 118 AVPFVLETIRILKRELP--VPLIGFAGAPFTLASYLVEGGPSRRFLRVKALMYGEEALWH 175
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L++ A YL AQ AG D++Q+FD+ G L ++ Y + R+ ++R
Sbjct: 176 RLMEKLTEAMARYLRAQAEAGADLLQVFDSWVGALSPADYRRYVKPHMERLFQSLRPV-- 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G +L++ + + +GLD PL +A L PVQGNLDP L+
Sbjct: 234 GVPVIHFGVGTMGLLEDMKEAGG-DVLGLDHHTPLPWARALLGATPVQGNLDPAVLLAPK 292
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V IL G IFNLGHGI P+ +NV +V+ ++
Sbjct: 293 GVIRREVQRILKENGGKSGHIFNLGHGIVPETPEENVRYVVELIQE 338
>gi|238063533|ref|ZP_04608242.1| uroporphyrinogen decarboxylase [Micromonospora sp. ATCC 39149]
gi|237885344|gb|EEP74172.1| uroporphyrinogen decarboxylase [Micromonospora sp. ATCC 39149]
Length = 363
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 171/343 (49%), Gaps = 10/343 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ P+W MRQAGR LPEYR+IRK L+ C PE E+TLQP+RR
Sbjct: 23 SLFVRACWREPGAHAPVWFMRQAGRSLPEYREIRKNVG-MLESCRRPELVAEITLQPVRR 81
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAILFSDI+V A G + V GP + +P+ T I + + +
Sbjct: 82 HGVDAAILFSDIVVPVAAAGVELDIVAGTGPVVAEPVRTAADVERIRPI--TRDDVSCVD 139
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ +L +L LIGF GAP+T+ASY++ GG + H + + Y + ++ L L
Sbjct: 140 EAVRLLVAEL-GDTPLIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCARL 198
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++V+ +L Q+ AGV +Q+FD+ AG L E ++ Y R+++ + I
Sbjct: 199 AEVTLAFLRVQVDAGVSAVQLFDSWAGALSEADYRRYVLPHSARVLAGLADA--GVPRIH 256
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F G +L ++ +G+DW PL A + + VQGNLDP L V+
Sbjct: 257 FGVGTAELLPAMGE-AGADVVGVDWRTPLDVASRRIGADKAVQGNLDPCVLFAPWPVVEA 315
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL + P +FNLGHG+ P+ DP + +V V
Sbjct: 316 EVRRILAEGRATPGHVFNLGHGVLPETDPDVLTRVVALVHEVS 358
>gi|114556196|ref|XP_001154766.1| PREDICTED: uroporphyrinogen decarboxylase isoform 7 [Pan
troglodytes]
Length = 346
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 111/349 (31%), Positives = 169/349 (48%), Gaps = 30/349 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ ++ + ++ + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 173 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 232
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 233 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 291
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 292 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 340
>gi|320103648|ref|YP_004179239.1| uroporphyrinogen decarboxylase [Isosphaera pallida ATCC 43644]
gi|319750930|gb|ADV62690.1| uroporphyrinogen decarboxylase [Isosphaera pallida ATCC 43644]
Length = 360
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 120/343 (34%), Positives = 174/343 (50%), Gaps = 9/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L + + PIWLMRQAGRY+PEYR +R K FL++C PE ++T++
Sbjct: 20 RDAPFLRACRREPASVTPIWLMRQAGRYMPEYRAVRNKVG-FLELCKRPELACQVTVEAA 78
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILF+DIL+I + LG ++ F + EGP + +PI E + L
Sbjct: 79 EILGVDAAILFADILLILEPLGFDLEFAKGEGPVIHNPIRCPEDLQRVRPLSDHQP-LDY 137
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ ++R LP + LIGF GAP+T+A Y I GG ++ + F + A+ LLD
Sbjct: 138 VTKAVKLIRDTLPPRLPLIGFAGAPFTLACYAIEGGGSRNFETAKSFMRTHPEAWRTLLD 197
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D +A YL AQ+ AG D +Q+FD+ G L ++ ++ R+ +++
Sbjct: 198 RLADATAIYLNAQVAAGADALQLFDSWVGSLSPSDYVESVQPAMRRLFASLDAT---VPR 254
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVM 301
I F ML ++R IGLD VPL + E + VQGNLDP L +
Sbjct: 255 IHFGTDT-AMLLTHQRDAGGEVIGLDHRVPLDWGWERLGDQVAVQGNLDPTCLFAPIPEI 313
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL G P IFNLGHGI P +V LV V
Sbjct: 314 RRQADRILAEAGGRPGHIFNLGHGILPGTPVDHVKALVDYVHE 356
>gi|319401100|gb|EFV89319.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis FRI909]
Length = 344
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 108/346 (31%), Positives = 190/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAA+L+ DI+ +G +V GP + +PI T + ID +
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVEKLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 178 IMNHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 237 VPIILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADKMGVNKAIQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + IL L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 296 VIESRLKDILNQGLDRGKHIFNLGHGVFPEVKPETLRKVTEFVHNY 341
>gi|332977093|gb|EGK13897.1| uroporphyrinogen decarboxylase [Desmospora sp. 8437]
Length = 346
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 120/352 (34%), Positives = 189/352 (53%), Gaps = 17/352 (4%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M ++ L+ +G + P+W MRQAGRY PEYR+IR++ F +M PE E+
Sbjct: 1 MTKKSFNDTFLKACRGESVPYTPVWYMRQAGRYQPEYREIRQR-HTFFEMNEKPEVCAEV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY----LLNPNI 113
T P+ + DAAILF+DI+ +G +V+ GP + +P+ T LNP
Sbjct: 60 TRLPVEQLGVDAAILFADIMTPLKPVGVDVQIKSGVGPVISNPVRTPADVNRIGSLNPQR 119
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
D + + +SI +L + + LIGF GAP+T+ASY+I GG K++ Q + F Y
Sbjct: 120 D-----VPFVLESIHMLTSE-QLDVPLIGFAGAPFTLASYLIEGGPSKNYHQTKGFMYSQ 173
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
A+ L++ L+D++ YL AQI AG +Q+FD+ G L +++ Y A + RI S +
Sbjct: 174 PEAWEALMEKLADLTVTYLTAQISAGAHAVQVFDSWVGALNAADYQTYVAPVMHRIFSRL 233
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMR 293
+ + I F GAG++L+ + RL + IGLDW + A +L E +QGNLDP
Sbjct: 234 KEST-DVPLIYFGIGAGHLLREWNRLP-VDVIGLDWRTSIREARQLGIEKSLQGNLDPSL 291
Query: 294 LVVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L+ +++ ILD + + IFNLGHG P++ + + L + +
Sbjct: 292 LLAPWELIEKEAREILDQGMETPGHIFNLGHGTYPEIQVETLQRLTQFIHEY 343
>gi|156838526|ref|XP_001642967.1| hypothetical protein Kpol_1071p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113550|gb|EDO15109.1| hypothetical protein Kpol_1071p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 370
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 111/353 (31%), Positives = 181/353 (51%), Gaps = 17/353 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PP W+MRQAGRYLPEY + + ++F + C E E+T+QP+
Sbjct: 16 KNDLMLRAARGEAVERPPCWIMRQAGRYLPEYHEAKAG-RDFFETCRDAEVAAEITIQPV 74
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL--LNPNIDLFLN 118
RRY DAAI+FSDILVI A+G V +E +GP +P+ T E LN +D+ L
Sbjct: 75 RRYRGLLDAAIIFSDILVIPQAMGMKVELIEGKGPHFPEPLRTPEDVEKVLNYKVDV-LK 133
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L F++I++ R +L + L GFCG PWT+ YM GG + + + + +
Sbjct: 134 ELDWAFKAITLTRMQLQGEVPLFGFCGGPWTLLVYMSEGGGSRLFRFAKQWINEYPELSH 193
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 194 KLLQKITDVAIEFLAQQVVAGAQILQVFESWGGELSSADFDEFSLPYLKQIAEKVPKRLL 253
Query: 238 -----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
N FAKG+ Y L + + LDWS A+++ +QGNLDP
Sbjct: 254 ELGITENVPMTVFAKGSWYALDKLCS-SGYQTVSLDWSWDPEEAVKINNNRVTLQGNLDP 312
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ N+++ ++ G G +I N GHG P +D + + ++
Sbjct: 313 GAIYGTNEIITKKTEKMIKGFGGGKKNYIVNFGHGTHPFMDTEKIRFFLEECH 365
>gi|330886190|gb|EGH20091.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori str.
301020]
Length = 322
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 110/318 (34%), Positives = 170/318 (53%), Gaps = 5/318 (1%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
LP+ R R +F+ +C P++ E+TLQP+ RY DAAILFSDIL I DA+G + F
Sbjct: 1 LPKSRASRASAGDFMSLCKNPQFACEVTLQPLDRYPLDAAILFSDILTIPDAMGLGLYFE 60
Query: 92 ENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVA 151
EGPR + + I L + ++S +R++L + LIGF G+PWT+A
Sbjct: 61 TGEGPRFKKTVSTLADIEALPIPDAQKDLGYVMDAVSTIRRELNGRVPLIGFAGSPWTLA 120
Query: 152 SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG 211
+YM+ GG KD +++ Y N +A + LLD L+ YL QI AG +QIFD+ G
Sbjct: 121 TYMVEGGSSKDFRKSKAMLYDNPQAMHLLLDKLAQSVTSYLNGQILAGAQAVQIFDSWGG 180
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDW 269
L ++ ++ + +I++ + R++ I F KG G L++ + ++ +GLDW
Sbjct: 181 SLSSAAYQEFSLAYMRKIVNGLIREHDGRKVPVIVFTKGGGLWLESIADI-GADTLGLDW 239
Query: 270 SVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITP 327
+ + A + + +QGN+DP L + + V IL G+G +FNLGHGITP
Sbjct: 240 TCDIGEARQRVGSKVSLQGNMDPTVLYARPEAIRQEVARILASYGTGTGHVFNLGHGITP 299
Query: 328 QVDPKNVLDLVKTVRSEK 345
+VDP N + V
Sbjct: 300 EVDPANAGAFINAVHELS 317
>gi|166365870|ref|YP_001658143.1| uroporphyrinogen decarboxylase [Microcystis aeruginosa NIES-843]
gi|189083010|sp|B0JL12|DCUP_MICAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166088243|dbj|BAG02951.1| uroporphyrinogen decarboxylase [Microcystis aeruginosa NIES-843]
Length = 350
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 107/342 (31%), Positives = 184/342 (53%), Gaps = 8/342 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR++R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAAKGEILPRPPVWMMRQAGRYMQIYRELRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G +E++GP +D PI TQ ++ LNP + D L ++ I
Sbjct: 70 PDGVIMFSDILTPLAGIGIPFDIIESKGPIIDSPIRTQAQVDQLNPLDPDQSLPFIKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LD L
Sbjct: 130 KT---LRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V L+ A L K VQGN+DP L + +
Sbjct: 247 YISGSAGVLERMGK-SGVDIISVDWTVDLAEARQRLGKAMMVQGNIDPGVLFGSQSFIRE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + G+ I NLGHG+ NV +T +
Sbjct: 306 RIIDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAKQFS 347
>gi|194695764|gb|ACF81966.1| unknown [Zea mays]
Length = 394
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 98/344 (28%), Positives = 173/344 (50%), Gaps = 4/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++ ++G + PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQ
Sbjct: 50 TAEEPLLVSAIRGRKVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQ 109
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D ILFSDIL + V+ +GP + DP+ T + ++
Sbjct: 110 PWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREF-VPEEWV 168
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q+++ILR+++ N ++GF GAP+T+ASY + GG K+ + A+ + L
Sbjct: 169 PYVGQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNL 228
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + A Y+ Q G +QIFD+ A L +FE ++ + +I+ +VR +PN
Sbjct: 229 LQKFTTSMANYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPNL 288
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +A G+G +L+ LT + + LDW+V ++ L VQGN+DP L +
Sbjct: 289 PLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNTAVQGNVDPGVLFGSKE 347
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + G+ + NLGHGI +NV + +
Sbjct: 348 FISRRIYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKG 391
>gi|313683211|ref|YP_004060949.1| uroporphyrinogen decarboxylase [Sulfuricurvum kujiense DSM 16994]
gi|313156071|gb|ADR34749.1| uroporphyrinogen decarboxylase [Sulfuricurvum kujiense DSM 16994]
Length = 347
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 121/340 (35%), Positives = 188/340 (55%), Gaps = 8/340 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++RK+ NFL++C+ P+ E+T+QP+
Sbjct: 5 FVDACFGKETPYTPVWMMRQAGRYLPEYMEVRKRAGNFLNLCHAPDMAAEVTIQPLDIVG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ + +G + F++ EGP D PI ++E + + L ++ +
Sbjct: 65 VDAAILFSDILVVPNEMGMKLDFIKGEGPVFDKPIASEEDLNELIGGEEAASKLTYVYDT 124
Query: 127 ISILRKKLP---NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
I +LRK+L + LIGF GAPWT+A+YMI G K + + Y N + +L
Sbjct: 125 IKLLRKQLDERGDDKALIGFTGAPWTLATYMIEGQGTKTYNICKKMMYSNPDLLHKILHK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++V Y+ QI AG+DV+QIFD+ A + + ++ + I ++ KYP+ I
Sbjct: 185 VTEVVKLYMEKQIQAGIDVVQIFDSWAAAIEPSRYNEFSWSYMVEIADYLKAKYPHIPII 244
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KG L + + + G+DWS P++ A E L +QGN++P RL +
Sbjct: 245 MFPKGIPAFLD--QVYGNFDVFGVDWSTPMALAKEKLGDRYVLQGNMEPCRLY-SKEQTT 301
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V AI +++G IFNLGHGI P V +N V+ +
Sbjct: 302 ACVEAIQNIMGGKRHIFNLGHGILPDVPVENAQHFVRECQ 341
>gi|317012419|gb|ADU83027.1| uroporphyrinogen decarboxylase [Helicobacter pylori Lithuania75]
Length = 339
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 123/339 (36%), Positives = 187/339 (55%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ I PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKEIPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ FV +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFVPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y + LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPKVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|261839567|gb|ACX99332.1| uroporphyrinogen decarboxylase [Helicobacter pylori 52]
Length = 339
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWIMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKSALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|217033551|ref|ZP_03438980.1| hypothetical protein HP9810_905g70 [Helicobacter pylori 98-10]
gi|216944076|gb|EEC23507.1| hypothetical protein HP9810_905g70 [Helicobacter pylori 98-10]
Length = 339
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 120/338 (35%), Positives = 181/338 (53%), Gaps = 5/338 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G N+ FV +GP T + + L ++ +I
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFVPKKGPHFLETITG-LKSVESLKVGAYKQLNYVYDTI 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 122 SQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSFE 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F K
Sbjct: 182 LIEYLSLQIQAGVNAVMIFDSWASTLEKEAYLEFSWDYLKKISKELKKRYAHIPVILFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVN 306
G G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 242 GIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKSALEEGVE 298
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 KILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|308063605|gb|ADO05492.1| uroporphyrinogen decarboxylase [Helicobacter pylori Sat464]
Length = 339
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ R+K +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRQKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|71274865|ref|ZP_00651153.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Dixon]
gi|71901226|ref|ZP_00683327.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|170729884|ref|YP_001775317.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M12]
gi|238058178|sp|B0U6C5|DCUP_XYLFM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71164597|gb|EAO14311.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Dixon]
gi|71729001|gb|EAO31131.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|167964677|gb|ACA11687.1| Uroporphyrinogen decarboxylase [Xylella fastidiosa M12]
Length = 354
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 126/348 (36%), Positives = 189/348 (54%), Gaps = 10/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ + + L +
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + A+ + LL+
Sbjct: 123 MDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGGSKEYAHIKAMAFNAPDVLHQLLNT 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
++D YL AQ AG +Q+FDT G L + ++ + RI + R +
Sbjct: 183 VTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTEHTP 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
+ F KG G + ++ + A+G+DW++ L A + +QGNLDP L
Sbjct: 243 LVLFGKGNGPYIAELA-MSGTEAVGVDWTIELEDAARRSNGQVALQGNLDPATLYGTPNN 301
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP +DP +V LV+ V+
Sbjct: 302 IAREVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMDPDHVSALVEAVQ 349
>gi|317010827|gb|ADU84574.1| uroporphyrinogen decarboxylase [Helicobacter pylori SouthAfrica7]
Length = 339
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCQNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQARQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++YP+ I F
Sbjct: 181 ELMEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYPHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|8928548|sp|O25325|DCUP_HELPY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 339
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSREKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ETILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|15645229|ref|NP_207399.1| uroporphyrinogen decarboxylase [Helicobacter pylori 26695]
gi|2313724|gb|AAD07669.1| uroporphyrinogen decarboxylase (hemE) [Helicobacter pylori 26695]
Length = 340
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 4 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 64 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 122 ISQTRQKLSREKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 182 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 242 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 ETILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|299537562|ref|ZP_07050855.1| uroporphyrinogen decarboxylase [Lysinibacillus fusiformis ZC1]
gi|298726931|gb|EFI67513.1| uroporphyrinogen decarboxylase [Lysinibacillus fusiformis ZC1]
Length = 349
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 111/347 (31%), Positives = 180/347 (51%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G I P+W MRQAGR PEYR I++K+ + ++ + PE +T
Sbjct: 1 MTTFNDTLLRAARGERIAHTPVWYMRQAGRSQPEYRAIKEKY-SLEEITHQPELCAYVTR 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + + +
Sbjct: 60 LPVENYNVDAAILYKDIVTPLPGIGIDVKIKAGVGPVISNPIRSVADVEKLGEFNAK-EH 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++I +L ++ ++ LIGF GAP+T+ASYMI GG +++ + + F +A+
Sbjct: 119 TPFVLETIKLLAEE-QLNVPLIGFAGAPFTLASYMIEGGPSRNYNKTKSFMVSEPQAWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+D+ + AQI AG IQ+FD+ G L ++ + + RI + ++++ N
Sbjct: 178 LMDKLADMIIADVTAQIKAGAKAIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE--N 235
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 236 VPLIQFGVGASHLVKEWNDLP-IDVVGLDWRLPIKDARANGITKPVQGNLDPSLLLADWS 294
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I+D L IFNLGHG+ P+VDP + L +
Sbjct: 295 VIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDPDVLKRLTTLIHEYS 341
>gi|159030620|emb|CAO88288.1| hemE [Microcystis aeruginosa PCC 7806]
Length = 350
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 106/342 (30%), Positives = 184/342 (53%), Gaps = 8/342 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L +G ++ PP+W+MRQAGRY+ YR++R K+ +F + + +E++LQP R +
Sbjct: 10 LLRAAKGEILPRPPVWMMRQAGRYMQIYRELRDKYPSFRERSENADLAIEISLQPWRAFQ 69
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNP-NIDLFLNYLLPIF 124
D I+FSDIL +G +E++GP +D PI TQ ++ LNP + D L ++ I
Sbjct: 70 PDGVIMFSDILTPLAGIGIPFDIIESKGPIIDSPIRTQAQVDQLNPLDPDQSLPFIKTIL 129
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ LR+++ N T++GF GAPWT+A+Y + G K + + A+ + LD L
Sbjct: 130 KT---LRQEVGNKSTVLGFVGAPWTLAAYAVEGKGSKSYSVIKGMAFSEPSVLHQFLDKL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+ A Y+ QI G V+Q+FD+ AG L +++ +A +++ V+ +P+ I
Sbjct: 187 ADMIATYVRYQIDCGAQVVQMFDSWAGQLTPQDYDVFALPYQQKVVRLVKETHPDTPLIL 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
+ G+ +L+ + + + I +DW+V ++ A L K VQGN+DP L + +
Sbjct: 247 YISGSAGVLERMGK-SGVDIISVDWTVDMAEARQRLGKAMMVQGNIDPGVLFGSQSFIRE 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + G+ I NLGHG+ NV +T +
Sbjct: 306 RIIDTIRKAGNQGHILNLGHGVLVGTPEDNVRFFFETAKQFS 347
>gi|328773206|gb|EGF83243.1| hypothetical protein BATDEDRAFT_84792 [Batrachochytrium
dendrobatidis JAM81]
Length = 393
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 112/354 (31%), Positives = 192/354 (54%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL V +G + P+W+MRQAGRYLPE+RQ R++ +F +C +PE E+TLQPI
Sbjct: 29 KNDLILRVARGESVERVPVWIMRQAGRYLPEFRQARER-NDFFTICRSPELACEVTLQPI 87
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNIDLFLNY 119
RY+ DA+I+F DILV+ ALG V+ + +GP + + L +++ +
Sbjct: 88 DRYDGLLDASIIFCDILVVPQALGLEVQMLPKQGPHFPAPLVDPTHMSRLVEKVNVDRD- 146
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++++I++ RKKL + L GF GAPWT+ +YMI GG K + + + Y+ + +
Sbjct: 147 LGYVYEAITLTRKKLDGRVPLFGFAGAPWTLMAYMIEGGGSKTLNKAKTWLYKYPKESHA 206
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL +DV EYL+ Q +G ++Q+FD+ AG L +FE ++ + +++ V++ +
Sbjct: 207 LLQRTTDVIVEYLVGQAKSGAQLLQVFDSWAGMLSPSQFELFSLPYLKQVVERVKKSLAD 266
Query: 240 ------AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPM 292
FA GA + L+ L + + +DW++ + L + +QGN DP
Sbjct: 267 LPTPLNPPISVFALGAHHALEKLATL-GYDIVQVDWTMDPTSVRSRLGDKVTLQGNADPS 325
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V ++D G+ I NLGHG+ P DP+++ ++ ++
Sbjct: 326 LLYGDRETIRIAVKKMMDGFGTRSHYIANLGHGMYPDHDPEHLKWYLEAIKEFS 379
>gi|159900063|ref|YP_001546310.1| uroporphyrinogen decarboxylase [Herpetosiphon aurantiacus ATCC
23779]
gi|159893102|gb|ABX06182.1| uroporphyrinogen decarboxylase [Herpetosiphon aurantiacus ATCC
23779]
Length = 340
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 122/342 (35%), Positives = 186/342 (54%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ P+W MRQAGR LPEYR IR+++ F+D+CY PE E+TLQP+R
Sbjct: 2 QDRFLRACRREAVDATPVWFMRQAGRALPEYRAIREQYG-FMDICYQPELCAEVTLQPVR 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R DAAI+F+DI+ A G V VE+ GP + +PI T I+ ++ + I
Sbjct: 61 RLGVDAAIMFADIMTPLIATGVGVDLVESIGPVVANPIRTMADVSRIRPIEPEVD-VPYI 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+SI +L+ +L LIGF GAP+T+A+Y++ G K+ + Y + +N L++
Sbjct: 120 SKSIHLLKAEL-GQTPLIGFAGAPFTLAAYLVEGKGSKNFLNTKALMYGSPNVWNALMER 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL +I AGVD +Q+FD+ GCL H++ + RI+ +R + N I
Sbjct: 179 LADLTISYLRVKIAAGVDALQLFDSWVGCLSPHDYATFVQPYTARILKTLREET-NIPLI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMI 302
F +L R S +G DW +P+ A EL + +QGNLDP L+ + +
Sbjct: 238 HFGTNTTNLLPLMRNDGGS-VLGADWRIPIDEAWELIGDDKAIQGNLDPAVLLGPWEYVR 296
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL + P IFNLGHGI PQ N+ LV +
Sbjct: 297 EQAADILRRVNRRPGHIFNLGHGIHPQTPVANLERLVAFIHE 338
>gi|330919208|ref|XP_003298518.1| hypothetical protein PTT_09266 [Pyrenophora teres f. teres 0-1]
gi|311328244|gb|EFQ93395.1| hypothetical protein PTT_09266 [Pyrenophora teres f. teres 0-1]
Length = 365
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 126/354 (35%), Positives = 187/354 (52%), Gaps = 17/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY + + K +F + C +PE LTLQPI
Sbjct: 9 KNDLILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-HDFFECCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ T + ++ ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPEPLQTPDDKQYKEVLEREVDVA 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 128 ESLDYVYKAITMTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPEET 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+ +A + I + +
Sbjct: 188 KALLKKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTCFKTFALPYLNHIADNLPARI 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
FAKGA Y L + T+ N IGLDW + A ++ K +QGN D
Sbjct: 248 KSKGLEPVPMTVFAKGAWYALSDLCD-TNYNTIGLDWLHAPAEAYKVAQAKGKVLQGNAD 306
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHGITP V P ++ + +
Sbjct: 307 PGVLYGTRESITKVVEEMVAGFGGGKQGWIANLGHGITPFVKPDDLKFYFEEIH 360
>gi|291301399|ref|YP_003512677.1| uroporphyrinogen decarboxylase [Stackebrandtia nassauensis DSM
44728]
gi|290570619|gb|ADD43584.1| uroporphyrinogen decarboxylase [Stackebrandtia nassauensis DSM
44728]
Length = 345
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGR LPEYR +R L C TP+ E+T+QP+
Sbjct: 7 SQSPFLRACRGEETPRTPVWFMRQAGRSLPEYRALRADTP-MLTACRTPDMIREITMQPV 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI FSDI+V A+G +V V GP + PI ++ + DL +
Sbjct: 66 RRHGVDAAIFFSDIVVPLAAVGVDVDIVAGTGPVVGQPIR--DMAGVEALRDLTPEDVPY 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I +++ +LR++L LIGF GAP+T+ASY++ GG + + + + + ++ L
Sbjct: 124 ITEAVGMLREEL-GATPLIGFAGAPFTLASYLVEGGPSRTYAKTKALMHGAPDVWHALCG 182
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ ++A +L QI AG + +Q+FD+ AG L ++ + A ++SAV R P
Sbjct: 183 RLAGITASFLKVQIDAGANAVQLFDSWAGALSAADYGMFVAPHSAAVLSAVAR--PGVPR 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F GAG++L + ++ +G+DW +PL+ A L + +QGNLDP L V+
Sbjct: 241 IHFGVGAGHLLAAMGEV-GADVVGVDWRIPLTEAAGLVGDRALQGNLDPTTLFAPEDVLA 299
Query: 303 DGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L + IFNLGHG+ P+ D + V+ V
Sbjct: 300 HEVRRVLAEGKAAKGHIFNLGHGVLPETDADALTKTVEYVHRFS 343
>gi|62260530|gb|AAX77913.1| unknown protein [synthetic construct]
Length = 379
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 120/350 (34%), Positives = 195/350 (55%), Gaps = 9/350 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L
Sbjct: 24 MLEMRKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVAL 83
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P++RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ +
Sbjct: 84 HPLQRYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGS 143
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + +
Sbjct: 144 LDYVYNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHS 201
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N
Sbjct: 202 LLQRLADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-N 260
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGN 298
+ F KG + + + + +G+DWSV L A + +QGN DP L
Sbjct: 261 IPIVFFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSK 319
Query: 299 QVMIDGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
Q + + V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 320 QSIRETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 369
>gi|22298283|ref|NP_681530.1| uroporphyrinogen decarboxylase [Thermosynechococcus elongatus BP-1]
gi|29611755|sp|Q8DKW0|DCUP_THEEB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|22294462|dbj|BAC08292.1| uroporphyrinogen decarboxylase [Thermosynechococcus elongatus BP-1]
Length = 343
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 184/347 (53%), Gaps = 10/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G + PPIWLMRQAGRY+ YR +R ++ +F PE +E++L
Sbjct: 1 MTT--PLLLRAARGESVERPPIWLMRQAGRYMKVYRDLRDRYPSFRQRSEIPELAIEISL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQE-IYLLNP-NIDLFL 117
QP R + D ILFSDIL +G VE++GP +DP I T E + L+P +
Sbjct: 59 QPFRAFAPDGVILFSDILTPLPGIGIPFDIVESKGPIIDPPIRTLEQVQHLHPLEPEAAC 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
++ PI ++ LR+++ + ++GF GAPWT+A+Y I G KD+ Q + AY+
Sbjct: 119 PFIRPI---LATLRQEVGDRAAVLGFAGAPWTLAAYAIEGKSSKDYIQIKTMAYREPDLL 175
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L+ L+ A+YL QI G V+Q+FD+ AG L +++ +A ++I V+ Y
Sbjct: 176 HKFLNHLATAIADYLCYQIDCGAQVVQLFDSWAGQLSRQDYDTFAFPYQKQVIQQVKAVY 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
P+ I + G+ ++ T + + LDW+V L + +QGNLDP+ L
Sbjct: 236 PDVPIILYINGSAAIVDRMAA-TGVDIVSLDWTVDLGTIRQQFPPSVGLQGNLDPVILFA 294
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + AI++ G +IFNLGHG+ +NV L V+S
Sbjct: 295 PQPVLKERSLAIIEAGRKGKYIFNLGHGVLQGTPEENVAFLFDWVKS 341
>gi|182435266|ref|YP_001822985.1| uroporphyrinogen decarboxylase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775905|ref|ZP_08235170.1| Uroporphyrinogen decarboxylase [Streptomyces cf. griseus XylebKG-1]
gi|254767708|sp|B1VWH6|DCUP_STRGG RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|178463782|dbj|BAG18302.1| putative uroporphyrinogen decarboxylase [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326656238|gb|EGE41084.1| Uroporphyrinogen decarboxylase [Streptomyces cf. griseus XylebKG-1]
Length = 365
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
L + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQ
Sbjct: 24 ATHDSAFLRACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVAEITLQ 82
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ GP + +PI T+ L DL +
Sbjct: 83 PVRRHKVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVIAEPIRTRAD--LARLRDLTPEDV 140
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I +L +L LIGF GAP+T+ASY++ GG ++H + + Y + + + L
Sbjct: 141 PYVTEAIGMLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPQLWADL 199
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L++++ +L QI AG +Q+FD+ G L ++ + ++ AV
Sbjct: 200 VDRLAEITGAFLKVQIEAGASAVQLFDSWVGALAPADYRRAVLPASAKVFDAVAPY--GV 257
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VPL A + +QGNLDP L
Sbjct: 258 PRIHFGVGTGELLGLMGE-AGADVVGVDWRVPLNEAARRVGPGKALQGNLDPAVLFAPTP 316
Query: 300 VMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + +LD IFNLGHG+ P +DP + LV V +
Sbjct: 317 AVEEKTREVLDAAAGLEGHIFNLGHGVMPNMDPDALTRLVGYVHEQ 362
>gi|291436574|ref|ZP_06575964.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
gi|291339469|gb|EFE66425.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
Length = 356
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 114/342 (33%), Positives = 175/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+R
Sbjct: 18 DSPFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIG-MLDSCMRPELVAEITLQPVR 76
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP ++ P+ T+ L DL + +
Sbjct: 77 RHRVDAAIFFSDIVVPLKAIGIDLDIKPGIGPVVEQPVRTRAD--LARLRDLTPEDVSYV 134
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 135 TEAIGLLLPEL-GSTPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDR 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++A +L QI AGV +Q+FD+ AG L ++ + ++ V I
Sbjct: 194 LADITAAFLKVQIEAGVSAVQLFDSWAGALAPADYRRSVLSASAKVFREVADH--GVPRI 251
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 252 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPTVLFAGREAVE 310
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L+ G IFNLGHG+ P + + LV+ V +
Sbjct: 311 AKAQEVLESAAGLEGHIFNLGHGVMPSTEADALTHLVEYVHT 352
>gi|314933998|ref|ZP_07841363.1| uroporphyrinogen decarboxylase [Staphylococcus caprae C87]
gi|313654148|gb|EFS17905.1| uroporphyrinogen decarboxylase [Staphylococcus caprae C87]
Length = 344
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 193/346 (55%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MHSNNDTILKTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAA+L+ DI+ +G +V GP + +PI + + ID +
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIKSVQDVEKLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLETIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYGDEPTWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L DVS +Y++AQI AG ++IQIFD+ G L ++ Y ++ +++S ++ Y +
Sbjct: 178 LMDHLVDVSIKYVVAQIEAGAELIQIFDSWVGALNVQDYNYYIKPAMKKLVSGIKAHY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW ++ A ++ +QGNLDP L+
Sbjct: 237 VPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQADQMGVNKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + ILD + G IFNLGHG+ P+V P+ + + K V +
Sbjct: 296 VIESRLKDILDQGMARGKHIFNLGHGVFPEVQPETLRKVSKFVHNY 341
>gi|68477717|ref|XP_717171.1| hypothetical protein CaO19.5369 [Candida albicans SC5314]
gi|68477880|ref|XP_717092.1| hypothetical protein CaO19.12829 [Candida albicans SC5314]
gi|46438790|gb|EAK98116.1| hypothetical protein CaO19.12829 [Candida albicans SC5314]
gi|46438872|gb|EAK98197.1| hypothetical protein CaO19.5369 [Candida albicans SC5314]
Length = 361
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY +++ ++F + C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPIWIMRQAGRYLPEYHKVK-GNRDFFETCQDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G + VE +GP P+ T + L
Sbjct: 67 DHFDGLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFAAPLRTPDDLSRIDLKPDVNTKL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + L
Sbjct: 127 AWAYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L D E+L Q+ AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 187 LQATCDACVEFLAQQVVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKEL 246
Query: 240 -----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
FAKGA Y L + + + + LDW A+++ + +QGNLDP
Sbjct: 247 GVEEYIPMTVFAKGAWYALDDLCD-SGYDCVSLDWLYDPKNAVKVVNGRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V +L+ G +I N GHG P +DPK + ++
Sbjct: 306 VMYGSDKVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKIEFFLQQCH 355
>gi|256375688|ref|YP_003099348.1| uroporphyrinogen decarboxylase [Actinosynnema mirum DSM 43827]
gi|255919991|gb|ACU35502.1| uroporphyrinogen decarboxylase [Actinosynnema mirum DSM 43827]
Length = 350
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 117/355 (32%), Positives = 189/355 (53%), Gaps = 19/355 (5%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + +L +G + P+W MRQAGR LPEYR +R LD C+ PE E+T
Sbjct: 5 MTEMTEPPLLVAARGGTPSRTPVWFMRQAGRSLPEYRALRAGTA-MLDACFDPEMVCEIT 63
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RR++ D AILFSDI+V A G ++ V GP + P+ T++ P ++
Sbjct: 64 MQPVRRHDVDGAILFSDIVVPLKAAGVDLDIVAGTGPVVASPVRTRDDVAALPELEAA-- 121
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
++ P+ +I +L K+L ++ LIGF GAP+T+ASY++ GG ++H + + + + ++
Sbjct: 122 HVRPVADAIGLLLKEL-GNVPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPDLWH 180
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++D++AE+L Q+ AGV +Q+FD+ AG L E ++ + R++ ++
Sbjct: 181 ALLAKIADITAEFLRVQVEAGVKAVQLFDSWAGALSERDYRTFVLPHSTRVLESIT---- 236
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-------QKEGPVQGNLDP 291
I F G +L R ++ +G+DW PL A+ VQGNLDP
Sbjct: 237 GVPRIHFGVGTTELLPAMRE-AGADVVGVDWRTPLDVAVRRMVQAAPDLPPPVVQGNLDP 295
Query: 292 MRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L G + V+ I++ + IFNLGHG+ P DP + V+ V +
Sbjct: 296 ALLFAGIPALEREVDRIVEEGKVASGHIFNLGHGVLPDTDPDVITKAVELVHRSR 350
>gi|16323119|gb|AAL15294.1| AT3g14930/K15M2_7 [Arabidopsis thaliana]
Length = 418
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +++ +G I+ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQ
Sbjct: 56 SSSDPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQ 115
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D I+FSDIL A G E +GP + PI T+E ID L
Sbjct: 116 PWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPID--FEKL 173
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ S+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + L
Sbjct: 174 QFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRAL 233
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+
Sbjct: 234 LSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDT 293
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
+ + G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L
Sbjct: 294 PIVFYINGNGGLLERM-KGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLP 352
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + ++ G I NLGHG+ + V +T R+
Sbjct: 353 ALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|145341574|ref|XP_001415881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576104|gb|ABO94173.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 106/342 (30%), Positives = 173/342 (50%), Gaps = 3/342 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +L +G + PP+WLMRQAGRY+ E+R K+ F TPE +EL++QP
Sbjct: 16 NQDPILLRAARGEDVERPPVWLMRQAGRYMAEFRAYSTKYG-FRHRSETPEIAIELSMQP 74
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
R + D I+FSDIL ALG V+ +GP + P+ T + +D + L
Sbjct: 75 WRAFKPDGVIMFSDILTPLPALGIEFDVVKGKGPVVTPVRTMDDVKAMKQLDDPDSQLPF 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + +S LRK++ T++GF G+PWT+A+Y + G + + Q+ + L
Sbjct: 135 VREILSTLRKEIEGQSTMLGFIGSPWTLAAYAMEGSSDRHLVTTKQIMTQDPETLHAFLS 194
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D Y+ QI +G V+QIFD+ A L ++ ++ R+I+ V+++YP+
Sbjct: 195 KLADALGVYVCHQIDSGAQVVQIFDSWAHHLSPQQYLEFSHPYNERVIAYVKQRYPDTPL 254
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I A G L ++ T ++ IGLDW+ +S A + + +QGN+DPM L + +
Sbjct: 255 IFHANGGCGKLHELKKST-ADVIGLDWNTSMSEARAVLGPDRVLQGNMDPMYLFASPERI 313
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + GS I N+GHG+ +NV R+
Sbjct: 314 RQEVANNVRDAGSRKHILNVGHGVVQGTPEENVGHFCDAARA 355
>gi|295835902|ref|ZP_06822835.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB74]
gi|295825769|gb|EFG64469.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB74]
Length = 352
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 112/348 (32%), Positives = 179/348 (51%), Gaps = 12/348 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ R L+ + + P+W MRQAGR LPEY + R+ L+ C PE E+T+Q
Sbjct: 11 SPRDSVFLKACRREPVPYTPVWFMRQAGRSLPEYLKAREGIP-MLESCARPELVAEITMQ 69
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNY 119
P+RR+ DAA+ +SDI+V A+G ++ GP + DPI T+ ++ L P + ++Y
Sbjct: 70 PVRRHEVDAAVYYSDIVVPLKAIGVDLDIKPGVGPVIADPIRTEADLARLRPLVPEDVSY 129
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ +++ +L +L LIGF GAP+T+ASY++ GG ++H + + Y +
Sbjct: 130 ---VTEAVGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGRPELWAR 185
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D++ +L QI AG +Q+FD+ G L ++ Y + ++ +AV
Sbjct: 186 LLDRLADITTGFLEVQIEAGASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--G 243
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
+ F G G +L + ++ +G+DW VPL A + +QGNLDP L
Sbjct: 244 VPRVHFGVGTGELLHDLGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFADE 302
Query: 299 QVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +LD IFNLGHG+ P DP + DLV V
Sbjct: 303 AAIREKTTEVLDAARGLEGHIFNLGHGVLPTTDPGVLTDLVADVHERS 350
>gi|238883927|gb|EEQ47565.1| uroporphyrinogen decarboxylase [Candida albicans WO-1]
Length = 361
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY +++ ++F + C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPIWIMRQAGRYLPEYHKVK-GNRDFFETCQDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G + VE +GP P+ T + L
Sbjct: 67 DHFDGLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFAAPLRTPDDLSRIDLKPDVKTKL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + L
Sbjct: 127 AWAYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L D E+L Q+ AG ++QIF++ AG LG +F ++ + +I + + +
Sbjct: 187 LQATCDACVEFLAQQVVAGAQMVQIFESWAGELGPDDFNEFSLPYLKQIAAKLPPRLKEL 246
Query: 240 -----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
FAKGA Y L + + + + LDW A+++ + +QGNLDP
Sbjct: 247 GVEEYIPMTVFAKGAWYALDDLCD-SGYDCVSLDWLYDPKNAVKVVNGRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V +L+ G +I N GHG P +DPK + ++
Sbjct: 306 VMYGSDKVIAKKVKTMLEGFGKQNYIINFGHGTHPFMDPKKIEFFLQQCH 355
>gi|18400577|ref|NP_566495.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|30683381|ref|NP_850587.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|238064978|sp|Q93ZB6|DCUP1_ARATH RecName: Full=Uroporphyrinogen decarboxylase 1, chloroplastic;
Short=UPD1; Short=URO-D1; Flags: Precursor
gi|332642068|gb|AEE75589.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
gi|332642069|gb|AEE75590.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
Length = 418
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +++ +G I+ PP W+MRQAGRY+ Y+++ KK +F + + VE++LQ
Sbjct: 56 SSSDPLLVKAAKGQAISRPPAWMMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQ 115
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P + + D I+FSDIL A G E +GP + PI T+E ID L
Sbjct: 116 PWQAFRPDGVIIFSDILTPLPAFGVPFDIEEVKGPVIQSPIRTEEDMKRLHPID--FEKL 173
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ S+ ILR+++ H ++GF GAPWT+A+Y++ GG + + + + L
Sbjct: 174 QFVGDSLKILRREVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRAL 233
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+ EY++ Q+ G IQIFD+ G L +E ++ + II AV+++ P+
Sbjct: 234 LSHLTKAITEYVVYQVEHGAHCIQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDT 293
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
+ + G G +L+ + T ++ IGLDW+V ++ L E VQGN+DP L
Sbjct: 294 PIVFYINGNGGLLERM-KGTGADVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLP 352
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + ++ G I NLGHG+ + V +T R+
Sbjct: 353 ALTEEIERVVKCAGPKGHILNLGHGVLVGTPEEAVAHFFETARN 396
>gi|317181919|dbj|BAJ59703.1| uroporphyrinogen decarboxylase [Helicobacter pylori F57]
Length = 339
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSKPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|164427732|ref|XP_964266.2| uroporphyrinogen decarboxylase [Neurospora crassa OR74A]
gi|157071862|gb|EAA35030.2| uroporphyrinogen decarboxylase [Neurospora crassa OR74A]
Length = 369
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 117/357 (32%), Positives = 186/357 (52%), Gaps = 21/357 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F ++C PE LTLQPI
Sbjct: 9 KNDLLLRAARGETVERPPIWVMRQAGRYLPEYHEAKGG-RDFFEVCRNPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V V+ +GP +P+ + L+ ++D+
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPNPLRSPSDGQYAELMKRDVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ RKKL + L GF GAPWT+ YM+ GG K + + + Y+
Sbjct: 128 -KELDYVYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKEVKTWIYKYPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + +
Sbjct: 187 TKALLQKISELCVEYLALQVKAGAQIVQVFDSWAGELSPSSFKTFSQPYLTYIAKHLPLR 246
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNL 289
+ F KGA Y L + N +GLDW + A+++ + P +QGN
Sbjct: 247 LKEMGLEPVPMVVFPKGAWYALDAACDM-GYNVVGLDWLHDPAEAVKVVGDRPMVLQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L ++ + V ++ +I NLGHGITP V+P ++ + +
Sbjct: 306 DPGVLYGSHEAITKVVEEMVQGFDWHGRHKGWIVNLGHGITPFVNPDDLKFFFEEIH 362
>gi|28198490|ref|NP_778804.1| uroporphyrinogen decarboxylase [Xylella fastidiosa Temecula1]
gi|182681167|ref|YP_001829327.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M23]
gi|32129491|sp|Q87DV0|DCUP_XYLFT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058177|sp|B2I9F9|DCUP_XYLF2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28056574|gb|AAO28453.1| uroporphyrinogen decarboxylase [Xylella fastidiosa Temecula1]
gi|182631277|gb|ACB92053.1| uroporphyrinogen decarboxylase [Xylella fastidiosa M23]
gi|307579614|gb|ADN63583.1| uroporphyrinogen decarboxylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 354
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 10/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ + + L +
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + + A+ + LL+
Sbjct: 123 MDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDVLHQLLNT 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
++D YL AQ AG +Q+FDT G L + ++ + RI + R +
Sbjct: 183 VTDAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTEHTP 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
+ F KG G + ++ + A+G+DW++ L A + +QGNLDP L
Sbjct: 243 LVLFGKGNGPYIAELA-MSGTEAVGVDWTIELEDAARRSNGQVALQGNLDPATLYGTPNN 301
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP ++P +V LV+ V+
Sbjct: 302 IAREVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMNPDHVSALVEAVQ 349
>gi|296139601|ref|YP_003646844.1| uroporphyrinogen decarboxylase [Tsukamurella paurometabola DSM
20162]
gi|296027735|gb|ADG78505.1| uroporphyrinogen decarboxylase [Tsukamurella paurometabola DSM
20162]
Length = 357
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 183/345 (53%), Gaps = 12/345 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L G P+W MRQAGR LPEYR++R+ L C+ PE E+TLQP+RR+
Sbjct: 16 PLLAAAAGQPPARRPVWFMRQAGRSLPEYRKVREGVG-MLQSCFMPELVSEITLQPVRRH 74
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDI+V A G ++ V GP ++ P+ P++D + P+ +
Sbjct: 75 RTDAAILFSDIVVPLKAAGIDLDIVSGIGPVIEQPVRDAAAVAAMPSLDA--EQVEPVAE 132
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +LR +LP+ + LIGF GAP+T+ASY++ GG ++H + + Y + ++ LLD L+
Sbjct: 133 AVRMLRTELPDGVALIGFAGAPFTLASYLVEGGPSRNHERTKALMYTDPTTWHALLDQLA 192
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ +L Q +AGV Q+FD+ AG L ++ Y R+ +A+R F
Sbjct: 193 DIAITFLSVQANAGVQAFQLFDSWAGALSLADYREYVLPHSARVFAALRETGTALPGFHF 252
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L ++ +G+DW VPL A + +QGNLDP L +++
Sbjct: 253 GVGTGELLGAMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAALASSWEMVEAQ 311
Query: 305 VNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + + +FNLGHG+ P DP+ + +V+ V S
Sbjct: 312 VRRVCADADAAVAAGATGHVFNLGHGVLPSTDPEVLTRVVELVHS 356
>gi|126649417|ref|ZP_01721658.1| uroporphyrinogen decarboxylase [Bacillus sp. B14905]
gi|126593742|gb|EAZ87665.1| uroporphyrinogen decarboxylase [Bacillus sp. B14905]
Length = 362
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 112/347 (32%), Positives = 179/347 (51%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G P+W MRQAGR EYR I++K+ + ++ + PE +T
Sbjct: 14 MTTFNDTLLRAARGEKTTHTPVWYMRQAGRSQAEYRAIKEKY-SLEEITHQPELCAYVTR 72
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + + +
Sbjct: 73 LPVENYNVDAAILYKDIVTPLPGIGVDVKIKAGVGPVISNPIRSVADVDNLGEFNAK-EH 131
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++I IL ++ ++ LIGF GAP+T+ASYMI GG K++ + + F +A+
Sbjct: 132 TPFVLETIKILTEE-QLNVPLIGFAGAPFTLASYMIEGGPSKNYNKTKSFMVSEPQAWFA 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+D+ + AQI AG VIQ+FD+ G L ++ + + RI + ++++ N
Sbjct: 191 LMDKLADMIIADVTAQIKAGAKVIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE--N 248
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 249 VPLIQFGVGASHLAKEWNDLP-IDVVGLDWRLPIKEARANGITKPVQGNLDPSLLLADWS 307
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I+D L IFNLGHG+ P+VDP+ + L +
Sbjct: 308 VIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDPEVLKRLTTLIHEYS 354
>gi|206889921|ref|YP_002248647.1| uroporphyrinogen decarboxylase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|226696382|sp|B5YK82|DCUP_THEYD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|206741859|gb|ACI20916.1| uroporphyrinogen decarboxylase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 338
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 196/343 (57%), Gaps = 12/343 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+ L+ +G + P+W MRQAGRY+PEY+++R+K+ +FL MC TPE E+TLQP++
Sbjct: 2 KEAFLKACRGIRTDYTPVWFMRQAGRYMPEYQKLRQKY-DFLTMCKTPEIAAEVTLQPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL+ +A+G + F++++GP++ P I T + +L L + +
Sbjct: 61 VLGVDAAILFSDILIPLEAMGLKIEFIDDKGPQVLPNIRTVADLEIL--GELNLEKIGFV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F +I IL +L ++ LIGF +P+T+A+Y+I GG K+ + F + F+ L+
Sbjct: 119 FDAIRILINEL--NVPLIGFAASPFTLATYVIEGGSTKEFVNTKRFMFLEPEGFHKLMSL 176
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ + +YL QI AGV +QIFDT AG L ++E++ V R+I +++ I
Sbjct: 177 FTKATQKYLNEQIRAGVHAVQIFDTWAGILSPFDYESFVKPYVKRLIESLK----TVPVI 232
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F+ ++ + + L +++ + +DW + + A +L K P+QGNLDP+ L+ ++ +
Sbjct: 233 YFSSNTAGLINHLKEL-NADVLSIDWRIDIKDATDLLKNKPLQGNLDPLTLLGSDEELFK 291
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L G+ IFNLGHG+ + LV V K
Sbjct: 292 RVEKVLIGARGAKSHIFNLGHGVNINTSVDKLKKLVDFVHEFK 334
>gi|70726129|ref|YP_253043.1| uroporphyrinogen decarboxylase [Staphylococcus haemolyticus
JCSC1435]
gi|123660534|sp|Q4L7D8|DCUP_STAHJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|68446853|dbj|BAE04437.1| uroporphyrinogen decarboxylase [Staphylococcus haemolyticus
JCSC1435]
Length = 344
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 113/346 (32%), Positives = 191/346 (55%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 1 MHNKNNTILQTIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTQ 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAA+L+ DI+ +G +V GP + +PI + ID +
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVDIKSGIGPVISNPIKSVSDVDKLTQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLETIQLLTQE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNYTKAMMYGDEATWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L VS +Y++AQ+ AG ++IQIFD+ G L ++ Y S+ ++I+ ++ KY +
Sbjct: 178 LMNHLVQVSIDYVVAQVEAGAELIQIFDSWVGALNVQDYRYYIKPSMDKLINGIKAKY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW +S A ++ +QGNLDP L+
Sbjct: 237 VPVIMFGVGASHLINEWNDLA-IDVLGLDWRTSISSATKMGVNKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ V ILD + G IFNLGHG+ P+V P + + + V
Sbjct: 296 VIEQRVREILDEGMERGKHIFNLGHGVFPEVQPDTLKRVTQFVHDY 341
>gi|50311181|ref|XP_455614.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644750|emb|CAG98322.1| KLLA0F11770p [Kluyveromyces lactis]
gi|51997606|emb|CAD43074.1| uroporphyrinogen decarboxilase [Kluyveromyces lactis]
Length = 369
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 114/352 (32%), Positives = 189/352 (53%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G + PP W+MRQAGRYLPEY +++ ++F + C E E+T+QP+
Sbjct: 15 KNDLMLRAALGEKVERPPCWIMRQAGRYLPEYHEVKNG-RDFFETCRDAEIASEITIQPV 73
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL-FLNY 119
RRY DAAI+FSDILVI A+G V VE +GP +P+ T+E + + L+
Sbjct: 74 RRYAGLLDAAIIFSDILVIPQAMGMKVEMVEGKGPHFPEPLRTEEQLQKVLDYKVNVLDE 133
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L+GFCGAPWT+ YM GG + + + ++ + +
Sbjct: 134 LEWAFKAITMTRTKLDGQVPLLGFCGAPWTLLVYMTEGGGSRLFRFAKQWLNESPESSHK 193
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G LG +F+ ++ + +I V +
Sbjct: 194 LLQKITDVAVEFLCQQVVAGCQMLQVFESWGGELGSRDFDEFSLPYLKQIAERVPPRLKQ 253
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPM 292
+ FAKG+ Y L + NA+ LDWS + A+++ +QGNLDP
Sbjct: 254 LGIEERVPMVVFAKGSWYALDKLCD-SGYNAVSLDWSWDPAEAVKINSDRVTLQGNLDPG 312
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++++ V ++ G G +I N GHG P +DP+ + ++
Sbjct: 313 VIYGSDEIITKRVTEMVHGFGGGKQHYIVNFGHGTHPFMDPEKIKFFLQECH 364
>gi|254779402|ref|YP_003057507.1| uroporphyrinogen decarboxylase [Helicobacter pylori B38]
gi|254001313|emb|CAX29298.1| Uroporphyrinogen decarboxylase [Helicobacter pylori B38]
Length = 339
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 185/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + ++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYANSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ETILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|149197859|ref|ZP_01874908.1| uroporphyrinogen decarboxylase [Lentisphaera araneosa HTCC2155]
gi|149139080|gb|EDM27484.1| uroporphyrinogen decarboxylase [Lentisphaera araneosa HTCC2155]
Length = 343
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 126/343 (36%), Positives = 199/343 (58%), Gaps = 10/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ G PIWLMRQAGRY+PEYR +R+KF +FL+MC E VE+T+QPI +
Sbjct: 4 LLDTALGKKCERTPIWLMRQAGRYMPEYRAVREKF-SFLEMCMQYENAVEVTMQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLNYLLPIF 124
DAAILFSDIL +G +++F E GP + +PI E ++ P++ +Y ++
Sbjct: 63 VDAAILFSDILTPLIPMGFDLKFYEGRGPVIHNPIENAEDVSRVVVPDVKKGSDY---VY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++S +RKKL LIGF GAP+TVASY I GG K++ + + F Y +A++ L++ +
Sbjct: 120 DALSAIRKKLSPEKDLIGFSGAPFTVASYAIEGGSSKNYLKIKTFMYTQPKAYDELMNKI 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++++ YL+ Q AG ++QIFD+ G L ++ Y+ +II ++++ I
Sbjct: 180 AEMTCYYLLEQFKAGAQIVQIFDSWGGVLSREDYLKYSHPYTVKIIDFIKKETGGKPVIH 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVMID 303
F KGA + + ++ +G DW++PL+ A +L +QGNLDP L +++ D
Sbjct: 240 FVKGANAYFDSVAD-SQADVLGTDWTLPLNVAKDLCNNSRVLQGNLDPASLFSNKEILAD 298
Query: 304 GVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I + IFNLGHGI P+ +NV +V TV+S +
Sbjct: 299 KLELIREQAKGLKGHIFNLGHGIMPKTPVENVKFVVDTVKSWR 341
>gi|315586711|gb|ADU41092.1| uroporphyrinogen decarboxylase [Helicobacter pylori 35A]
Length = 340
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 4 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKVGSFLELCKNSDLATEVTLQPVEILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ FV +GP + IT ++ + L ++ +
Sbjct: 64 VDAAILFSDILVVPLEMGLNLEFVPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 122 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 182 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 242 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 EKILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|258593765|emb|CBE70106.1| Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase [NC10
bacterium 'Dutch sediment']
Length = 646
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 9/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ L+ + PIW+MRQAGRYL EYR+IR K +FL++C+ P+ E+T+
Sbjct: 306 QESPFLKACRLEPAPYTPIWIMRQAGRYLQEYREIRGKL-SFLELCHRPDLAAEVTVTAA 364
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
R DAAI+F DIL++ + +G + F + +GP + PI +D+ L
Sbjct: 365 ERLGVDAAIIFGDILLVVEPMGVGLEFTKGDGPVIHHPIRCGADLKRLQPVDVQ-GSLSF 423
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ + R LP +I LIGF GAP+T+ASY+I G + + Q + Y++ A++ L++
Sbjct: 424 LFEAVRLARAALPANIPLIGFAGAPFTLASYLIEGRGSRQYQQIKTLMYRDPAAWHALME 483
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
LSDV ++YL QI AGV V+Q+FD+ GCL ++ + R A+ R P
Sbjct: 484 RLSDVVSDYLNGQIAAGVQVVQLFDSWVGCLSPDDYREFVLPHTKR---AIARLVPGVPV 540
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I F +L R N IGLDW V L A L E VQGNLDP+ L +
Sbjct: 541 IHFGTDTTSLLP-LIREAGGNVIGLDWRVDLGEAWAGLGYEVGVQGNLDPVALFAEPDKI 599
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ IL+ P IFNLGHGI PQ ++ L+ V
Sbjct: 600 RRQADRILERAAKRPGHIFNLGHGILPQTPVDHLRVLIDYVHE 642
>gi|89100440|ref|ZP_01173303.1| uroporphyrinogen decarboxylase [Bacillus sp. NRRL B-14911]
gi|89084869|gb|EAR64007.1| uroporphyrinogen decarboxylase [Bacillus sp. NRRL B-14911]
Length = 348
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 114/352 (32%), Positives = 187/352 (53%), Gaps = 17/352 (4%)
Query: 1 MNER-KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M ++ L+ +G + P+W MRQAGR PEYR I++K+ + ++ + PE +T
Sbjct: 1 MAKQIDDTFLKAARGEKTDRVPVWYMRQAGRSQPEYRAIKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT----QEIYLLNPNID 114
P+ Y DAAIL+ DI+ A+G +V GP + +P+ + +++ L+P D
Sbjct: 60 RLPVENYGVDAAILYKDIMTPLPAIGVDVDIKTGIGPVISNPVRSLSDVEKLGELHPEQD 119
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ + +I +L ++ + LIGF GAP+T+ASYMI GG K++ + + F Y
Sbjct: 120 -----IPYVLDTIKLLTEE-QLTVPLIGFSGAPFTIASYMIEGGPSKNYNKTKAFMYSEP 173
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+A+ L+D L+D Y+ AQI AG IQ+FD+ G L ++ + + RI +A++
Sbjct: 174 QAWFALMDKLADTIIVYVKAQIKAGAKAIQLFDSWVGALNVADYRCFIKPVMERIFTALK 233
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
+ N I F GA ++ + L + +GLDW +P+S A E+ V GNLDP L
Sbjct: 234 EE--NVPLIMFGVGASHLAMEWHDLP-LDVVGLDWRLPISEAREMGIRKTVMGNLDPAIL 290
Query: 295 VVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +V+ + ILD + +IFNLGHG+ P V+P + L +
Sbjct: 291 LAPWEVIEERAREILDQGMQQPGYIFNLGHGVFPSVNPDTLKKLTGFIHDYS 342
>gi|282875784|ref|ZP_06284651.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis SK135]
gi|281294809|gb|EFA87336.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis SK135]
gi|329724898|gb|EGG61401.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU144]
Length = 344
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 108/346 (31%), Positives = 190/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MRSKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAA+L+ DI+ +G +V GP + +PI T + ID +
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L ++S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 178 LMNHLVNISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+
Sbjct: 237 VPIILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLLAPWD 295
Query: 300 VMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + IL L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 296 VIESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHNY 341
>gi|157413000|ref|YP_001483866.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9215]
gi|167012317|sp|A8G3U9|DCUP_PROM2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157387575|gb|ABV50280.1| Uroporphyrinogen decarboxylase (URO-D) [Prochlorococcus marinus
str. MIT 9215]
Length = 346
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 103/348 (29%), Positives = 179/348 (51%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGQDLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKEL-NPSES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ ++P
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPEDYDIFAGPYQKKVVDIVKAEHPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I + G+ +++ + T + I LDW+V + A + +QGN+DP L
Sbjct: 240 TPVILYISGSAGVIERMAK-TGIDIISLDWTVDIEEACKRIPSGIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + +I NLGHGI P +N + +K+
Sbjct: 299 ESIKERIDNTFNKTKDRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|189203601|ref|XP_001938136.1| uroporphyrinogen decarboxylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985235|gb|EDU50723.1| uroporphyrinogen decarboxylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 365
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 125/354 (35%), Positives = 187/354 (52%), Gaps = 17/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY + + K +F + C +P+ LTLQPI
Sbjct: 9 KNDLILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-NDFFECCRSPDIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ T + ++ ++
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPEPLQTPDDKQYKEVLEREVDVA 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 128 ESLDYVYKAITMTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPEET 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+ +A + I + +
Sbjct: 188 KALLKKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTCFKTFALPYLNHIADNLPARI 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
FAKGA Y L + T+ N IGLDW + A ++ K +QGN D
Sbjct: 248 KSKGLEPVPMTVFAKGAWYALSDLCD-TNYNTIGLDWLHAPAEAYKVAQAKGKVLQGNAD 306
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHGITP V P ++ + +
Sbjct: 307 PGVLYGTRESITKVVEEMVAGFGGGKQGWIANLGHGITPFVKPDDLKFYFEEIH 360
>gi|223994985|ref|XP_002287176.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976292|gb|EED94619.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 392
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 106/351 (30%), Positives = 178/351 (50%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +G P+W+MRQAGR++ EYR + KK+ F + PE VE++LQP R
Sbjct: 39 DPLLIRAARGETTERVPVWMMRQAGRHIKEYRDLCKKYPTFRERSEIPEVAVEVSLQPWR 98
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
Y D ILFSDIL +G E GP + P+ T + ID + +
Sbjct: 99 NYQTDGCILFSDILTPLPGMGVEFDIDEKVGPVVKPMRTWDDVNKMHLIDPSKS-IPFTA 157
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ILR+++ ++GF G P+T+A+Y++ G K++ + + A+ + + +L L
Sbjct: 158 EALRILRQEVTPETAVLGFVGCPYTLATYLVEGKTSKEYLEIKKMAFTEPKLLHAILKNL 217
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
S+ AEY + QI G +IQIFD+ AG L +++ +AA I+ ++ KYP ++
Sbjct: 218 SESIAEYALFQIENGAQLIQIFDSWAGHLSPRDYDEFAAPYQKVILDKIKEKYPTVPTVT 277
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----------LQKEGPVQGNLDPMRL 294
+ K +G +++ T + + LDW+V ++ E L+ G VQGNLDP L
Sbjct: 278 YIKHSGALIERMAA-TGVDVVSLDWTVDMAEGRERIAAGRAKAGLEGPGGVQGNLDPGVL 336
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + I+ G + NLGHGI +N ++TVR+ +
Sbjct: 337 FGDFATIKERAEEIMKKAGPTGHVMNLGHGIEAATPEENAAYFIETVRNYR 387
>gi|239928245|ref|ZP_04685198.1| uroporphyrinogen decarboxylase [Streptomyces ghanaensis ATCC 14672]
Length = 346
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 114/342 (33%), Positives = 175/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ LD C PE E+TLQP+R
Sbjct: 8 DSPFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGIG-MLDSCMRPELVAEITLQPVR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP ++ P+ T+ L DL + +
Sbjct: 67 RHRVDAAIFFSDIVVPLKAIGIDLDIKPGIGPVVEQPVRTRAD--LARLRDLTPEDVSYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG + + + Y + + LLD
Sbjct: 125 TEAIGLLLPEL-GSTPLIGFAGAPFTLASYLVEGGPSRTYENAKAMMYGDPELWADLLDR 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++A +L QI AGV +Q+FD+ AG L ++ + ++ V I
Sbjct: 184 LADITAAFLKVQIEAGVSAVQLFDSWAGALAPADYRRSVLSASAKVFREVADH--GVPRI 241
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 242 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPTVLFAGREAVE 300
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L+ G IFNLGHG+ P + + LV+ V +
Sbjct: 301 AKAQEVLESAAGLEGHIFNLGHGVMPSTEADALTHLVEYVHT 342
>gi|317014025|gb|ADU81461.1| uroporphyrinogen decarboxylase [Helicobacter pylori Gambia94/24]
Length = 339
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 117/339 (34%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIESEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + +FD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMVFDSWASALEKEAYVKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLESAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL ++G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKIMGNRGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|332673597|gb|AEE70414.1| uroporphyrinogen decarboxylase [Helicobacter pylori 83]
Length = 340
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 4 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 64 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y S LL+ LS
Sbjct: 122 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSESEVLKALLEKLSL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AG + + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 182 ELIEYLSLQIQAGANAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 242 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 ERILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|71024153|ref|XP_762306.1| hypothetical protein UM06159.1 [Ustilago maydis 521]
gi|46101811|gb|EAK87044.1| hypothetical protein UM06159.1 [Ustilago maydis 521]
Length = 414
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 125/374 (33%), Positives = 193/374 (51%), Gaps = 37/374 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ I+ +G P W+MRQAGRYLPE+R+IR+ +F + C PE E+T+QPI
Sbjct: 30 KNDLIIRAARGYQTERAPCWIMRQAGRYLPEFRKIRED-HDFFECCRNPELASEITVQPI 88
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNY 119
RRY+ DAAI+FSDILV+ A+G V + +GP DP +T +++
Sbjct: 89 RRYSGLLDAAIIFSDILVVPQAMGMEVEMLPAKGPHFPDPLVTPKDVTTKLKKKVDVDKE 148
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L ++++I++ R KL + LIGFCGAPWT+ +YM+ GG K + + + ++
Sbjct: 149 LGYVYEAIAMTRTKLDGEVPLIGFCGAPWTLMAYMVEGGGSKTFEKAKAWLFKYPEESKE 208
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR----- 234
LL ++DV ++L+ Q+ AG ++Q+FD+ AG L +F ++ + I ++VR
Sbjct: 209 LLQRIADVCTDFLVGQVKAGAQLLQVFDSWAGELSPSDFRQFSLPFLRSIAASVRDILST 268
Query: 235 RKYPNAKFISFAKGA-GYMLKNYRRLTDSNAIGLDWSVPLSFALEL-------------- 279
+ P I FAKGA G+ L + + +GLDW+V A ++
Sbjct: 269 KSIPCPPLIVFAKGALGHSLPEVVK-AGYDVVGLDWTVEPCVARKVVDLASPGKPSYQDA 327
Query: 280 ------QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-----FIFNLGHGITPQ 328
+QGN+DP L G + + V +L G +I NLGHGITP
Sbjct: 328 SGQNEAGHRLALQGNMDPAVLYAGKEAIEAKVEEMLRSKKGGFGGGGAYIANLGHGITPG 387
Query: 329 VDPKNVLDLVKTVR 342
VDP+ V +K V
Sbjct: 388 VDPEAVRIYLKAVH 401
>gi|32475041|ref|NP_868035.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
gi|32445581|emb|CAD75582.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica SH 1]
Length = 673
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 112/347 (32%), Positives = 180/347 (51%), Gaps = 9/347 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + +G P+W+MRQAGRY+ EYR++R + ++FL++C P+ E+
Sbjct: 320 SQSSLFMRACRGEPTPRTPVWMMRQAGRYMQEYREVRSQ-QSFLELCANPKLCSEVMCTA 378
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ + N DAAI+FSD+L I +G ++ FV+ +GP + +P+ + +D L
Sbjct: 379 VEKLNVDAAIIFSDLLPILVPMGFDLEFVKGDGPVIHNPVRSAADVDRVKGLDN-PQDLG 437
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++++ R LP I LIGF GAP+T+ASY I GG + + + + L+
Sbjct: 438 FVYETVKQTRADLPEGIPLIGFAGAPFTLASYAIEGGGSRQYSSTKALMRAGDGGWAALM 497
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+D YL QI AG +Q+FD+ AGCL ++ + + RI+ V P
Sbjct: 498 DRLTDAIIVYLNEQISAGAQCVQLFDSWAGCLSPGDYREFVLPWMKRILEGVT---PGVP 554
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I+FA G +L R +G+DW + L A + + VQGNLDP L+ +
Sbjct: 555 LINFATGNPELLPLLRGDRR-TVVGVDWRIELDVAWKRVGHDISVQGNLDPSVLLTDAKT 613
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V +L+ G P IFNLGHG+ Q +N ++LVK V+ +
Sbjct: 614 IRAAVQDVLNKAGGRPGHIFNLGHGVLQQTPVENAIELVKAVKELSV 660
>gi|223043623|ref|ZP_03613668.1| uroporphyrinogen decarboxylase [Staphylococcus capitis SK14]
gi|222443111|gb|EEE49211.1| uroporphyrinogen decarboxylase [Staphylococcus capitis SK14]
Length = 344
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 193/346 (55%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MHSKNDTILKTIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAA+L+ DI+ +G +V GP + +PI + + ID +
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIKSVQDVEKLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLETIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYGDEPTWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L DVS Y++AQI AG ++IQIFD+ G L ++ Y ++ +++S ++ Y +
Sbjct: 178 LMDHLVDVSITYVVAQIEAGAELIQIFDSWVGALNVQDYNYYIKPAMKKLVSGIKAHY-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW ++ A ++ +QGNLDP L+
Sbjct: 237 VPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQADQMGVNKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + ILD + G IFNLGHG+ P+V P+ + + K V +
Sbjct: 296 VIESRLKDILDQGMVRGKHIFNLGHGVFPEVQPETLRKVSKFVHNY 341
>gi|225680829|gb|EEH19113.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb03]
gi|226292528|gb|EEH47948.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb18]
Length = 365
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 118/355 (33%), Positives = 188/355 (52%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G I PPIW+MRQAGRYLPEY Q++ + +F C +PE LTLQP+
Sbjct: 9 QNDLLLRAARGEKIERPPIWVMRQAGRYLPEYHQVKGQ-HDFFACCRSPEIASTLTLQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
RY+ DAAI+FSDILVI A+G V ++ +GP P Q LL+ +D+
Sbjct: 68 ERYSGLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPVKTPSDPQYQQLLDKQVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 -KELDYVYKAITLTRQKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPAA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++++ E+L Q+ AG ++Q+FD+ AG L F ++ + I + + ++
Sbjct: 187 SKALLQKIAEICVEHLALQVEAGAQLVQVFDSWAGELSPASFAEFSLPYLRYISAHLPKR 246
Query: 237 Y-----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L + + + LDW + A+++ K +QGN D
Sbjct: 247 LAEMGQERVPMTVFAKGAWYALDVLCE-SGYDVVSLDWLQDPAEAVKIAKGRVTLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ +I NLGHG+TP VDP+++ + +
Sbjct: 306 PGCLYGSREAITAVVENMVKGFWDGRRQGWIANLGHGVTPLVDPEDLKFYFQEIH 360
>gi|145353039|ref|XP_001420838.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581073|gb|ABO99131.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 102/340 (30%), Positives = 176/340 (51%), Gaps = 4/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L ++G + PPIW+MRQAGRY+ Y+ + KK F + T + VE++LQP +
Sbjct: 1 MLRAIRGEDVERPPIWMMRQAGRYMKVYQDLCKKHTTFRERSETVDLAVEISLQPYEAFK 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL + V+ GP +P+ + ++ + + + +S
Sbjct: 61 PDGVILFSDILTPLQGMNIPFDIVKGTGPIIFNPVREMDDIKSITPLEPEKS-VPFVGES 119
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +LR ++ N TL+GFCGAP+T+ASY++ GG + + A+ + + L++ L+D
Sbjct: 120 LKVLRNEIGNEATLLGFCGAPFTLASYIVEGGTSSHYKVIKKMAFDSPAVYEALMNKLTD 179
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EY Q +G V+QIFD+ A +FE Y + RI++ ++ +P+ I ++
Sbjct: 180 AVIEYTRYQADSGAQVVQIFDSWASEFSPADFEVYCLPYLQRIVAECKQTHPHVPLILYS 239
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G+ L+ T+++ I LD ++ ++ A L + VQGN+DP+ L + V
Sbjct: 240 SGSAGFLERLA-TTNADVISLDGTIDMADARARLGMDQAVQGNMDPLHLFASQDFITKKV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + G+ + NLGHG+ +NV KTVR +
Sbjct: 299 HETIAKAGNKKHVMNLGHGVMVGTPEENVGHFFKTVRDFR 338
>gi|260753413|ref|YP_003226306.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552776|gb|ACV75722.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 345
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 142/341 (41%), Positives = 207/341 (60%), Gaps = 6/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI
Sbjct: 9 DAPLLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLSLVEDSEAAAEATLQPID 68
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPI 123
R++FDAAILFSDILVI ALG+++ FV+ EGP++ P + + LL D L PI
Sbjct: 69 RFHFDAAILFSDILVIPYALGQDLTFVKGEGPKLTPALVNHRLDLLTKLPD----RLTPI 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++
Sbjct: 125 YETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEA 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 185 IIDLTVLYLDGQIKAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPII 244
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 245 GFPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALD 304
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 305 QSITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIRG 345
>gi|315195745|gb|EFU26132.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 344
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 115/346 (33%), Positives = 194/346 (56%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 1 MHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID +
Sbjct: 60 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 178 LMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+
Sbjct: 237 VPVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWN 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + + ILD + +G IFNLGHG+ P+V P+ + + V +
Sbjct: 296 VIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSGFVHTY 341
>gi|308061937|gb|ADO03825.1| uroporphyrinogen decarboxylase [Helicobacter pylori Cuz20]
Length = 339
Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ R+K +FL +C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRQKAGSFLGLCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKIGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYVHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|254527123|ref|ZP_05139175.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9202]
gi|221538547|gb|EEE41000.1| uroporphyrinogen decarboxylase [Prochlorococcus marinus str. MIT
9202]
Length = 346
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 103/348 (29%), Positives = 179/348 (51%), Gaps = 6/348 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L G +N PP+W+MRQAGRY+ YR +R+++ +F + PE + E+++
Sbjct: 1 MGQDLPLLLSAALGKKVNRPPVWMMRQAGRYMKIYRDLRERYPSFRERSENPELSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP + D ILFSDIL +G N +E++GP + DPI +
Sbjct: 61 QPFHAFKPDGVILFSDILTPLPGMGINFEIIESKGPIIEDPIRNLNQIENLKEL-NPSES 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + Q +S L+K + N T++GF GAPWT+A+Y++ G K++ + A++ +
Sbjct: 120 LSFVGQVLSSLKKDVNNEATVLGFVGAPWTLAAYVVEGKSSKNYSLIKSMAFKEPGLLHK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD + EYL QI +G V+QIFD+ AG L +++ +A +++ V+ ++P
Sbjct: 180 LLDHFAKSIGEYLKYQIKSGAQVVQIFDSWAGQLSPQDYDIFAGPYQKKVVDIVKAEHPE 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGN 298
I + G+ +++ + T + I LDW+V + A + +QGN+DP L
Sbjct: 240 TPVILYISGSAGVIERMSK-TGIDIISLDWTVDIEEACKRIPSGIGIQGNVDPGILFGNK 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + ++ + +I NLGHGI P +N + +K+
Sbjct: 299 ESIKERIDNTFNKTKDRKYILNLGHGILPGTPEENAQTFFE--HGKKL 344
>gi|315502678|ref|YP_004081565.1| uroporphyrinogen decarboxylase [Micromonospora sp. L5]
gi|315409297|gb|ADU07414.1| uroporphyrinogen decarboxylase [Micromonospora sp. L5]
Length = 380
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+R
Sbjct: 39 DSPFVRACRREPGPHTPVWFMRQAGRSLPEYREIRANVP-MLESCRRPDLVTEITLQPVR 97
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ T I + + +
Sbjct: 98 RHGVDAAILFSDIVVPVAAAGIDLDIVPGTGPVVAEPVRTAADVERITPI--GRDDVSYV 155
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L +L LIGF GAP+T+ASY++ GG + H + + Y + ++ L
Sbjct: 156 DEAVRRLVVEL-GDTPLIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCAR 214
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++V+ +L QI AGV +Q+FD+ AG L E ++ + ++ + I
Sbjct: 215 LAEVTLAFLQVQIDAGVSAVQLFDSWAGALSEADYRRFVLPHSTYVLGGLADA--GVPRI 272
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW PL A + + VQGNLDP L+ G V+
Sbjct: 273 HFGVGTGELLGAMGE-AGADVVGVDWRTPLDVATGRIGPDKAVQGNLDPTVLLAGWPVVE 331
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I++ + P +FNLGHG+ P+ DP+ + +V V
Sbjct: 332 AEVRRIVEQGRAAPGHVFNLGHGVLPETDPEVLTRVVALVHE 373
>gi|239945116|ref|ZP_04697053.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
gi|239991579|ref|ZP_04712243.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
11379]
gi|291448579|ref|ZP_06587969.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
gi|291351526|gb|EFE78430.1| uroporphyrinogen decarboxylase [Streptomyces roseosporus NRRL
15998]
Length = 365
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 173/346 (50%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
L+ + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQ
Sbjct: 24 ATHDSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMMPELVAEITLQ 82
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ GP + +PI T+ L DL +
Sbjct: 83 PVRRHKVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVIAEPIRTRAD--LARLRDLTPEDV 140
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I IL +L LIGF GAP+T+ASY++ GG ++H + + Y + + + L
Sbjct: 141 PYVTEAIGILTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMYGDPQLWADL 199
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L++++ +L QI AG +Q+FD+ G L ++ + ++ AV
Sbjct: 200 VDRLAEITGAFLKVQIEAGASAVQLFDSWVGALAPADYRRAVLPASAKVFDAVAPY--GV 257
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VPL A + +QGNLDP L
Sbjct: 258 PRIHFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAPTP 316
Query: 300 VMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +LD +FNLGHG+ P +DP + LV V +
Sbjct: 317 AVEAKTREVLDAAAGLDGHVFNLGHGVMPNMDPDALTRLVAYVHEQ 362
>gi|314936113|ref|ZP_07843460.1| uroporphyrinogen decarboxylase [Staphylococcus hominis subsp.
hominis C80]
gi|313654732|gb|EFS18477.1| uroporphyrinogen decarboxylase [Staphylococcus hominis subsp.
hominis C80]
Length = 344
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 192/346 (55%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+++ IL+ ++G + + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 1 MHKKNNTILQTIKGELTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAA+L+ DI+ +G +V GP + +PI + + ID +
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSVKDVEKLTQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I IL ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLETIKILTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R++ ++ ++ N
Sbjct: 178 LMNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPFMDRLVCGIKEQH-N 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + A +L +QGNLDP L+
Sbjct: 237 IPVILFGVGASHLINEWNDLP-IDVLGLDWRTSILQADQLGVNKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ V AILD + G IFNLGHG+ P+V P + + + V
Sbjct: 296 VLEQRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHDY 341
>gi|302522531|ref|ZP_07274873.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB78]
gi|302431426|gb|EFL03242.1| uroporphyrinogen decarboxylase [Streptomyces sp. SPB78]
Length = 355
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 113/348 (32%), Positives = 174/348 (50%), Gaps = 12/348 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
R L+ + + P+W MRQAGR LPEY + R+ L+ C PE E+T+Q
Sbjct: 14 TPRDSVFLKACRREPVPYTPVWFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITMQ 72
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNY 119
P+RR+ DAA+ FSDI+V A+G ++ GP + DP+ ++ L P L
Sbjct: 73 PVRRHKVDAAVYFSDIVVPLKAIGIDLDIKPGIGPVVADPVRGAADLARLRP---LEPED 129
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I +L +L LIGF GAP+T+ASY++ GG ++H + + Y +
Sbjct: 130 VSYVTEAIGLLTAEL-GATPLIGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWAR 188
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+D++ +L QI AG +Q+FD+ G L ++ Y + ++ +AV
Sbjct: 189 LLDRLADITTGFLKVQIEAGASAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--G 246
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
I F G G +L + ++ +G+DW VPL A + +QGNLDP L
Sbjct: 247 VPRIHFGVGTGELLHDLGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFADE 305
Query: 299 QVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +LD IFNLGHG+ P DP + DLV V
Sbjct: 306 AAIREKTTEVLDAARDLEGHIFNLGHGVLPTTDPGVLTDLVADVHERS 353
>gi|323309846|gb|EGA63049.1| Hem12p [Saccharomyces cerevisiae FostersO]
Length = 367
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 112/347 (32%), Positives = 177/347 (51%), Gaps = 15/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP W+MRQAGRYLPEY +++ ++F C E E+T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPCWIMRQAGRYLPEYHEVKNN-RDFFQTCRDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNY 119
RRY DAAI+FSDILVI A+G V +E +GP +P+ E + + L
Sbjct: 67 RRYRGLIDAAIIFSDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKE 126
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L GFCG PWT+ YM GG + + + +
Sbjct: 127 LDWAFKAITMTRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHK 186
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++
Sbjct: 187 LLQKITDVAVEFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQE 246
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPM 292
I FAKG+ Y L + + + LDWS A+++ K +QGNLDP
Sbjct: 247 LGIMEQIPMIVFAKGSWYALDKLC-CSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDL 337
+ +V+ V +++ G G +I N GHG P +DP +
Sbjct: 306 VMYGSKEVITKKVKQMIEAFGGGKSRYIVNFGHGTHPFMDPDVIKFF 352
>gi|283777967|ref|YP_003368722.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
gi|283436420|gb|ADB14862.1| uroporphyrinogen decarboxylase [Pirellula staleyi DSM 6068]
Length = 641
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 117/344 (34%), Positives = 177/344 (51%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+WLMRQAGRY+ EYR +R + FLD+C P E+ ++
Sbjct: 302 DSPFLKACRGEPTDVTPVWLMRQAGRYMEEYRAVRGQV-TFLDLCKNPSLCSEIMCTAVK 360
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R DAAI+FSD+L I + +G ++ F + EGP + +P+ T ++ L L +
Sbjct: 361 RLGVDAAIIFSDLLPILEPMGLDLEFAKGEGPVIHNPLKTAADVDRVKELEE-LGSLDFV 419
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++ R LP + LIGF G+P+T+ASY I GG +++ + Y + A+ L+
Sbjct: 420 FETVRQTRADLPEDMPLIGFAGSPFTLASYAIEGGSSRNYLTTKSLMYSDEGAWTALMQK 479
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS YL AQI +G V+Q+FD+ GCLG +++ Y V II + P I
Sbjct: 480 LSRSITRYLNAQIASGAQVVQLFDSWVGCLGPYDYRRYVLPHVASIIDGIT---PGVPVI 536
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+FA G +L IG+DW V L+ A + + + VQGNLDP+ L+ +
Sbjct: 537 NFATGNPALLPLLAEAGG-RVIGVDWRVSLADAWKTVGYDRSVQGNLDPITLLGPRDELK 595
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +LD G IFNLGHG+ Q N + +V V
Sbjct: 596 RRVKLVLDEAAGRAGHIFNLGHGVLQQTPVDNAIAVVDFVHELS 639
>gi|15924824|ref|NP_372358.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927408|ref|NP_374941.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
N315]
gi|21283503|ref|NP_646591.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MW2]
gi|49486650|ref|YP_043871.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650622|ref|YP_186715.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
COL]
gi|87162428|ref|YP_494466.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88195655|ref|YP_500461.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|148268305|ref|YP_001247248.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH9]
gi|150394367|ref|YP_001317042.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH1]
gi|151221937|ref|YP_001332759.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156980150|ref|YP_001442409.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu3]
gi|221142182|ref|ZP_03566675.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315165|ref|ZP_04838378.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253732490|ref|ZP_04866655.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253735287|ref|ZP_04869452.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006622|ref|ZP_05145223.2| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793807|ref|ZP_05642786.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9781]
gi|258413744|ref|ZP_05682017.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9763]
gi|258420748|ref|ZP_05683687.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9719]
gi|258438410|ref|ZP_05689694.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9299]
gi|258447310|ref|ZP_05695457.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6300]
gi|258448207|ref|ZP_05696334.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6224]
gi|258452676|ref|ZP_05700675.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5948]
gi|258453360|ref|ZP_05701343.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5937]
gi|262050129|ref|ZP_06022983.1| uroporphyrinogen decarboxylase [Staphylococcus aureus D30]
gi|262052672|ref|ZP_06024864.1| uroporphyrinogen decarboxylase [Staphylococcus aureus 930918-3]
gi|269203470|ref|YP_003282739.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED98]
gi|282924163|ref|ZP_06331838.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9765]
gi|282928570|ref|ZP_06336169.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A10102]
gi|284024880|ref|ZP_06379278.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
132]
gi|294850261|ref|ZP_06790996.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9754]
gi|295406139|ref|ZP_06815947.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8819]
gi|296276034|ref|ZP_06858541.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MR1]
gi|297207451|ref|ZP_06923888.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244937|ref|ZP_06928814.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8796]
gi|300911536|ref|ZP_07128981.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380565|ref|ZP_07363240.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|54036968|sp|P67420|DCUP_STAAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54036969|sp|P67421|DCUP_STAAW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|54041040|sp|P67419|DCUP_STAAM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56748664|sp|Q6G8A2|DCUP_STAAS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71153329|sp|Q5HEU2|DCUP_STAAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122539215|sp|Q2FXA3|DCUP_STAA8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123485283|sp|Q2FFR2|DCUP_STAA3 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234291|sp|A7X3T8|DCUP_STAA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172048956|sp|A6QI15|DCUP_STAAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083025|sp|A6U2T7|DCUP_STAA2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083026|sp|A5ITZ9|DCUP_STAA9 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13701627|dbj|BAB42920.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
N315]
gi|14247606|dbj|BAB57996.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu50]
gi|21204944|dbj|BAB95639.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MW2]
gi|49245093|emb|CAG43559.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284808|gb|AAW36902.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
COL]
gi|87128402|gb|ABD22916.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203213|gb|ABD31023.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741374|gb|ABQ49672.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH9]
gi|149946819|gb|ABR52755.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JH1]
gi|150374737|dbj|BAF67997.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156722285|dbj|BAF78702.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Mu3]
gi|253723771|gb|EES92500.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726694|gb|EES95423.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257787779|gb|EEV26119.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9781]
gi|257839531|gb|EEV64002.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9763]
gi|257843352|gb|EEV67762.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9719]
gi|257848454|gb|EEV72445.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9299]
gi|257853897|gb|EEV76853.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6300]
gi|257858446|gb|EEV81322.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A6224]
gi|257859651|gb|EEV82500.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5948]
gi|257864452|gb|EEV87197.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A5937]
gi|259159421|gb|EEW44473.1| uroporphyrinogen decarboxylase [Staphylococcus aureus 930918-3]
gi|259161754|gb|EEW46342.1| uroporphyrinogen decarboxylase [Staphylococcus aureus D30]
gi|262075760|gb|ACY11733.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED98]
gi|269941305|emb|CBI49702.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TW20]
gi|282589779|gb|EFB94864.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A10102]
gi|282592958|gb|EFB97960.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9765]
gi|285817514|gb|ADC38001.1| Uroporphyrinogen III decarboxylase [Staphylococcus aureus 04-02981]
gi|294822877|gb|EFG39311.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9754]
gi|294969136|gb|EFG45157.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8819]
gi|296887914|gb|EFH26810.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178017|gb|EFH37265.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8796]
gi|300887168|gb|EFK82368.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH70]
gi|302751643|gb|ADL65820.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340894|gb|EFM06819.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|312830206|emb|CBX35048.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315130524|gb|EFT86510.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196820|gb|EFU27164.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141316|gb|EFW33161.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143555|gb|EFW35335.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314510|gb|AEB88923.1| Uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
T0131]
gi|329727242|gb|EGG63698.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21172]
gi|329729490|gb|EGG65892.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21189]
gi|329732961|gb|EGG69305.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
21193]
Length = 345
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 195/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|289617056|emb|CBI56124.1| unnamed protein product [Sordaria macrospora]
Length = 369
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 120/357 (33%), Positives = 187/357 (52%), Gaps = 21/357 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F ++C PE LTLQPI
Sbjct: 9 KNDLLLRAARGETVERPPIWVMRQAGRYLPEYHEAKGG-RDFFEVCRDPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V V+ +GP DP+ + L+ ++D+
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPDPLRSPSDGQYAELMKRDVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ RKKL + L GF GAPWT+ YM+ GG K + + + Y+
Sbjct: 128 -KELDYVYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKEVKTWIYKYPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S++ EYL Q+ AG +IQ+FD+ AG L F+ ++A + I + +
Sbjct: 187 TKALLQKISELCVEYLALQVKAGAQIIQVFDSWAGELSPSSFKEFSAPYLTYIAKHLPLR 246
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQGNL 289
+ F KGA Y L + N +GLDW + A+++ + P +QGN
Sbjct: 247 LKEMGLEPVPMVVFPKGAWYALDAACDM-GYNVVGLDWLHDPAEAVKIVGDRPMVIQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L ++ + V ++ +I NLGHGITP V+P ++ + +
Sbjct: 306 DPGVLYGSHEAITKVVEEMVRGFDWHGRHKGWIVNLGHGITPFVNPDDLKFFFEEIH 362
>gi|328541696|ref|YP_004301805.1| Uroporphyrinogen decarboxylase [polymorphum gilvum SL003B-26A1]
gi|326411448|gb|ADZ68511.1| Uroporphyrinogen decarboxylase [Polymorphum gilvum SL003B-26A1]
Length = 319
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 149/319 (46%), Positives = 204/319 (63%), Gaps = 2/319 (0%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR+ R K NFLD CY P+ E+TLQPIRRY FDA+ILFSDI V+ DA
Sbjct: 1 MMRQAGRYLPEYREARAKAPNFLDFCYNPDLATEVTLQPIRRYGFDASILFSDIFVVPDA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
+G VRF E GP ++P++ + + L +L P+ +++ LR +LP TL+GF
Sbjct: 61 IGYPVRFEEGRGPVLEPLSAKLVDGL--EQGRAEAHLEPVIETVRRLRAQLPGETTLLGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA Y ++G +D R+ +Y++ +D L S +YL+ Q+ AG D +
Sbjct: 119 CGAPWTVACYSVAGHTTQDQTAARIGSYRDPALLGRFIDQLVTASIQYLVRQLEAGADAV 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFDT AG L E F + I++ V+ + P AK I F K + L++Y T +
Sbjct: 179 QIFDTWAGVLDEDGFRRWCIEPTRAIVAGVKAQRPEAKVIGFPKASAARLESYIDGTGID 238
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
A+GLDW+VP + A +Q+ PVQGNLDPMRLV G + + DG++ +L LG GP IFNLGH
Sbjct: 239 AVGLDWTVPDTLARTVQRRVPVQGNLDPMRLVAGGKALDDGIDRVLSALGEGPLIFNLGH 298
Query: 324 GITPQVDPKNVLDLVKTVR 342
G+TP+ DP NV +V+ VR
Sbjct: 299 GVTPETDPDNVARMVERVR 317
>gi|328885876|emb|CCA59115.1| Uroporphyrinogen III decarboxylase [Streptomyces venezuelae ATCC
10712]
Length = 358
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 179/344 (52%), Gaps = 10/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
L+ + + P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP
Sbjct: 18 THDSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVTEITLQP 76
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+RR+ DAAI FSDI+V A+G ++ GP + DPI T+ L+ DL + +
Sbjct: 77 VRRHKVDAAIYFSDIVVPLKAIGLDLDIKPGVGPVVADPIRTRAD--LDRLRDLTPDDVH 134
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I +L +L LIGF GAP+T+ASY++ GG + H + + Y + + + LL
Sbjct: 135 YVTEAIGMLTAEL-GDTPLIGFAGAPFTLASYLVEGGPSRSHERTKAMMYGDPQLWADLL 193
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+++++ +L QI AG +Q+FD+ G L ++ + ++ AV
Sbjct: 194 DRLAEITSAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASVKVFDAVAGY--GVP 251
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQV 300
I F G G +L ++ +G+DW VPL A + +QGNLDP L G +V
Sbjct: 252 RIHFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAGREV 310
Query: 301 MIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +L +FNLGHG+ P +DP + LV+ V +
Sbjct: 311 VEAKTDEVLAAAKGLEGHVFNLGHGVMPSMDPDALTRLVEYVHT 354
>gi|149177574|ref|ZP_01856176.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
gi|148843554|gb|EDL57915.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Planctomyces maris DSM 8797]
Length = 352
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + ++ ++ ++ PIW+MRQAGRYLPEY ++R K F+++C TP E+TL
Sbjct: 12 QNSRFMKAVRREPVDTTPIWIMRQAGRYLPEYMEVRNKV-TFIELCKTPALAAEVTLTAQ 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R DAAILF+D+L I + +G ++ +++ EGP + +PI +I ++ L
Sbjct: 71 RVLGVDAAILFADLLPILEPMGLDLEYLKGEGPVIHNPIQDASQVDRLTDI-ADMDCLDF 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ++ ++R LP I L+GF G P+T+ASY I GG K++ + + Y + A+N L++
Sbjct: 130 VFQAVKLIRADLPADIPLLGFAGCPFTLASYAIEGGSSKNYRRTKQMMYNDPSAWNALMN 189
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
D YL QI AG +QIFD+ AGCL +++ Y ++++ V+ +A
Sbjct: 190 RFVDNLIVYLQRQIAAGCQAVQIFDSWAGCLSPEDYQQYVQPYTAKLVAGVQ---DHAPV 246
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I+F G +L +R G+DW + LS A E+ + +QGN+DP+ L V+
Sbjct: 247 INFLTGNPALL-GLQRQAGGQVFGVDWRINLSDAWEIFGSDVAIQGNMDPIVLYAELPVL 305
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A+LD G IFNLGHG+ P ++P +V LV+ V
Sbjct: 306 KQKAKAVLDAAAGRNGHIFNLGHGVMPDMNPDHVKALVEMVHE 348
>gi|134098412|ref|YP_001104073.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
gi|291003372|ref|ZP_06561345.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
gi|172044125|sp|A4FAS3|DCUP_SACEN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|133911035|emb|CAM01148.1| uroporphyrinogen decarboxylase (partial match) [Saccharopolyspora
erythraea NRRL 2338]
Length = 363
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 119/344 (34%), Positives = 177/344 (51%), Gaps = 16/344 (4%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAI 72
+G P+W MRQAGR LPEYR++R+ L C TP+ E+T QP+RR+ DAAI
Sbjct: 23 RGETPRHTPVWFMRQAGRSLPEYRKVREGIP-MLQSCLTPDLVCEITAQPVRRHGVDAAI 81
Query: 73 LFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILR 131
LFSDI++ A G + V GP + +P+ T P+ L + + ++ +L
Sbjct: 82 LFSDIVLPLHAAGVGLDIVAGTGPVVAEPVRTAADVAALPS--LAPEQVSKVGDAVGLLL 139
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+L LIGF GAP+T+ASY++ GG ++H + + + ++ LL+ L+D + +
Sbjct: 140 DEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSEPATWHALLEKLADTTLTF 198
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK--YPNAKFISFAKGA 249
L Q+ AGVD IQ+FD+ AG L ++ + RI V I F G
Sbjct: 199 LRTQLAAGVDAIQLFDSWAGALSLRDYREFVLPHSRRIFEGVAETPGAAGVPKIHFGVGT 258
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-------PVQGNLDPMRLVVGNQVMI 302
G +L R ++ +G+DW VPL A + +E VQGNLDP L G + +
Sbjct: 259 GELLGAM-RSAGADVVGVDWRVPLDTAAQRLREAGPDQGAPVVQGNLDPAVLFAGWEAVE 317
Query: 303 DGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL +G IFNLGHG+ P DP + +V+ V +E
Sbjct: 318 REVRRILAEGRAAGGHIFNLGHGVLPSTDPGVLTRVVELVHAES 361
>gi|224418385|ref|ZP_03656391.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|253827703|ref|ZP_04870588.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|313141916|ref|ZP_07804109.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|253511109|gb|EES89768.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
gi|313130947|gb|EFR48564.1| uroporphyrinogen decarboxylase [Helicobacter canadensis MIT
98-5491]
Length = 338
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 125/339 (36%), Positives = 184/339 (54%), Gaps = 5/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W MRQAGRYL EYR+ RK+ +FL +C P+ E+TLQPI
Sbjct: 3 FIDACFGKETPYTPVWFMRQAGRYLSEYRETRKQAGDFLSLCKNPKLASEVTLQPIDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G + F EGP+ + L D L+ L ++ +I
Sbjct: 63 VDAAILFSDILVVPMEMGMELGFFTGEGPKFTQTIQSDKDLKQLRQDSHLS-LNYVYDTI 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++ R+KL LIGFCGAPWT+A+YMI G K + Q + Y N++ + LL+ ++
Sbjct: 122 TMTRQKLAKDKALIGFCGAPWTLATYMIEGQGSKTYNQTKKILYSNAQFLHNLLELITHN 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL +QI AGV+ + IFD+ A L E + + +I S +++KYP I F K
Sbjct: 182 LKNYLESQIKAGVNAVMIFDSWAAALEESAYLEFGFEYCKQIASFIKQKYPEIPVILFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS PL A E L + +QGNL+P R+ + M++G
Sbjct: 242 GISGYLDKI--DGEFDVFGVDWSTPLKIAKEKLGDKYVLQGNLEPCRIY-DEKSMLEGAK 298
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD++ IFNLGHG+ P + +N + LV + +
Sbjct: 299 DILDLMQGKRHIFNLGHGMLPDLPRENAIKLVDFIHQYR 337
>gi|118498225|ref|YP_899275.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida U112]
gi|194324409|ref|ZP_03058182.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida FTE]
gi|208780252|ref|ZP_03247594.1| uroporphyrinogen decarboxylase [Francisella novicida FTG]
gi|171472966|sp|A0Q8F6|DCUP_FRATN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118424131|gb|ABK90521.1| uroporphyrinogen decarboxylase [Francisella novicida U112]
gi|194321474|gb|EDX18959.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
novicida FTE]
gi|208743901|gb|EDZ90203.1| uroporphyrinogen decarboxylase [Francisella novicida FTG]
Length = 344
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 193/346 (55%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSTI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASCVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A + +QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|56707226|ref|YP_169122.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669696|ref|YP_666253.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301261|ref|YP_001121229.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224456287|ref|ZP_03664760.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254371441|ref|ZP_04987442.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC033]
gi|254373568|ref|ZP_04989054.1| hypothetical protein FTCG_01665 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254375033|ref|ZP_04990513.1| uroporphyrinogen decarboxylase [Francisella novicida GA99-3548]
gi|254874065|ref|ZP_05246775.1| hemE, uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|81677145|sp|Q5NIM0|DCUP_FRATT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123063631|sp|Q14K23|DCUP_FRAT1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|172044161|sp|A4IW07|DCUP_FRATW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|56603718|emb|CAG44680.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320029|emb|CAL08063.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049038|gb|ABO46109.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569680|gb|EDN35334.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis FSC033]
gi|151571292|gb|EDN36946.1| hypothetical protein FTCG_01665 [Francisella novicida GA99-3549]
gi|151572751|gb|EDN38405.1| uroporphyrinogen decarboxylase [Francisella novicida GA99-3548]
gi|254840064|gb|EET18500.1| hemE, uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158334|gb|ADA77725.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
tularensis NE061598]
gi|332678961|gb|AEE88090.1| Uroporphyrinogen III decarboxylase [Francisella cf. novicida Fx1]
Length = 344
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 193/346 (55%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A + +QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|296501778|ref|YP_003663478.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis BMB171]
gi|296322830|gb|ADH05758.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis BMB171]
Length = 348
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 185/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+ I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKSILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|327540526|gb|EGF27106.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Rhodopirellula baltica WH47]
Length = 673
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 112/347 (32%), Positives = 179/347 (51%), Gaps = 9/347 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + +G P+W+MRQAGRY+ EYR++R + + FL++C P+ E+
Sbjct: 320 SQSSLFMRACRGEPTPRTPVWMMRQAGRYMQEYREVRSQ-QTFLELCANPKLCSEVMCTA 378
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ + N DAAI+FSD+L I +G ++ FV+ +GP + +P+ + +D L
Sbjct: 379 VEKLNVDAAIIFSDLLPILVPMGFDLEFVKGDGPVIHNPVRSAADVDRVKGLDN-PQDLG 437
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++++ R LP I LIGF GAP+T+ASY I GG + + + + L+
Sbjct: 438 FVYETVKQTRADLPEGIPLIGFAGAPFTLASYAIEGGGSRQYSSTKALMRAGDGGWAALM 497
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+D YL QI AG +Q+FD+ AGCL ++ + + RI+ V P
Sbjct: 498 DRLTDAIIVYLNEQISAGAQCVQLFDSWAGCLSPGDYREFVLPWMKRILEGVT---PGVP 554
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I+FA G +L R +G+DW + L A + + VQGNLDP L+ +
Sbjct: 555 LINFATGNPELLPLLRGDRR-TVVGVDWRIELDVAWKRVGHDISVQGNLDPSVLLTDAKT 613
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V +L+ G P IFNLGHG+ Q +N ++LVK V+ +
Sbjct: 614 IRAAVQDVLNKAGGRPGHIFNLGHGVLQQTPVENAIELVKAVKELSV 660
>gi|291278740|ref|YP_003495575.1| uroporphyrinogen decarboxylase [Deferribacter desulfuricans SSM1]
gi|290753442|dbj|BAI79819.1| uroporphyrinogen decarboxylase [Deferribacter desulfuricans SSM1]
Length = 336
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 132/344 (38%), Positives = 193/344 (56%), Gaps = 14/344 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+VL G + PPIWLMRQAGRY+ EYR +R K FL++C TPE E+TLQPI
Sbjct: 2 KNDLLLKVLDGEKVERPPIWLMRQAGRYMKEYRDVRSKV-TFLELCKTPELACEVTLQPI 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R + DAAI+FSDIL+ + +G + F N P + +PI ++ +D L
Sbjct: 61 RAFGLDAAIVFSDILIPIEPMGVELDF--NPAPVIANPIRSKTDAEKLTLVD-PYKDLNF 117
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +L KL + LIGF GAP+T+A YM+ G K+ + F + + L++
Sbjct: 118 VIETVKLLVSKL--DVPLIGFSGAPFTLACYMVEGKGSKNFDVIKTFMRNDEDGYRILME 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
LSD + +YL AQI G V+QIFDT AG L +++E Y V II+ ++ NAK
Sbjct: 176 KLSDSTIKYLQAQIDNGCPVVQIFDTWAGVLSPYDYEKYVFPYVDYIINNLK----NAKV 231
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVM 301
I FAK + ++L +A+G+DWSV L +L + +QGN+DP L +
Sbjct: 232 IYFAKNGATFFNSLKKL-KCDALGVDWSVNLEDYAKLTDDEFVLQGNMDPTLLFASQDKI 290
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I++ + IFNLGHGI PQ +NV LVK V+ E
Sbjct: 291 REMTKTIINEGKNIKGHIFNLGHGILPQTPVENVEFLVKFVKGE 334
>gi|255725572|ref|XP_002547715.1| uroporphyrinogen decarboxylase [Candida tropicalis MYA-3404]
gi|240135606|gb|EER35160.1| uroporphyrinogen decarboxylase [Candida tropicalis MYA-3404]
Length = 361
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 110/350 (31%), Positives = 176/350 (50%), Gaps = 13/350 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY +++ ++F C E +T+QP+
Sbjct: 8 KNDLILRAAKGEKVERPPIWIMRQAGRYLPEYHEVK-GDRDFFQCCQDAEIASAITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G +++ V+ +GP DP+ E L
Sbjct: 67 DHFDGLIDAAIIFSDILVIPQAMGFDIKMVDGKGPVFSDPLRKPEDLDRIDLNPDVKTKL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+++I++ R KL + L+GF GAPWT+ YM G K + + ++ A + L
Sbjct: 127 AWAYKAITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKEWIFKYPEAAHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN- 239
L SD E+L Q+ AG ++QIF++ AG LG EF +A + +I + + +
Sbjct: 187 LQATSDACVEFLAQQVVAGAQMVQIFESWAGELGPDEFNEFALPYLRQISAKLPPRLKEL 246
Query: 240 -----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
FAKGA Y L + + + + LDW A+++ + +QGNLDP
Sbjct: 247 GIEEKIPMTVFAKGAWYALDDLCD-SGYDCVSLDWLYKPEDAVKVVNGRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++ + V +L G +I N GHG P +DPK + ++
Sbjct: 306 VMYGSDEAIAKKVEKMLKGFGKQNYIINFGHGTHPFMDPKKIEYFLQQCH 355
>gi|271967977|ref|YP_003342173.1| uroporphyrinogen decarboxylase [Streptosporangium roseum DSM 43021]
gi|270511152|gb|ACZ89430.1| Uroporphyrinogen decarboxylase [Streptosporangium roseum DSM 43021]
Length = 345
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 10/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + ++ P+W MRQAGR LPEYR +R + L C TPE VE+T+QP+R
Sbjct: 7 DSPFLRACRRLPVSRTPVWFMRQAGRSLPEYRAVRGEVP-MLTACATPELIVEITMQPVR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAI FSDI+V A+G ++ GP + +PI + + + + +
Sbjct: 66 RYGVDAAIFFSDIVVPLKAIGIDLDIKPGVGPVVAEPIR--DAAAIETLRPIEPGDVSYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L +L LIGF GAP+T+ASY+I GG K+H + Y R ++ +++
Sbjct: 124 TEAVRALTGELGP-TPLIGFAGAPFTLASYLIEGGPSKNHDHTKAMMYGEPRLWHAMMER 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++ E+L QI AG +Q+FD+ G + ++ + RI + + + I
Sbjct: 183 LTGITLEFLRIQIAAGASAVQLFDSWVGAVAPEDYREFVLPHTSRIFAGLADL--DVPRI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L +V+
Sbjct: 241 HFGVGTGELL-ALLGEAGADVVGVDWRVPLDEAARRVGPGKALQGNLDPATLFAPWEVVE 299
Query: 303 DGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL IFNLGHG+ P DP + L V
Sbjct: 300 RRAADILARGAKAEGHIFNLGHGVPPSTDPDQLARLTDFVHRAS 343
>gi|293366189|ref|ZP_06612875.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319711|gb|EFE60071.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 353
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 108/344 (31%), Positives = 189/344 (54%), Gaps = 7/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P
Sbjct: 12 SKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTHLP 70
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ Y DAA+L+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 71 VDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRD-VP 129
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L+
Sbjct: 130 YVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFALM 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 189 NHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-DVP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ V+
Sbjct: 248 IILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSVLLAPWDVI 306
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 307 ESRLKDILNQGLNRGKHIFNLGHGVFPEVKPETLRKVTEFVHNY 350
>gi|242374083|ref|ZP_04819657.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W1]
gi|242348208|gb|EES39810.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis
M23864:W1]
Length = 344
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 108/346 (31%), Positives = 189/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MHSKNDTILKTIKGETTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTQ 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAA+L+ DI+ +G +V GP + +PI + + ID +
Sbjct: 60 LPVDNYQTDAAVLYKDIMTPLKPIGVDVDIKSGIGPVISNPIKSVQDVEKLSQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYSDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L D+S Y++AQI AG ++IQIFD+ G L ++ Y ++ ++IS ++ + +
Sbjct: 178 LMNHLVDISITYVVAQIEAGAELIQIFDSWVGALNTQDYNYYIKPAMEKLISGIKAHH-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + A ++ + +QGNLDP L+
Sbjct: 237 VPVILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADDMGVKKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + ILD + G IFNLGHG+ P+V P+ + + V
Sbjct: 296 VIETRLKEILDQGMNRGKHIFNLGHGVFPEVKPETLRKVSAFVHQY 341
>gi|172045869|sp|Q1CTS0|DCUP_HELPH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 339
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVENLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EGILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|171696110|ref|XP_001912979.1| hypothetical protein [Podospora anserina S mat+]
gi|170948297|emb|CAP60461.1| unnamed protein product [Podospora anserina S mat+]
Length = 369
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 118/356 (33%), Positives = 185/356 (51%), Gaps = 19/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 10 KNDLLLRAARGETVERPPIWVMRQAGRYLPEYHEAKGG-RDFFECCRSPEIASTLTLQPI 68
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
R+ DAAI+FSDILVI A+G V V+ +GP DP+ T + ++ ++
Sbjct: 69 ERFGGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPDPLQTPQDKQYIELMERHVDVA 128
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ RKKL + L GF GAPWT+ YM+ GG K Q + + Y+
Sbjct: 129 KELDYVYKAITLTRKKLDGRVPLFGFTGAPWTLLCYMVEGGGTKLFKQVKTWIYKYPEET 188
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL +S++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + +
Sbjct: 189 KALLQKISELCVEYLALQVKAGAQIVQVFDSWAGELSPSSFKKFSQPYLAYIAKHLPLRL 248
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNLD 290
+ F KGA Y L + IG+DW + A+++ + PV QGN D
Sbjct: 249 KELGLEQVPMVVFPKGAWYALDACADM-GYQVIGMDWLHDPAEAVKIIGDRPVVLQGNAD 307
Query: 291 PMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L ++ + D V ++ +I NLGHGITP V+P ++ + +
Sbjct: 308 PGVLYGSHESITDVVTEMVKGFSWAERKKGWIVNLGHGITPFVNPDDLKFFFQEIH 363
>gi|254368525|ref|ZP_04984542.1| hypothetical protein FTAG_01374 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121419|gb|EDO65620.1| hypothetical protein FTAG_01374 [Francisella tularensis subsp.
holarctica FSC022]
Length = 344
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 193/346 (55%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A + +QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKHARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|149240365|ref|XP_001526058.1| uroporphyrinogen decarboxylase [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450181|gb|EDK44437.1| uroporphyrinogen decarboxylase [Lodderomyces elongisporus NRRL
YB-4239]
Length = 360
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 108/355 (30%), Positives = 178/355 (50%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PIW+MRQAGRYLPEY +++ K+F C E +T+QP+
Sbjct: 8 KNDLILRAAKGEKVERVPIWIMRQAGRYLPEYHEVK-GNKDFFQACQDAETASAITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL---LNPNIDLFL 117
++ DAAI+FSDILVI A+G + VE +GP P+ + + LNP++ + L
Sbjct: 67 DHFDGLIDAAIIFSDILVIPQAMGFEINMVEGKGPVFASPLRSPDDLARIDLNPDVKVKL 126
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ +++I++ RKKL + L+GF GAPWT+ YM G K + + ++ + A
Sbjct: 127 D---WAYKAITLTRKKLDGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFAKQWIFEYTEAA 183
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL D E+L Q+ AG ++Q+F++ AG L +F ++ + +I S + ++
Sbjct: 184 HKLLQATCDACIEFLAQQVVAGAQMLQVFESWAGELSPADFNTFSLPYLKQIASRLPKRL 243
Query: 238 ------PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNL 289
FAKGA Y L + + + LDW A ++ + +QGNL
Sbjct: 244 SELGIKEKIPLTVFAKGAWYALDDLCN-AGYDTVSLDWLYDPKAARKVVGDRRITLQGNL 302
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
DP + + V+ V ++ G +I N GHG P + P+ + +K
Sbjct: 303 DPGVMYGSDDVIDQKVKEMISGFGKENYIINFGHGTHPFMKPEKIERFLKLCHKY 357
>gi|242243054|ref|ZP_04797499.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis W23144]
gi|242233512|gb|EES35824.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis W23144]
Length = 353
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 107/344 (31%), Positives = 189/344 (54%), Gaps = 7/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P
Sbjct: 12 SKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTHLP 70
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ Y DAA+L+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 71 VDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVEKLSQIDPKRD-VP 129
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + ++
Sbjct: 130 YVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFAIM 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 189 NHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-DVP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ V+
Sbjct: 248 IILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQADKMGVNKAIQGNLDPSLLLAPWDVI 306
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL L G IFNLGHG+ P+V P+ + + + V +
Sbjct: 307 ESRLKDILNQGLDRGKHIFNLGHGVFPEVKPETLRKVTEFVHNY 350
>gi|254450824|ref|ZP_05064261.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 238]
gi|198265230|gb|EDY89500.1| uroporphyrinogen decarboxylase [Octadecabacter antarcticus 238]
Length = 322
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 140/322 (43%), Positives = 202/322 (62%), Gaps = 1/322 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEY+ R + +FL +CY PE E+TLQPIRRY FDA+ILF+DIL++ AL
Sbjct: 1 MRQAGRYLPEYKATRAQAGDFLSLCYNPELAAEVTLQPIRRYGFDASILFADILLLPQAL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G ++ FV EGPR+ +TT + + + L PI+++I +L +LP+ +TLIGF
Sbjct: 61 GADLWFVTGEGPRLSTVTTADELKALKPVSAIHDTLSPIYETIKLLTGELPDDVTLIGFA 120
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWTVA+YMI+G D G + F LLD ++D + EYL AQI+AG +V++
Sbjct: 121 GAPWTVATYMIAGQGSPDQGPAHALKDTDKAVFEGLLDLITDGTIEYLSAQINAGAEVVK 180
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
+FD+ AG L +F NYA + + RI++A+++++P+ I+F +GA ++
Sbjct: 181 LFDSWAGSLMGDDFTNYAIKPMARIVAALKQRHPDTPIIAFPRGADERYIGLHDAIGADC 240
Query: 265 IGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
I LD V +A + +Q +G VQGNL +V G ++ I+DVL GP IFNLGH
Sbjct: 241 IALDDGVMAQWAADNVQIDGCVQGNLKSSHMVTGGDTLVSETRRIVDVLKGGPHIFNLGH 300
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
GITP DP+NV ++ TVR +
Sbjct: 301 GITPDADPQNVQLMIDTVREAR 322
>gi|258443855|ref|ZP_05692194.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8115]
gi|282895131|ref|ZP_06303350.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8117]
gi|257851261|gb|EEV75204.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8115]
gi|282762475|gb|EFC02616.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A8117]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 194/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G + P+W MRQAGR PEYR++++K+ + D+ + PE T
Sbjct: 3 HNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYATHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|67524551|ref|XP_660337.1| hypothetical protein AN2733.2 [Aspergillus nidulans FGSC A4]
gi|40743845|gb|EAA63031.1| hypothetical protein AN2733.2 [Aspergillus nidulans FGSC A4]
Length = 378
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 115/368 (31%), Positives = 188/368 (51%), Gaps = 31/368 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G+ ++ PPIW+MRQAGRYLPEY + + ++F + C PE +T+QP+
Sbjct: 8 KNDLLLRAAWGDKVHRPPIWVMRQAGRYLPEYHEAK-GNRDFFECCRDPEIASTITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ + + ++
Sbjct: 67 DRYEGLIDAAIIFSDILVIPQAMGMTVEMVDKKGPHFPEPLRSPTDGQYEKVMARDVDVK 126
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q + + Y+ +
Sbjct: 127 AELDYVYKAITLTRTKLNGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPKES 186
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + R+
Sbjct: 187 QALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFQDFSLPYLRHISANLPRRL 246
Query: 238 PN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
FAKGA Y L++ + N +GLDW + A ++ +QGN DP
Sbjct: 247 KEMGLEPVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAFKIANGRVTIQGNADP 305
Query: 292 MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGH---------------GITPQVDPKNV 334
L G + + V ++ G +I NLGH G+TP V+P ++
Sbjct: 306 GVLYGGREAIKQAVETMVAGFKKGKQGWIANLGHGMLFIRLYHADANFLGVTPFVNPDDL 365
Query: 335 LDLVKTVR 342
+ +
Sbjct: 366 KFYFEEIH 373
>gi|224372607|ref|YP_002606979.1| uroporphyrinogen decarboxylase [Nautilia profundicola AmH]
gi|254767700|sp|B9L8M1|DCUP_NAUPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|223588665|gb|ACM92401.1| uroporphyrinogen decarboxylase [Nautilia profundicola AmH]
Length = 340
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 185/339 (54%), Gaps = 9/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W+MRQAGRYLPEY ++R+K NFLDM PE E+T+QPI +
Sbjct: 3 FVDACFGKETEYTPVWMMRQAGRYLPEYMEVRRKIGNFLDMTRNPEVVAEVTIQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDIL + +G +RF + GP D T ++I L+ + D L Y +++
Sbjct: 63 VDAAILFSDILNLPMEMGLPLRFEKGVGPVFDKTIDTEEDIEALDSSADEKLEY---VYK 119
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ ++R++LP LIGF G+PWT+A+YM+ G K + + + Y N + LL F +
Sbjct: 120 GVKLIRERLPEEKALIGFAGSPWTIATYMVEGRGSKQYAKIKKMVYSNPMMLHRLLAFNT 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ EYL QI AG + + +FD+ G L + +F ++ + I ++ KYP+ I F
Sbjct: 180 KETIEYLSKQIDAGANAVMVFDSWGGALEKEKFFEFSWNYMKEIAKNIKAKYPHIPVILF 239
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVMIDG 304
+KG G + + + +G+DW+ P+ AL + K+ +QGN++P RL +
Sbjct: 240 SKGVGLYMDEM--DGEFDVVGVDWATPIDHALRIFKDNYTLQGNMEPTRLY-SKTATKEA 296
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I ++ IFNLGHGI P V +N V +
Sbjct: 297 VEKIAGIMKGHRHIFNLGHGILPDVPVENAKYFVNLCKE 335
>gi|67921933|ref|ZP_00515449.1| Uroporphyrinogen decarboxylase HemE [Crocosphaera watsonii WH 8501]
gi|67856149|gb|EAM51392.1| Uroporphyrinogen decarboxylase HemE [Crocosphaera watsonii WH 8501]
Length = 354
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 106/348 (30%), Positives = 182/348 (52%), Gaps = 10/348 (2%)
Query: 1 MNERKQK--ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + +L QG +++ PP+W+MRQAGRY+ YR +R K+ +F + P+ +E+
Sbjct: 1 MTGTNETPYLLRAAQGEILDRPPVWMMRQAGRYMKVYRDLRDKYPSFRERSENPDLAIEI 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNP-NIDL 115
+LQP R + D I+FSDIL +G VE++GP +D PI T+E + L P + +
Sbjct: 61 SLQPWRAFQPDGVIMFSDILTPLPGMGIPFDIVESKGPVIDPPIRTKEQVDNLRPLDPEE 120
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L ++ I + LR ++ N T++GF G+PWT+A+Y I G K++ + A+
Sbjct: 121 SLPFIKTILNT---LRAEVGNKSTVLGFVGSPWTLAAYAIEGKSSKNYAIIKNMAFSQPE 177
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L ++D A Y+ QI G V+Q+FD+ AG L ++E +A +++ V++
Sbjct: 178 ILHSFLSKIADSIAVYVRYQIDCGAQVVQLFDSWAGQLSPQDYETFALPYQQQVVRQVKQ 237
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
+P+ I + G+ +L+ + + + + LDW+V ++ + G VQGN+DP L
Sbjct: 238 THPDTPLILYISGSAGVLERMGQ-SGVDIVSLDWTVDMAEGRKRLGRGMKVQGNIDPGVL 296
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + G G I NLGHG+ NV +T +
Sbjct: 297 FGSQDFIKARILDTVRKAGRGGHILNLGHGVLVGTPEDNVRCFFETAK 344
>gi|283471104|emb|CAQ50315.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ST398]
gi|298695101|gb|ADI98323.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
ED133]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 194/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|317177563|dbj|BAJ55352.1| uroporphyrinogen decarboxylase [Helicobacter pylori F16]
Length = 339
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKVLLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELVEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + +QGNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEAAKKILGDKYVLQGNLEPTRLY-DKSALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 ERILKVMGHQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|82751486|ref|YP_417227.1| uroporphyrinogen decarboxylase [Staphylococcus aureus RF122]
gi|123548089|sp|Q2YU05|DCUP_STAAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|82657017|emb|CAI81454.1| uroporphyrinogen decarboxylase [Staphylococcus aureus RF122]
Length = 345
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 113/345 (32%), Positives = 194/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + +++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMFRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVHPETLRKVSEFVHTY 342
>gi|302142896|emb|CBI20191.3| unnamed protein product [Vitis vinifera]
Length = 1560
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 100/343 (29%), Positives = 174/343 (50%), Gaps = 5/343 (1%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP
Sbjct: 1202 DSDPLLVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQP 1261
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
++ D I+FSDIL A G E GP + PI ++E + ID L L
Sbjct: 1262 WEAFHPDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEEGLKVLHPID--LKKLH 1319
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL
Sbjct: 1320 FVGESLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALL 1379
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+ +EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P
Sbjct: 1380 SHLTQAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTP 1439
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
+ + G G +L+ + T + IGLDW+V ++ L +QGN+DP L
Sbjct: 1440 IVLYINGNGGLLERM-KGTGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPA 1498
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D + ++ G I NLGHG+ + V + R+
Sbjct: 1499 LTDEIQRVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARN 1541
>gi|54114059|gb|AAV29663.1| NT02FT1754 [synthetic construct]
Length = 344
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++RY+
Sbjct: 5 FLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQRYD 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L ++ +
Sbjct: 65 LDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYVYNA 124
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL L+D
Sbjct: 125 VKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQRLAD 182
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N + F
Sbjct: 183 ITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIVFFT 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG + + + + +G+DWSV L A + +QGN DP L Q + + V
Sbjct: 242 KGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIRETV 300
Query: 306 NAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 301 RANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|302866121|ref|YP_003834758.1| uroporphyrinogen decarboxylase [Micromonospora aurantiaca ATCC
27029]
gi|302568980|gb|ADL45182.1| uroporphyrinogen decarboxylase [Micromonospora aurantiaca ATCC
27029]
Length = 380
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + P+W MRQAGR LPEYR+IR L+ C P+ E+TLQP+R
Sbjct: 39 DSPFVRACRREPGPHTPVWFMRQAGRSLPEYREIRANVP-MLESCRRPDLVTEITLQPVR 97
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ T I + + +
Sbjct: 98 RHGVDAAILFSDIVVPVAAAGIDLDIVPGTGPVVAEPVRTAADVERITPI--GRDDVSFV 155
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L +L LIGF GAP+T+ASY++ GG + H + + Y + ++ L
Sbjct: 156 DEAVRRLVVEL-GDTPLIGFAGAPFTLASYLVEGGPSRTHAKTKALMYGDPELWHALCAR 214
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++V+ +L QI AGV +Q+FD+ AG L E ++ + ++ + I
Sbjct: 215 LAEVTLAFLQVQIDAGVSAVQLFDSWAGALSEADYRRFVLPHSTYVLGGLADA--GVPRI 272
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW PL A + + VQGNLDP L+ G V+
Sbjct: 273 HFGVGTGELLGAMGE-AGADVVGVDWRTPLDVATGRIGPDKAVQGNLDPTVLLAGWPVVE 331
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I++ + P +FNLGHG+ P+ DP+ + +V V
Sbjct: 332 TEVRRIVEQGRAAPGHVFNLGHGVLPETDPEVLTRVVALVHE 373
>gi|161510048|ref|YP_001575707.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|189083027|sp|A8YY02|DCUP_STAAT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|160368857|gb|ABX29828.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 345
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 195/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKGKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|108563010|ref|YP_627326.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPAG1]
gi|107836783|gb|ABF84652.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPAG1]
Length = 340
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 186/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 4 FIDACFRKETPYTPIWMMRQAGRYLREYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 64 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVENLKVGAYKQLNYVYDT 121
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 122 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 182 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLKFSWDYLKKISKELKKRYAHIPVILFP 241
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL+ A + L + +QGNL+P RL + +GV
Sbjct: 242 KGIGAYLDSI--DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGV 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 299 EGILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 337
>gi|282917100|ref|ZP_06324858.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
D139]
gi|283770918|ref|ZP_06343810.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
H19]
gi|282319587|gb|EFB49939.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
D139]
gi|283461065|gb|EFC08155.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
H19]
Length = 345
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 193/345 (55%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW + A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSIKQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|294658305|ref|XP_460636.2| DEHA2F06402p [Debaryomyces hansenii CBS767]
gi|202953031|emb|CAG88968.2| DEHA2F06402p [Debaryomyces hansenii]
Length = 362
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 180/352 (51%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP+W+MRQAGRYLPEY +++ K +F + C E E+T+QPI
Sbjct: 8 KNDLILRAARGEKVERPPMWIMRQAGRYLPEYHEVKGKL-DFFETCRNAEIAAEITIQPI 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
+N DAAI+FSDILVI +G + VE +GP DP+ + + L L
Sbjct: 67 EHFNGLIDAAIIFSDILVIPQVMGFEIEMVEGKGPVFVDPLRSPKDLSRVNYKPDILKGL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F++I++ R KL + L+GFCGAPWT+ YM G K + + Y+++ + L
Sbjct: 127 DWAFKAITLTRTKLNGRVPLLGFCGAPWTLLVYMTEGQGSKMFRYAKEWIYEHTEESHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L +D E+L Q+ AG ++Q+F++ A LG +EF ++ + +I + ++
Sbjct: 187 LQATTDACIEFLAQQVVAGAQMLQVFESWASELGPNEFNEFSLPYLRQISEKLPKRLQEL 246
Query: 238 ---PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
FAKGA Y L + + + + LDW A+++ + +QGNLDP
Sbjct: 247 GITEKIPLTVFAKGAWYALDSLCD-SGYDTVSLDWLYKPEDAVKVVNGRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V ++ G G +I N GHG P + P+ V +K
Sbjct: 306 TIYGSDEVISKKVEQMIKGFGGGKQNYIINFGHGTHPFMKPEKVEHFLKECH 357
>gi|295672788|ref|XP_002796940.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb01]
gi|226282312|gb|EEH37878.1| uroporphyrinogen decarboxylase [Paracoccidioides brasiliensis Pb01]
Length = 365
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 117/355 (32%), Positives = 187/355 (52%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G I PPIW+MRQAGRYLPEY +++ + +F C +PE LTLQP+
Sbjct: 9 QNDLLLRAARGEKIERPPIWVMRQAGRYLPEYHKVKGQ-HDFFACCRSPEIASTLTLQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
RY+ DAAI+FSDILV+ A+G V ++ +GP P Q LL+ ID+
Sbjct: 68 ERYSGLIDAAIIFSDILVVPQAMGMTVEMIDKKGPSFPSPLKTPSDPQYQQLLDKQIDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGFCG+PWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 -KELDYVYKAITLTRQKLKGRVPLIGFCGSPWTLLCYMVEGGGSKMFIQSKTWVYRYPAA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++++ E+L Q+ AG ++Q+FD+ AG L F ++ + I + ++
Sbjct: 187 SKVLLQKIAEICVEHLALQVEAGAQLVQVFDSWAGELSPASFAEFSLPYLRYISVHLPKR 246
Query: 237 Y-----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLD 290
FAKGA Y L + + + LDW + A+++ K +QGN D
Sbjct: 247 LAEMGQERVPMTVFAKGAWYALDVLCE-SGYDVVSLDWLQDPAEAVKVAKGRVTLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ +I NLGHG+TP VDP+++ + +
Sbjct: 306 PGCLYGSREAITAVVENMVKGFWDGRRQGWIANLGHGVTPFVDPEDLKFYFQEIH 360
>gi|219848203|ref|YP_002462636.1| uroporphyrinogen decarboxylase [Chloroflexus aggregans DSM 9485]
gi|254767690|sp|B8G821|DCUP_CHLAD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|219542462|gb|ACL24200.1| uroporphyrinogen decarboxylase [Chloroflexus aggregans DSM 9485]
Length = 356
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 190/347 (54%), Gaps = 9/347 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + L + ++ PIWLMRQAGRY+PEYR +R+++ FL M TPE E+TLQPI
Sbjct: 2 RDRFLRACRRQPVDRTPIWLMRQAGRYMPEYRAVRERYG-FLQMVKTPEIAAEVTLQPIA 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAI+F+DIL + LG + + + EGP + +PI D +
Sbjct: 61 AFGVDAAIIFADILPPLEGLGLRLTYEKGEGPVIHNPIRHPHDVATLHPCDPR-ETVAYT 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +++++L + LIGF GAP+T+ASY I GG K++ + F Y+ A++ L++
Sbjct: 120 LDAVRLVKRELNG-LPLIGFSGAPFTLASYAIEGGGSKEYRLTKRFMYEQPTAWHDLMER 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA--K 241
L + AEYLIAQ+ AG D +QIFD+ AG L ++ Y R +++ VR + A
Sbjct: 179 LGTLVAEYLIAQVEAGADAVQIFDSWAGTLAPADYRAYVLRHTQNVVATVRARLGAAAPP 238
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F + R+L ++ +G+DW + L A + E VQGNLDPM L ++
Sbjct: 239 IIYFGTDMAGLAGELRQL-GTDVLGVDWRIDLDVAWAQYGYEHAVQGNLDPMTLFAPPEL 297
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ IL G P IFNLGHGI + ++V LV+ V+S +
Sbjct: 298 IASRAREILQRAGGRPGHIFNLGHGILTETPVEHVRYLVEFVQSYPL 344
>gi|302333499|gb|ADL23692.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|323438515|gb|EGA96264.1| uroporphyrinogen decarboxylase [Staphylococcus aureus O11]
gi|323441350|gb|EGA99011.1| uroporphyrinogen decarboxylase [Staphylococcus aureus O46]
Length = 345
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 113/345 (32%), Positives = 194/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L D+S +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDISVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|307326446|ref|ZP_07605641.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
gi|306887854|gb|EFN18845.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
Length = 384
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 135/346 (39%), Positives = 203/346 (58%), Gaps = 5/346 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+ +L L G PPIWLMRQAGRYLPEY +R+ + +C +PE+ VE+TLQP+R
Sbjct: 21 KKLLLRALAGERTERPPIWLMRQAGRYLPEYHDVREAAGGMVGLCNSPEHAVEVTLQPLR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILF+D+ IA ALG+ + + +GP + PI + + L PI
Sbjct: 81 RFTLDAAILFADLPQIAAALGQTLEYRVGDGPVLTPPIRSTSDITEFLSASRLHEELAPI 140
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISG-GFIKDHGQNRVFAYQNSRAFNWLLD 182
++++ L + LP+ +TLIG+ GAPWTVA+YM+ G G +H + +A + F L+D
Sbjct: 141 YETVRQLTRALPDEVTLIGYAGAPWTVATYMVEGRGGGPEHSIVKQWALSDPEGFQPLID 200
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + E+L QI AG + IQ+F++ AG L + F+ + V I++A++ K+P+
Sbjct: 201 LLTAATIEFLDRQIQAGAEAIQLFESWAGILPDPLFQRWCVTPVAAIVAALKAKHPSVPI 260
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE---GPVQGNLDPMRLVVGNQ 299
I+F +GAG K + T + +GLD +VP+ +A + + VQGNLDP LV G
Sbjct: 261 IAFPRGAGLAYKGFAEATGVDCVGLDSTVPVEWAAQKVQHELGRCVQGNLDPQLLVAGGP 320
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + IL+ L GPF+FNLGHGI P++V L + VRS
Sbjct: 321 ALHAETDRILNALSGGPFVFNLGHGIVKTTPPEHVAALAQQVRSWS 366
>gi|258423111|ref|ZP_05686005.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9635]
gi|257846675|gb|EEV70695.1| uroporphyrinogen decarboxylase [Staphylococcus aureus A9635]
Length = 345
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 194/345 (56%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKISQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTY 342
>gi|297191332|ref|ZP_06908730.1| uroporphyrinogen decarboxylase [Streptomyces pristinaespiralis ATCC
25486]
gi|197720657|gb|EDY64565.1| uroporphyrinogen decarboxylase [Streptomyces pristinaespiralis ATCC
25486]
Length = 353
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 174/343 (50%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+R
Sbjct: 15 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVTEITLQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP + +PI T+ L DL + + +
Sbjct: 74 RHKVDAAIFFSDIVVPLKAIGIDLDIKPGVGPVVAEPIRTRAD--LARLRDLTPDDVRYV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +L +L LIGF GAP+T+ASY++ GG ++H + Y + + + LLD
Sbjct: 132 TEAMGMLTDELGP-TPLIGFAGAPFTLASYLVEGGPSRNHENTKALMYGDPQLWADLLDR 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 191 LAEITSAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASEKVFEAVASY--GVPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L + +
Sbjct: 249 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFSSREAVE 307
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD +FNLGHG+ P DP + LV V +
Sbjct: 308 SKTREVLDAAAGLEGHVFNLGHGVLPTTDPDALTRLVAYVHEQ 350
>gi|38258941|sp|Q8CNS0|DCUP_STAES RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 353
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 108/344 (31%), Positives = 190/344 (55%), Gaps = 7/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P
Sbjct: 12 SKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTHLP 70
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ Y DAA+L+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 71 VDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRD-VP 129
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L+
Sbjct: 130 YVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFALM 188
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 189 NHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-DVP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ V+
Sbjct: 248 IILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSILLAPWDVI 306
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL L G +IFNLGHG+ P+V P+ + + + V +
Sbjct: 307 ESRLKDILNQGLNRGKYIFNLGHGVFPEVKPETLRKVTEFVHNY 350
>gi|169826007|ref|YP_001696165.1| uroporphyrinogen decarboxylase [Lysinibacillus sphaericus C3-41]
gi|168990495|gb|ACA38035.1| Uroporphyrinogen decarboxylase [Lysinibacillus sphaericus C3-41]
Length = 362
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 110/347 (31%), Positives = 177/347 (51%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L +G P+W MRQAGR EYR I++K+ + ++ + PE +T
Sbjct: 14 MTTFNDTLLRAARGEKTTHTPVWYMRQAGRSQAEYRAIKEKY-SLEEITHQPELCAYVTR 72
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAAIL+ DI+ +G +V+ GP + +PI + + +
Sbjct: 73 LPVENYNVDAAILYKDIVTPLPGIGIDVKIKAGVGPVISNPIRSVADVDNLGEFNAK-EH 131
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++I IL ++ ++ LIGF GAP+T+ASYMI GG +++ + + F +A+
Sbjct: 132 TPFVLETIKILTEE-QLNVPLIGFAGAPFTLASYMIEGGPSRNYNKTKSFMVSEPQAWFA 190
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+D+ + AQI AG IQ+FD+ G L ++ + + RI + ++++ N
Sbjct: 191 LMDKLADMIIADVTAQIKAGAKAIQVFDSWVGALNVEDYRVFIKPIMTRIFAELQKE--N 248
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ K + L + +GLDW +P+ A PVQGNLDP L+
Sbjct: 249 VPLIQFGVGASHLAKEWNDLP-IDVVGLDWRLPIKEARTNGITKPVQGNLDPSLLLADWS 307
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I+D L IFNLGHG+ P+VDP + L +
Sbjct: 308 VIEKRTKDIIDQGLEMPGHIFNLGHGVFPEVDPAVLKRLTTLIHEYS 354
>gi|311742290|ref|ZP_07716099.1| uroporphyrinogen decarboxylase [Aeromicrobium marinum DSM 15272]
gi|311313918|gb|EFQ83826.1| uroporphyrinogen decarboxylase [Aeromicrobium marinum DSM 15272]
Length = 345
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 112/349 (32%), Positives = 177/349 (50%), Gaps = 12/349 (3%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M L +G + P+W MRQAGR LPEY +R+ L+ C+ + VE+
Sbjct: 1 MTTTLIDSPFLRAARGEQPDHTPVWFMRQAGRSLPEYLALREGVP-MLESCFRTDMVVEI 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
TLQP+RRY DAAI FSDI+V A+G ++ V GP + +P+ E L D+
Sbjct: 60 TLQPVRRYGVDAAIFFSDIVVPLKAIGVDLDIVPGTGPVVAEPVRRPE--QLAQLRDVEP 117
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + + +++ L +L LIGF GAP+T+ASY+I GG +DH + Y + +
Sbjct: 118 DDVTAVTDAVTALVGEL-GSTPLIGFAGAPFTLASYLIEGGPSRDHRLTKQMMYAEPQLW 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++ ++ ++L Q+ AG +Q+FD+ AG L ++E Y ++ +V
Sbjct: 177 HALLGRIAAIAGQFLRLQVEAGASAVQLFDSWAGALSLADYERYVRPHSAAVLESVADL- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
I F G G +L + ++ +G+DW VPL A + VQGNLDP +
Sbjct: 236 -GVPRIHFGVGTGELLGSMGE-AGADVVGVDWRVPLDEAVRRVGPGRSVQGNLDPTVVFA 293
Query: 297 GNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ +++ + IFNLGHG+ P DP + LV V +
Sbjct: 294 PTEVVHAEAARVIEAGRAAQGHIFNLGHGVLPATDPDALARLVDFVHAY 342
>gi|224437755|ref|ZP_03658702.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
gi|313144201|ref|ZP_07806394.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
gi|313129232|gb|EFR46849.1| uroporphyrinogen decarboxylase [Helicobacter cinaedi CCUG 18818]
Length = 339
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 132/339 (38%), Positives = 186/339 (54%), Gaps = 9/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIWLMRQAGRYL EYR R K FLD+C E+TLQP+ +
Sbjct: 3 FIDACFRKKTPYTPIWLMRQAGRYLSEYRATRAKAGGFLDLCKNVNLATEVTLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G + F+ EGP + ITT E L Y ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLPLEFLSGEGPHFNRTITTLEDVKALGCAKDKLGY---VYDA 119
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+S +R KLP LIGFCG+PWT+A+YMI G K + +++ Y+ + LL+ LSD
Sbjct: 120 VSSIRSKLPKDKALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKQPQVLKALLERLSD 179
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL QI AG + +QIFD+ AG L + + ++ + I ++ KYP+ + F
Sbjct: 180 ELKAYLEGQIQAGANAVQIFDSWAGALEQEAYLEFSWGYMKDIAKYIKGKYPHIPVMLFP 239
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + G+DW P++ A E L K+ +QGNL+P RL M GV
Sbjct: 240 KGIGAYLDKI--DGEFDVFGVDWGTPMNMAKEKLGKKYVLQGNLEPSRLY-DVDSMRRGV 296
Query: 306 NAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL+++G G IFNLGHG+ P + +N ++LVK VR
Sbjct: 297 KEILEIMGKDGGHIFNLGHGMLPDLPRENAIELVKMVRE 335
>gi|30019223|ref|NP_830854.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 14579]
gi|206967828|ref|ZP_03228784.1| uroporphyrinogen decarboxylase [Bacillus cereus AH1134]
gi|218233350|ref|YP_002365836.1| uroporphyrinogen decarboxylase [Bacillus cereus B4264]
gi|228938305|ref|ZP_04100918.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228951531|ref|ZP_04113636.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228971183|ref|ZP_04131814.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|229078374|ref|ZP_04210937.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock4-2]
gi|229189264|ref|ZP_04316285.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10876]
gi|38257411|sp|Q81GW6|DCUP_BACCR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723866|sp|B7HGF9|DCUP_BACC4 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29894766|gb|AAP08055.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 14579]
gi|206736748|gb|EDZ53895.1| uroporphyrinogen decarboxylase [Bacillus cereus AH1134]
gi|218161307|gb|ACK61299.1| uroporphyrinogen decarboxylase [Bacillus cereus B4264]
gi|228594164|gb|EEK51962.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10876]
gi|228704915|gb|EEL57338.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock4-2]
gi|228788510|gb|EEM36458.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228808096|gb|EEM54610.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228821342|gb|EEM67354.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 348
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+ I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|300784549|ref|YP_003764840.1| uroporphyrinogen-III decarboxylase [Amycolatopsis mediterranei U32]
gi|299794063|gb|ADJ44438.1| uroporphyrinogen-III decarboxylase [Amycolatopsis mediterranei U32]
Length = 356
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 117/342 (34%), Positives = 176/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L +G P+W MRQAGR LPEYR +R+ LD C+ PE E+TLQP+R
Sbjct: 21 EAPFLAAARGERPARTPVWFMRQAGRSLPEYRALREGVP-MLDACFDPEMLAEITLQPVR 79
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + P+ P ++ + +
Sbjct: 80 RHGVDAAILFSDIVVPLKAAGVDIDIVPGTGPVVATPVRDLAAVKALPELE--PEQVSKV 137
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ +L +L LIGF GAP+T+ASY+I GG ++H + + + ++ L
Sbjct: 138 ADGVRLLVARLGG-TPLIGFAGAPFTLASYLIEGGPSRNHEHTKALMHTSPEVWHELAGR 196
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L AQ+ AGVD +Q+FD+ AG L E ++ + ++++ V I
Sbjct: 197 LADLALTFLRAQLDAGVDAVQLFDSWAGALSERDYREFVLPHSAKVLAGVAEY--GVPRI 254
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L R ++ +G+DW +PL A L VQGNLDP L V+
Sbjct: 255 HFGVGTGELLAAMRD-AGADVVGVDWRIPLDEAVRRLGGRAVVQGNLDPALLHASWPVLA 313
Query: 303 DGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I++ + IFNLGHG+ P VDP + +V V
Sbjct: 314 AEVRRIVEEGKAAEGHIFNLGHGVLPGVDPDVLTRVVGLVHE 355
>gi|308172996|ref|YP_003919701.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens DSM
7]
gi|307605860|emb|CBI42231.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens DSM
7]
gi|328552640|gb|AEB23132.1| uroporphyrinogen decarboxylase [Bacillus amyloliquefaciens TA208]
Length = 353
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 115/354 (32%), Positives = 186/354 (52%), Gaps = 19/354 (5%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R L+ +G P+W MRQAGR PEYR++++K+ +++ + PE
Sbjct: 1 MSKREAFNDTFLKAARGEKAGHVPVWYMRQAGRSQPEYRKLKEKYG-LVEITHQPELCAY 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ +G +V GP +D P+ + ++ LNP
Sbjct: 60 VTRLPVEQYGVDAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIDKLGELNPE 119
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D + + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F +
Sbjct: 120 QD-----VPYVLETIRLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHS 173
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
+A+ L+D L+D+ Y AQI+AG IQIFD+ G L ++ Y + RI
Sbjct: 174 MPQAWQMLMDKLADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRMYIKPVMDRIFRE 233
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + I F GA ++ ++ L + +GLDW + + A + VQGNLDP
Sbjct: 234 LSAE--QVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLSIDDARKQGITKTVQGNLDPS 290
Query: 293 RLVVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L+ +V+ + AILD + + FIFNLGHG+ P V+P + L V
Sbjct: 291 LLLAPWEVIEEKAKAILDQGMKTDRFIFNLGHGVFPDVNPDTLKKLTAFVHEYS 344
>gi|299115710|emb|CBN74275.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 422
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 101/344 (29%), Positives = 173/344 (50%), Gaps = 3/344 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+L +G + P+W+MRQAGR++ EYR + +K F + TPE + E++LQP
Sbjct: 80 TTDPLLLRAARGEKVERVPVWMMRQAGRHIKEYRDLVQKHPTFRERSETPELSTEISLQP 139
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
R Y D ILFSDIL +G + E GP++ P+ T + ID
Sbjct: 140 WRNYKTDGVILFSDILTPLPGMGIDFTIEEKAGPKIPPMRTWDSMKKMHPIDPE-KACPF 198
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q+++ LR + N T++GF G P+T+A+YM+ G K++ + + A+ + + +L
Sbjct: 199 VGQTLNELRGVVGNEATVLGFVGCPYTLATYMVEGKTSKEYLEIKKMAFLEPKLLHAMLK 258
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D +Y Q+ +G VIQ+FD+ AG L +++ +AA +I ++ +P
Sbjct: 259 SLADSIGDYANYQVDSGAQVIQVFDSWAGHLSPKDYDTFAAPYQRMVIEKIKAVHPEVPV 318
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I + +G +L+ + + + LDW+V + A + + +QGNLDP L + +
Sbjct: 319 IIYINKSGALLERMA-TSGVDIVSLDWTVTVPEARKRIGDDIGIQGNLDPAILHGDHATI 377
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G + NLGHGI N + TV++ +
Sbjct: 378 KERTEEILRDGGGRNHVMNLGHGIDAGTPEDNAAFFIDTVKNFR 421
>gi|71899203|ref|ZP_00681366.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
gi|71731061|gb|EAO33129.1| Uroporphyrinogen decarboxylase HemE [Xylella fastidiosa Ann-1]
Length = 354
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 10/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L L+ + ++ PIWLMRQAGRYLPEYR R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALRRDTVDRTPIWLMRQAGRYLPEYRAARQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+ DAAILFSDIL+I DA+G + F+E EGPR+ + + L +
Sbjct: 63 RRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + + A+ + LL+
Sbjct: 123 MDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYARIKAMAFNAPDLLHQLLNT 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
++D YL AQ AG +Q+FDT G L + ++ + RI + R +
Sbjct: 183 VTDAVISYLAAQRAAGAQALQVFDTWGGILSPRMYRTFSLPYLTRIARELERGTGTEHTP 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
+ F KG G + ++ + A+G+DW++ L A + +QGNLDP L
Sbjct: 243 LVLFGKGNGPYIAELA-MSGTEAVGVDWTIELEDAARRSNGQVALQGNLDPATLYGTPNN 301
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+ P ++P +V LV+ V+
Sbjct: 302 IAHEVQRTLDSYAAGNGGSREGHVFNLGHGMRPGMNPDHVSALVEAVQ 349
>gi|229101770|ref|ZP_04232487.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-28]
gi|228681718|gb|EEL35878.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-28]
Length = 348
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V AILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKAILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|229171825|ref|ZP_04299396.1| Uroporphyrinogen decarboxylase [Bacillus cereus MM3]
gi|228611645|gb|EEK68896.1| Uroporphyrinogen decarboxylase [Bacillus cereus MM3]
Length = 348
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 184/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+ I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKV--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|210134806|ref|YP_002301245.1| uroporphyrinogen decarboxylase [Helicobacter pylori P12]
gi|226696377|sp|B6JLI7|DCUP_HELP2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|210132774|gb|ACJ07765.1| uroporphyrinogen decarboxylase [Helicobacter pylori P12]
Length = 339
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 119/339 (35%), Positives = 184/339 (54%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY++ RKK +FL++C + E+TLQP+
Sbjct: 3 FIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G N+ F+ +GP + IT ++ + L ++ +
Sbjct: 63 VDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETIT--DLKSVESLKVGAYKQLNYVYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
IS R+KL LIGFCG+PWT+A+YMI G K + +++ Y LL+ LS
Sbjct: 121 ISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSL 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
EYL QI AGV+ + IFD+ A L + + ++ + +I ++++Y + I F
Sbjct: 181 ELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRYAHIPVILFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KG G L + + + G+DW PL A ++ + + GNL+P RL + +GV
Sbjct: 241 KGIGAYLDSI--DGEFDVFGVDWGTPLEVAKKILGDKYVLHGNLEPTRLY-DKNALEEGV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G+ IFNLGHG+ P + +N LV+ V ++
Sbjct: 298 EKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAK 336
>gi|27468431|ref|NP_765068.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis ATCC
12228]
gi|27315978|gb|AAO05112.1|AE016749_58 uroporphyrinogen decarboxylase [Staphylococcus epidermidis ATCC
12228]
Length = 359
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 108/344 (31%), Positives = 190/344 (55%), Gaps = 7/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ IL+ ++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T P
Sbjct: 18 SKNDTILKAIKGESTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTHLP 76
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+ Y DAA+L+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 77 VDNYQTDAAVLYKDIMTPLKPIGVDVEIKSGIGPVISNPIQTVKDVERLSQIDPKRD-VP 135
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L+
Sbjct: 136 YVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEETWFALM 194
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L D+S +Y++AQ+ AG ++IQIFD+ G L ++ Y ++ ++IS ++ Y +
Sbjct: 195 NHLVDISIDYVVAQVEAGAEIIQIFDSWVGALNVKDYRYYIKPAMNKLISGIKAYY-DVP 253
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ V+
Sbjct: 254 IILFGVGASHLINEWNDLP-IDVLGLDWRTTIKQADKMGVNKAIQGNLDPSILLAPWDVI 312
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL L G +IFNLGHG+ P+V P+ + + + V +
Sbjct: 313 ESRLKDILNQGLNRGKYIFNLGHGVFPEVKPETLRKVTEFVHNY 356
>gi|162458615|ref|NP_001105610.1| uroporphyrinogen decarboxylase, chloroplastic precursor [Zea mays]
gi|6014938|sp|O81220|DCUP_MAIZE RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
Short=UPD; Short=URO-D; Flags: Precursor
gi|3420233|gb|AAC31883.1| uroporphyrinogen decarboxylase [Zea mays]
Length = 393
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 9/341 (2%)
Query: 10 EVLQGNV-----INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
G + PP+WLMRQAGRY+ Y+ + +++ +F + + VE++LQP +
Sbjct: 52 RAAAGERNQREEVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWK 111
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ D ILFSDIL + V+ +GP + DP+ T + ++ +
Sbjct: 112 VFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREF-VPEEWVPYV 170
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q+++ILR+++ N ++GF GAP+T+ASY + GG K+ + A+ + LL
Sbjct: 171 GQALNILRQEVKNEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKKMAFSEPAILHNLLQK 230
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ A Y+ Q G +QIFD+ A L +FE ++ + +I+ +VR +P+ I
Sbjct: 231 FTTSMANYIKYQADNGAQAVQIFDSWATELSPADFEEFSLPYLKQIVDSVRETHPDLPLI 290
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
+A G+G +L+ LT + + LDW+V ++ L VQGN+DP L + +
Sbjct: 291 LYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKRLGSNTAVQGNVDPGVLFGSKEFIT 349
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + G+ + NLGHGI +NV + +
Sbjct: 350 RRIYDTVQKAGNVGHVLNLGHGIKVGTPEENVAHFFEVAKG 390
>gi|326386165|ref|ZP_08207789.1| uroporphyrinogen decarboxylase [Novosphingobium nitrogenifigens DSM
19370]
gi|326209390|gb|EGD60183.1| uroporphyrinogen decarboxylase [Novosphingobium nitrogenifigens DSM
19370]
Length = 341
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 136/340 (40%), Positives = 203/340 (59%), Gaps = 4/340 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+LE L+G + P+WLMRQAGRYLPEYR +R FL++ Y E E+TLQPIRR+
Sbjct: 4 PLLETLKGANLATRPVWLMRQAGRYLPEYRALRADKGGFLELVYDSEAAAEITLQPIRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G+N++F+ EGP + P + + + LL I+ +
Sbjct: 64 GFDGAILFSDILIVPHAMGQNLQFLAGEGPHLSP---RLLDAALDTLVAVPERLLAIYDT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
++ +R L TL+GF G+PWTVA+YM++G +D + R AY++ AF ++D + +
Sbjct: 121 VARVRGALGPETTLLGFAGSPWTVATYMVAGEGSRDQHETRALAYRDPAAFQAIIDAIVE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V+ +YL Q+ AG + +Q+FD+ AG L EFE + RI++A++ ++P I F
Sbjct: 181 VTIDYLSGQVAAGAEGLQLFDSWAGTLAPAEFERWVIAPNARIVAAMKERHPEIPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y R T +A+G+D ++ +A EG PVQGNLDP+ L+ G ++
Sbjct: 241 KGAGEKLPAYARETGVDAVGIDETIDPLWAAANLPEGLPVQGNLDPLLLLAGGDMLETRA 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
A+LD P +FNLGHGI +V L+ VR+ K
Sbjct: 301 CAVLDAFADRPHVFNLGHGIGQFTPIAHVERLLDVVRNWK 340
>gi|308799229|ref|XP_003074395.1| uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116000566|emb|CAL50246.1| uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 394
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 105/342 (30%), Positives = 167/342 (48%), Gaps = 3/342 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+L +G + P+WLMRQAGRY+ E+R K+ F TPE +EL++QP
Sbjct: 45 TSDPILLRAARGEDVERSPVWLMRQAGRYMAEFRAYSTKYG-FRHRSETPEIAIELSMQP 103
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
R Y D I+FSDIL ALG V+ +GP + + + + +D L
Sbjct: 104 WRAYKPDGVIMFSDILTPLPALGIEFDVVKGKGPVVHQVKSMDDVRAMKTLDDPEKSLPF 163
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + +S LRK++ T++GF G+PWT+A+Y + G + + QN + LD
Sbjct: 164 VREILSSLRKEIDGQSTMLGFIGSPWTLAAYAMEGSSDRHLVTTKQIMTQNPELLHAFLD 223
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D Y+ QI +G V+QIFD+ A L +F ++ RII+ V+ ++P
Sbjct: 224 KLADALGVYVCYQIESGAQVVQIFDSWAHHLSPQQFLEFSHPYNERIIAYVKERHPETPL 283
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
I A G L ++ T ++ IGLDW+ + A + + +QGN+DPM L + +
Sbjct: 284 IFHANGGCGKLNELKKST-ADVIGLDWNTSMVDARAVLGPDRVLQGNMDPMYLFASPERI 342
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + GS I N+GHG+ ++V R+
Sbjct: 343 KQEVANCVRDAGSSKHILNVGHGVVQGTPEESVGHFCDAARA 384
>gi|323135824|ref|ZP_08070907.1| uroporphyrinogen decarboxylase [Methylocystis sp. ATCC 49242]
gi|322398915|gb|EFY01434.1| uroporphyrinogen decarboxylase [Methylocystis sp. ATCC 49242]
Length = 324
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 151/324 (46%), Positives = 208/324 (64%), Gaps = 3/324 (0%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
WLMRQAGRYLPEYR +R K K+FLD CYTP E+TLQP+RR++FDAAILFSDILVI D
Sbjct: 2 WLMRQAGRYLPEYRALRAKAKSFLDFCYTPAMAAEVTLQPVRRFHFDAAILFSDILVIPD 61
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
A+G+ V F GPR+DPI T E D + L P+F++I ++ +LP + IG
Sbjct: 62 AMGQTVSFETGSGPRLDPIETPEGISRLGAFD--ITKLSPVFETIDRVKSELPADVAFIG 119
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
FCGAPWTVASYMI+G D R+FA+++ AF+ L+D L D S +YL+ QI AGV+V
Sbjct: 120 FCGAPWTVASYMIAGQGTPDQAPARLFAFRHPEAFSSLIDRLVDASVDYLVRQIDAGVEV 179
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFD+ AG L +EFE ++AR + R+I+A++ + PN I+F +GA L + +
Sbjct: 180 VQIFDSWAGVLPANEFEAWSARPIARMIAALKTQRPNVPVIAFVRGADAQLPRLTKTLHA 239
Query: 263 NAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ GLD ++ +A +QGNLDP+ L+ G + +++IL P IFNL
Sbjct: 240 DGYGLDTALDPKWAAANTAANVCLQGNLDPLALIAGGAALDREIDSILGAFAGRPHIFNL 299
Query: 322 GHGITPQVDPKNVLDLVKTVRSEK 345
GHGI PQ ++V LV+ VR +
Sbjct: 300 GHGILPQTPIEHVERLVERVRGAR 323
>gi|294815680|ref|ZP_06774323.1| Uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
gi|294328279|gb|EFG09922.1| Uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
Length = 402
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+R
Sbjct: 64 DSAFLRACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMRPELVKEITLQPVR 122
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP + +P ++ L DL + +
Sbjct: 123 RHGVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVVAEPFRSRAD--LARLRDLTPEDVWYV 180
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG ++H + + + + LLD
Sbjct: 181 TEAIGLLTAELGG-TPLIGFAGAPFTLASYLVEGGPSRNHEHTKALLHSDPELWADLLDR 239
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 240 LAEITSAFLKVQIEAGASAVQLFDSWVGALAPVDYRRSVMPASVKVFDAVAGY--GVPRI 297
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 298 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAGTRAVE 356
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L +FNLGHG+ P DP + LV V
Sbjct: 357 AMTDEVLRAAAGLEGHVFNLGHGVLPTTDPDALTRLVSYVHE 398
>gi|328911047|gb|AEB62643.1| uroporphyrinogen III decarboxylase [Bacillus amyloliquefaciens LL3]
Length = 357
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 115/354 (32%), Positives = 186/354 (52%), Gaps = 19/354 (5%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M++R L+ +G P+W MRQAGR PEYR++++K+ +++ + PE
Sbjct: 5 MSKREAFNDTFLKAARGEKAGHVPVWYMRQAGRSQPEYRKLKEKYG-LVEITHQPELCAY 63
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT----QEIYLLNPN 112
+T P+ +Y DAAIL+ DI+ +G +V GP +D P+ + ++ LNP
Sbjct: 64 VTRLPVEQYGVDAAILYKDIMTPLPYIGVDVEIKNGIGPVIDQPVRSAADIDKLGELNPE 123
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
D + + ++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F +
Sbjct: 124 QD-----VPYVLETIRLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMHS 177
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
+A+ L+D L+D+ Y AQI+AG IQIFD+ G L ++ Y + RI
Sbjct: 178 MPQAWQMLMDKLADMIIVYAKAQINAGAKAIQIFDSWVGALNREDYRMYIKPVMDRIFRE 237
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + I F GA ++ ++ L + +GLDW + + A + VQGNLDP
Sbjct: 238 LSAE--QVPLIMFGVGASHLAGDWHDLP-LDVVGLDWRLSIDDARKQGITKTVQGNLDPS 294
Query: 293 RLVVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L+ +V+ + AILD + + FIFNLGHG+ P V+P + L V
Sbjct: 295 LLLAPWEVIEEKAKAILDQGMKTDRFIFNLGHGVFPDVNPDTLKKLTAFVHEYS 348
>gi|196037564|ref|ZP_03104875.1| uroporphyrinogen decarboxylase [Bacillus cereus NVH0597-99]
gi|301052719|ref|YP_003790930.1| uroporphyrinogen decarboxylase [Bacillus anthracis CI]
gi|196031806|gb|EDX70402.1| uroporphyrinogen decarboxylase [Bacillus cereus NVH0597-99]
gi|300374888|gb|ADK03792.1| uroporphyrinogen decarboxylase [Bacillus cereus biovar anthracis
str. CI]
Length = 348
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGIHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|42780242|ref|NP_977489.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10987]
gi|49480147|ref|YP_035323.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52144241|ref|YP_082587.1| uroporphyrinogen decarboxylase [Bacillus cereus E33L]
gi|196036435|ref|ZP_03103831.1| uroporphyrinogen decarboxylase [Bacillus cereus W]
gi|217958652|ref|YP_002337200.1| uroporphyrinogen decarboxylase [Bacillus cereus AH187]
gi|228944796|ref|ZP_04107159.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|81689078|sp|Q63ES5|DCUP_BACCZ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81696923|sp|Q6HM98|DCUP_BACHK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|81699945|sp|Q73C99|DCUP_BACC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171473047|sp|A0RAS3|DCUP_BACAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226723867|sp|B7HZJ8|DCUP_BACC7 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|42736161|gb|AAS40097.1| uroporphyrinogen decarboxylase [Bacillus cereus ATCC 10987]
gi|49331703|gb|AAT62349.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51977710|gb|AAU19260.1| uroporphyrinogen decarboxylase [Bacillus cereus E33L]
gi|195990909|gb|EDX54881.1| uroporphyrinogen decarboxylase [Bacillus cereus W]
gi|217064787|gb|ACJ79037.1| uroporphyrinogen decarboxylase [Bacillus cereus AH187]
gi|228814824|gb|EEM61082.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|324325196|gb|ADY20456.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 348
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|228984254|ref|ZP_04144436.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775541|gb|EEM23925.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 348
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|254503714|ref|ZP_05115865.1| uroporphyrinogen decarboxylase [Labrenzia alexandrii DFL-11]
gi|222439785|gb|EEE46464.1| uroporphyrinogen decarboxylase [Labrenzia alexandrii DFL-11]
Length = 318
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 154/318 (48%), Positives = 204/318 (64%), Gaps = 2/318 (0%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R K KNFLD CYTP+ E+TLQPIRRY FDA+ILFSDI V+ DA+
Sbjct: 1 MRQAGRYLPEYREVRAKAKNFLDFCYTPDLATEVTLQPIRRYGFDASILFSDIFVVPDAI 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G VRF E GP ++P++ I L D ++L P+ +++S LR +LP TL+GFC
Sbjct: 61 GYPVRFEEGRGPVLEPLSADLIDRL--EQDRAEDHLKPVIETVSRLRAELPEETTLLGFC 118
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GA WTVA Y ++G +D RV AY++ +D L S YLI Q+ AG D +Q
Sbjct: 119 GACWTVACYSVAGHTTQDQVAARVGAYKDPDLMQRFIDELVTASISYLIRQLDAGADALQ 178
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
IFDT AG L + F+ + +I+ V+ P+AK I F K + ++ Y + T +A
Sbjct: 179 IFDTWAGVLDDTGFQRWCIEPTRKIVDGVKAARPDAKIIGFPKASSARMQAYIKGTGVDA 238
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
+G DW+ P ALE+QK+ P+QGNLDPMRLV G + + DGV IL GPFIFNLGHG
Sbjct: 239 VGFDWTAPDHLALEIQKQVPIQGNLDPMRLVAGGKALEDGVQHILKTFDKGPFIFNLGHG 298
Query: 325 ITPQVDPKNVLDLVKTVR 342
+TP DP NV +V+ V+
Sbjct: 299 VTPDADPDNVARMVEMVK 316
>gi|118476672|ref|YP_893823.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis str. Al
Hakam]
gi|225863029|ref|YP_002748407.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB102]
gi|118415897|gb|ABK84316.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis str. Al
Hakam]
gi|225787488|gb|ACO27705.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB102]
Length = 356
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 14 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 73 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 132 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 191 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 249 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 307
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 308 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 350
>gi|187931003|ref|YP_001890987.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238058037|sp|B2SEW4|DCUP_FRATM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|187711912|gb|ACD30209.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 344
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 192/346 (55%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYKEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A + +QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|229541442|ref|ZP_04430502.1| uroporphyrinogen decarboxylase [Bacillus coagulans 36D1]
gi|229325862|gb|EEN91537.1| uroporphyrinogen decarboxylase [Bacillus coagulans 36D1]
Length = 351
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 119/349 (34%), Positives = 192/349 (55%), Gaps = 10/349 (2%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M ++ +L+ +G P+W MRQAGR PEYR++++K+ + D+ + PE +
Sbjct: 1 MKKKILNDSLLKAARGEQTGRVPVWYMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
T P+ Y+ DAAIL+ DI+ ALG V ++ GP + +P+++ + +
Sbjct: 60 TRLPVEHYDVDAAILYKDIMTPLPALGVEVEILKGAGPVIHNPVSSLKDVEKLGELHPE- 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + ++I +L ++ + LIGF GAP+T+ASYMI GG KD+ + + F Y +A+
Sbjct: 119 EDVPYVLETIRLLTEE-QLAVPLIGFSGAPFTLASYMIEGGPSKDYRKTKAFMYTEPKAW 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L++ L+D+ Y+ AQI AG IQIFD+ G L ++ Y + RI +A+R +
Sbjct: 178 FALMEKLADMIIVYVKAQIKAGASAIQIFDSWVGALNAADYRYYMKPVMERIFTALRTE- 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
NA FI F GAG++ + L + +GLDW +P+ A L +QGNLDP L+
Sbjct: 237 -NAPFILFGVGAGHLALEWNSLP-IDVVGLDWRLPIQKARALGVTKAIQGNLDPAVLLSP 294
Query: 298 NQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+V+ + AILD + +IFNLGHG+TP V P+ + L +
Sbjct: 295 WEVIQEKAAAILDEGMAQPGYIFNLGHGVTPDVRPETLKRLTTFIHEYS 343
>gi|229016368|ref|ZP_04173312.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1273]
gi|229022598|ref|ZP_04179124.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1272]
gi|228738689|gb|EEL89159.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1272]
gi|228744924|gb|EEL94982.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1273]
Length = 348
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 182/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P W MRQAGR PEYR+I++K + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEK-HSLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR+ I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRIFIKPAMERIFAEVRKM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|229028856|ref|ZP_04184957.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1271]
gi|228732427|gb|EEL83308.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH1271]
Length = 348
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|228906808|ref|ZP_04070677.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 200]
gi|228852812|gb|EEM97597.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 200]
Length = 348
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|224145917|ref|XP_002325811.1| predicted protein [Populus trichocarpa]
gi|222862686|gb|EEF00193.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 100/351 (28%), Positives = 176/351 (50%), Gaps = 14/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYL----------PEYRQIRKKFKNFLDMCYTPEY 54
+ +L ++G + PP+WLMRQAGR Y+ I +K +F + +
Sbjct: 52 EPLLLNAVRGEDVERPPVWLMRQAGRNWFTSYAHVSFKMSYQIICEKHPSFRERSENVDL 111
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNI 113
VE++LQP + + D ILFSDIL + V+ +GP +P+ T +
Sbjct: 112 VVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFNPLRTADDVDQVREF 171
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ + + +++++LRK++ N ++GF GAP+T+ASY++ GG K + + A+
Sbjct: 172 -VPEESVPYVGEALTVLRKEVENKAAVLGFVGAPFTLASYVVEGGSSKHFTKIKRLAFSQ 230
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ + LL + A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ V
Sbjct: 231 PKVLHALLQKFATSMAKYIQYQADSGAQTVQIFDSWATELSPVDFEEFSLPYLKQIVDTV 290
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPM 292
++ +PN I +A G+G +L+ LT + + LDWSV ++ L + VQGN+DP
Sbjct: 291 KQSHPNLPLILYASGSGGLLERLA-LTGVDVVSLDWSVDMAEGRKRLGPDVAVQGNVDPG 349
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + + + ++ G G I NLGHGI +NV + +
Sbjct: 350 VLFGSKEFITNRIYDVVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKG 400
>gi|126136855|ref|XP_001384951.1| uroporphyrinogen decarboxylase [Scheffersomyces stipitis CBS 6054]
gi|126092173|gb|ABN66922.1| uroporphyrinogen decarboxylase [Scheffersomyces stipitis CBS 6054]
Length = 362
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 109/354 (30%), Positives = 179/354 (50%), Gaps = 15/354 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY + + ++F + C E E+T+QP+
Sbjct: 8 KNDLILRAARGEKVERPPIWIMRQAGRYLPEYHEAK-GNRDFFETCRDAEIASEITIQPV 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
++ DAAI+FSDILVI A+G + +E +GP P+ + + L L
Sbjct: 67 NHFDGLIDAAIIFSDILVIPQAMGFEIEMLEGKGPVFVAPLRSPDDLARVNFQPDVLKSL 126
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
F+SI++ R KL + L+GF GAPWT+ YM G K + + Y+ + + L
Sbjct: 127 DWAFKSITLTRTKLNGRVPLLGFVGAPWTLLVYMTEGQGSKMFRFVKEWIYKYTEESHKL 186
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L ++D E+L Q+ AG ++Q+F++ AG LG EF+ ++ + +I + ++
Sbjct: 187 LQAITDACVEFLAQQVVAGAQMLQVFESWAGELGPREFDEFSLPYLRQIAEKLPKRLVEL 246
Query: 238 ---PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPM 292
FAKGA Y L + + + + LDW A+++ + +QGNLDP
Sbjct: 247 GVTEKIPLTVFAKGAWYALDDLCE-SGYDTVSLDWLYKPEDAVKVVNNRRITLQGNLDPG 305
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ ++V+ V ++ G G +I N GHG P + P+ + +K
Sbjct: 306 IMYGSDEVISQKVEEMIKGFGGGKQNYIINFGHGTHPFMKPEKIEHFLKECHKY 359
>gi|15837933|ref|NP_298621.1| uroporphyrinogen decarboxylase [Xylella fastidiosa 9a5c]
gi|23814029|sp|Q9PDP7|DCUP_XYLFA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|9106329|gb|AAF84141.1|AE003966_2 uroporphyrinogen decarboxylase [Xylella fastidiosa 9a5c]
Length = 354
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 125/348 (35%), Positives = 188/348 (54%), Gaps = 10/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L LQ + ++ PIWLMRQAGRYLPEYR +R+ +FL M TPE E+TLQP+
Sbjct: 3 KNDRLLRALQRDTVDRTPIWLMRQAGRYLPEYRAVRQHAGSFLKMAKTPELACEITLQPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL+I DA+G + F+E EGPR+ + + L +
Sbjct: 63 HRFPLDAAILFSDILMIPDAMGLELHFIEGEGPRLGKPIRDAAAITQLAVPDMETELRYV 122
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ ++RK+L N + LIGF G+PWT+A YMI GG K++ + A+ + LL+
Sbjct: 123 MDAVRLIRKELDNSVPLIGFSGSPWTLACYMIEGGSSKEYAHIKAMAFNAPDVLHQLLNT 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAK 241
+++ YL AQ AG +Q+FDT G L + ++ + RI + R
Sbjct: 183 VTNAVISYLAAQRAAGAQALQVFDTWGGILSPTMYRTFSLPYLTRIARELERGTGTERTP 242
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
+ F KG G + ++ + A+G+DW++ L A + +QGNLDP L
Sbjct: 243 LVLFGKGNGPYIAELA-MSGTEAVGVDWTIELEDAARRSNGQVALQGNLDPATLYGTPNN 301
Query: 301 MIDGVNAILDVLGSG------PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD +G +FNLGHG+TP +DP +V LV+ V+
Sbjct: 302 IAHEVQRTLDSYAAGNGGSREGHVFNLGHGMTPGMDPDHVSALVEAVQ 349
>gi|73977140|ref|XP_861812.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 2 [Canis familiaris]
Length = 332
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 121/328 (36%), Positives = 176/328 (53%), Gaps = 9/328 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+++ R ++F C +PE ELTLQP+RR+ DAAI+FSDILV+ AL
Sbjct: 1 MRQAGRYLPEFKETRA-AQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQAL 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V +GP +P+ + + + L +FQ+I++ R++L + LIGF
Sbjct: 60 GMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGYVFQAITLTRQRLAGRVPLIGF 119
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ +YMI GG Q + + YQ +A + LL L+D YL+ Q+ AG +
Sbjct: 120 AGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLRILTDALVPYLVGQVAAGAQAL 179
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRR 258
Q+F++HAG LG F +A V + V+ + I FAK + L+ +
Sbjct: 180 QLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGLAPVPMIIFAKDGHFALEELAQ 239
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+GLDW+V A E + K +QGNLDP L + + V +LD G +
Sbjct: 240 -AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEIGRLVQKMLDDFGPQRY 298
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I NLGHG+ P +DP++V V V
Sbjct: 299 IANLGHGLYPDMDPEHVGAFVDAVHKYS 326
>gi|30261187|ref|NP_843564.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Ames]
gi|47777891|ref|YP_017695.2| uroporphyrinogen decarboxylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184020|ref|YP_027272.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Sterne]
gi|165871836|ref|ZP_02216479.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0488]
gi|170688112|ref|ZP_02879324.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0465]
gi|254682753|ref|ZP_05146614.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CNEVA-9066]
gi|254725544|ref|ZP_05187326.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A1055]
gi|254734170|ref|ZP_05191883.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Western
North America USA6153]
gi|254740186|ref|ZP_05197878.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Kruger B]
gi|254753525|ref|ZP_05205561.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Vollum]
gi|254758623|ref|ZP_05210650.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Australia
94]
gi|38257417|sp|Q81U23|DCUP_BACAN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|30254801|gb|AAP25050.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Ames]
gi|47551596|gb|AAT30170.2| uroporphyrinogen decarboxylase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177947|gb|AAT53323.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. Sterne]
gi|164712413|gb|EDR17947.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0488]
gi|170668007|gb|EDT18758.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0465]
Length = 348
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|283856598|ref|YP_163733.2| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|283775610|gb|AAV90622.2| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 345
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 140/340 (41%), Positives = 205/340 (60%), Gaps = 4/340 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI
Sbjct: 9 DAPLLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLPLVEDSEAAAEATLQPIN 68
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R++FDAAILFSDILVI ALG+++ F++ EGP++ P L + N L PI+
Sbjct: 69 RFHFDAAILFSDILVIPYALGQDLTFIKGEGPKLTPALVNHRLDLLTKL---PNRLTPIY 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++ +
Sbjct: 126 ETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEAI 185
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 186 IDLTVLYLDGQIEAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPIIG 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 246 FPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALDQ 305
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 306 SITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIRG 345
>gi|319892865|ref|YP_004149740.1| Uroporphyrinogen III decarboxylase [Staphylococcus pseudintermedius
HKU10-03]
gi|317162561|gb|ADV06104.1| Uroporphyrinogen III decarboxylase [Staphylococcus pseudintermedius
HKU10-03]
gi|323464103|gb|ADX76256.1| uroporphyrinogen decarboxylase [Staphylococcus pseudintermedius
ED99]
Length = 344
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 109/345 (31%), Positives = 190/345 (55%), Gaps = 8/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ IL ++G V++ P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 TTKNDTILRAIKGEVVSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTAL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ +Y+ DAA+L+ DI+ ++G +V GP + +PI ID + +
Sbjct: 62 PVEQYDTDAAVLYKDIMTPLKSIGVDVDIKSGIGPVIANPIRQMSDVEALGQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ Q + Y + + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNQTKALMYSDEATWFKL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+D+S Y+ AQ+ AG +IQ+FD+ G L + +++ Y + ++I+ ++ N
Sbjct: 180 MDVLTDMSIRYVGAQVKAGAQLIQVFDSWVGALNQPDYDYYIKPCMEKLITGIKAY--NV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA ++++++ L + +GLDW ++ A +QGNLDP L+ +V
Sbjct: 238 PVIMFGVGASHLIESWNALP-IDVLGLDWRTSINEARAKGVSKALQGNLDPSILLAPWEV 296
Query: 301 MIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + ILD G IFNLGHG+ P+V P+ + + + V
Sbjct: 297 IEARLKPILDQGVAHGRHIFNLGHGVFPEVKPETLKHVAQFVHDY 341
>gi|239637886|ref|ZP_04678847.1| uroporphyrinogen decarboxylase [Staphylococcus warneri L37603]
gi|239596449|gb|EEQ78985.1| uroporphyrinogen decarboxylase [Staphylococcus warneri L37603]
Length = 345
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 193/345 (55%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HTKNDTILKMIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ YN DAAIL+ DI+ +G +V GP + +PI + + ID + +
Sbjct: 62 PVDNYNTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIQNPIKSVQDVEKLSQIDPKRD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I IL ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKILTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNLTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L +S +Y+ AQI AG ++IQIFD+ G L ++ Y + ++++ ++R++ +
Sbjct: 180 MDHLVAISIDYVNAQIEAGAELIQIFDSWVGALNVQDYRKYIKPGMDKLVNGIKRQH-HV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ +V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSIQQAQQMGVNKTLQGNLDPSLLLAPWEV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + G IFNLGHG+ P+V P+ + + + V
Sbjct: 298 IEERLKDILDQGMSRGKHIFNLGHGVFPEVQPETLRKVSQFVHDY 342
>gi|228919902|ref|ZP_04083257.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228839718|gb|EEM85004.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 348
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 184/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL +QI+AG +QIFD+ G + ++ + ++ RI + VR+ I
Sbjct: 183 LADMVITYLKSQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVLKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|332184780|gb|AEE27034.1| Uroporphyrinogen III decarboxylase [Francisella cf. novicida 3523]
Length = 344
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 189/346 (54%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ + PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDSFGEKKLEKPPVWIMRQAGRYLPEYRAVRAKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP PI +Q+ +++ ++ L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGTGPVFSAPIQSQKDLDKLKSVEDSIDSLEYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + + LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--RVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L +++++ + + I V++K N +
Sbjct: 180 LADITVIYLLEQVKAGASSLMIFDTWGGILPLQHYKDFSLKYMEYIAKNVKQKI-NVPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + G+DWSV L A + +QGN DP L + +
Sbjct: 239 FFTKGGSNFFEELKDKS-CDGAGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGTKESIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V A ++ + S +I NLGHGI P +DP NV +V +R
Sbjct: 298 KTVKANIEFIQSDKLNNYIVNLGHGIYPDIDPDNVKVMVDAIREFS 343
>gi|167635369|ref|ZP_02393683.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0442]
gi|170707610|ref|ZP_02898062.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0389]
gi|177654151|ref|ZP_02936124.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0174]
gi|229601385|ref|YP_002865616.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0248]
gi|167529197|gb|EDR91950.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0442]
gi|170127385|gb|EDS96260.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0389]
gi|172080858|gb|EDT65938.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0174]
gi|229265793|gb|ACQ47430.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0248]
Length = 356
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 14 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 73 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 132 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDK 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 191 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 249 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 307
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 308 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 350
>gi|134108774|ref|XP_777040.1| hypothetical protein CNBB5660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259723|gb|EAL22393.1| hypothetical protein CNBB5660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 380
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 127/357 (35%), Positives = 192/357 (53%), Gaps = 17/357 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G P+W+MRQAGRYLPE+ ++R K +F + C TP LTLQPI
Sbjct: 23 KNDLLLRAASGEETPRAPVWVMRQAGRYLPEFLEVR-KHHSFFECCQTPSLASALTLQPI 81
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNYL 120
RY DA+I+F DILV+ ALG V + GP + +P +T +I L ++D+ L
Sbjct: 82 DRYPRLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDIKRLRKDVDVQ-KEL 140
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + L
Sbjct: 141 GYVFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHEL 200
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR----- 235
L ++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V
Sbjct: 201 LRRIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQL 260
Query: 236 KYPNAKFISFAKGAG----YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+P + FAKGA + L + T +GLDW+V E + K+ +QGN D
Sbjct: 261 SHPGVRITLFAKGANTPSTFSLLSDPAQTGYATLGLDWTVDPVEVREIVGKKVNLQGNFD 320
Query: 291 PMRLVVGNQVMIDGVNAILDVLGS--GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L G + + V + G +I NLGHGITP V P+++ ++ V
Sbjct: 321 PTVLYGGKEGIEKEVERLSARWKKAGGGWIANLGHGITPNVKPEDMGWFLECVHKYS 377
>gi|242802986|ref|XP_002484083.1| uroporphyrinogen decarboxylase [Talaromyces stipitatus ATCC 10500]
gi|218717428|gb|EED16849.1| uroporphyrinogen decarboxylase [Talaromyces stipitatus ATCC 10500]
Length = 363
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 116/356 (32%), Positives = 187/356 (52%), Gaps = 18/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PP+W+MRQAGRYLPEY + + ++F + C +PE LTLQP+
Sbjct: 9 KNDLLLRAARGETVERPPVWVMRQAGRYLPEYHEAK-GNRDFFECCRSPEIASTLTLQPV 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP +P+ + + +L ++D+
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMIVEMIDKKGPSFPEPLISPDDGQYEKILKKDVDVK 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 128 -KELDYVYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGTKLFIQSKKWIYKYPNE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+L ++++ EYL Q+ AG ++Q+FD+ AG L F+ +A + I + ++
Sbjct: 187 SKAMLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPATFKEFALPYLRHISQHLPKR 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + + N +GLDW + A + + +QGN D
Sbjct: 247 LQELGLERVPMTVFAKGAWYALDDLCE-SGYNVVGLDWLHDPAEAYSVARGRVALQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
P L + V ++ G +I NLGHGITP V+P ++ + +
Sbjct: 306 PGILYGDRNAITKTVENMVKGFGGGKKGWIANLGHGITPFVNPDDLKFFFEEIHRH 361
>gi|326444027|ref|ZP_08218761.1| uroporphyrinogen decarboxylase [Streptomyces clavuligerus ATCC
27064]
Length = 371
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 170/342 (49%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + + P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+R
Sbjct: 33 DSAFLRACRREPVPHTPVWFMRQAGRSLPEYLKVREGIA-MLDSCMRPELVKEITLQPVR 91
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP + +P ++ L DL + +
Sbjct: 92 RHGVDAAIYFSDIVVPLKAIGIDLDIKPGVGPVVAEPFRSRAD--LARLRDLTPEDVWYV 149
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG ++H + + + + LLD
Sbjct: 150 TEAIGLLTAELGG-TPLIGFAGAPFTLASYLVEGGPSRNHEHTKALLHSDPELWADLLDR 208
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 209 LAEITSAFLKVQIEAGASAVQLFDSWVGALAPVDYRRSVMPASVKVFDAVAGY--GVPRI 266
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 267 HFGVGTGELLGLMGE-AGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAGTRAVE 325
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L +FNLGHG+ P DP + LV V
Sbjct: 326 AMTDEVLRAAAGLEGHVFNLGHGVLPTTDPDALTRLVSYVHE 367
>gi|330684758|gb|EGG96453.1| uroporphyrinogen decarboxylase [Staphylococcus epidermidis VCU121]
Length = 345
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 108/345 (31%), Positives = 192/345 (55%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 3 HTKNDTILKMIKGEKTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ YN DAAIL+ DI+ +G +V GP + +PI + + ID + +
Sbjct: 62 PVDNYNTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIQNPIKSVQDVEKLSQIDPKRD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I IL ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKILTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNLTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L +S +Y+ AQI AG +++QIFD+ G L ++ Y + ++++ ++R++
Sbjct: 180 MDHLVAISIDYVNAQIEAGAELVQIFDSWVGALNVQDYRKYIKPGMDKLVNGIKRQH-QV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW + A ++ +QGNLDP L+ +V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSIQQAQQMGVNKTLQGNLDPSLLLAPWEV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + G IFNLGHG+ P+V P+ + + + V
Sbjct: 298 IEERLKDILDQGMSRGKHIFNLGHGVFPEVQPETLRKVSQFVHDY 342
>gi|89257075|ref|YP_514437.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica LVS]
gi|115315431|ref|YP_764154.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica OSU18]
gi|156503285|ref|YP_001429350.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009462|ref|ZP_02274393.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FSC200]
gi|167011117|ref|ZP_02276048.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FSC200]
gi|254368311|ref|ZP_04984329.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica 257]
gi|290954349|ref|ZP_06558970.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312213|ref|ZP_06803013.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica URFT1]
gi|122324583|sp|Q0BK67|DCUP_FRATO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|122500219|sp|Q2A1G5|DCUP_FRATH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|171769936|sp|A7NEJ1|DCUP_FRATF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|89144906|emb|CAJ80251.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica LVS]
gi|115130330|gb|ABI83517.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica OSU18]
gi|134254119|gb|EBA53213.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica 257]
gi|156253888|gb|ABU62394.1| uroporphyrinogen decarboxylase [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 344
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 193/346 (55%), Gaps = 9/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L+ ++ PP+W+MRQAGRYLPEYR +R KF NF+DMC + E+ L P++
Sbjct: 2 RKLFLDAFGEKKLDKPPVWIMRQAGRYLPEYRAVRVKFDNFMDMCRNADACCEVALHPLQ 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY+ DAAI+FSDIL I +A+G +++F++ GP +PI +Q+ +I+ + L +
Sbjct: 62 RYDLDAAIVFSDILTIPEAMGMDLKFIKGAGPVFSEPIQSQKDLDKLKSIEDSIGSLDYV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + ++ LIGF G+PWT+A+YMI G K + R Y N + + LL
Sbjct: 122 YNAVKTTSSAI--NVPLIGFTGSPWTLAAYMIEGSGSKQFNKLRKMMYANPQLMHSLLQR 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ YL+ Q+ AG + IFDT G L ++N++ + + I V++K N +
Sbjct: 180 LADITIIYLLEQVKAGASSVMIFDTWGGILPLEHYKNFSLKYMEYIAKNVKQKI-NIPIV 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F KG + + + + +G+DWSV L A + +QGN DP L Q +
Sbjct: 239 FFTKGGSNFFEEIKDKS-CDGVGVDWSVTLKQARHRIGVGKVLQGNFDPAFLYGSKQSIR 297
Query: 303 DGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V A ++ + S +I NLGHGI P +DP +V ++ +R
Sbjct: 298 ETVRANIEFIQSDKLNNYIVNLGHGIYPDIDPDSVRVMIDAIREFS 343
>gi|218902270|ref|YP_002450104.1| uroporphyrinogen decarboxylase [Bacillus cereus AH820]
gi|226723864|sp|B7JDM6|DCUP_BACC0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218538223|gb|ACK90621.1| uroporphyrinogen decarboxylase [Bacillus cereus AH820]
Length = 348
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAPHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|218896123|ref|YP_002444534.1| uroporphyrinogen decarboxylase [Bacillus cereus G9842]
gi|228904029|ref|ZP_04068135.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 4222]
gi|228964128|ref|ZP_04125252.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|226723865|sp|B7IKE2|DCUP_BACC2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|218545162|gb|ACK97556.1| uroporphyrinogen decarboxylase [Bacillus cereus G9842]
gi|228795562|gb|EEM43045.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228855625|gb|EEN00179.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis IBL 4222]
Length = 348
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|212540048|ref|XP_002150179.1| uroporphyrinogen decarboxylase [Penicillium marneffei ATCC 18224]
gi|210067478|gb|EEA21570.1| uroporphyrinogen decarboxylase [Penicillium marneffei ATCC 18224]
Length = 363
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 117/356 (32%), Positives = 188/356 (52%), Gaps = 18/356 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PP+W+MRQAGRYLPEY + + ++F D C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGETVERPPMWVMRQAGRYLPEYHEAK-GNRDFFDCCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP P+ + + +L ++D+
Sbjct: 68 ERYAGLIDAAIIFSDILVIPQAMGMVVEMIDKKGPSFPQPLVSPDDGQYEKILKKDVDVK 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+
Sbjct: 128 -KELDYVYKAITLTRFKLKGRVPLIGFCGAPWTLLCYMVEGGGTKMFIQSKKWIYKYPNE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+L ++++ EYL Q+ AG ++Q+FD+ AG L F+ ++ + I + ++
Sbjct: 187 SKAMLQKIAELCVEYLALQVTAGAQLVQVFDSWAGELSPATFKEFSLPYLRYISEHLPKR 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L++ + N +GLDW + A + + +QGN D
Sbjct: 247 LQELGLERVPMTVFAKGAWYALEDLCE-SGYNVVGLDWLHDPAEAYRIARGRVTLQGNAD 305
Query: 291 PMRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
P L + V ++ G +I NLGHGITP V+P+++ + +
Sbjct: 306 PGILYGDRSAITKTVEDMVKGFGGGKKGWIANLGHGITPLVNPEDLKFFFEEIHRH 361
>gi|229166008|ref|ZP_04293772.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH621]
gi|228617419|gb|EEK74480.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH621]
Length = 348
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|75675170|ref|YP_317591.1| uroporphyrinogen decarboxylase [Nitrobacter winogradskyi Nb-255]
gi|74420040|gb|ABA04239.1| uroporphyrinogen decarboxylase [Nitrobacter winogradskyi Nb-255]
Length = 325
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 144/321 (44%), Positives = 204/321 (63%), Gaps = 2/321 (0%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRYLPEYR++R K FLD+C+TPE+ E+TLQPIRR+ FDAAI+FSDILVI A
Sbjct: 1 MMRQAGRYLPEYRELRAKAGGFLDLCFTPEFAAEVTLQPIRRFGFDAAIIFSDILVIPYA 60
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
LGR+VRF EGPR+DP+ T + + + + L P+F+++ ++ +L LIGF
Sbjct: 61 LGRSVRFEAGEGPRLDPLDTPDKIAAL-SSEADMTKLEPVFEALRRVKSELDPKTALIGF 119
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA+YM++G D R+ AY++ AF ++D + D S YL+ Q+ AG D +
Sbjct: 120 CGAPWTVATYMVAGQGTPDQAPARMMAYRHPDAFAKVIDAIVDNSIRYLLGQLKAGADAL 179
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFDT AG L EF ++ RI++ VRR+ P+AK I F +GAG +L +Y T +
Sbjct: 180 QIFDTWAGVLPPREFAQWSIEPTKRIVAGVRRQVPDAKIIGFPRGAGALLPSYIEATGVD 239
Query: 264 AIGLDWSV-PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
A+ +DW+ P ++Q VQGNLDP+ L+ G + V+ +L G IFNLG
Sbjct: 240 AVSIDWAAEPFLIRDKVQNRVAVQGNLDPLALIAGGAALNRAVDDVLTNFAGGRLIFNLG 299
Query: 323 HGITPQVDPKNVLDLVKTVRS 343
HGI P+ +V +++ VR
Sbjct: 300 HGIQPETPIPHVEQMIRRVRG 320
>gi|75758788|ref|ZP_00738902.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493692|gb|EAO56794.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 356
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 14 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I+ + + I
Sbjct: 73 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 132 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 191 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRPM--GVPMI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 249 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEE 307
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 308 HVKGILDQGMKEPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 350
>gi|58262678|ref|XP_568749.1| uroporphyrinogen decarboxylase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223399|gb|AAW41442.1| uroporphyrinogen decarboxylase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 380
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 127/357 (35%), Positives = 192/357 (53%), Gaps = 17/357 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G P+W+MRQAGRYLPE+ ++R K +F + C TP LTLQPI
Sbjct: 23 KNDLLLRAASGEETPRAPVWVMRQAGRYLPEFLEVR-KHHSFFECCQTPSLASALTLQPI 81
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNYL 120
RY DA+I+F DILV+ ALG V + GP + +P +T +I L ++D+ L
Sbjct: 82 DRYPRLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDIKRLRKDVDVQ-KEL 140
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + L
Sbjct: 141 GYVFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHEL 200
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR----- 235
L ++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V
Sbjct: 201 LRRIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQL 260
Query: 236 KYPNAKFISFAKGAG----YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
+P + FAKGA + L + T +GLDW+V E + K+ +QGN D
Sbjct: 261 SHPGVRITLFAKGANTPSTFSLLSDPAQTGYATLGLDWTVDPVEVREIVGKKVNLQGNFD 320
Query: 291 PMRLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L G + + V + G +I NLGHGITP V P+++ ++ V
Sbjct: 321 PTVLYGGKEGIEKEVERLSARWKEAGGGWIANLGHGITPNVKPEDMGWFLECVHKYS 377
>gi|241762341|ref|ZP_04760421.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241373135|gb|EER62774.1| uroporphyrinogen decarboxylase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 345
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 141/341 (41%), Positives = 206/341 (60%), Gaps = 6/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L++L G + PPIWLMRQAGRYLPEYR++R++ FL + E E TLQPI
Sbjct: 9 DAPLLKLLAGQKLTTPPIWLMRQAGRYLPEYRKLREQKAGFLPLVEDSEAAAEATLQPIN 68
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPI 123
R++FDAAILFSDILVI LG+++ FV+ EGP++ P + + LL D L PI
Sbjct: 69 RFHFDAAILFSDILVIPYTLGQDLTFVKGEGPKLTPALVNHRLDLLTKLPD----RLTPI 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ + +L T +GF G+PWTVA+YM++G +D R AY++ +AF+ +++
Sbjct: 125 YETVRRVAHRLSPETTFLGFAGSPWTVATYMVAGEGSRDQAVTRAMAYRDPQAFSEIIEA 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ D++ YL QI AGVD +Q+FD+ AG L +FE + R++ +R K+PN I
Sbjct: 185 IIDLTVLYLDGQIEAGVDAVQLFDSWAGTLSPQQFERWVIDPTARLVEKLREKHPNIPII 244
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F KGA +K Y T AIGLD ++ +A + L + PVQGNLDP+ L+ G + +
Sbjct: 245 GFPKGAASRIKAYIADTQVTAIGLDETIDPYWADQYLPADFPVQGNLDPLVLLAGGEALD 304
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ILD P IFNLGHGI PQ +V L++ +R
Sbjct: 305 QSITTILDAFSERPHIFNLGHGILPQTPLTHVSHLLEKIRG 345
>gi|49484075|ref|YP_041299.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425946|ref|ZP_05602370.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428611|ref|ZP_05605009.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257431248|ref|ZP_05607625.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433928|ref|ZP_05610286.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436844|ref|ZP_05612888.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M876]
gi|282904409|ref|ZP_06312297.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C160]
gi|282906232|ref|ZP_06314087.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909150|ref|ZP_06316968.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911457|ref|ZP_06319259.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914629|ref|ZP_06322415.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M899]
gi|282919595|ref|ZP_06327330.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C427]
gi|282924975|ref|ZP_06332641.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C101]
gi|283958587|ref|ZP_06376038.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503701|ref|ZP_06667548.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
58-424]
gi|293510722|ref|ZP_06669427.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M809]
gi|293537264|ref|ZP_06671944.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M1015]
gi|295428412|ref|ZP_06821041.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590622|ref|ZP_06949260.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MN8]
gi|56748678|sp|Q6GFM3|DCUP_STAAR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|49242204|emb|CAG40911.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271640|gb|EEV03786.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275452|gb|EEV06939.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278196|gb|EEV08844.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282021|gb|EEV12158.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284195|gb|EEV14318.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M876]
gi|282313341|gb|EFB43737.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C101]
gi|282317405|gb|EFB47779.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C427]
gi|282321810|gb|EFB52135.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M899]
gi|282325152|gb|EFB55462.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327414|gb|EFB57709.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331524|gb|EFB61038.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596027|gb|EFC00991.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
C160]
gi|283790736|gb|EFC29553.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920109|gb|EFD97177.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M1015]
gi|291095367|gb|EFE25632.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
58-424]
gi|291466613|gb|EFF09134.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
M809]
gi|295127812|gb|EFG57449.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575508|gb|EFH94224.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
MN8]
gi|312437702|gb|ADQ76773.1| uroporphyrinogen decarboxylase [Staphylococcus aureus subsp. aureus
TCH60]
Length = 345
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 193/345 (55%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + IL++++G P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ Y+ DAAIL+ DI+ +G +V GP + +PI T + ID + +
Sbjct: 62 PVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ + L
Sbjct: 121 PYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R+IS V+ K+ +
Sbjct: 180 MNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKH-DV 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW ++ A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + ILD + +G IFNLGHG+ P+V P+ + + V +
Sbjct: 298 IEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSGFVHTY 342
>gi|163938985|ref|YP_001643869.1| uroporphyrinogen decarboxylase [Bacillus weihenstephanensis KBAB4]
gi|229889829|sp|A9VI98|DCUP_BACWK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|163861182|gb|ABY42241.1| uroporphyrinogen decarboxylase [Bacillus weihenstephanensis KBAB4]
Length = 348
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACRGERTEYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHRAVQGNMDPSFLLAPWPVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|229918183|ref|YP_002886829.1| uroporphyrinogen decarboxylase [Exiguobacterium sp. AT1b]
gi|229469612|gb|ACQ71384.1| uroporphyrinogen decarboxylase [Exiguobacterium sp. AT1b]
Length = 349
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 183/349 (52%), Gaps = 13/349 (3%)
Query: 1 MNER-KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M R IL+ +G + P+W MRQAGRY PEYR+I+ K ++ ++ + PE +T
Sbjct: 1 MTRRMNDTILKAFKGEATDYVPVWYMRQAGRYQPEYREIK-KTRSLFEITHDPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFL 117
P+++ DAAIL+ DI+ ++G +V GP +D P T E + L P +
Sbjct: 60 ELPVKQLGVDAAILYKDIMTPLPSMGVDVEIKSGIGPVIDNPYRTMEDVERLKPLNPEDI 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+Y +F +I +LR++L + LIGF GAP+T+ASYMI GG +++ + + Y +
Sbjct: 120 SY---VFDTIRLLRERL--EVPLIGFSGAPFTLASYMIEGGPSRNYHRTKALMYAEPDVW 174
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
N L++ L D+ Y AQ AG+ Q+FD+ G L ++ Y + RI +R
Sbjct: 175 NALMEKLGDMVITYAKAQADAGIQAFQLFDSWVGTLSRKDYARYIKPTTERIFKELRSL- 233
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
+ I GA + ++ + L + +GLDW + + A + VQGNLDP L+
Sbjct: 234 -DIPLIMHGVGASHQIEEWHDLP-LDVVGLDWRLSVQEARDRGITKAVQGNLDPSFLLAP 291
Query: 298 NQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + V ILD + ++FNLGHG+ P+VDP ++ L +
Sbjct: 292 WPVIEEKVKEILDEGMKQPGYVFNLGHGVFPEVDPAVLVKLTAFIHDYS 340
>gi|228475900|ref|ZP_04060610.1| uroporphyrinogen decarboxylase [Staphylococcus hominis SK119]
gi|228270055|gb|EEK11525.1| uroporphyrinogen decarboxylase [Staphylococcus hominis SK119]
Length = 345
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 113/345 (32%), Positives = 191/345 (55%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+++ IL+ ++G + + P+W MRQAGR PEYR++++K+ + D+ + PE +T
Sbjct: 3 HKKNNTILQTIKGELTSHTPVWFMRQAGRSQPEYRKLKEKY-SLFDITHQPELCAYVTHL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+ YN DAA+L+ DI+ +G +V GP + +PI + + ID + +
Sbjct: 62 PVDNYNTDAAVLYKDIMTPLKPIGVDVEIQSGIGPVIHNPIKSVKDVEKLTQIDPKRD-V 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I IL ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + + L
Sbjct: 121 PYVLETIKILTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYGDEETWFAL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L DVS +Y+ AQ+ AG ++IQIFD+ G L ++ Y + R++ ++ ++ N
Sbjct: 180 MNHLVDVSIKYVTAQVEAGAELIQIFDSWVGALNVQDYRYYIKPFMDRLVCGIKEQH-NI 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L + +GLDW + A +L +QGNLDP L+ V
Sbjct: 239 PVILFGVGASHLINEWNDLP-IDVLGLDWRTSILQADQLGVNKTLQGNLDPSLLLAPWDV 297
Query: 301 MIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V AILD + G IFNLGHG+ P+V P + + + V
Sbjct: 298 LEQRVKAILDEGMQRGKHIFNLGHGVFPEVQPDTLKKVTQLVHDY 342
>gi|73662274|ref|YP_301055.1| uroporphyrinogen decarboxylase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642906|sp|Q49YM7|DCUP_STAS1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|72494789|dbj|BAE18110.1| uroporphyrinogen-III decarboxylase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 344
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 112/346 (32%), Positives = 189/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL +++G ++ P+W MRQAGR PEYR++++K+ + ++ + E +T
Sbjct: 1 MHNKNNTILNMIKGESVSHTPVWFMRQAGRSQPEYRRLKEKY-SLFEITHQAELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ YN DAA+L+ DI+ +G +V GP + +PI T + +ID +
Sbjct: 60 LPVDNYNTDAAVLYKDIMTPLQPIGVDVEIKSGIGPVIHNPIKTIQDVEKLGHIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y + +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYSDEATWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L ++S Y AQI AG +IQ+FD+ G L ++ Y ++ ++IS ++ KY N
Sbjct: 178 LMDHLVEMSITYTSAQIEAGAQIIQVFDSWVGALNVQDYRYYIKPAMNKLISGIKEKY-N 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ + L + +GLDW + + A + + +QGNLDP L+
Sbjct: 237 VPVILFGVGASHLADEWNTLP-IDVLGLDWRLSIKEASSMNIDKTLQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + + AILD G IFNLGHG+ P+V P+ + + V
Sbjct: 296 VIEERLKAILDQGIAHGKHIFNLGHGVFPEVKPETLKRVTTFVHDY 341
>gi|171769482|sp|A7GM02|DCUP_BACCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 348
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 181/343 (52%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACKGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIENPIRSMQDVEKLGEIHPE-EDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L+D
Sbjct: 124 LDTIRLLTAEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LSD+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR N I
Sbjct: 183 LSDMVIAYLKAQIQAGAKAVQVFDSWVGTVNVADYRIFIKPAMERIFAQVREM--NVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GAG++ + L + +GLDW + + A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAGHLANEWNDLP-LDVVGLDWRLSIEEARTRGIHKAVQGNMDPSLLLAPWNVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + ++FNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLTAFIHEYS 342
>gi|152974638|ref|YP_001374155.1| uroporphyrinogen decarboxylase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023390|gb|ABS21160.1| uroporphyrinogen decarboxylase [Bacillus cytotoxicus NVH 391-98]
Length = 357
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 181/343 (52%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 15 NETFLKACKGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I + I
Sbjct: 74 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIENPIRSMQDVEKLGEIHPE-EDVPYI 132
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L+D
Sbjct: 133 LDTIRLLTAEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFALMDK 191
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LSD+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR N I
Sbjct: 192 LSDMVIAYLKAQIQAGAKAVQVFDSWVGTVNVADYRIFIKPAMERIFAQVREM--NVPMI 249
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GAG++ + L + +GLDW + + A VQGN+DP L+ V+ +
Sbjct: 250 MHGVGAGHLANEWNDLP-LDVVGLDWRLSIEEARTRGIHKAVQGNMDPSLLLAPWNVIEE 308
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + ++FNLGHG+ P+V+P + L +
Sbjct: 309 HVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLTAFIHEYS 351
>gi|73977146|ref|XP_861894.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 5 [Canis familiaris]
Length = 346
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 112/349 (32%), Positives = 166/349 (47%), Gaps = 30/349 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRA-AQDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ + + + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A V + V+ +
Sbjct: 173 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGL 232
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 233 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 291
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 292 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKYS 340
>gi|87308937|ref|ZP_01091075.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
gi|87288280|gb|EAQ80176.1| uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
[Blastopirellula marina DSM 3645]
Length = 645
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 171/342 (50%), Gaps = 9/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ + + PIW+MRQAGRY+ EYR++R K FL++C P+ E+ +
Sbjct: 305 DSPFMKACRREPTDVTPIWMMRQAGRYMAEYREVRAKT-TFLELCKNPQLCSEVMCTAVT 363
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAI+FSD+L I + +G ++ + + EGP + +P+ ++ L +
Sbjct: 364 KLGVDAAIIFSDLLPILEPMGLDLEYAQGEGPVIHNPVRESADVDRVLELESA-ESLHYV 422
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ R +P HI +IGF GAP+T+ASY I GG + + + Y++ A+ L++
Sbjct: 423 METVRQTRADMPEHIPVIGFAGAPFTLASYAIEGGASRTYLHTKTLMYRDPDAWRALMER 482
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L YL AQI AG +QIFD+ AGCL ++ Y + II + P I
Sbjct: 483 LVRAITVYLNAQIAAGAQCVQIFDSWAGCLSPADYRRYLLPHMKEIIGGIT---PGTPII 539
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
+FA G +L +G+DW + L+ A + + VQGNLDP+ L+ +
Sbjct: 540 NFATGNPALLPLLAE-AGPAVVGVDWRIGLADAWNTIGENFAVQGNLDPVTLLADPIEIR 598
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+LD G IFNLGHGI Q N + LV V
Sbjct: 599 RRAKEVLDQAAGRPGHIFNLGHGILQQTPVDNAIALVDMVHE 640
>gi|296114267|ref|ZP_06832921.1| uroporphyrinogen decarboxylase [Gluconacetobacter hansenii ATCC
23769]
gi|295979028|gb|EFG85752.1| uroporphyrinogen decarboxylase [Gluconacetobacter hansenii ATCC
23769]
Length = 353
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 198/353 (56%), Gaps = 13/353 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E + +L L G I PPP+WLMRQAGR+LPE+R +R+K +F+ C TP+ E+TL
Sbjct: 1 MTETGKPLLRALAGEAIWPPPVWLMRQAGRFLPEFRALREKA-DFITRCMTPDMATEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ D AILFSDIL++ A+G+++ F+ GP ++P+ + ++
Sbjct: 60 QPIRRFGMDGAILFSDILILPWAMGQSLEFIHGRGPVLEPVRSLHDLE-RLDVKRVEAAT 118
Query: 121 LPIFQSISILRK----------KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+P+ +++ LR P +TLIGF GAP+TVA YM+ G ++ R A
Sbjct: 119 MPVMETLQRLRTIVDGPDPIGVAKPGQVTLIGFAGAPFTVACYMVEGHGSREFDVTRGLA 178
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + F+ L+D L+ +A+ L QI AG + + +FD+ AG L EF + RI+
Sbjct: 179 YSDPEFFDRLIDILTIATADMLCNQIVAGAEAVMLFDSWAGLLPPSEFRRHVIAPAQRIV 238
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNL 289
+ ++P I F + AG M Y R T NA+ LD S + A +L +QGNL
Sbjct: 239 KIINERHPGVPIIGFPRLAGLMAVEYGRETGVNAMALDTSADMKAIAEQLPNTLTLQGNL 298
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP+R++ G + M AI D + P IFNLGHG+ P P++V DL+ T+R
Sbjct: 299 DPLRVLAGGEGMRAEARAIRDAMKGRPHIFNLGHGVVPATPPEHVGDLIATIR 351
>gi|254572169|ref|XP_002493194.1| Uroporphyrinogen decarboxylase [Pichia pastoris GS115]
gi|238032992|emb|CAY71015.1| Uroporphyrinogen decarboxylase [Pichia pastoris GS115]
gi|328352791|emb|CCA39189.1| uroporphyrinogen decarboxylase [Pichia pastoris CBS 7435]
Length = 361
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 117/352 (33%), Positives = 193/352 (54%), Gaps = 16/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY +++ ++F + C E E+T+QPI
Sbjct: 8 KNDLILRAARGEKVERPPIWIMRQAGRYLPEYHEVKGG-RDFFETCRDAEIASEITIQPI 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNY 119
++ DAAI+FSDILVI A+G V+ V+ GP+ +P+ ++ L ++D+ L
Sbjct: 67 THFDGLIDAAIIFSDILVIPQAMGMEVKMVDKVGPQFPNPLRKPSDLDHLKKDVDV-LKE 125
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++IS+ RKKL + L+GFCGAPWT+ YM GG K + + Y+ ++ +
Sbjct: 126 LDWAFKAISLTRKKLNGRVPLLGFCGAPWTLLVYMTEGGGTKMFRFAKEWIYKFTKESHQ 185
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G LG EF+ ++ + +I S + +
Sbjct: 186 LLQQITDVAVEFLAQQVVAGAQMLQVFESWGGELGPDEFDEFSLPYLRQISSKLPLRLKE 245
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
N FAKG+ Y L+ + + + LDW S A+++ +QGNLDP
Sbjct: 246 LGITENVPITVFAKGSWYALEQLCD-SGYDVVSLDWLFRPSDAVQIANGRIALQGNLDPG 304
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + V+ ++ G G +I N GHG P +DP+ + ++
Sbjct: 305 TMYGSKETISKKVDKMIKGFGGGKQNYIINFGHGTHPFMDPEQIRWFLQECH 356
>gi|116181730|ref|XP_001220714.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185790|gb|EAQ93258.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 370
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 121/357 (33%), Positives = 184/357 (51%), Gaps = 21/357 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL V +G + PPIW+MRQAGRYLPEY + + ++F + C PE LTLQPI
Sbjct: 9 QNDLILRVARGEKVERPPIWVMRQAGRYLPEYHEAKGG-RDFFECCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
RY DA+I+FSDILVI A+G V V+ +GP P Q ++ N+D+
Sbjct: 68 ERYGGLLDASIIFSDILVIPQAMGMVVEMVDKKGPHFPSPLQSPDDGQYAEVMKRNVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ RKKL + L GFCGAPWT+ YM+ GG K + + + Y+
Sbjct: 128 -KELDYVYKAITLTRKKLQGRVPLFGFCGAPWTLFCYMVEGGGSKFFKETKKWIYKYPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S++ EYL Q+ AG +IQ+FD+ AG L F+ ++ + I + +
Sbjct: 187 TKALLQKISELCVEYLALQVKAGAQLIQVFDSWAGELSPSSFKKFSQPYLEYIAKHLPPR 246
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNL 289
+ F KGA Y L + + +GLDW + A++ + PV QGN
Sbjct: 247 LKEMGLEPVPMVVFPKGAWYALDAACNM-GYHIVGLDWLHDPAEAVKTVGDRPVVLQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L + + + V ++ +I NLGHGITP V+P ++ + +
Sbjct: 306 DPGVLYGSHAGITEVVEEMVKGFDWANRRKGWIVNLGHGITPFVNPDDLKFFFQEIH 362
>gi|227487183|ref|ZP_03917499.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541649|ref|ZP_03971698.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092841|gb|EEI28153.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182617|gb|EEI63589.1| uroporphyrinogen decarboxylase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 350
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 121/358 (33%), Positives = 187/358 (52%), Gaps = 25/358 (6%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
MN R+ +L+ +G + P+W MRQAGR LPEYR+IR LD C+ PE E
Sbjct: 1 MNRRQLTHAPLLQAARGETPDHTPVWFMRQAGRSLPEYREIRANIG-MLDSCFNPELLAE 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLF 116
+TLQP+RR+ D AILFSDI+V A G + + GP +D P+ T+ P ++
Sbjct: 60 ITLQPVRRHGVDGAILFSDIVVPLKAAGVKLDIIPGRGPVLDHPLRTRADIEALPVLEHE 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + Q I I+ +L + TLIGF GAP+T+ASY++ GG K+H + +
Sbjct: 120 ITE---VAQGIEIILDELTDTQTLIGFVGAPFTLASYLVEGGPSKNHIHTKALMHNEPET 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L++ ++ +L Q+HAG+D +Q+FD+ AG L EH++ +Y +I+ A +
Sbjct: 177 WKLLMEKITATVTAFLQTQMHAGIDAMQLFDSWAGFLSEHDYRSYVQPYSAQILEAAQ-- 234
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-----QKEGPVQGNLDP 291
I F G G +L + ++ +G+DW VPL A E + +QGNLDP
Sbjct: 235 --GIPRIHFGVGTGELLPDMAA-AGADVVGVDWRVPLDRAAERIHRVSGRATGLQGNLDP 291
Query: 292 MRLVVGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L G + + D + I + + IFNLGHG+ P+ DP + V+ +
Sbjct: 292 AILFAGEKTIADEIARITSEANAAISSGDAVGHIFNLGHGVLPETDPDVITRAVELIH 349
>gi|228990170|ref|ZP_04150140.1| Uroporphyrinogen decarboxylase [Bacillus pseudomycoides DSM 12442]
gi|228996256|ref|ZP_04155901.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock3-17]
gi|229003923|ref|ZP_04161729.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock1-4]
gi|228757292|gb|EEM06531.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock1-4]
gi|228763448|gb|EEM12350.1| Uroporphyrinogen decarboxylase [Bacillus mycoides Rock3-17]
gi|228769533|gb|EEM18126.1| Uroporphyrinogen decarboxylase [Bacillus pseudomycoides DSM 12442]
Length = 348
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 109/343 (31%), Positives = 180/343 (52%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKACKGEQTEYIPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP + +PI + + I + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEIHPE-EDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L+D
Sbjct: 124 LDTIRLLTNEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI AG +Q+FD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVVTYLKAQIKAGAKAVQVFDSWVGTVNVADYRLFIKPAMERIFTEVRTM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GAG++ + L+ + +GLDW + + A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAGHLANEWNDLS-LDVVGLDWRLSIEEARARGIHKAVQGNMDPSFLLAPWDVIRE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + ++FNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYVFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|229010471|ref|ZP_04167674.1| Uroporphyrinogen decarboxylase [Bacillus mycoides DSM 2048]
gi|228750814|gb|EEM00637.1| Uroporphyrinogen decarboxylase [Bacillus mycoides DSM 2048]
Length = 348
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 114/343 (33%), Positives = 184/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+V +G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 6 NETFLKVCRGERTEYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 65 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPE-DDVPYI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 124 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AGV +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 183 LADMVITYLKAQINAGVKAVQIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+ +
Sbjct: 241 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEE 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 300 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 342
>gi|111023816|ref|YP_706788.1| uroporphyrinogen decarboxylase [Rhodococcus jostii RHA1]
gi|110823346|gb|ABG98630.1| uroporphyrinogen decarboxylase [Rhodococcus jostii RHA1]
Length = 362
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 177/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+R
Sbjct: 22 DAPLLAAAEGRTPGRRPVWFMRQAGRSLPEYREIRSGIG-MLESCFDPALVCEITMQPVR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ + P L + +
Sbjct: 81 RHGVDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + R ++ LL
Sbjct: 139 AQAVQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPRTWHALLGT 197
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D + +L Q+ AGVD IQ+FD+ AG L E+ + R+ + V + I
Sbjct: 198 LADTTITFLQTQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEV--ESAKVPRI 255
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +
Sbjct: 256 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAARRVGPGKALQGNLDPAVLFAGPAAVE 314
Query: 303 DGVNAI------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + LV+ V S
Sbjct: 315 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 361
>gi|317052493|ref|YP_004113609.1| uroporphyrinogen decarboxylase [Desulfurispirillum indicum S5]
gi|316947577|gb|ADU67053.1| uroporphyrinogen decarboxylase [Desulfurispirillum indicum S5]
Length = 339
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 122/345 (35%), Positives = 185/345 (53%), Gaps = 12/345 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ G ++ P+W MRQAGRYLPEYR +RK + +FL+MC PE E+T+QPI
Sbjct: 3 NYDFINACYGKPVSRTPVWFMRQAGRYLPEYRAVRKNY-SFLEMCKLPEVACEVTVQPID 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV + +G ++ F N P + +PI T++ + +
Sbjct: 62 IIGTDAAILFSDILVPFEPMGLDLAF--NPAPVIANPIRTRQAVDSLRL--DAAGEVTFV 117
Query: 124 FQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I +L+K+L + + LIGF GAP+T+A Y + G K++ + Y + F+ L+
Sbjct: 118 YDAIKLLKKELASRNVPLIGFSGAPFTLACYAVEGAGSKNYPTLKRMMYSDPALFSDLMR 177
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
V+AEYL QI AG D IQIFD+ G L +++++ + ++ + R
Sbjct: 178 AFVVVTAEYLNNQIAAGADAIQIFDSWGGILSRQDYDHFVLPHMKSLMGQLNRS---VPI 234
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F ++L++ T ++ +GLDW +PL A + VQGNLDP L +++
Sbjct: 235 IFFIGNNAHLLESQM-STGADVMGLDWRIPLDDARQRAGNLSVQGNLDPTLLFADQKLLK 293
Query: 303 DGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V IL G FIFNLGHGITP+ NV +V+ V I
Sbjct: 294 ERVLDILGRNNGREGFIFNLGHGITPETPVDNVKMVVELVHEYPI 338
>gi|321252537|ref|XP_003192441.1| uroporphyrinogen decarboxylase [Cryptococcus gattii WM276]
gi|317458909|gb|ADV20654.1| Uroporphyrinogen decarboxylase, putative [Cryptococcus gattii
WM276]
Length = 380
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 123/356 (34%), Positives = 183/356 (51%), Gaps = 15/356 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L G P+W+MRQAGRYLPE+ ++R K +F + C TP LTLQPI
Sbjct: 23 KNDLLLRAASGEETPRAPVWVMRQAGRYLPEFLEVR-KHHSFFECCQTPSLASTLTLQPI 81
Query: 64 RRY-NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
RY DA+I+F DILV+ ALG V + GP + +P+ T + L
Sbjct: 82 DRYPRLDASIIFCDILVVPQALGLEVLMEPSRGPVLPNPLVTPDDLKRLREDVNVQKELG 141
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F+++++ RK L + LIGFCGAPWT+ +YM GG K +++ + Y+ A + LL
Sbjct: 142 YVFEAVTLTRKGLDGRVPLIGFCGAPWTLMAYMCEGGGSKTFEKSKSWLYKYPEASHELL 201
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR-----K 236
++DV A+ LI Q+ AG ++Q+FD+ AG L H+F+ +A + I S V
Sbjct: 202 RRIADVCADLLIGQVLAGAQMLQVFDSWAGELTPHQFKTFALPPLLHISSKVHSVLSQLS 261
Query: 237 YPNAKFISFAKGAGY----MLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
+P FAKGA L + T +GLDW+V E + K+ +QGN D
Sbjct: 262 HPGIPITLFAKGANAPSTFSLLSDPAHTGYATLGLDWTVDPVEVREIVGKKVNLQGNFDS 321
Query: 292 MRLVVGNQVMIDGVNA--ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L G + + V + G +I NLGHGITP V P+++ ++ V
Sbjct: 322 TVLYGGKEGIEKEVERLSVRWKEAGGGWIANLGHGITPNVKPEDMGWFLECVHKYS 377
>gi|329114718|ref|ZP_08243475.1| Uroporphyrinogen decarboxylase [Acetobacter pomorum DM001]
gi|326695849|gb|EGE47533.1| Uroporphyrinogen decarboxylase [Acetobacter pomorum DM001]
Length = 434
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 125/349 (35%), Positives = 196/349 (56%), Gaps = 13/349 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L G + PPP+WLMRQAGR+LPE+R +R K +FL C TP+ ELTLQPI+R
Sbjct: 86 KRLLRTLNGEALWPPPMWLMRQAGRFLPEFRAMRAKA-DFLTRCMTPDIATELTLQPIKR 144
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ D AILFSDIL++ A+G+++ FVE +GP + I +++ + P+ +
Sbjct: 145 FGMDGAILFSDILILPWAMGQSLEFVEGKGPILGAIRSEQDLA-KLDPARIAEITAPVLE 203
Query: 126 SISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+++ LRK+L P TL+GF GAP+TVA YM+ G ++ R AY
Sbjct: 204 TLTRLRKELNGPDKIGVAQPGATTLLGFTGAPFTVACYMVEGHGSREFAVTRQMAYAEPV 263
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
F+ L+D L+ +AEYL QI AG + + +FD+ AG L EF + +I+ A++
Sbjct: 264 LFDRLMDLLTRTTAEYLCKQIEAGAEAVMLFDSWAGLLSPSEFRKHVIAPSRQIVQAIKA 323
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRL 294
++P+ + I F + +G ++ Y R T + + LD + + +QGNLDP+ +
Sbjct: 324 RHPSTRIIGFPRLSGVLVAEYARETGVDVVALDTGADIEIVRSMLPEHVGIQGNLDPVSV 383
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G M AI + +FNLGHG+ PQ ++V +LV T+R
Sbjct: 384 LAGGDAMKREALAIREAGRGRAHVFNLGHGVLPQTPVEHVAELVNTIRE 432
>gi|325284659|ref|YP_004264122.1| Uroporphyrinogen decarboxylase [Deinococcus proteolyticus MRP]
gi|324316148|gb|ADY27262.1| Uroporphyrinogen decarboxylase [Deinococcus proteolyticus MRP]
Length = 402
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 121/343 (35%), Positives = 186/343 (54%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G P+W MRQAGRY+PEYR IR ++ L+ TPE E+TLQP+R
Sbjct: 60 DSAFLKAARGEKAAHTPLWFMRQAGRYMPEYRAIRAD-RSMLECIRTPELAAEITLQPVR 118
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
++ DAAILF+DIL +G ++ FV+ GPR+ +P+ + L + +
Sbjct: 119 AFDVDAAILFNDILTPLPVMGLDLDFVKGAGPRISNPLRSTRAVDLL-GVPAARESMPYT 177
Query: 124 FQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++I +L+ +L I LIGF GAP+T+ASY I GG +++ + Y A+ L+D
Sbjct: 178 AEAIRLLKPELDARGIPLIGFVGAPFTLASYAIEGGGSRNYEYTKQMMYAEPAAWFRLMD 237
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ V A+YL QI AG +QIFD+ AG L ++++ + + R+I AV+
Sbjct: 238 KLATVQADYLGEQIKAGAAAVQIFDSWAGALSRYDYQTFVWPATQRLIEAVKPY--GVPV 295
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I F G++L + R +++ +G+DW PL A +L K +QGNLDP+ L + +
Sbjct: 296 IYFGTDTGHLLGDIARY-ETDVVGVDWRTPLDTAWAQLNKGQAIQGNLDPLLLAAPWREL 354
Query: 302 IDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +LD G IFN+GHGI P NV + + V
Sbjct: 355 KHQVDRVLDEAAGRPGHIFNIGHGILPTTPMDNVRRVAEYVHE 397
>gi|226366252|ref|YP_002784035.1| uroporphyrinogen decarboxylase [Rhodococcus opacus B4]
gi|254767703|sp|C1B4A1|DCUP_RHOOB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|226244742|dbj|BAH55090.1| uroporphyrinogen decarboxylase [Rhodococcus opacus B4]
Length = 355
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 179/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+R
Sbjct: 15 DAPLLAAAEGRAPGRRPVWFMRQAGRSLPEYREIRSGIG-MLESCFDPALVCEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ + P L + +
Sbjct: 74 RHGVDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + + ++ LL
Sbjct: 132 AQAVQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPKTWHALLGT 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D + +L AQ+ AGVD IQ+FD+ AG L E+ + R+ + V + I
Sbjct: 191 LADTTITFLQAQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEV--ESAKVPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G+ +
Sbjct: 249 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAARRVGPGKALQGNLDPAVLFAGSAAVE 307
Query: 303 DGVNAI------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + LV+ V S
Sbjct: 308 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 354
>gi|34556803|ref|NP_906618.1| uroporphyrinogen decarboxylase [Wolinella succinogenes DSM 1740]
gi|45476820|sp|Q7MAA5|DCUP_WOLSU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|34482518|emb|CAE09518.1| UROPORPHYRINOGEN DECARBOXYLASE [Wolinella succinogenes]
Length = 340
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 126/341 (36%), Positives = 190/341 (55%), Gaps = 8/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ + PIW+MRQAGRYL EY Q R++ +FLD+C PE E+TLQP+ +
Sbjct: 3 FIDACKRQPTPYTPIWMMRQAGRYLTEYMQTRERAGSFLDLCKNPELACEVTLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILV+ +G + F + EGPR I TQ+ LL + N L ++++
Sbjct: 63 VDAAILFSDILVVPMEMGLELGFYQGEGPRFSQTIRTQKDLLLL--QEGAENRLGYVYEA 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +R+ L LIGFCG+PWT+A+YMI G K + ++ Y + + + +L +S+
Sbjct: 121 IHRIRESLHQEKALIGFCGSPWTLATYMIEGEGSKTYAHSKKMLYSDPKLLHAILAQVSE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
YL QI AGV+ + +FD+ A L E + ++ + I S V+ +YP+ + F
Sbjct: 181 ALKGYLAKQIEAGVNAVMVFDSWAAALEESVYFEFSWEYMKEIASFVKARYPHIPVMLFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KG L D + G+DWS P+ A +L +QGNL+P RL M +GV
Sbjct: 241 KGIAGFLDKI--EGDFDVFGVDWSTPMDLAKAKLGDRYVLQGNLEPARLY-DRAKMEEGV 297
Query: 306 NAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL ++G +FNLGHG+ P + +N ++LVK VR +
Sbjct: 298 DHILSIMGKESGHVFNLGHGMMPDLPRENAIELVKMVRQKS 338
>gi|2501646|sp|Q42855|DCUP_HORVU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|1016347|emb|CAA58039.1| uroporphyrinogen decarboxylase [Hordeum vulgare subsp. vulgare]
Length = 330
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 96/329 (29%), Positives = 166/329 (50%), Gaps = 4/329 (1%)
Query: 17 INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSD 76
+ PP+WLMRQAGRY+ Y+ + +K+ F + + VE++LQP + + D ILFSD
Sbjct: 1 VERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFKPDGVILFSD 60
Query: 77 ILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
IL + V+ +GP + DP+ T + ++ + Q++++LR ++
Sbjct: 61 ILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREF-VPEEWVPYVGQALNLLRGEVK 119
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
N ++GF GAP+T+ASY + GG K+ + + A+ + LL + A Y+ Q
Sbjct: 120 NEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKRMAFAEPAILHNLLQKFTTSMANYIKYQ 179
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
G +QIFD+ A L +FE ++ + +I+ +V+ +P+ I +A G+G +L+
Sbjct: 180 ADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKETHPDLPLILYASGSGGLLER 239
Query: 256 YRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
LT + + LDW+V ++ L VQGN+DP L + + + + GS
Sbjct: 240 L-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFITKRIYDTVQKAGS 298
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ NLGHGI +NV + +
Sbjct: 299 QGHVLNLGHGIKVGTPEENVAHFFEVAKG 327
>gi|303289663|ref|XP_003064119.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226454435|gb|EEH51741.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 366
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 102/363 (28%), Positives = 171/363 (47%), Gaps = 25/363 (6%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQA------------GRYLPEYRQIRKKFKNFLDMC 49
++ + ++ + + PP W+MRQA GRY+ EYR + K+ +F +
Sbjct: 3 SDVEPLLVRAAKSLPVERPPAWMMRQARSISRRSPYDRAGRYMKEYRDLAVKYPSFRERS 62
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYL 108
+ VE+TLQP R + D ILFSDIL A+G + +GP +D PI +
Sbjct: 63 ENTDLIVEITLQPWRAFQPDGVILFSDILTPLPAIGIPFEIDDYKGPILDQPIR--DAEG 120
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
L +L L+ L + ++++ LRK++ + ++GF GAPWT+A+Y++ GG + +
Sbjct: 121 LKSLHELDLDMLPFVGEALTELRKEVGDSAAVLGFVGAPWTLATYIVEGGSSSTYKTIKS 180
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGR 228
A + +L ++D Y+ QI AG +QIFD+ G L H +E ++ + R
Sbjct: 181 MAMTEPDTLHAILSAVADAVGTYVGYQIDAGAQCVQIFDSWGGQLPPHMWEVWSKPYIQR 240
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
++ VR +P +A G+G +L+ T + IGLDW++ + + VQGN
Sbjct: 241 VVDKVRASHPGTPLTLYANGSGGLLERMA-TTGVDCIGLDWTIDMEDGRRRVGDKAVQGN 299
Query: 289 LDPMRLVVGNQ---------VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+DP L + + V + G I NLGHG+ +NV
Sbjct: 300 VDPAVLFAPPEARSSITLIPAVEKAVQDVCAKAGPVGHILNLGHGVLVGTPEENVKAFFD 359
Query: 340 TVR 342
+
Sbjct: 360 AAK 362
>gi|167640255|ref|ZP_02398521.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0193]
gi|167511856|gb|EDR87236.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. A0193]
Length = 356
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 182/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G + P W MRQAGR PEYR+I++K+ + ++ + PE +T P+
Sbjct: 14 NETFLKACRGERTDYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+YN DAAIL+ DI+ A+G +V GP +D PI + + I+ + + I
Sbjct: 73 QYNVDAAILYKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYI 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L ++ + + LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D
Sbjct: 132 LDTIRLLTTEMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDK 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ YL AQI+AG +QIFD+ G + ++ + ++ RI + VR I
Sbjct: 191 LADMVITYLKAQINAGAKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA +++ + L + +GLDW +P+ A VQGN+DP L+ V+
Sbjct: 249 MHGVGAAHLVNEWHDLP-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEG 307
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ILD + +IFNLGHG+ P+V+P + L +
Sbjct: 308 HVKGILDQGMKQPGYIFNLGHGVFPEVNPDTLKRLTTFIHEYS 350
>gi|72162298|ref|YP_289955.1| uroporphyrinogen decarboxylase [Thermobifida fusca YX]
gi|123774674|sp|Q47NN7|DCUP_THEFY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|71916030|gb|AAZ55932.1| uroporphyrinogen decarboxylase [Thermobifida fusca YX]
Length = 361
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L + + P+W MRQAGR LPEYR++R+ L+ C P+ VE+TLQ
Sbjct: 20 TLQDSAFLRACRRQPVPHTPVWFMRQAGRSLPEYRKLREGVP-MLEACARPDMIVEITLQ 78
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RRYN DAAI FSDI+V A+G ++ GP + +PI ++ L + +
Sbjct: 79 PVRRYNVDAAIFFSDIMVPLKAIGVDLDIKPGVGPVVAEPIR--DLAATRRLRGLEPDDV 136
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++I L ++L + LIGF G P+T+ASY+I GG + H + Y + L
Sbjct: 137 PYVTEAIRELVRELGSR-PLIGFAGGPFTLASYLIEGGPSRHHEHTKALMYGAPEVWTEL 195
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ LS ++ E+L QI AG +Q+FD+ G L ++ I + + +
Sbjct: 196 MRRLSAITLEFLRVQIAAGASAVQLFDSWVGALSAEDYRANVLPYSSWIFAQLAEF--DV 253
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VPL A ++ +QGNLDP L
Sbjct: 254 PRIHFGVGTGELLGLLSE-AGADVVGVDWRVPLDQAARRVRPHTALQGNLDPAVLFAPWS 312
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + + +L + +FNLGHG+ P DP + LV+ V ++
Sbjct: 313 VVAERTDDVLARAKAAEGHVFNLGHGVLPTTDPAVLERLVEYVHTQ 358
>gi|85709808|ref|ZP_01040873.1| uroporphyrinogen decarboxylase [Erythrobacter sp. NAP1]
gi|85688518|gb|EAQ28522.1| uroporphyrinogen decarboxylase [Erythrobacter sp. NAP1]
Length = 342
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 133/338 (39%), Positives = 200/338 (59%), Gaps = 4/338 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+LE L+GN P+WLMRQAGRYLPEYR++R + FL++ Y E E+T+QPIRR+
Sbjct: 4 PLLETLKGNRQKIAPVWLMRQAGRYLPEYRELRAEKGGFLELVYDSEAAAEITVQPIRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G+ + F+ EGP++ P + + + P++++
Sbjct: 64 GFDGAILFSDILIVPHAMGQGLEFLAGEGPKLSP---TLLETTMGSFEPQFERFEPVYET 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ R ++ + +T++GF G+PWTVA+YMI+G KD G R+ AY++ + D +++
Sbjct: 121 VRQTRAQIADTVTMLGFAGSPWTVATYMIAGEGSKDQGPARLLAYRDPGLMQDICDRIAE 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
VS EYL QI AG + +Q+FD+ AG L EFE + +I +A++R +P I F
Sbjct: 181 VSVEYLRGQIDAGAEAVQLFDSWAGSLAPDEFERWVVAPNAKITAAIKRSHPETPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y R T +AIGLD ++ +A E+ +G PVQGN DP+ + G +
Sbjct: 241 KGAGAKLPGYARETGVDAIGLDETLDPVWAHEVLPDGMPVQGNFDPLLIEAGGPALAVRA 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL+ P +FNLGHGI ++V L+ VR
Sbjct: 301 RTILEAFEDRPHVFNLGHGIGQFTPIEHVEQLLAAVRG 338
>gi|3915203|sp|O18601|DCUP_DROVI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2317917|gb|AAB66372.1| uroprophyrinogen decarboxylase [Drosophila virilis]
Length = 386
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 123/366 (33%), Positives = 185/366 (50%), Gaps = 29/366 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V++ P+W+MRQAGRYLPE++++RK+ +F +C TPE E+T+QP+
Sbjct: 22 KNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKQ-HDFFTVCRTPELACEVTMQPL 80
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 81 RRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPICTPEDLK-RLTPDGALSRLTY 139
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + L
Sbjct: 140 VGDAITMMRHKLDGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLTNYPEDTKLFLI 199
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRKY 237
L+DV +YL Q+ AG ++Q+F++ A L + EF + + RI + ++
Sbjct: 200 LLTDVIVDYLEMQVIAGAQMLQVFESSAEHLSKEEFLLGSEPYLRRIRDDLVDRLTKKVI 259
Query: 238 PNAK-------------------FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE 278
P I FAKGAG+ LK L + IGLDW+V A
Sbjct: 260 PAVPLVSSYPNNIFTLLTYLISLLIIFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARA 318
Query: 279 -LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ +QGNLDP + + ++ G +I N+GHGITPQ ++ L
Sbjct: 319 VVGPNITLQGNLDPQSMYCEPNELRSLATEMVHKCGKSRYIANVGHGITPQTPITSMEVL 378
Query: 338 VKTVRS 343
V+ +
Sbjct: 379 VEAAHN 384
>gi|172045690|sp|Q0S1F6|DCUP_RHOSR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 355
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 177/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G P+W MRQAGR LPEYR+IR L+ C+ P E+T+QP+R
Sbjct: 15 DAPLLAAAEGRTPGRRPVWFMRQAGRSLPEYREIRSGIG-MLESCFDPALVCEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G ++ V GP + +P+ + P L + +
Sbjct: 74 RHGVDAAILFSDIVVPLKAAGIDLDIVAGTGPVVANPVRSIADVAALPR--LVPEEVGAV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q++ +L +L LIGF GAP+T+ASY++ GG ++H + + + + R ++ LL
Sbjct: 132 AQAVQLLTAEL-GSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSDPRTWHALLGT 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D + +L Q+ AGVD IQ+FD+ AG L E+ + R+ + V + I
Sbjct: 191 LADTTITFLQTQLRAGVDAIQLFDSWAGALSLAEYREFVLPHSERVFAEV--ESAKVPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW +PL A + +QGNLDP L G +
Sbjct: 249 HFGVGTGELLGAMGE-AGADVVGVDWRIPLDVAARRVGPGKALQGNLDPAVLFAGPAAVE 307
Query: 303 DGVNAI------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I G+ IFNLGHG+ P DP + LV+ V S
Sbjct: 308 KQVRRITAEADAALAAGATGHIFNLGHGVLPDTDPGALTALVELVHS 354
>gi|320352977|ref|YP_004194316.1| uroporphyrinogen decarboxylase [Desulfobulbus propionicus DSM 2032]
gi|320121479|gb|ADW17025.1| uroporphyrinogen decarboxylase [Desulfobulbus propionicus DSM 2032]
Length = 341
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 190/343 (55%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G P+W MRQAGRYLP+Y+++R + +FL++C TPE E+TLQP+
Sbjct: 2 NDTFLQACRGERTAYTPVWFMRQAGRYLPQYQKVRGQV-SFLELCKTPELATEVTLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ FDAAILFSDIL+ +A+ ++ F E GP DP+ +Q+ + + + + +
Sbjct: 61 LFGFDAAILFSDILIPMEAMRLSLEFHEGRGPIFADPVRSQKAVD-DLVVPVPEEAVPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +LR++L + LIGF GAP+T+A+Y+I GG K + ++ R ++ L+
Sbjct: 120 LETIRLLRREL--RVPLIGFAGAPFTLATYLIEGGSSKVFLNTKKMMFREPRLYHNLMAK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ ++ YL AQ AG +Q+FD+ G L ++E +A V II+ +R + I
Sbjct: 178 ITACTSAYLQAQARAGAQALQLFDSWVGILAPCDYEEFALPYVRSIITDLRATT-DVPII 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
FA G L ++ +G DW +P+ A VQGNLDP+ L + + + +
Sbjct: 237 YFAN-NGATLTRMTTTVGADVLGFDWRLPIGEAAARSGRHAVQGNLDPLALFLPKERLEE 295
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++A+L D + +IFNLGHGI P+ P+ V V+ V
Sbjct: 296 RIHAMLTDARDARGYIFNLGHGILPETPPEQVRIAVEAVHRFS 338
>gi|52079499|ref|YP_078290.1| uroporphyrinogen decarboxylase [Bacillus licheniformis ATCC 14580]
gi|52002710|gb|AAU22652.1| uroporphyrinogen III decarboxylase [Bacillus licheniformis ATCC
14580]
Length = 353
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 8 NDTFLKACRGEKAAHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y+ DAAIL+ DI+ +G +V GP +D PIT+ +D ++ +
Sbjct: 67 QYDVDAAILYKDIMTPLPGIGVDVEIKNGIGPVIDQPITSLADVEKLGELDPQ-EHIPYV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + + F Y A++ L+
Sbjct: 126 LETIRLLTEE-QLNVPLIGFTGAPFTLASYMIEGGPSKNYNKTKAFMYSQPAAWDLLMKK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A Y+ AQI AG IQ+FD+ G L ++ Y ++ + ++++ + I
Sbjct: 185 LGKMAAVYVKAQIRAGAKAIQVFDSWVGALNAGDYCRYIKPTMDVLFKELKKE--DVPLI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L D + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 243 MFGVGASHLATEWHDL-DLDVVGLDWRMSVQEARDKGLTKTLQGNLDPSILLAPWEVIEE 301
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
AILD + + FIFNLGHGI P+V P + L V
Sbjct: 302 RTKAILDQGMQTDRFIFNLGHGIFPEVSPDTLKKLTAFVHEYS 344
>gi|332667519|ref|YP_004450307.1| Uroporphyrinogen decarboxylase [Haliscomenobacter hydrossis DSM
1100]
gi|332336333|gb|AEE53434.1| Uroporphyrinogen decarboxylase [Haliscomenobacter hydrossis DSM
1100]
Length = 347
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 187/344 (54%), Gaps = 8/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L V +G + PPIWLMRQAGR LP+YR +R KF F + + P E T+QPI
Sbjct: 9 QNDLFLRVAKGERSDRPPIWLMRQAGRVLPQYRALRSKFPGFREFLFEPAAAAEATIQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAI+FSDILV+ +A+G VE GP I T + + + + +
Sbjct: 69 DELGVDAAIIFSDILVVPEAMGLPYDMVEKRGPLFPKTIQTAQDIAQLQSGEAAADNMEY 128
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++++ I +++L + LIGF GAPWT+ +YMI G K + + F Y+ + LL+
Sbjct: 129 VYEALRITKRELKGRVPLIGFAGAPWTIFAYMIEGQGSKTFSKAKQFLYREPVLSHLLLE 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++D + YL +I G D+IQ+FD+ AG L +++ +A +G+I +A+
Sbjct: 189 RITDTTIAYLKRKIANGADLIQLFDSWAGILSPAQYKTFATHYIGKICAAITE----VPI 244
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
F+KGA + L++ L + IGLDW++ + A + + +QGNLDP L ++ +
Sbjct: 245 TVFSKGAWFALEDIAAL-NCQVIGLDWNITPAEARARVGENLVLQGNLDPCFLYADHKTI 303
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G +++ G I NLGHG+ P ++ +V V TV++ +
Sbjct: 304 RAGAIQMMEDFG-QKHIVNLGHGLYPDIELDSVRVFVDTVKAYR 346
>gi|225461671|ref|XP_002285451.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 409
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 100/343 (29%), Positives = 174/343 (50%), Gaps = 5/343 (1%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP
Sbjct: 51 DSDPLLVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQP 110
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
++ D I+FSDIL A G E GP + PI ++E + ID L L
Sbjct: 111 WEAFHPDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEEGLKVLHPID--LKKLH 168
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL
Sbjct: 169 FVGESLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALL 228
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+ +EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P
Sbjct: 229 SHLTQAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTP 288
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
+ + G G +L+ + T + IGLDW+V ++ L +QGN+DP L
Sbjct: 289 IVLYINGNGGLLERM-KGTGVDVIGLDWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPA 347
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D + ++ G I NLGHG+ + V + R+
Sbjct: 348 LTDEIQRVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARN 390
>gi|291277044|ref|YP_003516816.1| uroporphyrinogen decarboxylase [Helicobacter mustelae 12198]
gi|290964238|emb|CBG40087.1| uroporphyrinogen decarboxylase [Helicobacter mustelae 12198]
Length = 340
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 127/339 (37%), Positives = 182/339 (53%), Gaps = 6/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ + PIW+MRQAGRYL EYR R K +FLD+C E+TLQP+ N
Sbjct: 3 FIDACKRLETPYTPIWMMRQAGRYLEEYRATRAKAGSFLDLCQDVTLATEVTLQPVEILN 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDIL+I +G + F+ EGPR + D F L ++ +I
Sbjct: 63 VDAAILFSDILLIPLEMGLPLEFIAGEGPRFQKSIESYSDVCALKKDAF-ERLDYVYDTI 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S +R +LP LIGFCGAPWT+A+YMI G K + +++ Y N + ++LL ++D
Sbjct: 122 SSVRARLPQDKALIGFCGAPWTLATYMIEGEGSKTYTKSKKMLYANPQTMHYLLKQITDE 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG + + IFD+ A L + + ++ + I V+ +P+ I F K
Sbjct: 182 LKGYLTKQIQAGANAVMIFDSWANALAKDAYFEFSWGYMKDIAKHVKMHHPDIPVILFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G LK+ D + G+DWS PL A L K+ +QGNL+P L M GV+
Sbjct: 242 GVAGYLKHI--DGDFDVFGVDWSTPLELAKTLLGKKYVLQGNLEPCCLY-HEDAMEMGVD 298
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL V+G P IFNLGHG+ P + +N + LV+ + +
Sbjct: 299 EILAVMGKKPGHIFNLGHGMLPDLPRENAIKLVELIHQK 337
>gi|255568118|ref|XP_002525035.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
gi|223535697|gb|EEF37362.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
Length = 429
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 103/344 (29%), Positives = 175/344 (50%), Gaps = 7/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++ +G ++ PP W+MRQAGRY+ YR++ +K+ +F + T + VE++LQP
Sbjct: 73 DPLLVKAARGEPVSRPPAWMMRQAGRYMAVYRKVAEKYPSFRERSETTDLIVEISLQPWE 132
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLP 122
++ D I+FSDIL A G E GP + PI ++E + L+P + L L
Sbjct: 133 AFHPDGVIIFSDILTPLPAFGVPFDIEEVRGPVIQTPICSEEGLKALHP---IELEKLHF 189
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ S+ ILR+++ ++GF GAPWT+A+Y++ GG + + + + LL
Sbjct: 190 VGDSLRILRREVDGRAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRALLS 249
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +EY++ Q+ +G IQIFD+ G L ++ ++ + ++ VR K P
Sbjct: 250 HLTQAISEYIVFQVESGAQCIQIFDSWGGQLPPEMWDCWSKPYIEEVVRKVRSKCPEIPL 309
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
+ + G G +L+ + T + IGLDW+V ++ L VQGN+DP L +
Sbjct: 310 VLYINGNGGLLERM-KGTGVDVIGLDWTVDMADGRKRLGSGISVQGNVDPAYLFSPLSAL 368
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
D + ++ G I NLGHG+ + V + RS K
Sbjct: 369 TDEIQRVVRCAGPKGHILNLGHGVLVGTPEEAVAHFFEVARSLK 412
>gi|307106771|gb|EFN55016.1| hypothetical protein CHLNCDRAFT_48884 [Chlorella variabilis]
Length = 347
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 102/335 (30%), Positives = 170/335 (50%), Gaps = 5/335 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G I P W+MRQAGRY YR + K +F + + VE++LQP + +
Sbjct: 1 MVRAARGEAIERAPCWMMRQAGRYQKAYRDLALKHPSFRERSENTDLIVEISLQPWQSFT 60
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D I+FSDIL A G +N+GP + +PI + E ID L L + +S
Sbjct: 61 PDGVIIFSDILTPLPAFGIPFEIDDNKGPLLDNPIRSTEQLKQLHAID--LQQLSFVGES 118
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ++R+++ ++GF G PWT+A+Y++ G + + + + + LL ++D
Sbjct: 119 LGLIRQEVAGRAAVLGFVGCPWTLATYVVEGASSSIYKNIKTMMFNEPQLLDSLLSHIAD 178
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
AEY+ QI +G D I +FD+ G L +++ ++ V RI+ V+ +P +A
Sbjct: 179 QIAEYVKFQIDSGADCIMMFDSWGGQLPPKQWDRWSRPYVERIVRQVKATHPRTPLTLYA 238
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G+G ML+ + T ++ IGLDW+V ++ A L VQGN+DP+ L + + V
Sbjct: 239 NGSGGMLERMGQ-TGADVIGLDWTVDMADARRRLGAGVAVQGNVDPVVLFGSEAAIEEAV 297
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L G G I NLGHG+ ++V +
Sbjct: 298 RDCLTKAGEGGHILNLGHGVLVGTPEESVAFMFDL 332
>gi|114571512|ref|YP_758192.1| uroporphyrinogen decarboxylase [Maricaulis maris MCS10]
gi|122314948|sp|Q0AKD9|DCUP_MARMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114341974|gb|ABI67254.1| uroporphyrinogen decarboxylase [Maricaulis maris MCS10]
Length = 345
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 152/347 (43%), Positives = 215/347 (61%), Gaps = 4/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN+ K+ IL+VL G ++PPP+WLMRQAGRYL EYRQ+R + KNF+D C++P+ E+T
Sbjct: 1 MNDLTKKPILQVLAGETVSPPPVWLMRQAGRYLAEYRQVRSRAKNFIDFCFSPDLAAEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPIRR+ FDAAILF+DIL++ ALGR V FV EGP+++P ++ L + +
Sbjct: 61 LQPIRRFGFDAAILFADILLVPIALGRKVWFVTGEGPQLEPFDPRQFEELRLDQTEAV-- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L I +++ + +LP+ T+IGF G+PWTVA+YM+ GG KD + RV A++ AF+
Sbjct: 119 LGSIGETLKRVVPELPDTTTMIGFAGSPWTVATYMVEGGGSKDRFRTRVAAWEYPEAFDG 178
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD ++DV+AEYLI Q +G +V+++FD+ A L E FE R RI+ AVR +
Sbjct: 179 MLDRIADVTAEYLIMQARSGAEVLKLFDSWAEGLPEPLFERVVIRPTKRIVDAVRAAGID 238
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F +GAG + Y R T AI +D V ++ + G PVQG+LDP L G
Sbjct: 239 VPIIGFPRGAGTLYPRYARETGVTAIAVDTGVDPAWIQSVLPAGMPVQGHLDPSVLRAGG 298
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ +LD P IFNLGHGITP V +V L+ +R
Sbjct: 299 AALDGEVDRLLDQWAGRPHIFNLGHGITPDVPVAHVEQLLARIRDRS 345
>gi|255070353|ref|XP_002507258.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522533|gb|ACO68516.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 391
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 114/343 (33%), Positives = 170/343 (49%), Gaps = 4/343 (1%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L V +G + PP+WLMRQAGRY+ E+R+ K+ F TP+ +EL+LQ
Sbjct: 29 SSSDPLLLRVARGEQADRPPVWLMRQAGRYMSEFREYSNKYG-FRHRSETPDIAIELSLQ 87
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P R + D I+FSDIL A+G V+ +GP + +P+ T E +D L
Sbjct: 88 PWRAFKPDGVIMFSDILTPLPAIGVEFDVVKGKGPVISNPVRTTEDLNRLKCLDDPDLSL 147
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I + +S LR ++ TL+GF G PWT+A+Y I G + + QN +
Sbjct: 148 PFIREILSSLRSEVDGKSTLLGFIGTPWTLAAYSIEGRSDRHLLITKQIMNQNPEFLHQY 207
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DV Y+ QI G V+Q+FD+ A L +F ++ R+I+AV+ KYP+
Sbjct: 208 LAHLADVLIVYVCHQIDCGAQVVQLFDSWAHHLSPQQFAEFSLPYSERVIAAVKAKYPDV 267
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I A G L+ T ++ IGLDWS ++ A + + +QGN+DPM L
Sbjct: 268 PLILHANGGVGKLEIMTAST-ADVIGLDWSTDMADARRIFGPDRVLQGNMDPMYLFADEG 326
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V + GSG I N+GHG+ NV R
Sbjct: 327 RIRREVAQNIAAAGSGKHILNVGHGVVQGTPEANVGIFCDAAR 369
>gi|52784864|ref|YP_090693.1| uroporphyrinogen decarboxylase [Bacillus licheniformis ATCC 14580]
gi|319646713|ref|ZP_08000942.1| uroporphyrinogen decarboxylase [Bacillus sp. BT1B_CT2]
gi|52347366|gb|AAU40000.1| HemE [Bacillus licheniformis ATCC 14580]
gi|317391301|gb|EFV72099.1| uroporphyrinogen decarboxylase [Bacillus sp. BT1B_CT2]
Length = 354
Score = 384 bits (987), Expect = e-105, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G P+W MRQAGR PEYR +++K+ F ++ + PE +T P+
Sbjct: 9 NDTFLKACRGEKAAHVPVWYMRQAGRSQPEYRALKEKYGLF-EITHQPELCAYVTRLPVE 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y+ DAAIL+ DI+ +G +V GP +D PIT+ +D ++ +
Sbjct: 68 QYDVDAAILYKDIMTPLPGIGVDVEIKNGIGPVIDQPITSLADVEKLGELDPQ-EHIPYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + + F Y A++ L+
Sbjct: 127 LETIRLLTEE-QLNVPLIGFTGAPFTLASYMIEGGPSKNYNKTKAFMYSQPAAWDLLMKK 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L ++A Y+ AQI AG IQ+FD+ G L ++ Y ++ + ++++ + I
Sbjct: 186 LGKMAAVYVKAQIRAGAKAIQVFDSWVGALNAGDYCRYIKPTMDVLFKELKKE--DVPLI 243
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA ++ + L D + +GLDW + + A + +QGNLDP L+ +V+ +
Sbjct: 244 MFGVGASHLATEWHDL-DLDVVGLDWRMSVQEARDKGLTKTLQGNLDPSILLAPWEVIEE 302
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
AILD + + FIFNLGHGI P+V P + L V
Sbjct: 303 RTKAILDQGMQTDRFIFNLGHGIFPEVSPDTLKKLTAFVHEYS 345
>gi|317121213|ref|YP_004101216.1| uroporphyrinogen decarboxylase [Thermaerobacter marianensis DSM
12885]
gi|315591193|gb|ADU50489.1| uroporphyrinogen decarboxylase [Thermaerobacter marianensis DSM
12885]
Length = 356
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 99/339 (29%), Positives = 169/339 (49%), Gaps = 6/339 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
Q+ L + ++ P+W MRQAGR PE+R +R+++ F+++ P+ E+T+ P+ R
Sbjct: 5 QRFLAACRRQPVDRTPVWFMRQAGRIFPEFRALRRQYG-FVELMQHPDLCAEITVMPVER 63
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILF+DI+ LG + R GP + L L P+ +
Sbjct: 64 LGVDAAILFADIMTPLQPLGVDYRIEPGVGPVVGQPLAAAADLGRLRRFDPREELAPVLE 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R+ L + + LIGF GAP+T+A Y+I G ++ + R Y + ++ L++ L+
Sbjct: 124 TVRLVRRALGDRVPLIGFAGAPFTLACYLIEGRPSREFHRARALMYGDPAFWHGLMERLA 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ +YL AQ+ AGV +Q+FD+ G LG + + R++ + I F
Sbjct: 184 ETVLDYLRAQVEAGVQAVQLFDSWVGGLGPAAYRRFVLPYSRRVLEGLGDL--GVPRIHF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L + + +G+DW V L A E + + +QGNLDP L+ + +
Sbjct: 242 GTGNAALLPLMAQ-AGAEVVGVDWRVDLDRAWEAIGPDKAIQGNLDPAALLAPFDQVEEQ 300
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+L G IFNLGHG+ P+ ++ LV+ V
Sbjct: 301 ARDVLRRAAGRPGHIFNLGHGVLPETPVDHLRRLVELVH 339
>gi|254468357|ref|ZP_05081763.1| uroporphyrinogen decarboxylase [beta proteobacterium KB13]
gi|207087167|gb|EDZ64450.1| uroporphyrinogen decarboxylase [beta proteobacterium KB13]
Length = 351
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 126/349 (36%), Positives = 184/349 (52%), Gaps = 6/349 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN L+ L+ + P W+MRQAGRYLPEYR RK +F+D+C + E+T+
Sbjct: 1 MNLLNDSFLKTLRLGKTSYTPAWIMRQAGRYLPEYRDTRKNAGSFMDLCRNTSFATEVTM 60
Query: 61 QPIRRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
QP+ RY DAAILFSDIL I DA+G + F+ EGP E + +I +
Sbjct: 61 QPLERYPQLDAAILFSDILTIPDAMGLGLNFLPGEGPTFSNPLIDESSVHKLDIP-SMEK 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L +F +I ++ L N + LIGF G+PWT+A+YM+ G D + AY+ +
Sbjct: 120 LSYVFDAIRSIKDALQNRVPLIGFAGSPWTLATYMVEGKGGSDFLNVKKMAYERDDLMHH 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYP 238
+L ++ ++YL QI AG D + IFD+ G L E+E + + II + +
Sbjct: 180 ILKINAETVSQYLAEQIKAGADAVMIFDSWGGALSHLEYEKLSLNYMKVIIDNLNILGFG 239
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVG 297
+ I F KG G + + SNAIGLDW L A EL K+ +QGN+DP L+
Sbjct: 240 DVPKIIFTKGGGQWINQQLK-AGSNAIGLDWQTSLKTARELTKDKVALQGNMDPAILLGS 298
Query: 298 NQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ + V +++D G G IFNLGHGIT DP V ++ ++
Sbjct: 299 DKKIEGTVKSVIDDYGHGEGHIFNLGHGITQFTDPAKVTLMLDVLKEYS 347
>gi|115438661|ref|NP_001043610.1| Os01g0622300 [Oryza sativa Japonica Group]
gi|75333178|sp|Q9AXB0|DCUP1_ORYSJ RecName: Full=Uroporphyrinogen decarboxylase 1, chloroplastic;
Short=UPD1; Short=URO-D1; Flags: Precursor
gi|12313673|dbj|BAB21078.1| putative uroporphyrinogen decarboxylase [Oryza sativa Japonica
Group]
gi|113533141|dbj|BAF05524.1| Os01g0622300 [Oryza sativa Japonica Group]
gi|215741143|dbj|BAG97638.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618875|gb|EEE55007.1| hypothetical protein OsJ_02650 [Oryza sativa Japonica Group]
Length = 402
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 108/345 (31%), Positives = 179/345 (51%), Gaps = 6/345 (1%)
Query: 2 NERKQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + ++ +G + PP W+MRQAGRY+ EY+ + K+ +F + T E VE+TL
Sbjct: 42 STEEPLLVRAARGEDGLPRPPAWMMRQAGRYMAEYQALAKRHPSFRERSETTELIVEITL 101
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP R + D ILFSDIL A+G +++GP + P+ ++E ID
Sbjct: 102 QPWRAFAPDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTPID--FEK 159
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + +
Sbjct: 160 LRFVGESLKILRTEIDGQAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRG 219
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D +EY+I Q+++G IQIFD+ G L H +E ++ + +I++ ++ + PN
Sbjct: 220 LLSHLADAISEYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPN 279
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
+ + G G +L+ T + IGLDW+V ++ L + VQGN+DP L
Sbjct: 280 VPLVLYINGNGGLLERMTD-TGVDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPL 338
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ D ++ ++ G I NLGHG+ + + V RS
Sbjct: 339 PVLTDEIHRVVKSAGPKGHILNLGHGVLVKTPEEAVAHFFDVTRS 383
>gi|257056401|ref|YP_003134233.1| uroporphyrinogen decarboxylase [Saccharomonospora viridis DSM
43017]
gi|256586273|gb|ACU97406.1| uroporphyrinogen decarboxylase [Saccharomonospora viridis DSM
43017]
Length = 353
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 117/347 (33%), Positives = 180/347 (51%), Gaps = 14/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+L +G P+W MRQAGR LPEYR++R+ L C+ PE E+TLQP+
Sbjct: 13 SDAPLLVAARGGTPAHVPVWFMRQAGRSLPEYRKVREGVP-MLTACFDPELLAEITLQPV 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDI+V A G ++ V GP + P+ ++ P ++ L P
Sbjct: 72 RRHGVDAAILFSDIVVPLYAAGTDIDIVAGTGPVVAHPVRSRADVAALPRLE--PEQLKP 129
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + +L ++L LIGF GAP+T+ASY+I GG KDH + + + ++ L
Sbjct: 130 VADGVRLLVEQL-GRTPLIGFAGAPFTLASYLIEGGPSKDHARTKALMHGEPELWHELAG 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + +L Q+ AGVD +Q+FD+ AG L ++ + ++ +
Sbjct: 189 ALAQTALTFLRVQLDAGVDAVQLFDSWAGALSAKDYREFVLPHSTTVLEGIASY--GVPR 246
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-----QKEGPVQGNLDPMRLVVG 297
I F G G +L + R ++ +G+DW VPL A+ + VQGNLDP L
Sbjct: 247 IHFGVGTGELLADMRD-AGADVVGVDWRVPLDEAVRRLTTSDRPAPVVQGNLDPALLTAP 305
Query: 298 NQVMIDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V I+ + +G IFNLGHG+ P+ DP+ + +V+ V S
Sbjct: 306 WPVIEAEVRRIVSEGRAAGGHIFNLGHGVLPETDPEVLTRIVELVHS 352
>gi|296284838|ref|ZP_06862836.1| uroporphyrinogen decarboxylase [Citromicrobium bathyomarinum JL354]
Length = 341
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 129/331 (38%), Positives = 189/331 (57%), Gaps = 4/331 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L+ L+G PP+W MRQAGRYLPEYR +R + FLD+ Y E E+TLQP+RR+
Sbjct: 4 PLLDCLRGERAESPPVWFMRQAGRYLPEYRALRAEKGGFLDLVYDSEAACEVTLQPVRRF 63
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
FD AILFSDIL++ A+G+ + F+ EGP++ P + + + PI+Q+
Sbjct: 64 GFDGAILFSDILIVPHAMGQTLEFLAGEGPKLSP---PLVESELAGLSADPSRYDPIYQT 120
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + RK+L +T++GF G+PWTVA+YMI+G +D R AY + ++ + D
Sbjct: 121 VRLCRKQLAPDVTMLGFAGSPWTVATYMIAGEGSRDQHAARAMAYADPGKVEAIIGAIID 180
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ YL QI AG + +Q+FD+ AG L EF+ + RI++A++ +P+ I F
Sbjct: 181 QTVGYLRGQIDAGAEAVQLFDSWAGSLAPDEFDRWVIEPNARIVAAIKDSHPDIPVIGFP 240
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG L Y T +A+GLD ++ +A L K PVQGNLDPM L+ G + +
Sbjct: 241 KGAGEKLPRYAERTGVDAVGLDETLDPEWAHAALPKGMPVQGNLDPMLLLAGGDRLDHTI 300
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLD 336
IL L P +FNLGHGI +V
Sbjct: 301 RHILSALADRPHVFNLGHGIDRHTPIAHVEH 331
>gi|313679942|ref|YP_004057681.1| uroporphyrinogen decarboxylase [Oceanithermus profundus DSM 14977]
gi|313152657|gb|ADR36508.1| uroporphyrinogen decarboxylase [Oceanithermus profundus DSM 14977]
Length = 341
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 121/343 (35%), Positives = 179/343 (52%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L +G P+W MRQAGRY PEYR+IR+++ ++ PE T E+T P++
Sbjct: 2 NDVFLRAARGEPTPYTPVWFMRQAGRYQPEYRKIRERY-TLPEIVRHPEVTAEVTRLPVQ 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
++ FDAAILF+DI +G ++ VE +GP + +PI T E + +
Sbjct: 61 QFGFDAAILFADITTPLYGMGFDLDIVEGKGPVIHNPIDTPEDVRRIHLFSAE-AHTPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL+ +L + LIGF GAP+T+ASY+I GG K+ + + F Y A++ L+
Sbjct: 120 LEAIRILKAEL--EVPLIGFAGAPFTLASYLIEGGPSKNFVKVKGFMYAEEEAWDLLMRT 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ EYL AQ AG D +Q+FD+ G L H++E Y A + R+ A++ +
Sbjct: 178 LTNAMVEYLSAQARAGADALQVFDSWVGRLTRHDYERYVAPHMRRLFEALKPL--GVPVV 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F ++L + IG+D + PL +A + PVQGNLDP L V+
Sbjct: 236 HFGTQTMHLLSPMAEAGG-DVIGVDTTTPLDWARDRLGARPVQGNLDPTLLFAPEPVLAR 294
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GV A+L G IFNLGHGI P P V V+ V S
Sbjct: 295 GVEAVLSANAGRPGHIFNLGHGILPGTPPDAVRRAVELVHSLS 337
>gi|317128191|ref|YP_004094473.1| uroporphyrinogen decarboxylase [Bacillus cellulosilyticus DSM 2522]
gi|315473139|gb|ADU29742.1| uroporphyrinogen decarboxylase [Bacillus cellulosilyticus DSM 2522]
Length = 351
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 184/347 (53%), Gaps = 17/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + ++ P+W MRQAGR PEYR+++KK+ + ++ + PE +T P+
Sbjct: 8 NDLFLKACKKEAVDHVPVWYMRQAGRSQPEYRELKKKY-SLEEITHRPETCAYVTKLPVD 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIY----LLNPNIDLFLNY 119
+YN DAAIL+ DI+ A+G +V+ GP + +PI + + + P D
Sbjct: 67 QYNNDAAILYKDIMTPLPAIGVDVKIKSGIGPVISNPIESIKDVSNLGEITPEKD----- 121
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + ++I ILR +L + LI F GAP+T+ASYMI GG K++ Q + F Y A+
Sbjct: 122 VDFVLETIKILRGQL--EVPLISFSGAPFTLASYMIEGGPSKNYNQTKSFMYSQKEAWFL 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L+ ++ Y+ AQI AG IQIFD+ G L + ++ + + RI + ++ + +
Sbjct: 180 LMDKLASMTISYVKAQIKAGAQAIQIFDSWVGALNQEDYRTFVKPVMHRIFTELKGE--D 237
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ ++ L + +GLDW P+ A E VQGNLDP L+
Sbjct: 238 VPLIMFGVGARHLTSDWHDLP-LDVVGLDWRYPIKEARENGITKAVQGNLDPSVLMAPWN 296
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + I+D + FIFNLGHG+ P++ P + L V
Sbjct: 297 VIEEKAKEIIDEGMKQPGFIFNLGHGVFPEIQPATLKRLTSFVHEYS 343
>gi|159037110|ref|YP_001536363.1| uroporphyrinogen decarboxylase [Salinispora arenicola CNS-205]
gi|157915945|gb|ABV97372.1| uroporphyrinogen decarboxylase [Salinispora arenicola CNS-205]
Length = 365
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 114/342 (33%), Positives = 176/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + P+W MRQAGR LPEYR+IR + L+ C P+ E+TLQP+R
Sbjct: 22 DSPFVRACRREPGPHTPVWFMRQAGRSLPEYRKIRSEVA-MLESCRRPDLITEITLQPVR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G + V GP + DP+TT+ ID + + +
Sbjct: 81 RHKVDAAILFSDIVVPVAAAGVALDIVPGTGPVVTDPVTTRADVERIRLIDR--DDVHYV 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +L +L LIGF GAP+T+ASY++ GG + H + + Y + ++ L
Sbjct: 139 DEAVRMLVDELGG-TPLIGFAGAPFTLASYLVEGGPSRTHVRTKALMYGDPDLWHALAGR 197
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++++ +L QI AGV +Q+FD+ AG L E ++ Y +++ + I
Sbjct: 198 LAEMTLAFLKVQIDAGVSAVQLFDSWAGALSEADYRRYVLPHSRAVLAGLADA--GVPRI 255
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G ++ ++ +G+DW PL A + E VQGNLDP L V+
Sbjct: 256 HFGVGTGELIAAMGE-AGADVVGVDWRTPLDVATRRIGPERAVQGNLDPCLLFAPWPVIE 314
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L + P IFNLGHG+ P+ DP+ + +V V
Sbjct: 315 AEVRRVLAQGRAAPGHIFNLGHGVLPETDPEVLTRVVALVHE 356
>gi|289550451|ref|YP_003471355.1| Uroporphyrinogen III decarboxylase [Staphylococcus lugdunensis
HKU09-01]
gi|289179983|gb|ADC87228.1| Uroporphyrinogen III decarboxylase [Staphylococcus lugdunensis
HKU09-01]
Length = 344
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 109/346 (31%), Positives = 190/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL ++G P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MHNKNNAILNTIKGEKATHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAAIL+ DI+ +G +V GP + +PI + ID +
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIQSVNDVDKLTQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTQE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYRDEETWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L +S +Y++AQ+ AG ++IQIFD+ G L +++ Y ++ ++IS ++ K+ +
Sbjct: 178 LMNHLVSISIDYVVAQVEAGAELIQIFDSWVGALNVQDYKYYIKPAMQKLISGIKEKH-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + + A + +QGNLDP L+
Sbjct: 237 VPIILFGVGASHLIDEWNDLP-IDVLGLDWRISIIQAQSMGISKTLQGNLDPALLLAPWP 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + + ILD L G IFNLGHG+ P+V+P + + + V
Sbjct: 296 VIEERLKNILDQGLMYGKHIFNLGHGVFPEVNPDTLKRVSQFVHDY 341
>gi|255712319|ref|XP_002552442.1| KLTH0C04994p [Lachancea thermotolerans]
gi|238933821|emb|CAR22004.1| KLTH0C04994p [Lachancea thermotolerans]
Length = 368
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 112/352 (31%), Positives = 181/352 (51%), Gaps = 15/352 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL G + PP W+MRQAGRYLPEY +++ ++F + C E E+T+QP+
Sbjct: 13 KNDLILRAALGQPVERPPCWIMRQAGRYLPEYHKVKDG-RDFFETCRDAEIASEITIQPV 71
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID-LFLNY 119
RRY DAAI+FSDILVI ALG V +E +GP + I T+E + L
Sbjct: 72 RRYAGLLDAAIIFSDILVIPQALGMRVEMLEGKGPHFPELIRTEEDMKKVLDYHTDVLKE 131
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L F++I++ R KL + L+GFCG PWT+ YM GG + + + ++ +
Sbjct: 132 LDWAFRAITVTRHKLGGQVPLLGFCGGPWTLLVYMTEGGGSRLFRFAKQWLNESPELCHK 191
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-- 237
LL ++DV+ E+L Q+ AG ++Q+F++ G LG +F+ ++ + +I + +
Sbjct: 192 LLQKITDVAVEFLAQQVVAGAQMLQVFESWGGELGPRDFDEFSLPYIRQISKRLPHRLKE 251
Query: 238 ----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPM 292
F+KG+ Y L + NA+ LDW A+++ +QGNLDP
Sbjct: 252 LGIEEQIPLTIFSKGSWYALDKLCD-SGYNAVSLDWLWDPKDAVKVNAGRVTLQGNLDPG 310
Query: 293 RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++V+ V ++ G G +I N GHG P +DP+ + ++
Sbjct: 311 VIYGTDEVISKRVEEMITGFGGGKKQYIVNFGHGTHPFMDPEKIKFFLQECH 362
>gi|313903429|ref|ZP_07836820.1| uroporphyrinogen decarboxylase [Thermaerobacter subterraneus DSM
13965]
gi|313466250|gb|EFR61773.1| uroporphyrinogen decarboxylase [Thermaerobacter subterraneus DSM
13965]
Length = 356
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 100/341 (29%), Positives = 169/341 (49%), Gaps = 6/341 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
Q+ L + ++ P+W MRQAGR PE+R +R+++ F+++ P+ E+T+ P+ R
Sbjct: 5 QRFLAACRRQPVDRTPVWFMRQAGRIFPEFRALRRQYG-FVELMQHPDLCAEITVMPVER 63
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILF+DI+ LG + R GP + L L P+ +
Sbjct: 64 LGVDAAILFADIMTPLAPLGVDYRIEPGVGPVVGQPLAAAADLGRLRRFDPREELAPVLE 123
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++R+ L + + LIGF GAP+T+A Y+I G ++ + R Y + ++ L++ L+
Sbjct: 124 TVRLVRRALGDRVPLIGFAGAPFTLACYLIEGRPSREFHRARALMYGDPAFWHGLMERLA 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ +YL AQ+ AGV +Q+FD+ G LG + + R++ + I F
Sbjct: 184 ETVLDYLRAQVEAGVQAVQLFDSWVGGLGPAAYRRFVLPYSSRVLEGLADL--GVPRIHF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L + +G+DW V L A E + + +QGNLDP L+ + +
Sbjct: 242 GTGNAALLPLMAE-AGAEVVGVDWRVDLDRAWEAIGPDKAIQGNLDPAALLAPFDQVEEQ 300
Query: 305 VNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L G IFNLGHG+ P+ ++ LV+ V E
Sbjct: 301 ARDVLRRAAGRPGHIFNLGHGVLPETPVDHLRRLVELVHRE 341
>gi|21224363|ref|NP_630142.1| uroporphyrinogen decarboxylase [Streptomyces coelicolor A3(2)]
gi|256784451|ref|ZP_05522882.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
gi|289768330|ref|ZP_06527708.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
gi|6014940|sp|O69861|DCUP_STRCO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3169045|emb|CAA19243.1| uroporphyrinogen decarboxylase [Streptomyces coelicolor A3(2)]
gi|289698529|gb|EFD65958.1| uroporphyrinogen decarboxylase [Streptomyces lividans TK24]
Length = 355
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 176/343 (51%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEY ++R+ L+ C PE E+TLQP+R
Sbjct: 17 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYLKVREGIP-MLESCMRPELVAEITLQPVR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAA+ FSDI+V A+G ++ GP + +PI T+ L DL + +
Sbjct: 76 RHGVDAAVYFSDIVVPLKAIGIDLDIKPGVGPVIAEPIRTRAD--LARLRDLTPEDVAYV 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +L ++L LIGF GAP+T+ASY++ GG ++H + Y + + + LLD
Sbjct: 134 TEAFGLLTREL-GATPLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPQLWADLLDR 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ ++A +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 193 LAGITAAFLKVQIEAGASAVQLFDSWVGALSPADYRRSVLPASRKVFEAVSGY--GVPRI 250
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L G + +
Sbjct: 251 HFGVGTGELLGL-LGEAGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAGREAVE 309
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD G +FNLGHG+ P DP + LV+ V ++
Sbjct: 310 TKTREVLDAATGLEGHVFNLGHGVLPTTDPDALTRLVEYVHTQ 352
>gi|328950659|ref|YP_004367994.1| Uroporphyrinogen decarboxylase [Marinithermus hydrothermalis DSM
14884]
gi|328450983|gb|AEB11884.1| Uroporphyrinogen decarboxylase [Marinithermus hydrothermalis DSM
14884]
Length = 339
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 110/341 (32%), Positives = 173/341 (50%), Gaps = 9/341 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ +G P+W MRQAGRY PEYR+IR+++ ++ PE T E+T P+
Sbjct: 2 NEVFLKAARGETTPYTPVWFMRQAGRYQPEYRKIRERY-TLPEIVRHPEVTAEVTKLPVA 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILF+DI +G ++ VE +GP + +PI T + D + +
Sbjct: 61 QLGVDAAILFADITTPLYGMGFDLDIVEGKGPVIHNPIRTPKDLHRLQPFDPK-AHTPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L++ L + LIGF GAP+T+ASY+I GG ++ + + F Y A++ L+
Sbjct: 120 LEAIRLLKEDL--EVPLIGFAGAPFTLASYLIEGGPTRNFVRVKAFMYAEEEAWHQLMRA 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ YL AQ+HAG D +Q+FD+ G L ++ Y + R+ + + I
Sbjct: 178 LTEAMIAYLTAQVHAGADAVQVFDSWVGHLTASDYRRYVKPHMQRLFAGLSGL--GVPTI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F ++L+ + IG+D + P +A PVQGNLDP L V+
Sbjct: 236 HFGTRTMHLLEEMQAAGG-QVIGVDHTTPFDWARARLGATPVQGNLDPAVLFAPWPVVER 294
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L+ G IFNLGHGI P + V +V V
Sbjct: 295 EVLRVLEANAGRAGHIFNLGHGILPGTPVETVQRVVAFVHE 335
>gi|225874011|ref|YP_002755470.1| uroporphyrinogen decarboxylase [Acidobacterium capsulatum ATCC
51196]
gi|225792797|gb|ACO32887.1| uroporphyrinogen decarboxylase [Acidobacterium capsulatum ATCC
51196]
Length = 362
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 116/342 (33%), Positives = 177/342 (51%), Gaps = 9/342 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ + ++ P+W +RQAGRY+PEY +R K + LD+C PE E+T+ +
Sbjct: 23 RFVRACLRRPVDRTPVWFLRQAGRYMPEYMAVR-KHHSLLDICKRPEIAAEVTITAAEKL 81
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ DAAI+F+D+L+ + +G F EGP + P+ T E + L+ + Q
Sbjct: 82 DVDAAIIFADLLLPFECMGLPFEFQAGEGPVVHHPVRTLEDVERLRT--DKASELIYVAQ 139
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + + + +IGFCGAP+T+ASYMI GG + + + + F Y+ A+ LLD L
Sbjct: 140 AIEKVVAHFKDRLGIIGFCGAPYTLASYMIEGGGTRQYIETKKFMYRQPDAWKQLLDKLV 199
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V Y Q+ AG DVIQIFD+ AG L ++ + +++ V+ I F
Sbjct: 200 TVLTAYARQQVEAGADVIQIFDSWAGSLSVEDYREFVLPVTRQLVREVQAL--GVPVIYF 257
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
+L + R T ++ +GLDW PL+ A G VQGNLDP+ L ++ +
Sbjct: 258 GVDTASLLPSMRE-TGADVLGLDWRTPLAEAWHRLDYGCAVQGNLDPITLFAEPDLIRNR 316
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V IL + P IFNLGHGI P ++V +VK VR K
Sbjct: 317 VENILAQAANRPGHIFNLGHGIVPGTPVEHVQAVVKFVREYK 358
>gi|94967724|ref|YP_589772.1| uroporphyrinogen decarboxylase [Candidatus Koribacter versatilis
Ellin345]
gi|172046734|sp|Q1ITV2|DCUP_ACIBL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|94549774|gb|ABF39698.1| uroporphyrinogen decarboxylase [Candidatus Koribacter versatilis
Ellin345]
Length = 351
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 115/349 (32%), Positives = 175/349 (50%), Gaps = 10/349 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + + P+W MRQAGRY+ EYR +R+K+ + +++C P+ E+T+
Sbjct: 1 MAAPNSLFVRACKRQPVERTPVWFMRQAGRYMSEYRAVREKY-SLVEICKKPDVAAEVTI 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLN 118
N DAAI+F+D+L+ + +G F EGP ++ PI I L + L
Sbjct: 60 TAAEALNVDAAIIFADLLLPLEVMGLPFHFSPGEGPVIEVPIRDAAHITRLRTDRAHDLG 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + +++ + + + +IGFCGAP+T+ASYMI GG +++ + + Y + A++
Sbjct: 120 Y---VAEAVKKVSDHFGSKLPVIGFCGAPFTLASYMIEGGGSRNYLEVKKLMYNSPHAWD 176
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL L V +EY Q+ AG DVIQIFD+ GCL ++ Y ++ A++
Sbjct: 177 ELLGKLVAVLSEYTADQVKAGADVIQIFDSWVGCLSVEDYRRYVLPRTTELVKALQHST- 235
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVG 297
I F + +L + R T + IGLDW VPL L + +QGNLDP+ L
Sbjct: 236 RVPIIYFGTDSATLLPSMRE-TGAEVIGLDWRVPLDQGWSLLEHSVAIQGNLDPVLLFAE 294
Query: 298 NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ IL G IFNLGHGI P +NV DL K V
Sbjct: 295 WPELKSRAERILKQADGRPGHIFNLGHGILPHTPVQNVKDLAKFVHEYS 343
>gi|284031652|ref|YP_003381583.1| uroporphyrinogen decarboxylase [Kribbella flavida DSM 17836]
gi|283810945|gb|ADB32784.1| uroporphyrinogen decarboxylase [Kribbella flavida DSM 17836]
Length = 364
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 177/349 (50%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G P+W MRQAGR LPEYR +R+ L+ C P+ VE+TLQP+
Sbjct: 21 SRSAFLLAARGEPGPHTPVWFMRQAGRSLPEYRALREGT-TMLESCMRPDLVVEITLQPV 79
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RRY DAAI FSDI++ A+G ++ GP + P+ T + +
Sbjct: 80 RRYGVDAAIFFSDIVLPLKAVGVDLEIQPGVGPVVAAPVRTAADLAAVRPV--TPADVAY 137
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ S+ L +L LIGF GAP+TVASY++ GG KDH + + + + + ++ L D
Sbjct: 138 VTDSVRQLVGELGG-TPLIGFAGAPFTVASYLVEGGPSKDHAKTKSLMHADPKLWHALAD 196
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+DV+ YL QI AG IQ+FD+ AG L ++ + ++ A+ +
Sbjct: 197 RLADVAIAYLSVQIEAGASAIQLFDSWAGALSPRDYAEFVQPHSAKVFGALEQY--GVPR 254
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-----QKEGPVQGNLDPMRLVVG 297
+ F G +L ++ +G+DW VPL A+ PVQGNLDP L G
Sbjct: 255 LHFGVNTGELLGLMSE-AGADVVGVDWRVPLDEAVRRITAAGGSPKPVQGNLDPALLFAG 313
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + ++ IL S P IFNLGHG+ P DP+ + +V+ V ++
Sbjct: 314 WEAIEPQLDRILTEGRSAPGHIFNLGHGVPPNADPEVLHKIVQAVHAKS 362
>gi|307325180|ref|ZP_07604384.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
gi|306889326|gb|EFN20308.1| uroporphyrinogen decarboxylase [Streptomyces violaceusniger Tu
4113]
Length = 368
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 109/341 (31%), Positives = 171/341 (50%), Gaps = 10/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ + ++ P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQP+RR+
Sbjct: 26 FMRACRREPVSHTPVWFMRQAGRSLPEYRKLREGTA-MLESCMRPDLVTEITLQPVRRHR 84
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAA+ FSDI+V A+G ++ GP ++ PI T+ +D + + + ++
Sbjct: 85 VDAAVYFSDIVVPLKAIGIDLDIKPGVGPVVERPIRTRADLERLRPLD--PDDVKYVTEA 142
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I L +L LIGF GAP+T+ASY+I GG ++H + Y + + LLD L+D
Sbjct: 143 IGALVGEL-GATPLIGFAGAPFTLASYLIEGGPSRNHEHTKALMYGDPALWAALLDRLAD 201
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++A +L QI AG +Q+FD+ G L ++ + ++ AV I F
Sbjct: 202 ITAAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVLPASKKVFDAVAGY--GVPRIHFG 259
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G + ++ +G+DW VPL A + +QGNLDP L +
Sbjct: 260 VGTGEL-LGLLGEAGADVVGVDWRVPLNEAARRVGPGKALQGNLDPAVLFAPRTAVEAKA 318
Query: 306 NAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L+ IFNLGHG+ P DP + LV+ V +
Sbjct: 319 EEVLEAARGLEGHIFNLGHGVLPSTDPDALTRLVEYVHTRS 359
>gi|218188685|gb|EEC71112.1| hypothetical protein OsI_02909 [Oryza sativa Indica Group]
Length = 402
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 107/345 (31%), Positives = 179/345 (51%), Gaps = 6/345 (1%)
Query: 2 NERKQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ + ++ +G + PP W+MRQAGRY+ EY+ + K+ +F + T + VE+TL
Sbjct: 42 STEEPLLVRAARGEDGLPRPPAWMMRQAGRYMAEYQALAKRHPSFRERSETTDLIVEITL 101
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP R + D ILFSDIL A+G +++GP + P+ ++E ID
Sbjct: 102 QPWRAFAPDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSEEQVRELTPID--FEK 159
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + +
Sbjct: 160 LRFVGESLKILRTEIDGQAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPNVLRG 219
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL L+D +EY+I Q+++G IQIFD+ G L H +E ++ + +I++ ++ + PN
Sbjct: 220 LLSHLADAISEYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVNKIKIECPN 279
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGN 298
+ + G G +L+ T + IGLDW+V ++ L + VQGN+DP L
Sbjct: 280 VPLVLYINGNGGLLERMTD-TGVDVIGLDWTVDMADGRRRLGNKISVQGNVDPAFLFSPL 338
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ D ++ ++ G I NLGHG+ + + V RS
Sbjct: 339 PVLTDEIHRVVKSAGPKGHILNLGHGVLVKTPEEAVAHFFDVTRS 383
>gi|258512054|ref|YP_003185488.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478780|gb|ACV59099.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 359
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 172/343 (50%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + ++ P+W MRQAGRY PEYRQIR+ + LD+C PE +T P+
Sbjct: 9 NNRFLRACRREPVDRVPVWFMRQAGRYDPEYRQIRETY-TLLDICREPELCARVTRMPVD 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILFSDI+V A+G + EN GP M+ P+ T E D L +
Sbjct: 68 KLGVDAAILFSDIMVPVGAMGMSFSLQENVGPVMEQPLRTDEDVARLHAFDPE-EALPYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I L K LP + LIGF G P+T+ASYMI GG +D+ + + ++ L+D
Sbjct: 127 LETIRYLAKALP--VPLIGFAGGPFTLASYMIEGGPSRDYLRTKTMMLARPDLWHALMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS + YL AQI AG +QIFD+ G L H F + V R+++ + I
Sbjct: 185 LSQAMSRYLRAQIQAGASAVQIFDSWVGSLSVHTFRGHVKPYVQRMLTDLAPL--GVPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L + + +G+DW PL A + +QGNLDP+ L +
Sbjct: 243 YFGVHTGELLAEFAE-AGATVVGVDWRTPLDRARQRVGTSVALQGNLDPVSLFAPPDALR 301
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V +L + S +IFNLGHG+ P D + +V+ V +
Sbjct: 302 REVETVLRLGTESPGYIFNLGHGVKPTTDLAQLQRVVEWVHAF 344
>gi|111221536|ref|YP_712330.1| uroporphyrinogen decarboxylase [Frankia alni ACN14a]
gi|111149068|emb|CAJ60750.1| uroporphyrinogen decarboxylase (partial match) [Frankia alni
ACN14a]
Length = 452
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 113/340 (33%), Positives = 176/340 (51%), Gaps = 11/340 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
L + + P+W MRQAGR LPEYR +R LD C P E+T+QP+RR+
Sbjct: 120 PFLRACRRDQPETTPVWFMRQAGRVLPEYRALRADVP-MLDSCRDPAMITEITMQPVRRF 178
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI+V A+G ++ V GP + +P+ + L L + + + Q
Sbjct: 179 RPDAAIFFSDIVVPLVAIGLDIDIVAGVGPVVAEPVR--DSARLAALRALEPDDVPYVTQ 236
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ L +L LIGF GAP+T+ASY++ GG ++H + + Y ++ LLD L+
Sbjct: 237 AVRDLLGELGG-TPLIGFAGAPFTLASYLVEGGPSRNHLRTKAMMYGEPELWHELLDRLA 295
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++ +L Q+ AGVD +Q+FD+ AG L E ++ Y A R+++A + I F
Sbjct: 296 TITTAFLRVQVDAGVDAVQLFDSWAGALSEDDYRRYVAPHSARVLAAFAGE---VPRIHF 352
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L ++ ++ +G+DW VPL A + VQGNLDP + V+
Sbjct: 353 GVNTGELLAAMGQV-GADVVGVDWRVPLDEAARRIGPGRAVQGNLDPAAVFAPEPVLAAK 411
Query: 305 VNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L +FNLGHG+ P+ DP + +V V +
Sbjct: 412 VGDVLARGAKAEGHVFNLGHGVLPETDPGVLAHIVDLVHA 451
>gi|269839609|ref|YP_003324301.1| uroporphyrinogen decarboxylase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791339|gb|ACZ43479.1| uroporphyrinogen decarboxylase [Thermobaculum terrenum ATCC
BAA-798]
Length = 360
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 106/342 (30%), Positives = 168/342 (49%), Gaps = 8/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++L + + P+W MRQAGR L EYR++R+K+ + L + TPE ++TL P+
Sbjct: 14 EARMLAACRRQPTDSTPVWFMRQAGRCLAEYRELRRKY-DILTLAKTPELCAQVTLMPVD 72
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAA++F+DI++ +G GP + PI T+ ++ +
Sbjct: 73 ALGVDAAVMFADIMLPLGGMGVEFFIEPEIGPIIPHPIRTRADIEAIRIVEAE-EATPFV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F++I I+R++L LIGF G+P+T+A YMI G +D+ + Y ++ L+
Sbjct: 132 FEAIRIVRRELAGRAALIGFAGSPFTLACYMIEGRPSRDYAHAKRMMYGEPELWHGLMAK 191
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++V YL Q+ AG VIQ+FD+ G LG E+ Y RI S V+ I
Sbjct: 192 VTEVIVRYLRGQVQAGAQVIQLFDSWVGILGPDEYAEYVLPYSRRIFSEVKAL--GVPTI 249
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F GA +L+ + + +DW V L A E + + +QGNLDP ++ +
Sbjct: 250 HFGTGAASLLELMAE-AGPDLVSVDWRVRLDEAWERIGHDRGIQGNLDPAAMLAPWHYVE 308
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IL G +FNLGHG+ P DP + LV V
Sbjct: 309 KKALDILRRANGRPGHVFNLGHGVLPDTDPGKLRMLVDLVHE 350
>gi|158426341|ref|YP_001527633.1| uroporphyrinogen decarboxylase [Azorhizobium caulinodans ORS 571]
gi|158333230|dbj|BAF90715.1| uroporphyrinogen decarboxylase [Azorhizobium caulinodans ORS 571]
Length = 321
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 146/322 (45%), Positives = 199/322 (61%), Gaps = 6/322 (1%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R K +FL +CYTPE E+TLQPIRR+ FDAAI+FSDILV+ AL
Sbjct: 1 MRQAGRYLPEYREVRAKAGDFLTLCYTPELAAEVTLQPIRRFGFDAAIIFSDILVVPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +VRF EGPR+ P+T + + L +D + P++++I+ + +LP LIGF
Sbjct: 61 GVDVRFEAGEGPRLAPVTDKAGLDGLRRLLD--PARVQPVYEAITRVSSELPRETALIGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAPWTVA+YMI+G D R+ A ++ F L+D L D S +L AQI AG DV+
Sbjct: 119 CGAPWTVATYMIAGQGTDDQAPARLMALRDPDFFQELIDRLVDASIHHLRAQIEAGCDVV 178
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG-YMLKNYRRLTDS 262
QIFDT AG L H FE + R + RI+SAV+ + NA+ I+F +GA L+ L
Sbjct: 179 QIFDTWAGVLDPHSFERWCVRPLRRIVSAVKASHRNARIIAFPRGASLEGLEKIAALP-L 237
Query: 263 NAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
N I +DW++ A L + +QGNLDP+RL+ G + + + +I IFNL
Sbjct: 238 NGISVDWTIDREAARARLGDKVAIQGNLDPLRLIAGGPQLDEEILSIRKDFDGIRHIFNL 297
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHGI P+ +V LV+ VR
Sbjct: 298 GHGIKPETPIAHVEKLVEKVRE 319
>gi|315657942|ref|ZP_07910816.1| uroporphyrinogen decarboxylase [Staphylococcus lugdunensis M23590]
gi|315496978|gb|EFU85299.1| uroporphyrinogen decarboxylase [Staphylococcus lugdunensis M23590]
Length = 344
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 109/346 (31%), Positives = 190/346 (54%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL ++G P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MHNKNNAILNTIKGEKATHTPVWFMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAAIL+ DI+ +G +V GP + +PI + ID +
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIQSVNDVDKLTQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + Y++ +
Sbjct: 119 VPYVLDTIKLLTQE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYTFTKAMMYRDEATWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L +S +Y++AQ+ AG ++IQIFD+ G L +++ Y ++ ++IS ++ K+ +
Sbjct: 178 LMNHLVSISIDYVVAQVEAGAELIQIFDSWVGALNVQDYKYYIKPAMQKLISGIKEKH-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA +++ + L + +GLDW + + A + +QGNLDP L+
Sbjct: 237 VPIILFGVGASHLIDEWNDLP-IDVLGLDWRISIIQAQSMGISKTLQGNLDPALLLAPWP 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + + ILD L G IFNLGHG+ P+V+P + + + V
Sbjct: 296 VIEERLKNILDQGLMYGKHIFNLGHGVFPEVNPDTLKRVSQFVHDY 341
>gi|145594079|ref|YP_001158376.1| uroporphyrinogen decarboxylase [Salinispora tropica CNB-440]
gi|189083019|sp|A4X548|DCUP_SALTO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145303416|gb|ABP53998.1| uroporphyrinogen decarboxylase [Salinispora tropica CNB-440]
Length = 371
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 115/342 (33%), Positives = 172/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + P+W MRQAGR LPEYR+IR L+ C PE E+TLQP+R
Sbjct: 28 DSPFVRACRRKPGPHTPVWFMRQAGRSLPEYRKIRASVA-MLESCRRPELITEITLQPVR 86
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V A G + V GP ++ P+TT I + +
Sbjct: 87 RHGVDAAILFSDIVVPVAAAGVALDIVPGTGPVVNDPVTTAADVDRIRPISR--EDVPYV 144
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +L +L LIGF GAP+T+ASY+I GG ++H + + Y + ++ L
Sbjct: 145 DEAVRMLVGEL-GATPLIGFAGAPFTLASYLIEGGPSRNHTKTKALMYGDPDLWHALASR 203
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++V+ +L QI AGV +Q+FD+ AG L E ++ Y +++ + I
Sbjct: 204 LAEVTLAFLKVQIDAGVSAVQLFDSWAGALSEADYRRYVQPHSQAVLAGLADA--GVPRI 261
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW PL A + E VQGNLDP L V+
Sbjct: 262 HFGVGTGELLAAMGE-AGADVVGVDWRTPLDVATRRVGSERAVQGNLDPCLLFAPWPVIE 320
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L + P IFNLGHG+ P+ DP + +V +
Sbjct: 321 AEVRRVLAQGRAAPGHIFNLGHGVLPETDPDVLTRVVALIHE 362
>gi|302541896|ref|ZP_07294238.1| uroporphyrinogen decarboxylase [Streptomyces hygroscopicus ATCC
53653]
gi|302459514|gb|EFL22607.1| uroporphyrinogen decarboxylase [Streptomyces himastatinicus ATCC
53653]
Length = 361
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 172/343 (50%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + + P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQP+R
Sbjct: 23 DSAFLRACRREPVPHTPVWFMRQAGRSLPEYRKVREGTA-MLESCMRPDLVTEITLQPVR 81
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V A+G ++ GP ++ PI ++ +D + + +
Sbjct: 82 RHRVDAAIYFSDIVVPLKAIGVDLDIKPGVGPVVERPIRSRADLERLRPLD--PDDVKYV 139
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L +L LIGF GAP+T+ASY++ GG ++H + Y + + LLD
Sbjct: 140 TEAVGSLVGEL-GATPLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPELWADLLDR 198
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++A +L QI AG +Q+FD+ G L ++ + ++ AV I
Sbjct: 199 LADITATFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASTKVFEAVAGY--GVPRI 256
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G DW VPL A + +QGNLDP L + +
Sbjct: 257 HFGVGTGELLGL-LGEAGADVVGADWRVPLDEAARRVGPGKAIQGNLDPAVLFAPTEAVE 315
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+LD G IFNLGHG+ P DP + LV+ V +
Sbjct: 316 AKAAEVLDAAQGLEGHIFNLGHGVLPTTDPDALTRLVEYVHTH 358
>gi|254295490|ref|YP_003061513.1| uroporphyrinogen decarboxylase [Hirschia baltica ATCC 49814]
gi|254044021|gb|ACT60816.1| uroporphyrinogen decarboxylase [Hirschia baltica ATCC 49814]
Length = 344
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 149/345 (43%), Positives = 209/345 (60%), Gaps = 2/345 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + ++K+LE L G + PP+W+MRQAGR+LPEY ++R + K+FLD CY+P E TL
Sbjct: 1 MAQPEKKLLETLNGKIYEHPPVWMMRQAGRHLPEYLELRGRAKDFLDFCYSPSLATEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRYN D AILF+DIL+I DA+GRNVRFV+ EGP++DP ++ P ++ L+ +
Sbjct: 61 QPIRRYNMDGAILFADILLILDAMGRNVRFVKGEGPQLDPASSAADLDKFP-LEKLLDRM 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++S ++ +L TLIGF GAPWTVA Y I G D R+ AYQ+ + +
Sbjct: 120 SPVYETVSRVKSQLAPETTLIGFAGAPWTVAVYAIEGKGGTDKSAARLKAYQDPEDLDAI 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L + +A YL AQ AG D + +FD+ A L E + + ++I VR
Sbjct: 180 LDILVETTAHYLKAQADAGADALMVFDSWAEGLAEDSMDRLVIKPTQKLIQRVRDLGVTQ 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F +G+G ML+ Y + T +GLD ++P+ + E L K PVQGNLDP+RL+ G
Sbjct: 240 PIIGFPRGSGAMLEPYAKHTGVTGVGLDTALPVKWVHEALPKSMPVQGNLDPLRLISGGD 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
M + I P IFNLGHG+TPQ NV VK +R E
Sbjct: 300 AMDARIREIKSAFKDRPHIFNLGHGVTPQTPISNVERAVKVIREE 344
>gi|296270235|ref|YP_003652867.1| uroporphyrinogen decarboxylase [Thermobispora bispora DSM 43833]
gi|296093022|gb|ADG88974.1| uroporphyrinogen decarboxylase [Thermobispora bispora DSM 43833]
Length = 345
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 111/340 (32%), Positives = 174/340 (51%), Gaps = 12/340 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ + + P+W MRQAGR LPEYR++R+ L C TP+ VE+TLQP+RRY
Sbjct: 10 FIRACRRQPVPYTPVWFMRQAGRSLPEYRRVREGVG-MLRACATPDLVVEITLQPLRRYA 68
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI+V A+G ++ GP + PI + I L P L + + + +
Sbjct: 69 VDAAIFFSDIMVPLKAIGVDLDIQPAIGPVVSSPIRDRAGIAALRP---LEPDDVPYVTE 125
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++S+L K+L + LIGF G P+T+ASY+I GG K+H + + Y ++ L+D L+
Sbjct: 126 AVSLLVKEL-DRTPLIGFAGGPFTLASYLIEGGPSKNHDRTKAMMYGAPELWHELMDRLA 184
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++ +L Q+ AG +Q+FD+ G + +++ Y RI + I F
Sbjct: 185 GITLAFLRLQVTAGASAVQLFDSWVGAVAPQDYQKYVLPYTKRIFDGLADL--GVPRIHF 242
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L ++ +G+DW VPL A + +QGNLDP L+ +V+ +
Sbjct: 243 GVDTGELLGLMGE-AGADVVGVDWRVPLDDAALRVGAGKALQGNLDPAVLLAPWEVVAER 301
Query: 305 VNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+L + +FNLGHG+ P DP + L V
Sbjct: 302 AADVLRRGRVAEGHVFNLGHGVLPATDPDQLKRLADFVHE 341
>gi|282891112|ref|ZP_06299617.1| hypothetical protein pah_c045o148 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499105|gb|EFB41419.1| hypothetical protein pah_c045o148 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 339
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 129/341 (37%), Positives = 197/341 (57%), Gaps = 10/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L+ L PP+WLMRQAGRY+P+YR +R+K+ +FLDMC+ PE E+TL PI+ +
Sbjct: 6 FLDALNCKNQARPPVWLMRQAGRYMPQYRAMREKY-SFLDMCHQPELATEVTLMPIQTFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDILVI +AL +RF E +GP ++ P+ T E PN+ L + ++
Sbjct: 65 MDAAILFSDILVIPEALRVGLRFEETKGPIIERPLNTLEDIQNLPNVH-IPEALSYVSEA 123
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I + L + LIGFCGAP+T+ASY+I GG K + + + + +F+ LL+ L+D
Sbjct: 124 IKTMLPHL--KVPLIGFCGAPFTLASYLIEGGSSKTLKKTKQWMLREPASFHQLLNRLAD 181
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++ +YL QI +GV +QIFD+ A LG +F+ ++ + +I+ A+ N I F
Sbjct: 182 LTVDYLKLQIESGVKALQIFDSWAHVLGHFQFQEFSLGYLKKIVDALAST--NIPIILFC 239
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMIDGV 305
+G+ + L + AI LDW+ L ++ + +QGNLDP L N + V
Sbjct: 240 RGSSVFAPSLASLRPA-AISLDWNSDLKAVRQMLPSKIALQGNLDPDILYAPNPTIRQHV 298
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +L + P +IFNLGHGI P + V LV V++++
Sbjct: 299 SQMLKDMHQDPGYIFNLGHGIHPDTPMEAVHTLVDCVQNDR 339
>gi|224117002|ref|XP_002331805.1| predicted protein [Populus trichocarpa]
gi|222874501|gb|EEF11632.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 7/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ +G ++ PP W+MRQAGRY+ YR++ +K+ +F + T + VE++LQP
Sbjct: 1 SDPLLVKAAKGEPVSRPPAWMMRQAGRYMAVYRKLAEKYPSFRERSETTDLIVEISLQPW 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLL 121
++ D I+FSDIL A G E GP + PI ++E + L+P + L L
Sbjct: 61 EAFHPDGVIIFSDILTPLPAFGVPFDIEEVRGPVIQSPIRSEEGLKALHP---IELEKLQ 117
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ S+ ILR ++ ++GF GAPWT+A+Y++ GG + + + + + LL
Sbjct: 118 FLGDSLRILRNEVEGRAAVLGFVGAPWTIATYIVEGGTTRTYTNIKSMCHTAPQVLRALL 177
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L+ ++Y++ Q+ +G IQIFD+ G L ++ ++ + I+S VR K P
Sbjct: 178 SHLTKAISDYIVFQVESGAHCIQIFDSWGGQLPPDMWDRWSKPYIEEIVSTVRNKCPETP 237
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
+ + G G +L+ + T + IGLDW+V L+ L VQGN+DP L
Sbjct: 238 LVLYINGNGGLLERM-KGTGVDVIGLDWTVDLADGRKRLGSGISVQGNVDPAYLFSPLPA 296
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D + ++ G I NLGHG+ + V + RS
Sbjct: 297 LTDEIQRVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARS 339
>gi|297156495|gb|ADI06207.1| uroporphyrinogen decarboxylase [Streptomyces bingchenggensis BCW-1]
Length = 361
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 112/339 (33%), Positives = 176/339 (51%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L + ++ P+W MRQAGR LPEY ++R+ LD C P+ E+TLQP+RR++
Sbjct: 26 FLRACRREPVSHTPVWFMRQAGRSLPEYHKVREGIA-MLDSCTRPDLITEITLQPVRRHH 84
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAA+ FSDI+V A+G ++ GP + DPI T+ L+ L + + + ++
Sbjct: 85 VDAAVYFSDIVVPLKAIGLDLDIKPGVGPVIADPIRTRAD--LDRLRPLDPDDVKYVTEA 142
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY+I GG ++H + + Y + + LLD L+D
Sbjct: 143 VGMLTGEL-GATPLIGFAGAPFTLASYLIEGGPSRNHERTKALMYGDPELWAELLDRLAD 201
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++A +L QI AG +Q+FD+ G L ++ + ++ AV I +
Sbjct: 202 IAAAFLKVQIEAGASAVQLFDSWVGALSPADYRARVMPASTKVFDAVAGY--GVPRIHYG 259
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G + ++ +G+DW VPL A + +QGNLDP L Q +
Sbjct: 260 VGTGEL-LGLLGEAGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFAPRQAVEAKT 318
Query: 306 NAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +LD IFNLGHG+ P DP + LV+ V +
Sbjct: 319 DEVLDAARGLEGHIFNLGHGVLPSTDPDALTRLVEYVHT 357
>gi|288917123|ref|ZP_06411493.1| uroporphyrinogen decarboxylase [Frankia sp. EUN1f]
gi|288351492|gb|EFC85699.1| uroporphyrinogen decarboxylase [Frankia sp. EUN1f]
Length = 360
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 114/342 (33%), Positives = 175/342 (51%), Gaps = 10/342 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L G+ + P+W MRQAGR LPEYR +R LD C P+ E+TLQPIRR
Sbjct: 26 SPFLRAAAGDRPDRVPVWFMRQAGRVLPEYRALRANTA-MLDSCRNPDLVTEITLQPIRR 84
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAI FSDI++ A+G +V V GP + PI + + ++ + + +
Sbjct: 85 FRPDAAIFFSDIVLPLAAVGVDVDIVAGVGPVVAHPIRARADLDILRPLE--PDDVPYVQ 142
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ L ++L LIGF GAP+T+ASY+I GG + H + + Y ++ LL L
Sbjct: 143 TAVGSLIREL-GTTPLIGFAGAPFTLASYLIEGGPSRSHIKTKALMYSEPELWHDLLGRL 201
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D++A +L Q+ AG D +Q+FD+ AG L E ++ Y A R+++A I
Sbjct: 202 ADITAAFLRVQVDAGADAVQLFDSWAGALSEDDYRRYVAPHSSRVLAAFAD--DGIPRIH 259
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F G +L + ++ +G+DW VPL A + VQGNLDP + ++ +
Sbjct: 260 FGVNTGQLLGAMGEV-GADVVGVDWRVPLDEAVKRIGPGRSVQGNLDPAAVFAPGDLLAE 318
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V + + IFNLGHG+ P+ DP + +V V
Sbjct: 319 KVRDVCHRGAAAPGHIFNLGHGVLPESDPGVLAHIVDLVHQF 360
>gi|326384417|ref|ZP_08206097.1| uroporphyrinogen decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196762|gb|EGD53956.1| uroporphyrinogen decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
Length = 342
Score = 381 bits (979), Expect = e-104, Method: Composition-based stats.
Identities = 118/346 (34%), Positives = 183/346 (52%), Gaps = 15/346 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ G P+W MRQAGR LPEYR+IR + L+ C+ PE E+T+QP+RR+
Sbjct: 2 PLIAAATGGSPARRPVWFMRQAGRSLPEYREIRAG-RGMLESCFDPELVAEITMQPVRRH 60
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ DAAILFSDI+V A G ++ V GP + PI T P +D + +
Sbjct: 61 DTDAAILFSDIVVPLRAAGIDLDIVGGTGPVIASPIRTAADVASIPRLD--PAAVGAVTS 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I + +LP+ +LIGF GAP+T+ASY+I GG + + + ++ L+ L+
Sbjct: 119 AIGSILAELPDEKSLIGFAGAPFTLASYLIEGGPSRTYEHTKAMMLAEPELWHTLMGRLT 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ +L AQ+ AGVD +Q+FD+ AG L + +E Y A R+++ V I F
Sbjct: 179 DITITFLRAQLDAGVDAMQLFDSWAGTLSKSAYEEYVAPHSTRVMAEVAEY--GVPRIHF 236
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQV-MID 303
G G +L + + ++ IG+DW +PL A + VQGNLDP L+ G+ +
Sbjct: 237 GVGTGELLSSMTDV-GADVIGVDWRIPLDEAAARVGHRVAVQGNLDPTVLLAGDDAVLER 295
Query: 304 GVNAILDV------LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I+ G+ IFNLGHG+ P D + V+ + S
Sbjct: 296 EIDRIVAAGRRAVDAGAPGHIFNLGHGVLPNTDAGVITRAVELIHS 341
>gi|301122853|ref|XP_002909153.1| uroporphyrinogen decarboxylase, putative [Phytophthora infestans
T30-4]
gi|262099915|gb|EEY57967.1| uroporphyrinogen decarboxylase, putative [Phytophthora infestans
T30-4]
Length = 409
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 10/349 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ L+G+ P+W MRQAGR+LPE+R++R +F MC PE VE++LQP+
Sbjct: 60 KNDLLIRALRGDRTERVPVWCMRQAGRHLPEFRELRDMGYDFFTMCGVPELAVEVSLQPL 119
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI---YLLNPNIDLFLNY 119
RRY+ DA I+FSDILVI A+G V V GP + DPI E LNPNI+ L Y
Sbjct: 120 RRYHMDAVIIFSDILVIPQAMGMEVTMVPKVGPVLPDPIRKPEDIDKLDLNPNIEEKLGY 179
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+L ++++ R+K+ + LIGF GAP T+ YM+ G + + F YQ+ A +
Sbjct: 180 ML---DALNLARQKINGEVPLIGFVGAPLTLMCYMVEGSGSRTKALLKTFLYQHPEASHK 236
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTH-AGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++DV +++AQ AG +Q+F+T A L + F + + +I V+ + P
Sbjct: 237 LLQGITDVCVNFMLAQQRAGAQALQVFETVGAEVLTQDHFYEFVFPYLVQIADRVKAEIP 296
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVG 297
+ + F KG Y + T + IGLDW ++ + +QGN+D +
Sbjct: 297 DTPIVCFCKGTQYAYEKLVA-TKYDCIGLDWQSDPVEVRQIARGRVSLQGNMDSSVIYAS 355
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ D V +L G+ ++ NLGHG P ++P +V +K V+ +
Sbjct: 356 TDIIYDEVKKMLKRFGTQKYVANLGHGCFPDMEPAHVDAFIKAVQQISL 404
>gi|296122534|ref|YP_003630312.1| uroporphyrinogen decarboxylase [Planctomyces limnophilus DSM 3776]
gi|296014874|gb|ADG68113.1| uroporphyrinogen decarboxylase [Planctomyces limnophilus DSM 3776]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 186/342 (54%), Gaps = 9/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + ++ + PIW+MRQAGRYLPEY +R K FL++C TP E+TL
Sbjct: 8 DSRFMRAVRREATDTTPIWIMRQAGRYLPEYMAVRSKV-TFLELCETPALAAEVTLTARE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILF+D+L + +G ++ + + EGP + +P+ E ++ L+ L +
Sbjct: 67 VLDVDAAILFADLLPMLRPMGIDLEYAKGEGPVIHNPLRAPEDLQRFRELE-DLSSLGFV 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ +I ++RK LP +I L+GF GAP+T+ASY++ GG +++ + + Y + ++ L+
Sbjct: 126 YDAIRLIRKDLPGNIPLLGFAGAPFTLASYVLEGGGSRNYLHTKRWMYNHPEEWHELMGR 185
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS YL+AQ AG +QIFD+ AGCL ++ + + +R P+ I
Sbjct: 186 LSRTIVRYLLAQAAAGCQAVQIFDSWAGCLSPSDYREFVLPHTK---AVIRELMPHVAVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVMI 302
+F G +L + + +G+DW + +L + +QGNLDP+ L ++
Sbjct: 243 NFMTGNPALL-AMQNEAGGSLLGIDWRHDIGDVWKLVGDSKGIQGNLDPLVLEADLPILK 301
Query: 303 DGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+AIL+ G +FNLGHG+ P+VDP+ V +LV+ V
Sbjct: 302 AKADAILEASRGHRGHVFNLGHGVYPEVDPEKVKELVRHVHE 343
>gi|251773102|gb|EES53656.1| uroporphyrinogen decarboxylase [Leptospirillum ferrodiazotrophum]
Length = 347
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 185/343 (53%), Gaps = 8/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L + ++ PPIW+MRQAGRY+PEY++IRKK +FL +C TPE + TL PI
Sbjct: 8 KNDLFLRACRRERLDRPPIWIMRQAGRYMPEYQEIRKKT-SFLGLCKTPELATQATLLPI 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDIL+ +A+G ++ F E++GP+ +P+ T D +
Sbjct: 67 DLLGLDAAILFSDILIPVEAMGLSLEFTEHKGPKFLNPVRTDADIERLAVPDARKD-TGF 125
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ ++ +L + L+GF GAP+T+A+YM+ G K+ + + + N R + L++
Sbjct: 126 VGDAVRLINTRLDGRVPLLGFSGAPFTLATYMVEGETSKEFTKVKRLIFSNPRGYRALME 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ +YL Q+ AG+ Q+FDT AG L + YA ++ A+ R
Sbjct: 186 KVTRTVIDYLEMQVEAGIHAYQLFDTWAGSLCAEHYREYALPYTREVVRALARH--GIPS 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVM 301
I + G +L + ++ + +DW +PL A+ + E VQGNLDP+ L+ + +
Sbjct: 244 ILYINGTAALL-DLMDQAGTDVLSIDWRLPLDKAIPRISPEKAVQGNLDPVVLLTTEEAL 302
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V +L +G P +IFNLGHGI P+ LV+ V++
Sbjct: 303 AGEVRRVLAGVGDRPGYIFNLGHGILPETPMAMARSLVRMVQN 345
>gi|56963303|ref|YP_175034.1| uroporphyrinogen decarboxylase [Bacillus clausii KSM-K16]
gi|56909546|dbj|BAD64073.1| uroporphyrinogen decarboxylase [Bacillus clausii KSM-K16]
Length = 350
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 110/349 (31%), Positives = 178/349 (51%), Gaps = 11/349 (3%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN + L+ +G P+W MRQAGR PEYR+I++ + D+ + PE +
Sbjct: 1 MNTKTFNDTFLKACKGEKHGHVPVWYMRQAGRSQPEYRKIKE-THSLFDITHDPELCAYV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
T P+ +YN DAAIL+ DI+ +G V GP + +PI ID
Sbjct: 60 TKLPVDQYNNDAAILYKDIMTPLPFIGVEVDIKSGIGPVIDNPIHGLSDVERLGEIDPEH 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + + +I +LR +L + LI F GAP+T+ASYMI GG +++ + + F + A+
Sbjct: 120 D-VKHVLDTIKLLRTQL--DVPLISFAGAPFTLASYMIEGGPSRNYHKTKAFMHAEPEAW 176
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+D L+ ++ +Y+ AQI AG IQ+FD+ G + +++ + RI++ V+ +
Sbjct: 177 QRLMDKLAKMTIDYIKAQIQAGAQAIQLFDSWIGAVSVADYKRLIKPVMVRILAEVQTE- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
I G ++L ++ + + IG+DW +S A L +QGN+DP L+
Sbjct: 236 -GVPLILHGVGTPHLLSEWKDMP-VDVIGIDWRTTVSEARRLGINKTLQGNMDPSLLLAP 293
Query: 298 NQVMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ AILD + S FIFNLG G+ P+V P+ + L V
Sbjct: 294 WPVIEAEAKAILDEGMESNRFIFNLGQGVFPEVKPETLRRLTAFVHEYS 342
>gi|320589113|gb|EFX01575.1| uroporphyrinogen decarboxylase [Grosmannia clavigera kw1407]
Length = 368
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 122/359 (33%), Positives = 184/359 (51%), Gaps = 20/359 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY + K ++F + C E LTLQPI
Sbjct: 9 QNDLLLRAARGEKVERPPIWVMRQAGRYLPEYH-VAKGGRDFFECCRDAEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
R+ DAAI+FSDILV+ ALG V ++ +GP DP Q LL +
Sbjct: 68 ERFAGLIDAAIIFSDILVVPQALGMTVEMIDKKGPHFPAPLADPDDPQVAPLLAKPVAAA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L ++ ++ R+KL + LIGFCGAPWT+ YM+ GG + ++ + Y +
Sbjct: 128 ADELEYVYAAVRRTREKLHGRVPLIGFCGAPWTLFCYMVEGGGTRLFAHSKRWIYAHPDT 187
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL L++V E+L Q+ AG ++Q+FD+ AG L F +A ++ I A+ R+
Sbjct: 188 SGQLLHKLAEVCVEHLARQVQAGAQLVQVFDSWAGELSPAAFRRFAQPALAHIADALPRR 247
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV--QGNL 289
I F KGA Y L +L + +GLDW + A+ + + PV QGN
Sbjct: 248 LQQLGLAPVPMIVFPKGAWYALDACCQL-GYDVVGLDWQHDPAEAVRTRADRPVVLQGNA 306
Query: 290 DPMRLVVGNQVMIDGVNAILDVL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
DP L + +++ V ++ +I NLGHGITP V P ++ ++ V +
Sbjct: 307 DPGVLYGTHDAIVEAVRDMVVGFDWANRHQGWIVNLGHGITPFVKPDDLKFFLEEVHRQ 365
>gi|297561774|ref|YP_003680748.1| uroporphyrinogen decarboxylase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846222|gb|ADH68242.1| uroporphyrinogen decarboxylase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 355
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 110/346 (31%), Positives = 169/346 (48%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ L + ++ P+W MRQAGR LPEYR++R L+ C P+ E+T+Q
Sbjct: 14 TLQDSPFLRACRRLPVSHTPVWFMRQAGRSLPEYRRVRADVP-MLEACARPDMITEITMQ 72
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RRY+ DAAI FSDI+V A+G ++ GP + DPI + + ++ +
Sbjct: 73 PVRRYDVDAAIFFSDIVVPLKAIGIDLDIKPGVGPVVADPIR--DATGVKRLREIEPGDV 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +++ L +L LIGF GAP+T+ASY+I GG K+H + Y ++ L
Sbjct: 131 PYITEAVGQLVGEL-GDKPLIGFAGAPFTLASYLIEGGPSKNHEHTKALMYGEPELWDEL 189
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ +S +L QI AG +Q+FD+ G L ++ I + +
Sbjct: 190 MRRLATISLGFLRTQIEAGASAVQLFDSWVGALSAEDYRASVLPYTSWIFGQLAQH--EV 247
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L ++ +G+DW VPL A +Q +QGNLDP L +
Sbjct: 248 PRIHFGVGTGELLSLLSE-AGADVVGVDWRVPLDKAVQRVQPGTALQGNLDPATLFAPWE 306
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ + IL + +FNLGHG+ P DP + L V E
Sbjct: 307 VVAERTRDILARGRAADGHVFNLGHGVLPSTDPDMLQRLTAFVHEE 352
>gi|297620484|ref|YP_003708621.1| uroporphyrinogen decarboxylase [Waddlia chondrophila WSU 86-1044]
gi|297375785|gb|ADI37615.1| uroporphyrinogen decarboxylase [Waddlia chondrophila WSU 86-1044]
Length = 345
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 124/344 (36%), Positives = 190/344 (55%), Gaps = 10/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+LE L + PP+W+MRQAGRY+P YR+IR+++ F++MC PE E+T+ PI
Sbjct: 2 NTLLLEALACENQSRPPVWMMRQAGRYMPSYRKIREQYA-FVEMCRNPEIAAEVTMLPIH 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILFSDIL+I DALG +RF E +GP ++ P+ + E + L +
Sbjct: 61 EFGMDAAILFSDILMIPDALGVGLRFEEGKGPIIEKPVKSCEDVAALKKP-VVEEALGFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +L +L + LIGFCGAP+TVASYMI GG +D Q + + Y++ +F+ LL
Sbjct: 120 ADAIRLLCNEL--SVPLIGFCGAPFTVASYMIEGGTSRDFKQTKQWMYRDPESFHALLAL 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++ + +Y+ Q+ AG IQIFD+ A LG +F+ ++ + I+ + + PN I
Sbjct: 178 IAEATIDYVDMQVAAGAQAIQIFDSWAHVLGFRQFKEFSLFYMNAILEGICK--PNPPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMI 302
+ +GA + + AI LDW+ L L +QGN DP L +
Sbjct: 236 IYCRGASVFAQELANI-YPQAISLDWNAHLPSLRNLIPSRIALQGNFDPDLLYAPFSTIE 294
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V +L + G +I NLGHGI P + P+ V V TV++
Sbjct: 295 EEVKRMLCEMDGDPGYIVNLGHGIKPDMSPEAVKAFVDTVKAYS 338
>gi|300772175|ref|ZP_07082045.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33861]
gi|300760478|gb|EFK57304.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33861]
Length = 345
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 113/350 (32%), Positives = 189/350 (54%), Gaps = 11/350 (3%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN+ + + G PP+W+MRQAGRY+PEY +I+ K+ FL+MC TPE ++
Sbjct: 1 MNKTLQNDLFIRAAFGQQTERPPVWMMRQAGRYMPEYWEIKNKY-TFLEMCKTPEIAADV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
T+ P+ + DAAILFSDILV +A+G ++ F + GPR +P+ E
Sbjct: 60 TMLPVDLLDIDAAILFSDILVTPEAMGGDLSFEQGVGPRFSNPVRNWEDAE--KLNAQSA 117
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ L + +I +++++L I LIGF GAP+T+ SY++ G +D + + +
Sbjct: 118 DRLQYVADAIKVIQERLNGSIPLIGFAGAPFTILSYLVEGKSSRDFKLTKTLLNNDPKLA 177
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+++L ++D++ +YL QI AGV+ +Q+FD+ A L +++ + +IIS + R+
Sbjct: 178 HYILQKITDLTVDYLNMQIAAGVNAVQLFDSWAMALTWNDYIEFGHAYTQQIISRINRE- 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVV 296
+ ISFA+G+ + I LDW+ L+ L KE VQGN DP+ L
Sbjct: 237 -SIPVISFARGSSVFYPIMSE-AKPDVISLDWNADILNVKNNLPKEIAVQGNFDPIILYA 294
Query: 297 GNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ ++ + + + G F+FNLGHGI P + +V V ++ +
Sbjct: 295 DKPVIRKKIHELFERMRGQDGFLFNLGHGIMPDMPFDHVKYTVDVIKEFR 344
>gi|225677443|ref|ZP_03788408.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590521|gb|EEH11783.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 338
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 136/345 (39%), Positives = 191/345 (55%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I +++ PIWLMRQAGR LPEYR+ K NF+++CY + ELT
Sbjct: 1 MESSKTTIARIIKRNEPGGRVPIWLMRQAGRSLPEYRKAVKNMNNFMEICYNTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R++ DAAI+FSDIL+IAD LG NV FV GP + P+ + +
Sbjct: 61 LQPVTRFDMDAAIIFSDILIIADVLGCNVNFVRGVGPIIKPVESPK---ELKGPQEIETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTVASY+I GG K + F
Sbjct: 118 TLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLNF---YPSCLKE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y RII A++ ++ +
Sbjct: 175 IIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A P+QGNLDP L
Sbjct: 235 FPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKANL-NIPLQGNLDPNLLAYNKT 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 294 EAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKSY 338
>gi|296533540|ref|ZP_06896111.1| uroporphyrinogen decarboxylase [Roseomonas cervicalis ATCC 49957]
gi|296266133|gb|EFH12187.1| uroporphyrinogen decarboxylase [Roseomonas cervicalis ATCC 49957]
Length = 347
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 127/347 (36%), Positives = 192/347 (55%), Gaps = 7/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L L G + PPP WLMRQAGRYLPEYR++R + +F+ +C P E+TL
Sbjct: 1 MENASKPLLRALSGEALWPPPFWLMRQAGRYLPEYRELRAQAGDFISLCTNPALAAEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNY 119
QP+RRY D AILFSDIL++ A+G+ +R+ E EGP +DPI E + L P
Sbjct: 61 QPLRRYGMDGAILFSDILMLPWAMGQGLRYAEGEGPLLDPIRDAEGLAALRP--QEMRAR 118
Query: 120 LLPIFQSISILRKKLPNHIT---LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ PI ++++ +R+ L LIGF G+P+TVA YM+ G + R A+ +
Sbjct: 119 IAPILETVARVREGLAQEAPKAALIGFAGSPFTVACYMVEGRGGGEFAHARRMAHADPAL 178
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
F L+ L D + +YL+AQ AG + + +FD+ +G L +F ++ I+ A+R+
Sbjct: 179 FGKLIRLLVDGTVDYLLAQAEAGAEALMLFDSWSGLLSPSQFRRWSIEPTNAIVRAIRKV 238
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLV 295
P+ I F + AG +L Y + T + +D + +A EG +QGNLDP +V
Sbjct: 239 RPDIPLIGFPRLAGPLLAEYAQRTGVGTVAMDTGMDPRWAAANVPEGITLQGNLDPQAVV 298
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G + +IL + PF+FNLGHGI P P++V L + +R
Sbjct: 299 AGGPSLEAEARSILAAMRGRPFVFNLGHGIVPPTPPEHVAALARIIR 345
>gi|312196138|ref|YP_004016199.1| uroporphyrinogen decarboxylase [Frankia sp. EuI1c]
gi|311227474|gb|ADP80329.1| uroporphyrinogen decarboxylase [Frankia sp. EuI1c]
Length = 390
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 110/342 (32%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L + + P+W MRQAGR LPEYR +R L+ C E+TLQP+R
Sbjct: 55 RAPLLRAARREPTDVAPVWFMRQAGRALPEYRALRAGVP-MLESCQDAALVTEITLQPVR 113
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI +SDI+V A+G V V GP + +PI + L + + + +
Sbjct: 114 RFGTDAAIFYSDIVVPLVAIGMGVDIVAGVGPVVAEPIK--DAAGLAALRSVEPDDVPYV 171
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +L +L LIGF GAP+T+ASY++ GG K H + + Y ++ LLD
Sbjct: 172 HDAVRLLLAEL-GDTPLIGFAGAPFTLASYLVEGGPSKTHAKTKRLMYTAPDLWHSLLDR 230
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+DV+ +L Q+ AG+D +Q+FD+ AG L E ++ Y A ++++A I
Sbjct: 231 LADVTIGFLRVQVDAGIDALQLFDSWAGALDEGDYRRYVAPHSAKVLAAFEDA--GVPRI 288
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L + ++ +G+DW + L A + +QGNLDP + V+
Sbjct: 289 HFGVNTGELLTAMGEV-GADVVGVDWRLGLDEAARRVGPGRALQGNLDPTAVFAPPDVLA 347
Query: 303 DGVNAI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V + L + IFNLGHG+ P+ DP + +V V
Sbjct: 348 EKVRDVLLRGSKAEGHIFNLGHGVIPETDPGVLAHIVDLVHG 389
>gi|269126005|ref|YP_003299375.1| uroporphyrinogen decarboxylase [Thermomonospora curvata DSM 43183]
gi|268310963|gb|ACY97337.1| uroporphyrinogen decarboxylase [Thermomonospora curvata DSM 43183]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 113/341 (33%), Positives = 169/341 (49%), Gaps = 10/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ + + P+W MRQAGR LPEY ++R+ L+ C PE VE+TLQP+RRY
Sbjct: 19 FVKACRRQAVPYTPVWFMRQAGRSLPEYLRVREGVP-MLEACARPELIVEITLQPLRRYA 77
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI FSDI+V A+G + GP + DPI + L + + + ++
Sbjct: 78 VDAAIFFSDIVVPLKAIGIELDIKPGVGPVVADPIRDRAGIAALRR--LTPDDVPYVTEA 135
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L +L LIGF G P+T+ASY+I GG K+H + + Y + L+ L+D
Sbjct: 136 VGELVGEL-GDTPLIGFAGGPFTLASYLIEGGPSKNHDRTKAMMYGAPELWAELMGRLAD 194
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++A++L QI AG IQ+FD+ G +G ++ RI A+ + I F
Sbjct: 195 ITADFLKVQIAAGASAIQLFDSWVGAVGPEDYRASVLPYTRRIFEAI--EPLGVPRIHFG 252
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L ++ +G+DW VPL A L + +QGNLDP L +V+
Sbjct: 253 VGTGELLGLMGE-AGADVVGVDWRVPLDEAVLRVGPGKALQGNLDPAVLFAPWEVIEQRA 311
Query: 306 NAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L + IFNLGHG+ P DP + L V
Sbjct: 312 RDVLQRGRTAEGHIFNLGHGVLPSTDPDRLARLADLVHQAS 352
>gi|119717896|ref|YP_924861.1| uroporphyrinogen decarboxylase [Nocardioides sp. JS614]
gi|167012316|sp|A1SMY9|DCUP_NOCSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119538557|gb|ABL83174.1| uroporphyrinogen decarboxylase [Nocardioides sp. JS614]
Length = 345
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 175/342 (51%), Gaps = 9/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + P+W MRQAGR LPEY +R+ L+ C P+ VE+TLQP+R
Sbjct: 9 DSAFLKAARGEPVPHTPVWYMRQAGRSLPEYLAVREGIG-MLESCMDPDLVVEITLQPVR 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAI FSDI++ A+G ++ GP + P+ T P DL ++ I
Sbjct: 68 RYGVDAAIFFSDIVLPLKAVGVDLDIKPGVGPVVAHPVRTLADVEAIP--DLTPEHVPFI 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L +L LIGF GAP+TVASY++ GG K+H + + + ++ LL
Sbjct: 126 TEAVRGLVGELGG-TPLIGFAGAPFTVASYLVEGGPSKEHARTKAMMFGAPDVWDALLRK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ +SA YL Q+ AG +Q+FD+ AG L ++ + R++ R I
Sbjct: 185 IAGISASYLEVQVAAGASAVQLFDSWAGALTPADYRAFVMPHSARVLE--RAGALGVPRI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F G +L ++ +G+DW PL+ A+ L + VQGNLDP + +VM
Sbjct: 243 HFGVGTANLLGLMGE-AGADVVGVDWRTPLAHAIALVGDRGVQGNLDPTLVFAPTEVMTA 301
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I++ + IFNLGHG+ P DP + L + V++
Sbjct: 302 RAAEIVEAGRAARGHIFNLGHGVIPSTDPDQLKRLTEFVQTY 343
>gi|242058073|ref|XP_002458182.1| hypothetical protein SORBIDRAFT_03g028330 [Sorghum bicolor]
gi|241930157|gb|EES03302.1| hypothetical protein SORBIDRAFT_03g028330 [Sorghum bicolor]
Length = 404
Score = 379 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 106/338 (31%), Positives = 177/338 (52%), Gaps = 6/338 (1%)
Query: 9 LEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+ +G + PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R +
Sbjct: 51 VRAARGEDGLPRPPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFA 110
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
D ILFSDIL A+G +++GP + P+ ++E IDL + L + +S
Sbjct: 111 PDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSEEQVRELVPIDLDM--LQFVGES 168
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL L+
Sbjct: 169 LKILRNEIDGKAALLGFVGAPWTIATYVVEGGMTNTYTNIKSMCHTAPDVLRSLLSHLAQ 228
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++Y+I Q+++G IQIFD+ G L H +E ++ + +I+S ++++ P+ + +
Sbjct: 229 AISDYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPHVPLVLYI 288
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L+ + T + IGLDW+V +S L VQGN+DP L V+ D +
Sbjct: 289 NGNGGLLERMKD-TGVDVIGLDWTVDMSDGRRRLGNGISVQGNVDPAFLFSPLPVLTDEI 347
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ G I NLGHG+ + + V RS
Sbjct: 348 HRVVKSAGPKGHILNLGHGVLQKTPEEAVAHFFDVTRS 385
>gi|311067501|ref|YP_003972424.1| uroporphyrinogen decarboxylase [Bacillus atrophaeus 1942]
gi|310868018|gb|ADP31493.1| uroporphyrinogen decarboxylase [Bacillus atrophaeus 1942]
Length = 351
Score = 379 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 176/343 (51%), Gaps = 8/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L+ +G + P+W MRQAGR PEYR +++K+ +++ + PE +T P+
Sbjct: 6 NETLLKAARGGKADHVPVWYMRQAGRSQPEYRALKEKYG-LVEITHQPELCAYVTRLPVE 64
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y DAAIL+ DI+ +G +V GP +D P+ + + ++ + +
Sbjct: 65 QYGVDAAILYKDIMTPLPYIGVDVEIKNGIGPVIDNPVRSLQDIEKLGVLEPE-QDVPYV 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L + ++ LIGF GAP+T+ASYMI GG K++ + + F Y A+N L++
Sbjct: 124 LETIRLLVNE-QLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNQLMNK 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+ Y AQI AG QIFD+ G L + ++ Y + RI + + + N I
Sbjct: 183 LADMIIVYAKAQIKAGAKAFQIFDSWVGALNQADYRTYIKPVMNRIFTELADQ--NVPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
GA ++ ++ L N +GLDW + + A VQGNLDP L+ V+
Sbjct: 241 MHGVGASHLASDWHDLP-LNVVGLDWRLGVDEARAQGITKTVQGNLDPSILLAPWDVIEK 299
Query: 304 GVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD + S FIFNLGHG+ P V P + L V
Sbjct: 300 KAKDILDQGMKSDSFIFNLGHGVFPDVSPDVLKKLTSFVHEYS 342
>gi|51245132|ref|YP_065016.1| uroporphyrinogen decarboxylase [Desulfotalea psychrophila LSv54]
gi|81692873|sp|Q6ANR5|DCUP_DESPS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|50876169|emb|CAG36009.1| probable uroporphyrinogen decarboxylase [Desulfotalea psychrophila
LSv54]
Length = 339
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 183/346 (52%), Gaps = 13/346 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ +G + PIW+MRQAGRYLP Y++IR K +FL++C P VE+TLQP+
Sbjct: 2 NDTFLKACRGEKTDYTPIWMMRQAGRYLPAYQKIRGKV-SFLELCKNPALCVEVTLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT--TQEIYLLNPNIDLFLNYLL 121
DAAILFSDIL++ +A+G + F E GP +PI T L+ P+ D +
Sbjct: 61 LLGMDAAILFSDILILMEAMGAKLEFNEGCGPVFPNPIKDQTALDALIIPDADDATGF-- 118
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I +LR +L + LIGF GAP+T A+Y+I GG K + + + F+ ++
Sbjct: 119 -VMETIRLLRGEL--QVPLIGFAGAPFTCATYLIEGGSSKVFWETKKMMFTQPELFHGIM 175
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ ++ + YL AQ AG +QIFD+ AG L +FE +A V RII+++++ +
Sbjct: 176 EKITQATILYLQAQARAGAQALQIFDSWAGVLAPCDFEVFALPYVRRIIASLQQF--DLP 233
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I FA +L+ + ++ +GLDW + + A + +QGN+DP L++ +
Sbjct: 234 IIYFANNGSTLLE-MSASSGASVLGLDWRINIGDAGKRVPGIALQGNIDPFALLLPKDKL 292
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ IL+ IFNLGHGI P+ V V
Sbjct: 293 RKRIGTILEDAKEVKGHIFNLGHGIHQFTPPEQARIAVDAVHELSC 338
>gi|242309284|ref|ZP_04808439.1| uroporphyrinogen decarboxylase [Helicobacter pullorum MIT 98-5489]
gi|239524325|gb|EEQ64191.1| uroporphyrinogen decarboxylase [Helicobacter pullorum MIT 98-5489]
Length = 339
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 124/339 (36%), Positives = 179/339 (52%), Gaps = 5/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G P+W MRQAGRYL EYR++R + +FL +C P+ E+TLQP+ +
Sbjct: 3 FVDACFGKKTPYTPVWFMRQAGRYLQEYREVRAQAGDFLSLCKNPKLASEVTLQPVDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G + F EGP+ + L + L ++ +I
Sbjct: 63 VDAAILFSDILVVPMEMGMELGFFAGEGPKFAK-RIETQNDLKGLREDSHKSLQYVYDTI 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S+ R+KL LIGFCGAPWT+A+YM+ G K + Q + Y N + LL+ ++
Sbjct: 122 SLTREKLHKDKALIGFCGAPWTLATYMVEGEGSKTYQQTKKILYSNPAFLHSLLELIAHN 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AGV+ + IFD+ A L E + + +I S ++ KYP+ I F K
Sbjct: 182 LENYLEEQIKAGVNAVMIFDSWAAALEEEAYLEFGFAYCKKIASKIKAKYPHIPVILFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + + G+DWS PL A E L K+ +QGNL+P R+ MI G
Sbjct: 242 GISGYLDRI--DGEFDVFGVDWSTPLRIAKEKLGKKYVLQGNLEPCRIY-DEDSMIKGAK 298
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD++ IFNLGHG+ P + +N + LVK +
Sbjct: 299 EILDLMQGERHIFNLGHGMLPDLPRENAIKLVKFIHDYS 337
>gi|262202196|ref|YP_003273404.1| uroporphyrinogen decarboxylase [Gordonia bronchialis DSM 43247]
gi|262085543|gb|ACY21511.1| uroporphyrinogen decarboxylase [Gordonia bronchialis DSM 43247]
Length = 354
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 116/344 (33%), Positives = 180/344 (52%), Gaps = 14/344 (4%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ G + P+W MRQAGR LPEYR IR + L+ C+ E E+T+QP+RR+
Sbjct: 15 PLIAAATGATPSRRPVWFMRQAGRSLPEYRAIRAEHG-MLESCFDAEMVCEITMQPVRRH 73
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ DAAILFSDI+V A G ++ V GP + +PI T+ P L + + +
Sbjct: 74 DVDAAILFSDIVVPLKAAGVDLDIVAGTGPVIAEPIRTEADVTRLPR--LAPEAVGAVAR 131
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++ +L LIGF GAP+T+ASY+I GG +++ + + + +N L+ L+
Sbjct: 132 AVELILAELGGDTALIGFAGAPFTLASYLIEGGPSRNYERTKAMMHGAPVVWNELMGRLA 191
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ +L Q+ AGVD IQ+FD+ AG L ++ + A R+++ V I F
Sbjct: 192 DITIAFLRVQLDAGVDAIQLFDSWAGMLSAADYARFVAPHSSRVLAEVAEY--GVPRIHF 249
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L ++ IG+DW VPL A + VQGNLDP L G+ V+
Sbjct: 250 GVGTGELLAPMAH-AGADVIGVDWRVPLDEAARRVGPGKAVQGNLDPTMLFAGDDVVDRE 308
Query: 305 VNAILDVL------GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ ++D G+ IFNLGHG+ P DP + V +
Sbjct: 309 IRRVVDDGDRAIAEGAVGHIFNLGHGVLPGTDPDVLTRAVDLIH 352
>gi|332186998|ref|ZP_08388739.1| uroporphyrinogen decarboxylase [Sphingomonas sp. S17]
gi|332013008|gb|EGI55072.1| uroporphyrinogen decarboxylase [Sphingomonas sp. S17]
Length = 322
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 129/324 (39%), Positives = 193/324 (59%), Gaps = 6/324 (1%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
WLMRQAGRYLPEYR++R + FL + P+ E+T+QPIRR+ FD AILFSDIL++
Sbjct: 2 WLMRQAGRYLPEYRELRAQKGGFLALATDPDAAAEVTVQPIRRFGFDGAILFSDILMVPW 61
Query: 83 ALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
ALG+++ F EGPR+ P + + L + L P++ +++ ++ +LP+ + +
Sbjct: 62 ALGQDLSFGAGEGPRLAPALVDHALNALQRAPE----RLDPVYATVARVKAQLPSQTSFL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWTVA+YM++G KD G+ R FAY + F +++ + +++ +YL Q+ GV+
Sbjct: 118 GFAGSPWTVATYMVAGQGSKDQGETRRFAYADPEGFGAIIEAIVEMTIDYLAGQVANGVE 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L +FE + I+ R + P I F KGAG L Y R T
Sbjct: 178 AVQLFDSWAGSLSPAQFERWVIAPNAAIVEGFRARCPGVPVIGFPKGAGGKLPAYARETG 237
Query: 262 SNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+A+GLD +V +A L K+ PVQGNLDP+ L+ G + + V+ IL + P IFN
Sbjct: 238 VDAVGLDETVDPVWADTHLPKDLPVQGNLDPLALIAGGEALDSAVDRILAAFTARPHIFN 297
Query: 321 LGHGITPQVDPKNVLDLVKTVRSE 344
LGHGI P +V L+ VR
Sbjct: 298 LGHGILPDTPIAHVEHLIARVRRH 321
>gi|85375428|ref|YP_459490.1| uroporphyrinogen decarboxylase [Erythrobacter litoralis HTCC2594]
gi|122543380|sp|Q2N6J8|DCUP_ERYLH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|84788511|gb|ABC64693.1| uroporphyrinogen decarboxylase [Erythrobacter litoralis HTCC2594]
Length = 341
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 132/339 (38%), Positives = 196/339 (57%), Gaps = 4/339 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L + P+WLMRQAGRYLPEYR++R + FL++ Y E E+TLQPIRR+
Sbjct: 5 LLDTLNRTRSDRVPLWLMRQAGRYLPEYRELRARKGGFLELVYDSEAAREVTLQPIRRFG 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FD AILFSDIL++ ALG+ + F+ EGP + P + + L I++++
Sbjct: 65 FDGAILFSDILIVPHALGQKLEFLAGEGPHLSP---RLADAELEALSTVPERLDAIYETV 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+R L TL+GF G+PWTVA+YM++G +D R AY + ++D + D+
Sbjct: 122 RQVRAALDPETTLLGFAGSPWTVATYMVAGEGSRDQQAARSMAYTDPGKLQAIVDAIIDL 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ EYL+ QI AG + +Q+FD+ AG L +FE + I+ ++ P+A I F K
Sbjct: 182 TVEYLVGQIDAGAEAVQLFDSWAGSLAPDQFERWVIAPNAAIVRRLKEARPDALVIGFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVN 306
GAG L Y T +AI LD ++ ++A + +G PVQGNLDP++++ G M++
Sbjct: 242 GAGAKLSAYAAGTGVDAIALDETIDPAWAHTVLPDGMPVQGNLDPLQILAGGDAMVERTK 301
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
AIL L P +FNLGHGI +V LV TVR+ +
Sbjct: 302 AILGALADRPHVFNLGHGIDKHTPIGHVERLVDTVRNWQ 340
>gi|32267372|ref|NP_861404.1| uroporphyrinogen decarboxylase [Helicobacter hepaticus ATCC 51449]
gi|45476865|sp|Q7VF06|DCUP_HELHP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|32263425|gb|AAP78470.1| uroporphyrinogen decarboxylase [Helicobacter hepaticus ATCC 51449]
Length = 340
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 120/340 (35%), Positives = 183/340 (53%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIWLMRQAGRYL EY+Q R K +FL +C E E+TLQP+ +
Sbjct: 3 FIDACFRKPTPYTPIWLMRQAGRYLSEYKQTRTKAGSFLSLCKNVELATEVTLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDILV+ +G + F+ EGP+ + + ++N + L ++ ++
Sbjct: 63 VDAAILFSDILVVPLEMGLPLEFLAGEGPKFNRTISNVSDVVN-LQEGAHKRLTYVYDTL 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S +R KLP LIGFCG+PWT+A+YMI G K + +++ Y+ LL+ LS+
Sbjct: 122 SSIRSKLPKEKALIGFCGSPWTLATYMIEGQGSKTYAKSKAMLYKEPYILKTLLETLSEE 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG + +QIFD+ A L + ++ + + I ++ KYP+ + F K
Sbjct: 182 LKLYLEGQIRAGANAVQIFDSWASALECEVYFEFSWKYMKDIAQYIKGKYPHIPVMLFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L + G+DW P++ A L + +QGNL+P RL + M G++
Sbjct: 242 GIAGYLDKI--DGCFDVFGVDWGTPMALAKSYLGTKYVLQGNLEPSRLY-DKESMERGID 298
Query: 307 AILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL ++G IFNLGHG+ P + +N + LV+ VR +
Sbjct: 299 EILKIMGKEKGHIFNLGHGMLPDLPRENAIALVQMVREKS 338
>gi|291287170|ref|YP_003503986.1| uroporphyrinogen decarboxylase [Denitrovibrio acetiphilus DSM
12809]
gi|290884330|gb|ADD68030.1| uroporphyrinogen decarboxylase [Denitrovibrio acetiphilus DSM
12809]
Length = 337
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 118/344 (34%), Positives = 179/344 (52%), Gaps = 15/344 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L + G PP+W MRQAGRY+ EYR IRKK +FL++C TP+ E+TLQPI
Sbjct: 4 NDLLLRTINGEKTERPPVWFMRQAGRYMEEYRAIRKKV-SFLELCKTPDLCTEVTLQPIE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ FD AILFSDIL+ + +G + F N P + +PI T +D + + +
Sbjct: 63 AFGFDNAILFSDILIPIEPMGIQLDF--NPAPVIANPIRTMADADKLRELDPEKD-VPFV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ L K L + LIGF GAP+T+A YM+ G K+ + + + + +++
Sbjct: 120 METVRKLVKAL--DVPLIGFSGAPFTLACYMVEGSGSKNFENIKTLIHTDPETYRIMMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ + +YL AQI G V+Q+FDT AG + +++E Y V I + ++ A I
Sbjct: 178 LTSSTLKYLQAQIDNGAHVVQMFDTWAGVVSPYDYEKYIFPYVEHIANNLK----GAPLI 233
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVM 301
FAK + +L + +G+DW L A E +G +QGN DP+ L + +
Sbjct: 234 YFAKDSFSFYDTIGKL-NCAGMGVDWKATLKDADERLSKGKFVLQGNFDPVLLFGSKEAI 292
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I+ IFNLGHGI P +NV LVK V+ E
Sbjct: 293 KETAEKIIAEGKDLKGHIFNLGHGILPPTPRENVEYLVKIVKGE 336
>gi|38233021|ref|NP_938788.1| uroporphyrinogen decarboxylase [Corynebacterium diphtheriae NCTC
13129]
gi|81698612|sp|Q6NJJ4|DCUP_CORDI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|38199280|emb|CAE48911.1| uroporphyrinogen decarboxylase [Corynebacterium diphtheriae]
Length = 344
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 125/353 (35%), Positives = 186/353 (52%), Gaps = 18/353 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M IL+ G + P+W MRQAGR LPEYR+IR+ + LD C+ P+ E+TL
Sbjct: 1 MVSMPNPILDAAAGVTPHRRPVWFMRQAGRSLPEYREIREGV-SMLDSCFRPDMLAEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
QP+RR++ DAAILFSDI+V A G V V GP MD P+ T++ P +D
Sbjct: 60 QPVRRHDVDAAILFSDIVVPLKAAGVRVEIVPGRGPVMDHPLLTRQDIENLPILDHD--- 116
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + + I I+R++L + TLIGF GAP+T+ASY++ GG K+H + + +Q+ +++
Sbjct: 117 VHEVAEGIGIIREELNDAQTLIGFAGAPFTLASYLVEGGPSKNHEKTKSLMHQDPESWHL 176
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ L ++L QI AGV +Q+FD+ AG L E ++ + I++ V +
Sbjct: 177 LMRRLVPTIVQFLRTQIDAGVQAMQLFDSWAGFLSERDYREFVLPYSMEILAQV----GD 232
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
I F G G +L S +G+DW VPL A + +QGNLDP L G
Sbjct: 233 VPRIHFGVGTGELLTAMSE-AGSEVVGVDWRVPLDVAAQRMVSPKVLQGNLDPAILFAGE 291
Query: 299 QVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
VM + I + + IFNLGHG+ P DP + V+ + +
Sbjct: 292 DVMRREIARICAEADRAIAAGHATGHIFNLGHGVLPNTDPDAITRAVEIIHTF 344
>gi|1750399|gb|AAB39261.1| HemE-like protein [Pseudomonas aeruginosa PAO1]
Length = 295
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 105/292 (35%), Positives = 163/292 (55%), Gaps = 5/292 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R K +F+ +C PE E+TLQP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRATRAKAGDFMSLCMNPELACEVTLQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + + L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLYFETGEGPRFRKVVSSLADIEALPVPDPEQDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD +++ Y N +A + LLD
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKSKAMLYDNPKAMHALLD 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+ YL QIHAG +QIFD+ G L ++ ++ + +I+ + R++
Sbjct: 185 KLAQSVTSYLNGQIHAGAQAVQIFDSWGGSLSAAAYQEFSLAYMRKIVDGLIREHDGRRV 244
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
I F KG G L++ + + A+GLDW+ + A + + +QGN+DP
Sbjct: 245 PVILFTKGGGLWLESMAEV-GAEALGLDWTCDIGSARARVGERVALQGNMDP 295
>gi|213964755|ref|ZP_03392955.1| uroporphyrinogen decarboxylase [Corynebacterium amycolatum SK46]
gi|213952948|gb|EEB64330.1| uroporphyrinogen decarboxylase [Corynebacterium amycolatum SK46]
Length = 369
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 125/370 (33%), Positives = 182/370 (49%), Gaps = 33/370 (8%)
Query: 1 MNERK----QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R+ IL+ G + P+W MRQAGR LPEYR++RK LD C+ PE
Sbjct: 5 MNNRRTLTDAPILDAAYGRTPSRRPVWFMRQAGRSLPEYREVRKDIG-MLDSCFRPELLA 63
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QP+RR++ DAAILFSDI+V A G N+ V GP MD P+ ++ P +
Sbjct: 64 EITMQPVRRHDVDAAILFSDIVVPLKAAGVNLDVVPGRGPVMDTPVRSEADIKALPEVTE 123
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L P+ + I ++ ++L + LIGF GAP+T+ASY+I GG + H + + + +
Sbjct: 124 --EQLAPVAEGIGLILQELTDTQALIGFAGAPFTLASYLIEGGPSRHHERTKALMHSDPE 181
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ ++ + +L AQI AGVD IQ+FD+ AG L E ++ + I AV
Sbjct: 182 LWDHLMQKITPMVIAFLRAQIGAGVDAIQLFDSWAGYLTERDYRRFVLPYSKEIFQAVAD 241
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL---------------Q 280
I F G G +L T +G+DW VPL A Q
Sbjct: 242 A--GIPRIHFGVGTGELLGAMAE-TGPEVMGVDWRVPLDVAANRIRATLSDVHRGADPAQ 298
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKN 333
+QGNLDP L G M + I + + IFNLGHG+ P D
Sbjct: 299 NSLALQGNLDPAILFAGEAAMTQEIQRICSEADRAIKRGDARGHIFNLGHGVLPNTDADA 358
Query: 334 VLDLVKTVRS 343
+ V+ + +
Sbjct: 359 ITRAVEIIHA 368
>gi|302525785|ref|ZP_07278127.1| uroporphyrinogen decarboxylase [Streptomyces sp. AA4]
gi|302434680|gb|EFL06496.1| uroporphyrinogen decarboxylase [Streptomyces sp. AA4]
Length = 357
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 117/339 (34%), Positives = 177/339 (52%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L +G P+W MRQAGR LPEYR +R+ LD C+ PE E+T+QP+RR
Sbjct: 25 FLAAARGERPAHVPVWFMRQAGRSLPEYRALREGVP-MLDACFDPEMLAEITMQPVRRLG 83
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI+V A G ++ V GP + P+ + P ++ + +
Sbjct: 84 VDAAILFSDIVVPLKAAGVDIDIVPGTGPVVASPVRDADAVRALPKLE--PEQVGKVADG 141
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L ++L LIGF GAP+T+ASY+I GG ++H + + ++ L L+D
Sbjct: 142 VRLLVERL-GETPLIGFAGAPFTLASYLIEGGPSRNHEHTKALMHSQPEVWHDLAARLAD 200
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
++A +L AQ+ AGVD +Q+FD+ AG L E ++ + R+++ I F
Sbjct: 201 LAATFLRAQLEAGVDAVQLFDSWAGALSERDYREFVLPHSSRVLAVAGEY--GVPRIHFG 258
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L R ++ +G+DW +PL A L VQGNLDP L V+ V
Sbjct: 259 VGTGELLGAMRE-AGADVVGVDWRIPLDVAVQRLGGNVSVQGNLDPALLYASWPVLEAEV 317
Query: 306 NAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
I++ + +FNLGHG+ P VDP+ + +V V S
Sbjct: 318 RRIVEEGRAARGHVFNLGHGVLPGVDPEVLKRVVDLVHS 356
>gi|225630691|ref|YP_002727482.1| uroporphyrinogen decarboxylase [Wolbachia sp. wRi]
gi|254767710|sp|C0R449|DCUP_WOLWR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|95113894|gb|ABF55493.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|225592672|gb|ACN95691.1| uroporphyrinogen decarboxylase [Wolbachia sp. wRi]
Length = 338
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 134/345 (38%), Positives = 192/345 (55%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I ++++ PIWLMRQAGR LPEYR+ + NF+++CY + ELT
Sbjct: 1 MESGKTTIAKIIKRNEPGGRVPIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ + +
Sbjct: 61 LQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVESPK---ELKGPQEIETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTVASY+I GG K + F
Sbjct: 118 TLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLNF---YPSCLKE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y RII A++ ++ +
Sbjct: 175 IIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A P+QGNLDP L
Sbjct: 235 FPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKANL-NIPLQGNLDPNLLAYNKT 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 294 EAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKSY 338
>gi|224476892|ref|YP_002634498.1| uroporphyrinogen decarboxylase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254767707|sp|B9DN00|DCUP_STACT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|222421499|emb|CAL28313.1| uroporphyrinogen decarboxylase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 345
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 108/346 (31%), Positives = 185/346 (53%), Gaps = 7/346 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ + IL++++G + P+W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MHSKNNTILKMIKGEEVTHTPVWFMRQAGRSQPEYRALKEKY-SLFEITHQPELCAYVTH 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
P+ Y DAAIL+ DI+ +G +V GP + + I T + ID +
Sbjct: 60 LPVDNYQTDAAILYKDIMTPLKPIGVDVEIKSGIGPVISNTIKTVQDVEKLGQIDPKRD- 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +L ++ ++ LIGF GAP+T+ASYMI GG K++ + +++ +
Sbjct: 119 VPYVLDTIKLLTEE-KLNVPLIGFVGAPFTLASYMIEGGPSKNYHFTKAMMFRDEATWFA 177
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L D+S Y AQI AG ++IQIFD+ G L +F Y S+ R+I ++ ++ +
Sbjct: 178 LMDHLVDMSITYASAQIEAGAELIQIFDSWIGALNAVDFNYYIKPSMERLIKGIKAQH-D 236
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F A ++++ + L + +G+DW + + +QGNLDP L+
Sbjct: 237 VPIILFGVNATHLIEEWNNLP-IDVLGIDWRTTIKETSDSGVAKTIQGNLDPSLLLAPWD 295
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ ++ ILD + G IFNLGHG+ P+V+P + + V
Sbjct: 296 VIQPRLDKILDEGMQHGKHIFNLGHGVFPEVNPDTLKQITAYVHDY 341
>gi|258543718|ref|YP_003189151.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01]
gi|256634796|dbj|BAI00772.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01]
gi|256637852|dbj|BAI03821.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-03]
gi|256640906|dbj|BAI06868.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-07]
gi|256643961|dbj|BAI09916.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-22]
gi|256647016|dbj|BAI12964.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-26]
gi|256650069|dbj|BAI16010.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-32]
gi|256653059|dbj|BAI18993.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656113|dbj|BAI22040.1| uroporphyrinogen decarboxylase [Acetobacter pasteurianus IFO
3283-12]
Length = 359
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 197/349 (56%), Gaps = 13/349 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L G + PPP+WLMRQAGR+LPE+R +R K +FL C TP+ ELTLQPI+R
Sbjct: 11 KRLLRTLNGEALWPPPMWLMRQAGRFLPEFRAMRAKA-DFLTRCMTPDIATELTLQPIKR 69
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ D AILFSDIL++ A+G+++ FVE +GP + I +++ + P+ +
Sbjct: 70 FGMDGAILFSDILILPWAMGQSLEFVEGKGPVLGAIRSEQDLA-KLDPARIAEVTAPVLE 128
Query: 126 SISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+++ LR +L P TL+GF GAP+TVA YM+ G ++ R AY
Sbjct: 129 TLTRLRTELNGPDKIGVAQPGATTLLGFTGAPFTVACYMVEGHGSREFAITRQMAYAEPV 188
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
F+ L+D L+ +AEYL QI AG + + +FD+ AG L EF + +I+ ++
Sbjct: 189 LFDRLMDLLTQTTAEYLCKQIEAGAEAVMLFDSWAGLLSPSEFRKHVIAPSRQIVQTIKA 248
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
++P+ + I F + +G ++ Y R TD + + LD + + + +QGNLDP+ +
Sbjct: 249 RHPSTRIIGFPRLSGVLVAEYARETDVDVVALDTGADIKIVRSMVPEHIGIQGNLDPVAV 308
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G + M AI + +FNLGHG+ PQ ++V +LV T+R
Sbjct: 309 LAGGEAMKREALAIREAGRGRAHVFNLGHGVLPQTPVEHVAELVSTIRE 357
>gi|255533327|ref|YP_003093699.1| uroporphyrinogen decarboxylase [Pedobacter heparinus DSM 2366]
gi|255346311|gb|ACU05637.1| uroporphyrinogen decarboxylase [Pedobacter heparinus DSM 2366]
Length = 340
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 118/344 (34%), Positives = 186/344 (54%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+
Sbjct: 2 NTLFLDAAFSKQTERPPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV +A+G ++ F + GP+ +P+ T + L+ L +
Sbjct: 61 LLGIDAAILFSDILVTGEAMGGDLSFTQGIGPKFANPVRTLKDVEALEV--DVLDRLQYV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +++++L I LIGF GAP+TV SY++ GG KD ++ + + LL
Sbjct: 119 ADAIKVIQQRLNGSIPLIGFAGAPFTVMSYLVEGGSSKDFKLTKLLMHNQPEVAHKLLAK 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ V+A+YL QI AGV+ IQIFD+ A L ++++ ++ R + II+ + RK + I
Sbjct: 179 IAKVTADYLNLQIAAGVNAIQIFDSWALALSWNDYQEFSHRYIQEIIANLNRK--DIPVI 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
SF KG+ + I +DW+ L G VQGNLDP L V+
Sbjct: 237 SFCKGSSVFAPIMAE-AKPDVISVDWNADLLNIKNSLPAGIAVQGNLDPHILYADKPVIK 295
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + G FIFNLGHGI P + NV ++ ++ K
Sbjct: 296 KEILRLFERMRGQNGFIFNLGHGIMPDIPFDNVKYAIEVIKEFK 339
>gi|330991369|ref|ZP_08315320.1| Uroporphyrinogen decarboxylase [Gluconacetobacter sp. SXCC-1]
gi|329761388|gb|EGG77881.1| Uroporphyrinogen decarboxylase [Gluconacetobacter sp. SXCC-1]
Length = 353
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 128/354 (36%), Positives = 200/354 (56%), Gaps = 13/354 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M E ++ +L L G PPP+WLMRQAGR+LPE+R +R+K +F+ C TP+ V++TL
Sbjct: 1 MTETRKPLLATLLGEATWPPPVWLMRQAGRFLPEFRALREKA-DFITRCMTPDMAVDITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ D AILFSDIL++ A+G+++ FV GP + P+ + + +
Sbjct: 60 QPIRRFGMDGAILFSDILILPWAMGQSLEFVHGRGPVLGPVRSMADLE-RLDPTRVAKAV 118
Query: 121 LPIFQSISILRKKL----------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P+ ++++ LRK + P +TLIGF GAP+TVA YM+ G ++ + R A
Sbjct: 119 QPVMETLARLRKTVDGPEAIGPARPGQVTLIGFAGAPFTVACYMVEGHGSREFEETRRLA 178
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + F+ L+D L+ +A+ L AQI AG + + +FD+ +G L +F + RI
Sbjct: 179 YTDPAFFDRLIDLLTTSTADMLCAQIEAGAEAVMLFDSWSGLLPPSQFRQHVIEPARRIT 238
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGNL 289
+ ++P I F + G M Y T NA+ LD ++ A ++ +QGNL
Sbjct: 239 EIINARHPGVPVIGFPRLGGLMAIEYGHKTGVNAMALDTGADMMAVAEKVPDTLVLQGNL 298
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
DP+R++ G + M AI D + P +FNLGHG+ P P++V DL++T+R
Sbjct: 299 DPIRVLAGGEGMRIEARAIRDAMKGRPHVFNLGHGVIPSTPPEHVGDLIRTIRE 352
>gi|190571243|ref|YP_001975601.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018641|ref|ZP_03334449.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|238058173|sp|B3CM33|DCUP_WOLPP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|190357515|emb|CAQ54951.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995592|gb|EEB56232.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 338
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 139/345 (40%), Positives = 198/345 (57%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVLQGNVI-NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I+ +++ N PIWLMRQAGR LPEYR+ +K NF+++CY+ + VELT
Sbjct: 1 MESNKPAIVRIIKQNKPNEKVPIWLMRQAGRSLPEYRKAVEKTSNFMEICYSIDLVVELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI+R++ DAAI+FSDIL+IAD LG +V FV GP + P+ + E N F
Sbjct: 61 LQPIKRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVKSSE---ELKNSQEFETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
PI +I +R +L +LIGF G PWTVASY+I GG K + F
Sbjct: 118 TFPILNAIRKVRSQLSEEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLHFCSLE---LEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ K+P+
Sbjct: 175 VIKKITEATIIYLIKQIEFGADVIQLFDSNAGILQGELFERYVIKPTKEIVSAIKNKFPD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A K P+QGNL+P L
Sbjct: 235 FPIIGFPRSAGNLYKDYYEKTGVSAVSIDYNVPIEWAKANLK-IPLQGNLNPSLLAYNKA 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+ I+D PFIFNLGHG+ P +N+ LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENIAALVDLVRNY 338
>gi|95113897|gb|ABF55495.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
Length = 338
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 134/345 (38%), Positives = 191/345 (55%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I ++++ PIWLMRQAGR LPEYR+ + NF+++CY + ELT
Sbjct: 1 MESGKTTIAKIIKRNEPGGRVPIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ + +
Sbjct: 61 LQPVTRFDMDAAIIFSDILIIADVLGCDVNFVCGVGPIIKPVESPK---ELKGPQEIETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTVASY+I GG K + F
Sbjct: 118 TLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSKTFSKVLNF---YPSCLKE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ +++V+ YLI QI G DVIQ+FD++AG L E F Y RII A++ ++ +
Sbjct: 175 IIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFREYVIEPTKRIILAIKDRFSD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A P+QGNLDP L
Sbjct: 235 FPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKANL-NIPLQGNLDPNLLAYNKT 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 294 EAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKSY 338
>gi|295394780|ref|ZP_06804995.1| uroporphyrinogen decarboxylase [Brevibacterium mcbrellneri ATCC
49030]
gi|294972376|gb|EFG48236.1| uroporphyrinogen decarboxylase [Brevibacterium mcbrellneri ATCC
49030]
Length = 348
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 119/342 (34%), Positives = 175/342 (51%), Gaps = 9/342 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ + P+W MRQAGR LPEY++ R+ LD C PE T E+TLQP+RR+
Sbjct: 3 TLTRAALSESVERTPVWFMRQAGRSLPEYKKAREGIA-MLDACLMPELTAEITLQPVRRH 61
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI+V G +V GP P+ T+E P DL + I Q
Sbjct: 62 GVDAAIFFSDIVVPLKIAGMDVEIQPGIGPVFAQPVRTREDLARIP--DLTADMCEAIAQ 119
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++++ R+ LP LIGF GAP+TVASY+I GG K+H + + + F+ +L L+
Sbjct: 120 AVTLTREGLPEDTALIGFAGAPFTVASYLIEGGPSKNHEKTKAMMLGDPELFSAILGKLA 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+SA ++ AQ+ AG Q+FD+ AG L ++E Y + A+ + N I F
Sbjct: 180 HMSATFIQAQLDAGAHAFQLFDSWAGYLNRADYERYVLPHSRTVFDALA--HNNVPSIHF 237
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L + S+ +G+D+ V L A +Q +QGNLDP + V+
Sbjct: 238 GVTTGELLGSMS-TAGSSVMGVDFRVDLDDASKRVQPGQALQGNLDPALVFAPWDVIASR 296
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I+ L G IFNLGHG+ P DP + +V+ V +
Sbjct: 297 IEDIVRAGLRHGGHIFNLGHGVLPTSDPTVLTRIVEEVHTVS 338
>gi|218288839|ref|ZP_03493090.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
LAA1]
gi|218240928|gb|EED08105.1| uroporphyrinogen decarboxylase [Alicyclobacillus acidocaldarius
LAA1]
Length = 359
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 117/343 (34%), Positives = 171/343 (49%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + ++ P+W MRQAGRY PEYRQIR+ + LD+C PE +T P+
Sbjct: 9 NDRFLRACRREPVDRVPVWFMRQAGRYDPEYRQIRETY-TLLDICREPELCARVTRMPVD 67
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAILFSDI+V A+G EN GP M+ P+ T E D L +
Sbjct: 68 KLGVDAAILFSDIMVPVGAMGMAFSLQENVGPVMEHPLRTDEDVARLHAFDPE-EALPYV 126
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I L LP + LIGF G P+T+ASYMI GG +D+ + + ++ L+D
Sbjct: 127 LETIRHLANTLP--VPLIGFAGGPFTLASYMIEGGPSRDYLRTKTMMLARPDLWHALMDK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS + YL AQI AG +QIFD+ G L H F + V R+++ + I
Sbjct: 185 LSQAMSRYLRAQIQAGASAVQIFDSWVGSLSVHGFRAHVKPHVQRMLADLTDLA--TPVI 242
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L + + +G+DW PL A + +QGNLDP+ L + +
Sbjct: 243 YFGVHTGELLAEFAD-AGATVVGVDWRTPLDRARQRVGASVALQGNLDPVSLFAPPEALR 301
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V +L + S +IFNLGHG+ P D + +V+ V +
Sbjct: 302 REVETVLRLGTQSPGYIFNLGHGVKPTTDLAQLQRVVEWVHAF 344
>gi|302414112|ref|XP_003004888.1| uroporphyrinogen decarboxylase [Verticillium albo-atrum VaMs.102]
gi|261355957|gb|EEY18385.1| uroporphyrinogen decarboxylase [Verticillium albo-atrum VaMs.102]
Length = 366
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 121/355 (34%), Positives = 185/355 (52%), Gaps = 18/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G V+ PP W+MRQAGRYLPEY + + +F C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGEVVERPPCWIMRQAGRYLPEYHEAK-GTNDFFACCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
R++ DAAI+FSDILVI ALG V V+ +GP P Q ++ ++
Sbjct: 68 DRFDGLLDAAIIFSDILVIPQALGMTVEMVDKKGPHFPSPLTGPEDPQYASVMAVDLPTA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+++ A
Sbjct: 128 AAELDYVYKAITMTRHKLAGRVPLIGFCGAPWTLLCYMVEGGGTKLFIQSKKWVYRHADA 187
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++D+ EYL Q+ AG + +FD+ AG LG EF +++ + I + + K
Sbjct: 188 ARALLQKIADLCVEYLALQVQAGAQAVMVFDSWAGELGPREFASFSEPYLAHIAAHLPAK 247
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNL 289
F KGA + L L +A+G+DW + A+ ++ + +QGN
Sbjct: 248 LRSLGLDPVPMTVFPKGAWHALGRACDL-GYDAVGIDWMQDPAEAVRIRGDRRVALQGNA 306
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L + M ++D +I NLGHGITP V+P ++ + V
Sbjct: 307 DPGVLYGTKEEMTRAAQVMVDGFWKEKKGWICNLGHGITPGVNPDDLKFFLSEVH 361
>gi|325102982|ref|YP_004272636.1| uroporphyrinogen decarboxylase [Pedobacter saltans DSM 12145]
gi|324971830|gb|ADY50814.1| uroporphyrinogen decarboxylase [Pedobacter saltans DSM 12145]
Length = 344
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 187/349 (53%), Gaps = 14/349 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+
Sbjct: 2 KNSLFIKAALSQETERPPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPV 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
DAAILFSDILV +A+G + F + GPR +P+ + L+ L
Sbjct: 61 DLLGIDAAILFSDILVTGEAMGGQLSFEQGVGPRFANPVQNLKDVEALEV--DVLDRLQY 118
Query: 123 IFQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ +I +++ +L I LIGF GAP+TV SY++ GG KD + ++F + A +
Sbjct: 119 VADAIRVIQSRLSKLGDQQIPLIGFAGAPFTVMSYLVEGGSSKDFKKTKLFMFNQPEAAH 178
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++DV+ +YL QI AGV+ +QIFD+ A L ++ ++ + + IIS + R
Sbjct: 179 KLLQKIADVTVDYLNMQIAAGVNAVQIFDSWALALSWDDYREFSHQYIQNIISRLNRT-- 236
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG 297
ISF KG+ + + +DW+ + +L + VQGNLDP L
Sbjct: 237 -VPVISFCKGSSVFAPIMAE-AKPDVVSVDWNADIRNIKSKLPQGIAVQGNLDPFVLYAD 294
Query: 298 NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ D + I++ + G FIFNLGHGI P + NV V+ ++ +
Sbjct: 295 KAVIKDRILRIIERMRGEKGFIFNLGHGIMPDIPFDNVKYAVEVIKEFR 343
>gi|42520838|ref|NP_966753.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|99035008|ref|ZP_01314807.1| hypothetical protein Wendoof_01000367 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|81700062|sp|Q73GC9|DCUP_WOLPM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|42410578|gb|AAS14687.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|95113891|gb|ABF55491.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|95113909|gb|ABF55503.1| HemE [Wolbachia endosymbiont of Drosophila melanogaster]
gi|95113912|gb|ABF55505.1| HemE [Wolbachia endosymbiont of Drosophila melanogaster]
Length = 338
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 133/345 (38%), Positives = 191/345 (55%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K I ++++ PIWLMRQAGR LPEYR+ + NF+++CY + ELT
Sbjct: 1 MESGKTTIAKIIKRNEPGGRVPIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+ + +
Sbjct: 61 LQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPVESPK---ELKGPQEIETK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTVASY+I G K + F
Sbjct: 118 TLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGRSSKTFSKVLNF---YPSCLKE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y RII A++ ++ +
Sbjct: 175 IIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSD 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + AG + K+Y T +A+ +D++VP+ +A P+QGNLDP L
Sbjct: 235 FPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKANL-NIPLQGNLDPNLLAYNKT 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I I+D PFIFNLGHG+ P +N+ LV V+S
Sbjct: 294 EAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLVKSY 338
>gi|326404939|ref|YP_004285021.1| uroporphyrinogen decarboxylase [Acidiphilium multivorum AIU301]
gi|325051801|dbj|BAJ82139.1| uroporphyrinogen decarboxylase [Acidiphilium multivorum AIU301]
Length = 358
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 136/341 (39%), Positives = 195/341 (57%), Gaps = 5/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G + PPP+WLMRQAGRYLPEYR++R+K NF+ +C TP E+TLQP+R
Sbjct: 7 EKPVLRVLGGEAVWPPPVWLMRQAGRYLPEYRKLREKAGNFIALCTTPPLATEVTLQPVR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL++ ALG+ +RF E EGPR++ I + L+P P+
Sbjct: 67 RFGMDAAILFSDILILPWALGQKLRFAEGEGPRLERIDGLAGLEALDPAA--LRQGTEPV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++S +R +LP TLIGF G+P+TVA YMI G D R AY + +++
Sbjct: 125 METVSRVRAELPPETTLIGFAGSPFTVACYMIDGRG-GDFPLTREVAYADPALLAAVIET 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + +YL QI AG D + +FD+ AG L F + RI+ +R ++P K I
Sbjct: 184 VTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLRVRHPGVKVI 243
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F + G M Y T +A+G+D SV + A + QGNLDP+ L G +
Sbjct: 244 GFPRLGGLMTLPYIADTGVDAVGMDTSVDPVALARLAPRRVAFQGNLDPLLLRAGGISLG 303
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I L P IFNLGHGI P P++V +++ +RS
Sbjct: 304 QAVERIARGLAGHPHIFNLGHGIVPDTPPEHVAAVIERLRS 344
>gi|326493868|dbj|BAJ85396.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499676|dbj|BAJ86149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 378 bits (970), Expect = e-103, Method: Composition-based stats.
Identities = 104/342 (30%), Positives = 178/342 (52%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G + PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP
Sbjct: 46 EPLLIRAARGEDGLPRPPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPW 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ D ILFSDIL A+G E++GP + P+ T+E ID L+ L
Sbjct: 106 HAFAPDGVILFSDILTPLPAIGVPFDISESKGPVIQSPVRTEEQVRELVPID--LDKLQF 163
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL
Sbjct: 164 VGESLKILRSEIDGKAALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLS 223
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ ++Y+I Q+++G IQIFD+ G L H +E ++ + +I++ ++ + P+
Sbjct: 224 HLAEAISDYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTECPHIPL 283
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
+ + G G +L+ + + + IGLDW+V ++ + VQGN+DP L V+
Sbjct: 284 VLYINGNGGLLERMKDI-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVL 342
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D ++ ++ G I NLGHG+ Q + V RS
Sbjct: 343 TDEIHRVVKSAGPKGHILNLGHGVLQQTPEEAVAHFFDVTRS 384
>gi|254821718|ref|ZP_05226719.1| uroporphyrinogen decarboxylase [Mycobacterium intracellulare ATCC
13950]
Length = 357
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 116/347 (33%), Positives = 179/347 (51%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L G P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+R
Sbjct: 17 ESLYLAAAGGRKPRRIPVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVR 75
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V G ++ V GP ++ P+ T ++ + PI
Sbjct: 76 RHDVDAAILFSDIVVPLLGAGIDLDIVAGVGPVIESPVRTAADVAAIKPLERH--RVQPI 133
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++S+L L + LIGF GAP+T+ASY+I GG + H + + + +++ L++
Sbjct: 134 SDAVSLLVSAL-GDVPLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEK 192
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L Q+ AGVD IQ+FD+ AG L + Y RI +A+
Sbjct: 193 LTDITVGFLRVQLDAGVDAIQVFDSWAGTLSLANYRAYVQPHSARIFAALAEY--GVPMT 250
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L + + +G+DW L A ++ +QGNLDP+ L+ G V+
Sbjct: 251 HFGVGTAELLGAMSEV-GATVVGVDWRTSLADAAARVEPGTALQGNLDPVVLLAGWPVVE 309
Query: 303 DGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A++D G+ +FNLGHG+ P+ DP + DLV V S
Sbjct: 310 RAARAVVDDGRRAVDAGAAGHVFNLGHGVLPETDPAVLTDLVSLVHS 356
>gi|260578849|ref|ZP_05846755.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium ATCC
43734]
gi|258602996|gb|EEW16267.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium ATCC
43734]
Length = 396
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 119/362 (32%), Positives = 181/362 (50%), Gaps = 29/362 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G + P+W+MRQAGR LPEYR+IRK + L+ C+ PE E+TLQP+
Sbjct: 39 KDAPFLAAARGETPSRRPVWMMRQAGRSLPEYREIRKDYG-MLESCFNPELLAEITLQPV 97
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAILFSDI+V A G ++ V GP ++ P+ T E P ++ + L
Sbjct: 98 RRHDADAAILFSDIVVPLKAAGVDLDIVAGRGPVVEHPVRTAEEAAALPIVE--SSQLDS 155
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I + I + + L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+
Sbjct: 156 IVEGIGGVLQGLRDDQVLIGFAGAPFTLASYLVEGGPSKNHEVTKALMYSQPDVWHALMR 215
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +L Q+ AGVD +Q+FD+ AG L ++ + +I A+R
Sbjct: 216 RLTPTIIRFLQVQVEAGVDALQLFDSWAGYLTARDYREFVRPYSTQIFDAMRAY--GIPM 273
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ---------------KEGPVQG 287
I F G G +L + L + +G+DW VPL A + +QG
Sbjct: 274 IHFGVGTGELLGDMA-LAGPDVVGVDWRVPLDSAATRVSAALQEADPAAEPTARAKALQG 332
Query: 288 NLDPMRLVVGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
NLDP L G +V+ + I ++ + IFNLGHG+ P DP + +
Sbjct: 333 NLDPAVLFAGPEVVETQIARICAEADRAIERGQARGHIFNLGHGVLPNTDPDAITRAFEE 392
Query: 341 VR 342
V
Sbjct: 393 VH 394
>gi|118363416|ref|XP_001014753.1| uroporphyrinogen decarboxylase family protein [Tetrahymena
thermophila]
gi|89296700|gb|EAR94688.1| uroporphyrinogen decarboxylase family protein [Tetrahymena
thermophila SB210]
Length = 398
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 112/342 (32%), Positives = 175/342 (51%), Gaps = 2/342 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L V++ I+ PIW+MRQAGRYLPE+R++R K +F ++C P E+TLQP+
Sbjct: 54 KNDTLLRVIKREKIDHLPIWVMRQAGRYLPEFREVR-KIWSFFELCDNPLLAAEVTLQPL 112
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DA I+FSDILV+ +G V E GP P E L L +
Sbjct: 113 ERFPMDAGIIFSDILVVPKVMGMEVIMEEKRGPVF-PQPLVEPSDLQKLSIPDPESLGDV 171
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++ + R+ + +T IGF GAPWT+ SYMI GG K + + + ++ LL
Sbjct: 172 YDALYLFRQAVEGKVTTIGFAGAPWTLMSYMIEGGGSKMFSKVKKWIFKWKEESKKLLSM 231
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+SDV EY+ QI G +IQ+FD+ AG LG ++ + R+ + V++++P I
Sbjct: 232 ISDVLIEYISKQIEGGAQIIQLFDSWAGELGHEDYWEFGLSYCVRVATEVKKRHPETPII 291
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
FAKG + D I W + L+ Q +QGNLDP L+ + +
Sbjct: 292 MFAKGNHSDMVFKHDCFDCVGIDYAWDLSLAAKYSQQYNKVIQGNLDPGVLLAEKDTIRE 351
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++D++G +I NLGHG+ P+ D +++ V
Sbjct: 352 KTRKMIDIVGVDRYIVNLGHGMWPEHDLEHLAVFVDETHKYS 393
>gi|331696708|ref|YP_004332947.1| uroporphyrinogen decarboxylase [Pseudonocardia dioxanivorans
CB1190]
gi|326951397|gb|AEA25094.1| Uroporphyrinogen decarboxylase [Pseudonocardia dioxanivorans
CB1190]
Length = 356
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 118/343 (34%), Positives = 166/343 (48%), Gaps = 10/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L +G P+W MRQAGR LPEYR +R + C PE T E+T+QP+
Sbjct: 18 RAAPFLVAARGGRPARLPVWFMRQAGRSLPEYRALRADTG-IIQACLDPELTCEITMQPV 76
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAILFSDI+V G V V GP + P+ T P L + P
Sbjct: 77 RRHGVDAAILFSDIVVPLYLSGVGVDIVAGTGPVVARPVRTAADVEALPR--LHPEQVAP 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I +L L LIGF GAP+T+ASY++ GG ++H + + ++ LL
Sbjct: 135 VVDAIRLLLPAL-GETPLIGFAGAPFTLASYLVEGGPSRNHERTKALMRSAPDVWHALLS 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +A +L AQ+ AGVD +Q+FD+ AG L E ++ Y ++ +
Sbjct: 194 RLAANAATFLQAQVDAGVDAVQLFDSWAGALSERDYRRYVMPHSAAVLEPLAGS--GIPR 251
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I F G G +L ++ IG+DW VPL A VQGNLDP L +
Sbjct: 252 IHFGVGTGELLGAMAD-AGADVIGVDWRVPLDEAVRRTGGRHAVQGNLDPAVLFADPVSI 310
Query: 302 IDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I + +FNLGHG+ P+ DP V +V V +
Sbjct: 311 EAEVRRIAAEGRAASGHVFNLGHGVLPETDPDVVTRVVDLVHT 353
>gi|149278616|ref|ZP_01884752.1| probable uroporphyrinogen decarboxylase [Pedobacter sp. BAL39]
gi|149230611|gb|EDM35994.1| probable uroporphyrinogen decarboxylase [Pedobacter sp. BAL39]
Length = 340
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 120/344 (34%), Positives = 194/344 (56%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ PP+W+MRQAGR++PEY +I+ K+ +FL+MC TPE ++T+ P+
Sbjct: 2 NTLFLDAAFSKQTERPPVWMMRQAGRFMPEYWEIKNKY-SFLEMCKTPEIAADVTMLPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDILV +A+G ++ F + GP+ +P+ T++ N N+D+ L+ L +
Sbjct: 61 LLGIDAAILFSDILVTGEAMGGDLSFTQGVGPKFANPVRTEKDVD-NLNVDV-LDKLQYV 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+I +++++L I LIGF GAP+TV SY++ GG KD ++ + + LL
Sbjct: 119 ADAIKVIQQRLNGSIPLIGFAGAPFTVMSYLVEGGSSKDFKLTKLLMHNQPEVAHRLLAK 178
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ V+A+YL QI AGV+ IQIFD+ A L ++++ ++ R + II+ + RK + I
Sbjct: 179 IAKVTADYLNLQIAAGVNAIQIFDSWALALSWNDYQEFSHRYIQEIIANLNRK--DIPVI 236
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
SF KG+ + + I +DW+ L + G VQGNLDP L V+
Sbjct: 237 SFCKGSSVFAPIMAE-ANPDVISVDWNADLLNIKKSLPAGIAVQGNLDPHILYADKPVIK 295
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + G FIFNLGHGI P + +V ++ ++ K
Sbjct: 296 KHILQLFERMRGENGFIFNLGHGIMPDIPFDHVKYAIEVIKDFK 339
>gi|95113900|gb|ABF55497.1| HemE [Wolbachia endosymbiont of Drosophila yakuba]
gi|95113903|gb|ABF55499.1| HemE [Wolbachia endosymbiont of Drosophila teissieri]
gi|95113906|gb|ABF55501.1| HemE [Wolbachia endosymbiont of Drosophila santomea]
Length = 338
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 130/332 (39%), Positives = 185/332 (55%), Gaps = 7/332 (2%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAI 72
+ PIWLMRQAGR LPEYR+ + NF+++CY + ELTLQP+ R++ DAAI
Sbjct: 14 RNEPGGRVPIWLMRQAGRSLPEYRKAVENMNNFMEICYNTDLVTELTLQPVTRFDMDAAI 73
Query: 73 LFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRK 132
+FSDIL+IAD LG +V FV GP + P+ + + LPI +I +R
Sbjct: 74 IFSDILIIADVLGCDVNFVRGVGPIIKPVESPK---ELKGPQEIETKTLPILNAIKKVRS 130
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+LP +LIGF G PWTVASY+I G K + F +++ +++V+ YL
Sbjct: 131 QLPKEKSLIGFAGGPWTVASYIIEGRSSKTFSKVLNF---YPSCLKEIIERITEVTIIYL 187
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
I QI G DVIQ+FD++AG L E F+ Y RII A++ ++ + I F + AG +
Sbjct: 188 IKQIEFGADVIQLFDSNAGALSEPLFKEYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNL 247
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
K+Y T +A+ +D++VP+ +A P+QGNLDP L I I+D
Sbjct: 248 YKDYCEQTGVSAVSIDYNVPIKWAKANL-NIPLQGNLDPNLLAYNKTEAIKEAKRIIDCF 306
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
PFIFNLGHG+ P +N+ LV V+S
Sbjct: 307 RDLPFIFNLGHGVLPDTPVENIAALVNLVKSY 338
>gi|326507992|dbj|BAJ86739.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 104/342 (30%), Positives = 178/342 (52%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G + PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP
Sbjct: 46 EPLLIRAARGEDGLPRPPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPW 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ D ILFSDIL A+G E++GP + P+ T+E ID L+ L
Sbjct: 106 HAFAPDGVILFSDILTPLPAIGVPFDISESKGPVIQSPVRTEEQVRELVPID--LDKLQF 163
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL
Sbjct: 164 VGESLKILRSEIDGKAALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLS 223
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ ++Y+I Q+++G IQIFD+ G L H +E ++ + +I++ ++ + P+
Sbjct: 224 HLAEAISDYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTECPHIPL 283
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
+ + G G +L+ + + + IGLDW+V ++ + VQGN+DP L V+
Sbjct: 284 VLYINGNGGLLERMKDI-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVL 342
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D ++ ++ G I NLGHG+ Q + V RS
Sbjct: 343 TDEIHRVVKSAGPKGHILNLGHGVFQQTPEEAVAHFFDVTRS 384
>gi|300857693|ref|YP_003782676.1| uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
FRC41]
gi|300685147|gb|ADK28069.1| uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
FRC41]
gi|302205434|gb|ADL09776.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
C231]
gi|302329988|gb|ADL20182.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
1002]
gi|308275672|gb|ADO25571.1| Uroporphyrinogen decarboxylase [Corynebacterium pseudotuberculosis
I19]
Length = 371
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 122/350 (34%), Positives = 179/350 (51%), Gaps = 21/350 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
IL+ +QG P+W MRQAGR LPEYR++R+ LD C+ PE E+TLQP+R
Sbjct: 29 NAPILDAIQGKTPTRRPVWFMRQAGRSLPEYRKVREGIG-MLDSCFMPELLAEITLQPVR 87
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G V + GP MD I ++ P ++ +L +
Sbjct: 88 RHDVDAAILFSDIVVPLKAAGVKVEIIPGRGPVMDRAIQSRADVDALPILEED---VLQV 144
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ I I+R +L TLIGF GAP+T+ASY++ GG K+H + + + + ++ L+
Sbjct: 145 ARGIEIIRDELTEQQTLIGFAGAPFTLASYLVEGGPSKNHEKTKSMMHGDPETWHALMQR 204
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L +L QI AGV +Q FD+ AG L E ++ N+ +I+ V + I
Sbjct: 205 LVPTIVRFLRTQIDAGVQAMQFFDSWAGFLTERDYRNHVLPYSTQILEEVA----DVPRI 260
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVVGNQ 299
F G +L S +G+DW VPL A E +QGNLDP L G+
Sbjct: 261 HFGVSTGELLATMSE-AGSEVMGVDWRVPLDAAAERIHARSGAKVLQGNLDPALLFAGDD 319
Query: 300 VMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ + I + + IFNLGHG+ P DP+ + V+ +
Sbjct: 320 VLKAEIERICMEADRAIAAGHATGHIFNLGHGVLPHTDPEAITRAVELIH 369
>gi|148261459|ref|YP_001235586.1| uroporphyrinogen decarboxylase [Acidiphilium cryptum JF-5]
gi|172047779|sp|A5G1D5|DCUP_ACICJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146403140|gb|ABQ31667.1| uroporphyrinogen decarboxylase [Acidiphilium cryptum JF-5]
Length = 358
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 136/341 (39%), Positives = 195/341 (57%), Gaps = 5/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G + PPP+WLMRQAGRYLPEYR++R+K NF+ +C TP E+TLQP+R
Sbjct: 7 EKPVLRVLGGEAVWPPPVWLMRQAGRYLPEYRKLREKAGNFIALCTTPPLATEVTLQPVR 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE-IYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDIL++ ALG+ +RF E EGPR++ I + L+P P+
Sbjct: 67 RFGMDAAILFSDILILPWALGQKLRFAEGEGPRLERIDGLAGLEALDPAA--LRQGTEPV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++S +R +LP TLIGF G+P+TVA YMI G D R AY + +++
Sbjct: 125 METVSRVRAELPPETTLIGFAGSPFTVACYMIDGRG-GDFPLTREVAYADPALLAAVIET 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++ + +YL QI AG D + +FD+ AG L F + RI+ +R ++P K I
Sbjct: 184 VTTATIDYLSWQIEAGADCVMLFDSWAGLLPPDLFRAHVIHPTARIVEQLRVRHPGVKVI 243
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F + G M Y T +A+G+D SV + A + QGNLDP+ L G +
Sbjct: 244 GFPRLGGLMTLPYIADTGVDAVGMDTSVDPVALARLAPRRVAFQGNLDPLLLRAGGISLG 303
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I L P IFNLGHGI P P++V +++ +RS
Sbjct: 304 QAVERIARGLEGHPHIFNLGHGIVPDTPPEHVAAVIERLRS 344
>gi|237750733|ref|ZP_04581213.1| uroporphyrinogen decarboxylase [Helicobacter bilis ATCC 43879]
gi|229373823|gb|EEO24214.1| uroporphyrinogen decarboxylase [Helicobacter bilis ATCC 43879]
Length = 341
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 123/341 (36%), Positives = 189/341 (55%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY+ RK+ KNF+D+C + E+TLQPI +
Sbjct: 3 FIDACLRKKTPYTPIWMMRQAGRYLDEYKATRKRAKNFIDLCQRVDLATEVTLQPIDILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE--IYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI +G + F E GP+ T E + +L PN L+Y +++
Sbjct: 63 VDAAILFSDILVIPYEMGLPLEFKEGFGPQFLQTITDEESLGMLKPNAHARLSY---VYE 119
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ +RK+L LIGF GAPWT+A+YMI G K + +++ YQN + + LL L+
Sbjct: 120 CVDSVRKRLAKDKALIGFSGAPWTLATYMIEGHGSKSYEKSKKMLYQNPKLLHALLQKLT 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D +YL QI AG + + +FD+ A L + ++ + + I + ++ +P I+F
Sbjct: 180 DEIKQYLSMQIKAGANAVMLFDSWANALEKSKYLEFGWFYLQDIANYLKATFPQIPLIAF 239
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+G G L++ + +G+DW + + A E + +QGNL+P RL M +G
Sbjct: 240 PRGVGAFLESLH--GKFDVLGIDWQIDMKEAKEKVGDRFVLQGNLEPARLY-DYSSMKEG 296
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +IL+V+ + IFNLGHG+ + +N + LVK VR
Sbjct: 297 VVSILEVMRNSGHIFNLGHGMIKDLPRENAIALVKLVRELS 337
>gi|300932459|ref|ZP_07147715.1| uroporphyrinogen decarboxylase [Corynebacterium resistens DSM
45100]
Length = 378
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 121/363 (33%), Positives = 179/363 (49%), Gaps = 29/363 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G P+W+MRQAGR LPEYRQ+R+ LD C+ PE E+T+QP+R
Sbjct: 22 DAPLLAAARGEKPTRRPVWMMRQAGRSLPEYRQVREGIA-MLDSCFMPELLAEITMQPVR 80
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G + V GP M + + T E P + + PI
Sbjct: 81 RHDADAAILFSDIVVPLKAAGVEIDIVPGRGPVMAEAVRTPEQIAALPEVHR--EQMEPI 138
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q IS + ++L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+
Sbjct: 139 AQGISYILEELRDDQVLIGFAGAPFTLASYLVEGGPSKNHETTKALMYSEPETWHELMRA 198
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ +L Q+ AGVD IQ+FD+ AG L ++ + +I VR I
Sbjct: 199 LTPTIIRFLQMQLEAGVDAIQLFDSWAGYLTARDYREFVQPYSKQIFDTVRPY--GVPMI 256
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK---------------EGPVQGN 288
F G G +L + + + +G+DW VP+ A E +QGN
Sbjct: 257 HFGVGTGELLGDLA-VAGPDVLGVDWRVPMDVAAERVNAALADSRLELQQGDQTKALQGN 315
Query: 289 LDPMRLVVGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
LDP L G+ + V+ I +D + IFNLGHG+ P DP + + V
Sbjct: 316 LDPAVLFAGSDAIKRHVSRICAEADNAIDRGLARGHIFNLGHGVLPSTDPDAITRAFEEV 375
Query: 342 RSE 344
++
Sbjct: 376 HNQ 378
>gi|68536152|ref|YP_250857.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium K411]
gi|68263751|emb|CAI37239.1| uroporphyrinogen decarboxylase [Corynebacterium jeikeium K411]
Length = 385
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 119/362 (32%), Positives = 180/362 (49%), Gaps = 29/362 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L +G + P+W+MRQAGR LPEYR+IRK + L+ C+ PE E+TLQP+
Sbjct: 28 KDAPFLAAARGETPSRRPVWMMRQAGRSLPEYREIRKDYG-MLESCFNPELLAEITLQPV 86
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAILFSDI+V A G ++ V GP ++ P+ T E P ++ + L
Sbjct: 87 RRHDADAAILFSDIVVPLKAAGVDLDIVAGRGPVVEHPVRTAEEVTALPIVE--SSQLDS 144
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I + I + + L + LIGF GAP+T+ASY++ GG K+H + Y ++ L+
Sbjct: 145 IVEGIGGVLQGLRDDQVLIGFAGAPFTLASYLVEGGPSKNHEVTKALMYSQPDVWHALMR 204
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +L Q AGVD +Q+FD+ AG L ++ + +I A+R
Sbjct: 205 RLTPTIIRFLQVQAEAGVDALQLFDSWAGYLTARDYREFVRPYSTQIFDAMRAY--GIPM 262
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ---------------KEGPVQG 287
I F G G +L + L + +G+DW VPL A + +QG
Sbjct: 263 IHFGVGTGELLGDMA-LAGPDVVGVDWRVPLDSAATRVSAALQEADPTAEPTARAKALQG 321
Query: 288 NLDPMRLVVGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
NLDP L G +V+ + I ++ + IFNLGHG+ P DP + +
Sbjct: 322 NLDPAVLFAGPEVVETQIARICAEADRAIERGQARGHIFNLGHGVLPNTDPDAITRAFEE 381
Query: 341 VR 342
V
Sbjct: 382 VH 383
>gi|325000858|ref|ZP_08121970.1| uroporphyrinogen-III decarboxylase [Pseudonocardia sp. P1]
Length = 356
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 120/342 (35%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L+ ++G + P+W MRQAGR LPEYR +R + L+ C TP+ T E+TLQP+RR
Sbjct: 19 SPFLDAVRGRRPSRLPVWFMRQAGRSLPEYRALR-QHNGMLEACLTPDLTCEITLQPVRR 77
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAILFSDI+V G V V GP +D P+ T P +L +
Sbjct: 78 HGVDAAILFSDIVVPLYLAGIGVDIVPGTGPVVDHPVRTAAAVEALP--ELAPEQADAVG 135
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+IS+L +L LIGF GAP+T+ASY+I GG ++H + + ++ L+ L
Sbjct: 136 DAISLLLPEL-GETPLIGFAGAPFTLASYLIEGGPSRNHEKTKALMRSEPEVWHALMAKL 194
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ ++ +L Q+ AGVD +Q+FD+ AG L E ++ + ++SA+ I
Sbjct: 195 ARLTGAFLQRQVAAGVDAVQLFDSWAGALSERDYREFVLPHSSAVLSALAGS--GLPRIH 252
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMID 303
F G + ++ IG+DW PL A PVQGNLDP L G +
Sbjct: 253 FGVGTAELYGAMTE-AGADVIGVDWRTPLDVAAARAGGAVPVQGNLDPAVLFAGQDAIDA 311
Query: 304 GVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I +FNLGHG+ PQ DP V V+T+ S+
Sbjct: 312 DVARIAAEGARCPGHVFNLGHGVLPQTDPDVVTRTVETIHSQ 353
>gi|299822151|ref|ZP_07054037.1| uroporphyrinogen decarboxylase [Listeria grayi DSM 20601]
gi|299815680|gb|EFI82918.1| uroporphyrinogen decarboxylase [Listeria grayi DSM 20601]
Length = 350
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 110/347 (31%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E L + + P W MRQAGR PEYR +++K+ + ++ + PE +T
Sbjct: 1 MKEISNDLFLRAARREKVERLPAWYMRQAGRSQPEYRALKEKY-SLFEITHQPELCSYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ Y DAA+L+ DI+ +G +V GP + PI + D +
Sbjct: 60 RLPVENYGVDAAVLYKDIMSPLPGMGVDVEIKTGIGPVIAHPIRRYQDVESLAAFDAK-S 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ I ++I +LR++ + LIGF GAP+T+ASY++ GG K++ Q + YQ+ +
Sbjct: 119 QVPYILETIKLLREE-QLDVPLIGFGGAPFTLASYLVEGGPSKNYYQTKALMYQDEATWF 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+D L+ ++A+YL AQI AG +Q+FD+ G L ++ Y S+ I + V+ K+P
Sbjct: 178 ALMDKLATMTADYLSAQIEAGASAVQLFDSWVGALSREDYHYYIKPSIRMITTKVKAKHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A AG++L + + + +G+DW + ++ A ++ E +QGNLDP L+
Sbjct: 238 QTPIIMQAVAAGHLLPEWNDVP-IDVVGIDWRMSIAAARDILPEKALQGNLDPALLLAPQ 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I + + FIFNLGHG+ P+V P + L V SE
Sbjct: 297 KSFDKAKTIIGEAVKQPGFIFNLGHGVFPEVSPSTLKQLTALVHSES 343
>gi|262184015|ref|ZP_06043436.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
Length = 346
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ ++ G+ + PP+W MRQAGR LPEYR++R+ + LD C+ PE E+T
Sbjct: 1 MSRLSDAPLIAAATGHTPSRPPVWFMRQAGRSLPEYRKVREGI-SMLDSCFMPELLAEIT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR++ D AILFSDI+V A G V V GP MD P+ T+E P +D+
Sbjct: 60 LQPVRRHDVDGAILFSDIVVPLKAAGVGVEIVPGRGPVMDAPVRTKEDVANLPILDVD-- 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + Q I I+ +L + LIGF GAP+T+ASY+I GG K+H + + + + ++
Sbjct: 118 -VPEVRQGIEIILNELTDKQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHSDPDTWH 176
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L+ +L Q+ AG+D +Q+FD+ AG L E ++ + +I ++
Sbjct: 177 RLMERLTPTIISFLELQLDAGIDAMQLFDSWAGYLNERDYREFVLPYSEQI---LKVAEG 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G G +L S +G+D+ V + A +QGNLDP L G
Sbjct: 234 RVPRIHFGVGTGELLGAMSE-AGSEVMGVDYRVSMDAAAARVNADILQGNLDPALLFAGE 292
Query: 299 QVMIDGVNAI---LDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V AI +D + I+NLGHG+ P + + V V + E
Sbjct: 293 DAVRKEVRAIKAEVDAARAAGNLRGHIWNLGHGVLPTTEAEAVTRAVAIIHEE 345
>gi|47097353|ref|ZP_00234907.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 1/2a
F6854]
gi|254899086|ref|ZP_05259010.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J0161]
gi|254912773|ref|ZP_05262785.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J2818]
gi|254937100|ref|ZP_05268797.1| uroporphyrinogen decarboxylase [Listeria monocytogenes F6900]
gi|47014276|gb|EAL05255.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609702|gb|EEW22310.1| uroporphyrinogen decarboxylase [Listeria monocytogenes F6900]
gi|293590767|gb|EFF99101.1| uroporphyrinogen decarboxylase [Listeria monocytogenes J2818]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G V GP + +PI + + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVEVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLG-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L+ + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLEEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKQLTNYIHERS 343
>gi|16804251|ref|NP_465736.1| uroporphyrinogen decarboxylase [Listeria monocytogenes EGD-e]
gi|224500988|ref|ZP_03669295.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-561]
gi|254826899|ref|ZP_05231586.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N3-165]
gi|254831351|ref|ZP_05236006.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 10403S]
gi|255029962|ref|ZP_05301913.1| uroporphyrinogen decarboxylase [Listeria monocytogenes LO28]
gi|284802659|ref|YP_003414524.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5578]
gi|284995801|ref|YP_003417569.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5923]
gi|23813994|sp|Q8Y564|DCUP_LISMO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|16411682|emb|CAD00290.1| hemE [Listeria monocytogenes EGD-e]
gi|258599279|gb|EEW12604.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N3-165]
gi|284058221|gb|ADB69162.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5578]
gi|284061268|gb|ADB72207.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 08-5923]
Length = 353
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 101/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI + + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L+ + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLEEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKQLTNYIHERS 343
>gi|32491257|ref|NP_871511.1| hypothetical protein WGLp508 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340035|sp|Q8CWI5|DCUP_WIGBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|25166464|dbj|BAC24654.1| hemE [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 360
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 124/346 (35%), Positives = 188/346 (54%), Gaps = 7/346 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L + PIW+MRQ+GRYL EY+ I+K+ K+FL +C TP+ + + L PI+
Sbjct: 6 NDSYLRSALRKSVKRTPIWIMRQSGRYLKEYQSIKKQAKDFLSLCKTPDLSSKAALIPIK 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+++ DAAI+FSDIL++ A+G +V F EN GP +PI++ N N+ L +
Sbjct: 66 KFSLDAAIIFSDILILPYAMGMDVNFYENLGPSFLNPISSISDMK-NLNVPDPEKNLKYV 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
SI I+ K+L I LIGF G+PWT+A YMI G K + + YQNS+ ++LL
Sbjct: 125 LDSIKIICKELDKKIPLIGFSGSPWTLACYMIEGKCNKIFSKIKKMIYQNSKELHFLLKK 184
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
+++ YL +QI GV+ I IFDT G L E ++ Y+ + II + KY
Sbjct: 185 ITNSIILYLNSQIIYGVNAIIIFDTWGGILTEEKYCEYSLHYMSLIIKNLFCKYKGNKIP 244
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
F K G +K + + + I LDWSV + +A ++ + +QGN+DP L
Sbjct: 245 VTIFTKNGGQWIKKIAK-SGCDVIALDWSVDIEYARKQVNGKIAIQGNMDPFELYGSFSS 303
Query: 301 MIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + N IL G + IF+LGHGI P+NV L+++V +
Sbjct: 304 IEEETNKILSKFGYNSGHIFSLGHGIYKDTPPENVNFLIESVHNLS 349
>gi|87303283|ref|ZP_01086076.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 5701]
gi|87282178|gb|EAQ74139.1| uroporphyrinogen decarboxylase [Synechococcus sp. WH 5701]
Length = 352
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 103/344 (29%), Positives = 172/344 (50%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +L +G + PP+W+MRQAGRY+ YR +R + F + P+ + E+++
Sbjct: 1 MADSLPLLLRAARGEQVERPPVWMMRQAGRYMKVYRDLRDRHPGFRERSEQPDLSYEISM 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP R + D ILFSDIL +G + +E++GP +DP + L
Sbjct: 61 QPYRAFQPDGVILFSDILTPLPGMGIDFDIIESKGPIIDPPIRTLAQVEALRPLEPAASL 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + + LR+ + N ++GF GAPWT+A+Y + G K++ + A+Q + L
Sbjct: 121 PFVGEVLGRLRQSVGNGAAVLGFVGAPWTLAAYAVEGRSSKNYAVIKAMAFQEPALLHRL 180
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+D A Y+ QI +G V+Q+FD+ AG L +F+ +AA R++ V+ K+P+
Sbjct: 181 LGLLADSIAAYVSYQIESGAQVVQLFDSWAGQLSPIDFDVFAAPYQKRVVDQVKAKHPDT 240
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQ 299
I + G+ +L+ T + I LDW+V ++ L + VQGN+DP L +
Sbjct: 241 PLILYISGSAGVLERMA-TTGVDFISLDWTVDMADGCARLPQHLGVQGNVDPGLLFGTPE 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + I NLGHGI P +N + +S
Sbjct: 300 AIRARIVDTVLKARGRRHILNLGHGILPGTPEENARVFFEAGKS 343
>gi|15842216|ref|NP_337253.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CDC1551]
gi|308371095|ref|ZP_07667089.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu003]
gi|308373472|ref|ZP_07432466.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu005]
gi|308374660|ref|ZP_07436885.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu006]
gi|308375513|ref|ZP_07444188.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu007]
gi|308377092|ref|ZP_07668428.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu008]
gi|13882505|gb|AAK47067.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CDC1551]
gi|308329841|gb|EFP18692.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu003]
gi|308337499|gb|EFP26350.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu005]
gi|308341172|gb|EFP30023.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu006]
gi|308346115|gb|EFP34966.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu007]
gi|308348927|gb|EFP37778.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu008]
Length = 372
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 16 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 74
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 75 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 133
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 134 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 191
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 192 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 251
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +QG
Sbjct: 252 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQG 309
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 310 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 369
Query: 342 RS 343
S
Sbjct: 370 HS 371
>gi|88854543|ref|ZP_01129210.1| uroporphyrinogen decarboxylase [marine actinobacterium PHSC20C1]
gi|88816351|gb|EAR26206.1| uroporphyrinogen decarboxylase [marine actinobacterium PHSC20C1]
Length = 352
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 121/343 (35%), Positives = 184/343 (53%), Gaps = 10/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
I+ +G+ P+W MRQAGR LPEYR++R+ L+ C TPE E+TLQP+R
Sbjct: 16 NSPIIRAYRGDRPETTPVWFMRQAGRSLPEYRKLREG-NEMLEACLTPELASEITLQPVR 74
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI++ A G V V GP +PI T E ID PI
Sbjct: 75 RHKVDAAIFFSDIVIPAKLAGVEVEIVPGRGPVFANPIRTAEDVAKLRPID--PAAFAPI 132
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ +L + LIGF GAP+T+ASYM+ GG KD + R Y + + + LL++
Sbjct: 133 REAVAQTVAQL-GNTPLIGFAGAPFTLASYMVEGGPSKDQQRARTLMYSDPQTWANLLNW 191
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D++ E+LIAQ+ AG +Q+FD+ G L E ++ A R S +R + +
Sbjct: 192 CADIAGEFLIAQVEAGASAVQLFDSWVGSLSEQQYVRRVAPHSKRAFSHLRGY--DVPKV 249
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G+G +L+ + ++ +G+DW +PL A L P+QGN+DP L V+
Sbjct: 250 HFGVGSGEVLQAMHGI-GADVMGVDWRIPLDEADRRLGGGIPLQGNIDPALLGAPWHVLE 308
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V +++ P + NLGHG+ P+ DP + +V+ V E
Sbjct: 309 AHVRDVMNRGRVAPAHVVNLGHGVGPETDPDVLTKIVELVHQE 351
>gi|157114047|ref|XP_001657957.1| uroporphyrinogen decarboxylase [Aedes aegypti]
gi|108877461|gb|EAT41686.1| uroporphyrinogen decarboxylase [Aedes aegypti]
Length = 325
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 112/324 (34%), Positives = 176/324 (54%), Gaps = 8/324 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE++++R K +F ++C TPE E+T+QP+RR++ DA+I+FSDILVI AL
Sbjct: 1 MRQAGRYLPEFQEVRAK-HDFFEVCRTPELACEVTMQPLRRFDLDASIIFSDILVIPQAL 59
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G V + GP + L N ++ L + +I+++R L + L GF
Sbjct: 60 GITVEMHKGVGPVLPQPLVTPDDLERLNTTGSIDRLKYVGDAITMMRHMLDGKVPLYGFT 119
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWT+ YMI GG K + + + A LL+ L+D +YL+ Q+ AG ++Q
Sbjct: 120 GAPWTLMGYMIEGGGSKTMSKAKAWLENYPEASTKLLNLLTDQIVDYLLMQVKAGAQILQ 179
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRRL 259
+F++ A L + ++ N A + RI + +K+ F+KGA + L +
Sbjct: 180 VFESSAEHLSKEQYLNIALPYLKRIRDDLHKKFDEEGVTPVPMTLFSKGAMHSLTEQAQ- 238
Query: 260 TDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
T + IGLDW++ A +L +QGNLDP + + + + V ++ G +I
Sbjct: 239 TGYDVIGLDWTIDPEEARKLAGPNVTLQGNLDPQDMYKSPEELRELVLTMVRKFGKHRYI 298
Query: 319 FNLGHGITPQVDPKNVLDLVKTVR 342
NLGHGITPQ +++ LV+ V
Sbjct: 299 ANLGHGITPQTPVESMSVLVQAVH 322
>gi|289553536|ref|ZP_06442746.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
605]
gi|289438168|gb|EFD20661.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
605]
Length = 360
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 4 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 62
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 63 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 121
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 122 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 179
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 180 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 239
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +QG
Sbjct: 240 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQG 297
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 298 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 357
Query: 342 RS 343
S
Sbjct: 358 HS 359
>gi|227832134|ref|YP_002833841.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
gi|227453150|gb|ACP31903.1| uroporphyrinogen decarboxylase [Corynebacterium aurimucosum ATCC
700975]
Length = 349
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 118/353 (33%), Positives = 182/353 (51%), Gaps = 17/353 (4%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ ++ G+ + PP+W MRQAGR LPEYR++R+ + LD C+ PE E+T
Sbjct: 4 MSRLSDAPLIAAATGHTPSRPPVWFMRQAGRSLPEYRKVREGI-SMLDSCFMPELLAEIT 62
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN 118
LQP+RR++ D AILFSDI+V A G V V GP MD P+ T+E P +D+
Sbjct: 63 LQPVRRHDVDGAILFSDIVVPLKAAGVGVEIVPGRGPVMDAPVRTKEDVANLPILDVD-- 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + Q I I+ +L + LIGF GAP+T+ASY+I GG K+H + + + + ++
Sbjct: 121 -VPEVRQGIEIILNELTDKQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHSDPDTWH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L+ +L Q+ AG+D +Q+FD+ AG L E ++ + +I ++
Sbjct: 180 RLMERLTPTIISFLELQLDAGIDAMQLFDSWAGYLNERDYREFVLPYSEQI---LKVAEG 236
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G G +L S +G+D+ V + A +QGNLDP L G
Sbjct: 237 RVPRIHFGVGTGELLGAMSE-AGSEVMGVDYRVSMDAAAARVNADILQGNLDPALLFAGE 295
Query: 299 QVMIDGVNAI---LDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V AI +D + I+NLGHG+ P + + V V + E
Sbjct: 296 DAVRKEVRAIKAEVDAARAAGNLRGHIWNLGHGVLPTTEAEAVTRAVAIIHEE 348
>gi|162147010|ref|YP_001601471.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209544073|ref|YP_002276302.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|229889832|sp|A9HDX7|DCUP_GLUDA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161785587|emb|CAP55158.1| Uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531750|gb|ACI51687.1| uroporphyrinogen decarboxylase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 353
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 134/354 (37%), Positives = 196/354 (55%), Gaps = 13/354 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + + +L VLQG + PPPIWLMRQAGRYLPE+R +R + +F+ C TP+ E+TL
Sbjct: 1 MTDTGKPLLRVLQGEAVWPPPIWLMRQAGRYLPEFRALRDQA-DFITRCMTPDLATEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY D AILFSDIL++ A+G+++ FV +GP + I + E L + +
Sbjct: 60 QPIRRYAMDGAILFSDILILPWAMGQSLDFVAGKGPILGAIRS-EADLARLDPKRVPDAT 118
Query: 121 LPIFQSISILRKKLPN----------HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P+ +++S LR L +TL+GF GAP+TVA YM+ G ++ R A
Sbjct: 119 APVMETLSRLRAILDGPDPIGAAQGGRVTLLGFAGAPFTVACYMVEGHGSREFDATRGMA 178
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRII 230
Y + F+ L+ L+ +A+ L+AQI AG + + +FD+ +G L +F + I+
Sbjct: 179 YSDPLLFDRLMATLTQATADMLVAQIDAGAEAVMLFDSWSGLLPPAQFRRHVIAPTRAIV 238
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNL 289
++ + P I F + AG M Y R T + LD ++ L G VQGNL
Sbjct: 239 QEIQARRPGVPVIGFPRLAGIMAAEYARETGLRVMALDTGADMAAMAGLLPPGMTVQGNL 298
Query: 290 DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
DP+ L+ G M AI D + P +FNLGHG+ P P++V DLV+TVR
Sbjct: 299 DPLLLLAGGDAMAQEARAIRDAMKGRPHVFNLGHGVVPPTPPEHVGDLVRTVRE 352
>gi|313622754|gb|EFR93095.1| uroporphyrinogen decarboxylase [Listeria innocua FSL J1-023]
Length = 350
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVKEVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITTARQKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L K +
Sbjct: 297 KCLAETERILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTKYIHERS 343
>gi|116873645|ref|YP_850426.1| uroporphyrinogen decarboxylase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123466540|sp|A0AKW5|DCUP_LISW6 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116742523|emb|CAK21647.1| uroporphyrinogen decarboxylase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 350
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 179/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLRAARKEQVDKIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGIDVEIKSGIGPVIHNPIRTFQDVDKLSIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + LIGF GAP+T+ASYMI GG K++ + F Y+ ++
Sbjct: 120 -VPYVLDTIKLLADDML-EVPLIGFAGAPFTLASYMIEGGPSKNYHLTKSFMYREPEVWS 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTATYLIAQINAGASAVQLFDSWVGALSRADYTKYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L+ + + + +G+DW L+ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLEEWETMP-LDVVGVDWRETLTGARKKVPSKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + I + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEEAERIIQEGILKPGYIFNLGHGVFPEVQPEMLKKLTNYIHDRS 343
>gi|157827861|ref|YP_001496925.1| uroporphyrinogen decarboxylase [Rickettsia bellii OSU 85-389]
gi|166234281|sp|A8GYD8|DCUP_RICB8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157803165|gb|ABV79888.1| uroporphyrinogen decarboxylase [Rickettsia bellii OSU 85-389]
Length = 340
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 133/327 (40%), Positives = 203/327 (62%), Gaps = 2/327 (0%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PPIWLMRQAGRYLPEY +RK+ KNFL+ CY + E+TLQPI+R+ FDAAI+FSDI
Sbjct: 13 NKPPIWLMRQAGRYLPEYMAVRKEVKNFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
LV+ ALG V F EN GP + ++E + D + L +++ + +RK+LP
Sbjct: 73 LVLPHALGWEVDFKENIGPLLKQFKSKEDFKYL--QDNSNDKLEKVYEIVKKVRKELPKS 130
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+LIGF G+PWTV +YM+ G +D ++ F Y+N LL+F+++ + +LI QI
Sbjct: 131 TSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIK 190
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G ++I+IFD+ AG L E EF+ + +II +++ +P+ I+F KGAG + + +
Sbjct: 191 SGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKFL 250
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
++ I +D +PL + VQGNLDP+ L+ +++ + ++ IL ++ + F
Sbjct: 251 EEVPTDIIAIDPLIPLEKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKNF 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P+ P+NV LVK +R
Sbjct: 311 IFNLGHGILPETPPENVEFLVKCIREY 337
>gi|169630069|ref|YP_001703718.1| uroporphyrinogen decarboxylase (HemE) [Mycobacterium abscessus ATCC
19977]
gi|169242036|emb|CAM63064.1| Probable uroporphyrinogen decarboxylase (HemE) [Mycobacterium
abscessus]
Length = 389
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 117/346 (33%), Positives = 173/346 (50%), Gaps = 15/346 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L G V + PP+W MRQAGR LPEYR +R LD C+ PE E+TLQPIRR
Sbjct: 50 SPYLVAAAGGVPSHPPVWFMRQAGRSLPEYRAVRADHA-MLDACFNPELVCEITLQPIRR 108
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAILFSDI+V A G ++ V + GP + +P+ T P ++ + +
Sbjct: 109 HRVDAAILFSDIVVPLKAAGIDLDIVPDVGPVIANPVRTTADVAALPRLE--PGQVEAVS 166
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ +L +L LIGF GAP+T+ASY++ GG + H + + + + ++ L+ L
Sbjct: 167 AAVRLLVGEL-GATPLIGFAGAPFTLASYLVEGGPSRHHQRTKALLLGDPQTWHALMTAL 225
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D++ +L AQ+ AGVD +Q+FD+ AG L ++ RI
Sbjct: 226 TDITIAFLRAQLDAGVDALQLFDSWAGALSLADYRAAVLPHSTRIFQEFAGV--GVPMTH 283
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
F G +L + +G+DW PL+ A + +QGNLDP L+ G V+
Sbjct: 284 FGVGTAELLGAMGE-AGATVVGVDWRTPLNVAASRVGSGKALQGNLDPAVLLAGWPVVES 342
Query: 304 GVNAILDVL------GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I+ G+ IFNLGHG+ P DP + D V S
Sbjct: 343 EVRRIVAEGRQAVADGAAGHIFNLGHGVLPDTDPAVLTDAAALVHS 388
>gi|31793850|ref|NP_856343.1| uroporphyrinogen decarboxylase [Mycobacterium bovis AF2122/97]
gi|45476849|sp|Q7TY47|DCUP_MYCBO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|31619444|emb|CAD94882.1| PUTATIVE UROPORPHYRINOGEN DECARBOXYLASE HEME (UROPORPHYRINOGEN III
DECARBOXYLASE) (URO-D) (UPD) [Mycobacterium bovis
AF2122/97]
Length = 357
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 1 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 60 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 119 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 177 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDS-------NAIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +QG
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGGVVGVDWRTPLTDAAARVVPGTALQG 294
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 295 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 354
Query: 342 RS 343
S
Sbjct: 355 HS 356
>gi|16801379|ref|NP_471647.1| uroporphyrinogen decarboxylase [Listeria innocua Clip11262]
gi|23814002|sp|Q929G1|DCUP_LISIN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|16414827|emb|CAC97543.1| hemE [Listeria innocua Clip11262]
Length = 350
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAQYIRPVIEMIVKEVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITTARQKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L K +
Sbjct: 297 KCIAETERILQEGILEPGYIFNLGHGVFPEVPPEMLKKLTKYIHERS 343
>gi|308232208|ref|ZP_07415295.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu001]
gi|308369824|ref|ZP_07419197.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu002]
gi|308372365|ref|ZP_07428403.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu004]
gi|308378062|ref|ZP_07481397.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu009]
gi|308379279|ref|ZP_07485732.2| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu010]
gi|308380438|ref|ZP_07669195.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu011]
gi|308214615|gb|EFO74014.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu001]
gi|308326261|gb|EFP15112.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu002]
gi|308333432|gb|EFP22283.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu004]
gi|308353699|gb|EFP42550.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu009]
gi|308357545|gb|EFP46396.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu010]
gi|308361479|gb|EFP50330.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis SUMu011]
Length = 366
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 10 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 68
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 69 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 127
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 128 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 185
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 186 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 245
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +QG
Sbjct: 246 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQG 303
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 304 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 363
Query: 342 RS 343
S
Sbjct: 364 HS 365
>gi|300779909|ref|ZP_07089765.1| uroporphyrinogen decarboxylase [Corynebacterium genitalium ATCC
33030]
gi|300534019|gb|EFK55078.1| uroporphyrinogen decarboxylase [Corynebacterium genitalium ATCC
33030]
Length = 349
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 119/356 (33%), Positives = 181/356 (50%), Gaps = 20/356 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M+ R ++ G + P+W MRQAGR LPEYR R+ LD C+ PE E
Sbjct: 1 MSRRTLDHAPLIAAATGRTPSRTPVWFMRQAGRSLPEYRATREGIA-MLDSCFMPELLAE 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF 116
+T+QP+RR++ DAAILFSDI+V A G +V V GP M P+ ++ P ++
Sbjct: 60 ITMQPVRRHDMDAAILFSDIVVPLKAAGVDVEIVPGRGPVMGSPVRSRADVDALPVLE-- 117
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + + ISI+ +L + LIGF GAP+T+ASY+I GG K+H + + + +
Sbjct: 118 -GDVADVAEGISIILSELTDTQALIGFVGAPFTLASYLIEGGPSKNHEKTKAMMHGDPDT 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
++ L+ L +L Q+ AG+D +Q+FD+ AG L E ++ Y I++ V +
Sbjct: 177 WHALMSKLVPTITAFLRIQVEAGIDAMQLFDSWAGFLTEADYRRYVLPYSTEILATVAGE 236
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV 295
I F G +L S +G+DW VPL A E +QGNLDP L
Sbjct: 237 ---IPRIHFGVATGELLGAMSE-AGSEVMGVDWRVPLDRAAERFTAPKVLQGNLDPALLF 292
Query: 296 VGNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
G V+ + + I + + IFNLGHG+ P+ DP + + V+ + E
Sbjct: 293 AGTDVVREEIARIKGEAEYAVRAGTATGHIFNLGHGVLPETDPDAITEAVRIIHEE 348
>gi|117928589|ref|YP_873140.1| uroporphyrinogen decarboxylase [Acidothermus cellulolyticus 11B]
gi|167012311|sp|A0LUP4|DCUP_ACIC1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|117649052|gb|ABK53154.1| uroporphyrinogen decarboxylase [Acidothermus cellulolyticus 11B]
Length = 368
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 126/341 (36%), Positives = 182/341 (53%), Gaps = 13/341 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L V +G P+W MRQAGR LPEYR R + L C + VELTLQP+RRY
Sbjct: 12 LLRVCRGEPAPVTPVWFMRQAGRALPEYRAARGETP-MLQACLDRDLIVELTLQPVRRYR 70
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI V G ++R GP D P+ +D + PI ++
Sbjct: 71 VDAAILFSDITVPLALSGVSLRIEPGVGPVFDQPVRRAADVARIRPLDR--GSMTPIVEA 128
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L I LIGF GAP+T+ASY++ GG +DH + Y + ++ LLD L+D
Sbjct: 129 VRLLVGELAG-IPLIGFAGAPFTLASYLVEGGPSRDHAVTKALMYSDPATWHALLDRLAD 187
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+S E+L+AQI AGV V+Q+FD+ AG L ++ Y A G++++ + I F
Sbjct: 188 ISREFLLAQIDAGVSVVQVFDSWAGALHPDDYRRYVAPHSGKLLAGLP-----VPRIHFG 242
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L +R + ++ +G+DW VPL A + + VQGNLDP + V+ V
Sbjct: 243 VGTGELLPQFRAV-GADVVGVDWRVPLDVAARRIGADAVVQGNLDPAVVFAPWPVLEAAV 301
Query: 306 NAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L + IFNLGHG+ P DP + +V V +
Sbjct: 302 RDVLIRGRAARGHIFNLGHGVLPSTDPGVLAAIVDFVHAWS 342
>gi|217963626|ref|YP_002349304.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HCC23]
gi|254767697|sp|B8DF98|DCUP_LISMH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|217332896|gb|ACK38690.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HCC23]
gi|307571798|emb|CAR84977.1| uroporphyrinogen decarboxylase [Listeria monocytogenes L99]
Length = 350
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+S V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSEVKAAHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A E +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSAREKVPTKAIQGNLDPSTLLAPA 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEEAERILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|67459792|ref|YP_247416.1| uroporphyrinogen decarboxylase [Rickettsia felis URRWXCal2]
gi|75535820|sp|Q4UJN8|DCUP_RICFE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|67005325|gb|AAY62251.1| Uroporphyrinogen decarboxylase [Rickettsia felis URRWXCal2]
Length = 346
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 136/337 (40%), Positives = 203/337 (60%), Gaps = 3/337 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+ N N PIW MRQAGRYLPEY+++R+K KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKRNS-NKIPIWFMRQAGRYLPEYKKVREKTKNFLDFCYDVNKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + N L +++
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYL--QSNPNNKLEKVYE 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I ++++LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F++
Sbjct: 119 IIKKVKEELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLNFIT 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ +A++L+ Q +G DV+++FD+ +G LGE EF + +II V+ +P I+F
Sbjct: 179 EKTADHLVNQAKSGADVLKLFDSWSGVLGEEEFTEFVIEPTKKIILKVKEDFPKIPIIAF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGA + + + + + + +D VPL E + VQGNLDP+ L+ +++ +
Sbjct: 239 PKGAVLLYEKFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIKEKA 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL + FIFNLGHGI P+ P+NV L + VR
Sbjct: 299 YKILQTMKGKNFIFNLGHGILPETPPENVKFLTEYVR 335
>gi|158316931|ref|YP_001509439.1| uroporphyrinogen decarboxylase [Frankia sp. EAN1pec]
gi|158112336|gb|ABW14533.1| uroporphyrinogen decarboxylase [Frankia sp. EAN1pec]
Length = 360
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 12/343 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L G+ + P+W MRQAGR LPEYR +R LD C + E+TLQP+RR
Sbjct: 26 SPFLRAAAGDRPDSVPVWFMRQAGRVLPEYRALRATTA-MLDSCRNADMVTEITLQPVRR 84
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLLPI 123
+ DAAI FSDI++ A+G +V V GP + P+ ++ +L P L + +
Sbjct: 85 FRPDAAIFFSDIVLPLAAVGVDVDIVAGVGPVVAHPVRAPSDLDVLRP---LEPGDVPYV 141
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ L ++L LIGF GAP+T+ASY+I GG ++H + + Y ++ LL
Sbjct: 142 SEAVASLVREL-GQTPLIGFAGAPFTLASYLIEGGPSRNHTRTKALMYAEPALWHDLLGR 200
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++A +L Q+ AG D IQ+FD+ AG L E ++ Y A R+++A I
Sbjct: 201 LADITAAFLRVQVDAGADAIQLFDSWAGALSEDDYLRYVAPHSTRVLAAFAD--DGIPRI 258
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L ++ +G+DW VPL A + VQGNLDP + + V+
Sbjct: 259 HFGVNTGELLGAMGA-AGADVVGVDWRVPLDEAARRVGPGRAVQGNLDPAAVFAPSDVLA 317
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V + + P IFN GHG+ P+ DP + +V V
Sbjct: 318 AKVRDVCRRGAAAPGHIFNFGHGVLPESDPGVLAHIVDLVHQF 360
>gi|15609815|ref|NP_217194.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Rv]
gi|121638553|ref|YP_978777.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662519|ref|YP_001284042.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
gi|148823868|ref|YP_001288622.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis F11]
gi|215404642|ref|ZP_03416823.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis 02_1987]
gi|215428104|ref|ZP_03426023.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T92]
gi|215431618|ref|ZP_03429537.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|215446932|ref|ZP_03433684.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|218754415|ref|ZP_03533211.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis GM 1503]
gi|224991045|ref|YP_002645734.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253798240|ref|YP_003031241.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
1435]
gi|254232784|ref|ZP_04926111.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis C]
gi|254551734|ref|ZP_05142181.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187695|ref|ZP_05765169.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis CPHL_A]
gi|260201805|ref|ZP_05769296.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|260205988|ref|ZP_05773479.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis K85]
gi|289444220|ref|ZP_06433964.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|289448333|ref|ZP_06438077.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CPHL_A]
gi|289575376|ref|ZP_06455603.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
K85]
gi|289746479|ref|ZP_06505857.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
02_1987]
gi|289751330|ref|ZP_06510708.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
T92]
gi|289754780|ref|ZP_06514158.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|289758806|ref|ZP_06518184.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|289762849|ref|ZP_06522227.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis GM
1503]
gi|294994229|ref|ZP_06799920.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis 210]
gi|297635286|ref|ZP_06953066.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
4207]
gi|297732282|ref|ZP_06961400.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
R506]
gi|307085372|ref|ZP_07494485.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu012]
gi|313659615|ref|ZP_07816495.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis KZN
V2475]
gi|6014939|sp|O53231|DCUP_MYCTU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234255|sp|A1KM16|DCUP_MYCBP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234259|sp|A5U630|DCUP_MYCTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767698|sp|C1AFD7|DCUP_MYCBT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|2791429|emb|CAA16021.1| PROBABLE UROPORPHYRINOGEN DECARBOXYLASE HEME (UROPORPHYRINOGEN III
DECARBOXYLASE) (URO-D) (UPD) [Mycobacterium tuberculosis
H37Rv]
gi|121494201|emb|CAL72679.1| Putative uroporphyrinogen decarboxylase hemE [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124601843|gb|EAY60853.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis C]
gi|148506671|gb|ABQ74480.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
gi|148722395|gb|ABR07020.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
F11]
gi|224774160|dbj|BAH26966.1| uroporphyrinogen decarboxylase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319743|gb|ACT24346.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
1435]
gi|289417139|gb|EFD14379.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T46]
gi|289421291|gb|EFD18492.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CPHL_A]
gi|289539807|gb|EFD44385.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
K85]
gi|289687007|gb|EFD54495.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
02_1987]
gi|289691917|gb|EFD59346.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
T92]
gi|289695367|gb|EFD62796.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis EAS054]
gi|289710355|gb|EFD74371.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis GM
1503]
gi|289714370|gb|EFD78382.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T85]
gi|308365083|gb|EFP53934.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
SUMu012]
gi|323718673|gb|EGB27835.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
CDC1551A]
gi|326904292|gb|EGE51225.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis
W-148]
gi|328458012|gb|AEB03435.1| uroporphyrinogen decarboxylase hemE [Mycobacterium tuberculosis KZN
4207]
Length = 357
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 185/362 (51%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 1 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 60 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 119 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 177 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +QG
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQG 294
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 295 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 354
Query: 342 RS 343
S
Sbjct: 355 HS 356
>gi|315304386|ref|ZP_07874689.1| uroporphyrinogen decarboxylase [Listeria ivanovii FSL F6-596]
gi|313627242|gb|EFR96072.1| uroporphyrinogen decarboxylase [Listeria ivanovii FSL F6-596]
Length = 350
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + + P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKESVGRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVEQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIKTYQDVERLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWK 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A+YLIAQI AG +Q+FD+ AG L ++ Y ++ +II ++ +P
Sbjct: 178 VLMEKLGRMTADYLIAQIKAGASAVQLFDSWAGALSRRDYATYIRPTIEKIIVEIKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW L+ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWEHMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCIEETERILQEGVLKPGYIFNLGHGVFPEVSPEMLKKLTTYIHERS 343
>gi|118618642|ref|YP_906974.1| uroporphyrinogen decarboxylase [Mycobacterium ulcerans Agy99]
gi|166234260|sp|A0PT34|DCUP_MYCUA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118570752|gb|ABL05503.1| uroporphyrinogen decarboxylase HemE [Mycobacterium ulcerans Agy99]
Length = 353
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 122/358 (34%), Positives = 185/358 (51%), Gaps = 21/358 (5%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R++ + L C+ PE
Sbjct: 1 MSTRRDLPQSPYLAAVAGRKPSRVPVWFMRQAGRSLPEYRALRRQ-HSMLAACFEPEVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QPIRRY+ DAAILFSDI+V A G ++ V + GP + P+ T ID
Sbjct: 60 EVTMQPIRRYHVDAAILFSDIVVPLRAAGVDLDIVADVGPVIAAPVRTVADVDAIKPID- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ ++ +L +L LIGF GAP+T+ASY++ GG + H + +
Sbjct: 119 -SQSIAPVLDAVELLVAEL-GDTPLIGFAGAPFTLASYLVEGGPSRHHARTKAMMLAEPA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+D++ E+L+ QI AGVD IQ+FD+ AG L ++ YA R+ + +
Sbjct: 177 TWHALMTKLTDLTIEFLLGQIRAGVDAIQVFDSWAGMLSLADYRQYALPHSARVFATLAE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTD---SNAIGLDWSVPL-SFALELQKEGPVQGNLDP 291
F G +L + +G+DW L A +Q +QGNLDP
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSEAVKPGTAKVVGVDWRTALADAAARVQPGTALQGNLDP 294
Query: 292 MRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G + A++D G+ ++FNLGHG+ PQ DP + DLV V S
Sbjct: 295 VVLLAGWPAVERAARAVVDDGRRAVDAGAAGYVFNLGHGVLPQTDPGVLTDLVSLVHS 352
>gi|157829207|ref|YP_001495449.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933933|ref|YP_001650722.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. Iowa]
gi|166234283|sp|A8GU66|DCUP_RICRS RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189083015|sp|B0BVQ6|DCUP_RICRO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157801688|gb|ABV76941.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165909020|gb|ABY73316.1| uroporphyrinogen decarboxylase [Rickettsia rickettsii str. Iowa]
Length = 346
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 139/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN + PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-DKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNY-----KLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTKFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|157965040|ref|YP_001499864.1| uroporphyrinogen decarboxylase [Rickettsia massiliae MTU5]
gi|157844816|gb|ABV85317.1| Uroporphyrinogen decarboxylase [Rickettsia massiliae MTU5]
Length = 361
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 138/344 (40%), Positives = 207/344 (60%), Gaps = 9/344 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQ
Sbjct: 13 SNNMKQIINPLKGND-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQ 71
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLN 118
PI+RY FDAAI+FSDILV+ A G V F EN GP + +QE + +NPN +
Sbjct: 72 PIKRYGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQFKSQEDFKYLQINPN-----D 126
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +++ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N
Sbjct: 127 KLEKVYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAE 186
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+F+++ +A++LI Q +GVDV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 187 ELLNFITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFP 246
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+
Sbjct: 247 KTPIIAFPKGAGLLYEKFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNK 306
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+++ + IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 307 EIIKEKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 350
>gi|320108939|ref|YP_004184529.1| uroporphyrinogen decarboxylase [Terriglobus saanensis SP1PR4]
gi|319927460|gb|ADV84535.1| uroporphyrinogen decarboxylase [Terriglobus saanensis SP1PR4]
Length = 366
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 178/345 (51%), Gaps = 11/345 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ + ++ P+W +RQAGRY+PEY +R K + L++C PE E+T+
Sbjct: 22 SRFVRACLRQPVDRTPVWFLRQAGRYMPEYMAVR-KHHSLLEICRNPEVASEVTITAAEH 80
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPI 123
DAAI+F+D+L+ +G + FV EGP + PI T E + L + L+Y+
Sbjct: 81 LGVDAAIIFADLLLPFTPMGLDFEFVNGEGPVVHAPIRTLEQVQALRTDRAEELSYVARA 140
Query: 124 FQSISI---LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ ++ + + +IGF GAP+T+ASYMI G +++ + + Y N A+ L
Sbjct: 141 IEKVAAHFSAPREDGDQLGIIGFIGAPFTLASYMIEGASSRNYIETKKLMYSNGAAWQLL 200
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L V EY Q+ AG DVIQIFD+ AG L ++ + ++ V+
Sbjct: 201 MQKLISVLVEYAQQQVEAGADVIQIFDSWAGALSVSDYRQFVLPITKELVQRVQAL--GV 258
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQ 299
I F +LK R T ++ +GLDW VPL +L G VQGNLDP+ L
Sbjct: 259 PVIYFGVDTASLLKTMRE-TGADVLGLDWRVPLDEGWKLAGSGCAVQGNLDPIALFAPEA 317
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ V +LD G+ IFNLGHGI P +NV+++ + VR
Sbjct: 318 LLKQRVKEVLDAAGNRNGHIFNLGHGIVPGTPVENVINVARWVRE 362
>gi|290893160|ref|ZP_06556148.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-071]
gi|290557322|gb|EFD90848.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-071]
Length = 350
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+S V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSEVKAAHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPA 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEEAERILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|183982051|ref|YP_001850342.1| uroporphyrinogen decarboxylase HemE [Mycobacterium marinum M]
gi|238056459|sp|B2HM23|DCUP_MYCMM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|183175377|gb|ACC40487.1| uroporphyrinogen decarboxylase HemE [Mycobacterium marinum M]
Length = 353
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 122/358 (34%), Positives = 185/358 (51%), Gaps = 21/358 (5%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R++ + L C+ PE
Sbjct: 1 MSTRRDLPQSPYLAAVAGRKPSRVPVWFMRQAGRSLPEYRALRRQ-HSMLAACFEPEVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QPIRRY+ DAAILFSDI+V A G ++ V + GP + P+ T ID
Sbjct: 60 EVTMQPIRRYHVDAAILFSDIVVPLRAAGVDLDIVADVGPVIAAPVRTVADVDAIKPID- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ ++ +L +L LIGF GAP+T+ASY++ GG + H + +
Sbjct: 119 -PQSIAPVLDAVELLVAEL-GDTPLIGFAGAPFTLASYLVEGGPSRHHARTKAMMLAEPA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+D++ E+L+ QI AGVD IQ+FD+ AG L ++ YA R+ + +
Sbjct: 177 TWHALMTKLTDLTIEFLLGQIRAGVDAIQVFDSWAGMLSLADYRQYALPHSARVFATLAE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTD---SNAIGLDWSVPL-SFALELQKEGPVQGNLDP 291
F G +L + +G+DW L A +Q +QGNLDP
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSEAVKPGTAKVVGVDWRTALADAAARVQPGTALQGNLDP 294
Query: 292 MRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G + A++D G+ ++FNLGHG+ PQ DP + DLV V S
Sbjct: 295 VVLLAGWPAVERAARAVVDDGRRAVDAGAAGYVFNLGHGVLPQTDPGVLTDLVSLVHS 352
>gi|311898878|dbj|BAJ31286.1| putative uroporphyrinogen decarboxylase [Kitasatospora setae
KM-6054]
Length = 359
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 115/343 (33%), Positives = 170/343 (49%), Gaps = 12/343 (3%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L + + P+W MRQAGR LPEY ++R+ LD C P+ E+TLQP+RR+
Sbjct: 22 FLRAARNEPVPHTPVWFMRQAGRSLPEYLKVREGIP-MLDSCMRPDLVKEITLQPVRRHK 80
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI FSDI+V A+G +V GP + DPI T+ L L + + I ++
Sbjct: 81 VDAAIFFSDIVVPLKAVGIDVEIKAGVGPVIADPIRTEAD--LQRLRPLEPDDMPYITEA 138
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +L +L LIGF GAP+T+ASY++ GG K + + Y + L+D L+
Sbjct: 139 VGLLVAEL-GATPLIGFAGAPFTLASYLVEGGPSKSYENTKAMMYGAPELWAGLVDRLAQ 197
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+++ +L QI AG +Q+FD+ AG L E+ + ++ AV I F
Sbjct: 198 ITSAFLKIQIEAGASAVQLFDSWAGALAPDEYRRSVLPASTKVFDAVAPY--GVPRIHFG 255
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G +L + ++ +G+DW VPL A + +QGNLDP L V+
Sbjct: 256 VNTGELLGLMGQ-AGADIVGVDWRVPLDEAANRVGPGKGLQGNLDPAVLYAPTHVVETKA 314
Query: 306 NAIL---DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L LG IFNLGHG+ P +DP + LV V
Sbjct: 315 REVLHAAQALGGSHHIFNLGHGVMPSMDPDALTRLVAFVHEAS 357
>gi|309811715|ref|ZP_07705493.1| uroporphyrinogen decarboxylase [Dermacoccus sp. Ellin185]
gi|308434327|gb|EFP58181.1| uroporphyrinogen decarboxylase [Dermacoccus sp. Ellin185]
Length = 374
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 114/346 (32%), Positives = 175/346 (50%), Gaps = 9/346 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R ++ +G + P+W MRQAGR LPEYR++R+ L+ C P+ E+TLQP+
Sbjct: 32 RNSVLIMAARGEEVPYTPVWFMRQAGRSLPEYRKVREGVG-MLESCRRPDLVTEITLQPV 90
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAAI FSDI+V A G ++ V GP + P T+ P +L + +
Sbjct: 91 RRHDVDAAIFFSDIVVPLAAAGVDLDIVAGVGPVVAQPFRTRADLERLP--ELTPDMVTD 148
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I +S+ ++ +L LIGF GAP+T+ASY+I GG K+H + Y + + +N L
Sbjct: 149 ITESVQLITAELGG-TPLIGFAGAPFTLASYLIEGGPSKNHENTKALMYGDPQLWNDLCA 207
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP-NAK 241
L+ +S +L Q AG IQ+FD+ G L ++ + ++AV +
Sbjct: 208 RLAQISGAFLRVQAAAGASAIQLFDSWVGNLPLDDYLRFVQPHSRTALAAVDDLPGIDVP 267
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQV 300
I F G G +L ++ +G+D+ V L A E + +QGNLDP L +
Sbjct: 268 KIHFGVGTGELLGAMGE-AGADVVGVDFRVSLDAARERTGNQYALQGNLDPALLFAPWEP 326
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V+ I+ IFNLGHG+ P DP V +V+ V S
Sbjct: 327 LAARVDEIVAAGRRAKGHIFNLGHGVLPSTDPDVVTRVVERVHSVS 372
>gi|282895841|ref|ZP_06303924.1| Uroporphyrinogen decarboxylase HemE [Raphidiopsis brookii D9]
gi|281199229|gb|EFA74096.1| Uroporphyrinogen decarboxylase HemE [Raphidiopsis brookii D9]
Length = 325
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 171/322 (53%), Gaps = 4/322 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR +R+K+ +F + PE +E++LQP R + D ILFSDI+
Sbjct: 1 MMRQAGRYMKAYRDLREKYPSFRERSEIPEVAIEVSLQPWRAFQPDGVILFSDIVTPLPG 60
Query: 84 LGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G ++ E +GP PI TQ+ +D L I Q + LR+++ + T++G
Sbjct: 61 MGIDMDIAEGKGPIIFSPIRTQKQVDGLHPLDPETA-LPFIRQILGALRQEVGSASTVLG 119
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y + G K + + A+ +S + LLD L++ A Y+ QI G V
Sbjct: 120 FVGAPWTLAAYAVEGKGSKTYSIIKNMAFSDSNILHQLLDKLAESIAVYIRYQIDCGAQV 179
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+Q+FD+ AG L +++ +A ++ V+R +P I G+ +L+ + +
Sbjct: 180 VQMFDSWAGQLSPQDYDIFALPYQKKVFELVKRTHPQTPLILLVTGSAGLLERMA-TSGA 238
Query: 263 NAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ + +DW+V ++ A L VQGNLDP L Q + + + + G+ I NL
Sbjct: 239 DILTIDWTVDMADARRRLGNNVKVQGNLDPGVLFGSKQFIRERILDTVRKAGNWGHILNL 298
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHG+ P+ +NV +T ++
Sbjct: 299 GHGVLPETPEENVAFFFETAKN 320
>gi|172046007|sp|A8F331|DCUP_RICM5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 138/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGND-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ A G V F EN GP + +QE + +NPN + L
Sbjct: 61 YGFDAAIIFSDILVLPHAFGWEVDFKENIGPILKQFKSQEDFKYLQINPN-----DKLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +GVDV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 176 FITEKTADHLINQAKSGVDVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDILAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|118579058|ref|YP_900308.1| uroporphyrinogen decarboxylase [Pelobacter propionicus DSM 2379]
gi|171704463|sp|A1ALN0|DCUP_PELPD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118501768|gb|ABK98250.1| uroporphyrinogen decarboxylase [Pelobacter propionicus DSM 2379]
Length = 340
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 131/340 (38%), Positives = 181/340 (53%), Gaps = 8/340 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLPEY +R + FL++C TPE +++LQP+
Sbjct: 2 NTRFLDACWGKPVDRVPVWLMRQAGRYLPEYMAVRSRC-TFLELCKTPELAAQVSLQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
DAAILFSDIL + +G + FV GP + + I + L +F
Sbjct: 61 ILGVDAAILFSDILTPVEPMGMKLDFVP--GPVFEKPVRCMADVERLRIPRMEDDLPFVF 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
I ILR++L + + LIGF GAP+T+A YM+ G KD Q + Y + L++ +
Sbjct: 119 DIIRILRRELADRVPLIGFGGAPFTLACYMVEGKGSKDFVQIKRMMYSAPDVYAALMEKI 178
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ +S EYL AQI AG IQIFDT G L ++ + R+I+ + R I
Sbjct: 179 TTMSMEYLNAQIAAGAQAIQIFDTWGGILSPSDYRTHVLPHTTRLINGLNRL--TTPVIH 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
F KGAG ML+ R + IGLDW V L+ A +L VQGNLDP L V+
Sbjct: 237 FVKGAGTMLETVREAGG-DVIGLDWHVDLATARNQLGPGVAVQGNLDPTVLFAPQAVIEQ 295
Query: 304 GVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +LD G FIFNLGHGI P V +N +V+ V+
Sbjct: 296 QVQRVLDENRGLPGFIFNLGHGILPTVPAENARFMVQCVQ 335
>gi|229084164|ref|ZP_04216453.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-44]
gi|228699200|gb|EEL51896.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-44]
Length = 335
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 110/334 (32%), Positives = 177/334 (52%), Gaps = 8/334 (2%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G P W MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL
Sbjct: 2 GEQTEYVPAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAIL 60
Query: 74 FSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRK 132
+ DI+ A+G +V GP + +PI + + I + + I +I +L
Sbjct: 61 YKDIMSPLPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEIHPE-DDVPYILDTIRLLTT 119
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
++ + + LIGF GAP+T+ASYMI GG +++ + + F Y +A+ L+D L+D+ YL
Sbjct: 120 EMLD-VPLIGFSGAPFTLASYMIEGGPSRNYHKTKAFMYAEPKAWFALMDKLADMVITYL 178
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
AQI AG +Q+FD+ G L ++ + ++ RI + VR N I GAG++
Sbjct: 179 KAQIKAGAKAVQVFDSWVGTLNVADYRVFIKPAMERIFAEVRAM--NVPMIMHGVGAGHL 236
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-V 311
+ L + +GLDW + + A VQGN+DP L+ V+ + V ILD
Sbjct: 237 ANEWNNLP-LDVVGLDWRLSIEEARGRGIHKAVQGNMDPSFLLAPWDVIEEHVKGILDQG 295
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++FNLGHG+ P+V+P + L +
Sbjct: 296 MKQPGYVFNLGHGVFPEVNPDTLKRLTAFIHDYS 329
>gi|326490599|dbj|BAJ89967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 104/342 (30%), Positives = 177/342 (51%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G + PP W+MRQAGRY+ Y+ + K+ +F + T + VE+TLQP
Sbjct: 46 EPLLIRAARGKDGLPRPPAWMMRQAGRYMASYQALSKRHPSFRERSETTDLIVEITLQPW 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ D ILFSDIL A+G E++GP + P+ T+E ID L+ L
Sbjct: 106 HAFAPDGVILFSDILTPLPAIGVPFDISESKGPVIQSPVRTEEQVRGLVPID--LDKLQF 163
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL
Sbjct: 164 VGESLKILRSEIDGKAALLGFVGAPWTIATYVVEGGMTNTYTNIKRMCHTAPNVLRGLLS 223
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ ++Y+I Q+++G IQIFD+ G L H +E ++ + +I++ ++ P+
Sbjct: 224 HLAEAISDYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIRQIVAKIKTGCPHIPL 283
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
+ + G G +L+ + + + IGLDW+V ++ + VQGN+DP L V+
Sbjct: 284 VLYINGNGGLLERMKDI-GVDVIGLDWTVDMADGRRRIGDGISVQGNVDPAYLFSPLPVL 342
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D ++ ++ G I NLGHG+ Q + V RS
Sbjct: 343 TDEIHRVVKSAGPKGHILNLGHGVLQQTPEEAVAHFFDVTRS 384
>gi|229587260|ref|YP_002845761.1| uroporphyrinogen decarboxylase [Rickettsia africae ESF-5]
gi|259645156|sp|C3PM28|DCUP_RICAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|228022310|gb|ACP54018.1| Uroporphyrinogen decarboxylase [Rickettsia africae ESF-5]
Length = 346
Score = 374 bits (961), Expect = e-102, Method: Composition-based stats.
Identities = 140/340 (41%), Positives = 208/340 (61%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNY-----KLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENRILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G D++++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADILKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLKKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL V+ FIFNLGHGI P+ +NV L++ VR
Sbjct: 296 EKTYKILQVMKGKNFIFNLGHGILPETPTENVEFLIEYVR 335
>gi|317125036|ref|YP_004099148.1| uroporphyrinogen decarboxylase [Intrasporangium calvum DSM 43043]
gi|315589124|gb|ADU48421.1| uroporphyrinogen decarboxylase [Intrasporangium calvum DSM 43043]
Length = 358
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 113/347 (32%), Positives = 175/347 (50%), Gaps = 10/347 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ R ++ + ++ P+W MRQAGR LPEYR +R+ L+ C PE E+TLQ
Sbjct: 17 SPRDSDLVRAARRQPVSRTPVWFMRQAGRSLPEYRAVREGIP-MLESCMRPELITEITLQ 75
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P+RR+ DAAI FSDI+V A+G ++ V GP + PI + L +DL ++
Sbjct: 76 PVRRHGVDAAIFFSDIVVPLKAIGIDLDIVPGVGPVVARPIRRAKD--LEQLVDLTPEHV 133
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +++ L +L LIGF GAP+T+ASY++ GG K+H + + + ++ L
Sbjct: 134 PYITEAVQQLVSEL-GATPLIGFAGAPFTLASYLVEGGPSKNHEHTKALMHGDPDLWDAL 192
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ +S +L Q AG +Q+FD+ G L ++ + R ++AV
Sbjct: 193 CARLAQISGAFLRVQAGAGASAVQLFDSWVGALSRADYTRHVQRHSASALAAVADL--EV 250
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I F G G +L+ + +G+D+ V L+ A+E L + VQGNLDP L
Sbjct: 251 PRIHFGVGTGELLRLMGE-AGAEVVGVDYRVGLTDAVERLGPDYAVQGNLDPALLFAPWD 309
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V I++ P IFNLGHG+ P VDP + + V
Sbjct: 310 ALERRVREIVEEGRHAPGHIFNLGHGVLPSVDPDVLTRVTALVHEVS 356
>gi|310793861|gb|EFQ29322.1| uroporphyrinogen decarboxylase [Glomerella graminicola M1.001]
Length = 365
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 119/355 (33%), Positives = 191/355 (53%), Gaps = 19/355 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PP W+MRQAGRYLPEY + + ++F C PE LTLQPI
Sbjct: 9 KNDLLLRAARGETVERPPCWIMRQAGRYLPEYHEAK-GNRDFFACCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
R+ DAAI+FSDILV+ ALG V V+ +GP DP++ + +L ++D+
Sbjct: 68 ERFAGLLDAAIIFSDILVVPQALGMTVEMVDKKGPHFPDPLSAPDDGQYEKVLGKSVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ RKKL + LIGFCGAPWT+ YM+ GG K Q++ + Y++
Sbjct: 128 AE-LDYVYKAITLTRKKLAGRVPLIGFCGAPWTLFCYMVEGGGTKLFMQSKRWIYRHPEE 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +++V EYL Q+ AG ++ +FD+ AG LG F+ ++ + I + + +K
Sbjct: 187 SKKLLQKIAEVCVEYLALQVKAGAQLVMVFDSWAGELGPEAFKEFSEPYLAYISANLPKK 246
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNL 289
F KGA + L + + + +GLDW + A++++ + QGN
Sbjct: 247 LAEMNLERVPMTVFPKGAWHALDSVIDI-GYDVVGLDWLQDPADAVKIRGDRRITFQGNA 305
Query: 290 DPMRLVVGNQVMIDGVNAIL--DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L ++ M V ++ G +I NLGHGITP V+P+++ + +
Sbjct: 306 DPGVLYGTHEAMTKAVEVMVKGFGGGKKGWIANLGHGITPGVNPEDLRFYLSEIH 360
>gi|145355394|ref|XP_001421947.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582186|gb|ABP00241.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 321
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ EYR + K +F + T + E+TLQP R + D ILFSDIL A
Sbjct: 1 MMRQAGRYMKEYRDVAVKHPSFRERSETTDLICEITLQPFRAFQPDGVILFSDILTPFPA 60
Query: 84 LGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
G + + +GP ++ I + E + +D L+ + + S+ ILR+++ + ++G
Sbjct: 61 FGIDFEIDDYKGPMLEKTIRSAEDLKMLHEVD--LSKVEFVADSLKILRQEVGDEAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+ +Y++ G + + + N + LL ++D A Y+ QI AG V
Sbjct: 119 FVGAPWTLCTYIVEGQSTSTYKTIKSMCFNNPEVLHKLLSAVADALAVYVGFQIDAGAQV 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
IQ+FD+ G L H +E ++ + R++ V + +P +A G+G +L+ L
Sbjct: 179 IQVFDSWGGQLPPHMWEEWSKPYIERVVRKVNQTHPGVPITMYANGSGGLLERMATLP-V 237
Query: 263 NAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
+ IGLDW++ + + VQGN+DP+ L G + V + G I NLG
Sbjct: 238 DTIGLDWTIDMEDGRRRVGDKAVQGNVDPVVLFAGEDAIEKAVRDVCRKAGPTGHILNLG 297
Query: 323 HGITPQVDPKNVLDLVK 339
HG+ ++V
Sbjct: 298 HGVLVGTPEESVKHFFD 314
>gi|95113918|gb|ABF55509.1| HemE [Wolbachia endosymbiont of Drosophila mauritiana]
Length = 338
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 139/345 (40%), Positives = 196/345 (56%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K KI ++ Q PIWLMRQAGR LPEYR+ + NF+++CY+ + ELT
Sbjct: 1 MKRSKAKIARIISQNESDEKVPIWLMRQAGRSLPEYRKAVENMNNFMEICYSTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI R++ DAAI+FSDIL+IAD LG NV F+ GP + PI + + I+ +
Sbjct: 61 LQPITRFDMDAAIIFSDILIIADILGCNVNFIRGVGPIIRPIESAKDLKSLQGIE---SN 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTV SY+I GG K + F A
Sbjct: 118 TLPILNAIKEVRSQLPEEKSLIGFAGGPWTVGSYIIEGGSSKTFSKVLNFC---PLALEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ ++PN
Sbjct: 175 IIKKITEATIIYLIKQIEFGADVIQLFDSNAGVLKGKLFERYIIKPTKEIVSAIKSRFPN 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + A + +Y T +A+ +D++VP+ +A E K P+QGNL+P L
Sbjct: 235 FPIIGFPRSAENLYTDYCEQTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKS 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+ I+D PFIFNLGHG+ P +NV LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENVAALVDLVRNY 338
>gi|238651132|ref|YP_002916990.1| uroporphyrinogen decarboxylase [Rickettsia peacockii str. Rustic]
gi|259645157|sp|C4K2Z1|DCUP_RICPU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238625230|gb|ACR47936.1| uroporphyrinogen decarboxylase [Rickettsia peacockii str. Rustic]
Length = 346
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 139/340 (40%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNY-----KLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +I+ V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIVLKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL + FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQAMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|303273526|ref|XP_003056124.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226462208|gb|EEH59500.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 391
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 105/341 (30%), Positives = 165/341 (48%), Gaps = 4/341 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L V +G PP+WLMRQAGRY+ E+R+ K+ F T + +EL+LQP R
Sbjct: 48 DPLLLRVARGEQCERPPVWLMRQAGRYMAEFREYSDKYG-FRHRSETADIAIELSLQPWR 106
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ D I+FSDIL ALG V+ +GP + P+ + +D L I
Sbjct: 107 AFKPDGVIMFSDILTPLPALGVEFDVVKGKGPLISSPVRSLHDVKSLRTLDDPDGSLPFI 166
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ +S LR ++ TL+GF G PWT+A+Y + G + + Q+ + L
Sbjct: 167 REILSSLRSEIAGETTLLGFIGTPWTLAAYSVEGRSDRHLINTKQMMTQDPSLLHMYLAH 226
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D A Y QI G V+Q+FD+ A L +F ++ R+I+ V+ KYP+ I
Sbjct: 227 LADALAVYACHQIDCGAQVVQLFDSWAHHLSPLQFAEFSMPYSERVIAKVKAKYPDTPLI 286
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
A G L+ + + ++ +GLDW+ + A L +QGN+DPM L + +
Sbjct: 287 YHANGGAGKLELM-KGSSADVLGLDWNTSMKDARRILGSHRVIQGNIDPMYLFASEERIR 345
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V+ + G G I N+GHG+ ++V R
Sbjct: 346 EEVSNNVADAGKGNHILNVGHGVIQGTPEQSVAVFCDAARG 386
>gi|145588217|ref|YP_001154814.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046623|gb|ABP33250.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 369
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 125/366 (34%), Positives = 188/366 (51%), Gaps = 27/366 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ G ++ P+WLMRQAGRYLPEY R + +FL + P Y E+TLQP+
Sbjct: 4 NDRFLKACLGEAVDQTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLD 63
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAILFSDIL I DA+G ++F EGP + P+ T++ D ++ L +
Sbjct: 64 RYPLDAAILFSDILTIPDAMGLGLKFTAGEGPSFEHPLRTEDDVKKLRVAD--MDQLKYV 121
Query: 124 FQSISILRKKL----PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
F+++S +RK L + LIGF G+PWT+A YMI G D + +
Sbjct: 122 FEAVSEIRKALIQYGKQRVPLIGFSGSPWTLACYMIDGSSADDFRHAKTMMFSRPDLMQQ 181
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+LD A YLI Q+ AG + IFDT G L + ++ + ++ ++I+ + R+Y
Sbjct: 182 ILDINIQSVANYLIEQVKAGAQALMIFDTWGGMLPDGWYQRVSLAAMQKVIALLPREYEG 241
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMR 293
I F KG L + ++ ++ I +DW++ LS A + L K +QGNLDP+
Sbjct: 242 QKIPVIMFTKGGAIWLNDMAQI-GADVIAMDWTMSLSRARKQLLALNKPLALQGNLDPLI 300
Query: 294 LVVGNQVMIDGVNAILDVLGSGP-----------FIFNLGHGITPQVDPKNVLDLVKTV- 341
L + + + +LD L S P IFNLGHGI+ P++V L + V
Sbjct: 301 LFSEPEQIARQASLLLDDLASAPPLKAGLHSLDGHIFNLGHGISQFTPPESVTALSQAVI 360
Query: 342 -RSEKI 346
S +
Sbjct: 361 KHSRSL 366
>gi|86740040|ref|YP_480440.1| uroporphyrinogen decarboxylase [Frankia sp. CcI3]
gi|123724052|sp|Q2JDD1|DCUP_FRASC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|86566902|gb|ABD10711.1| uroporphyrinogen decarboxylase [Frankia sp. CcI3]
Length = 369
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 114/340 (33%), Positives = 171/340 (50%), Gaps = 11/340 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
L + P+W MRQAGR LPEYR +R LD C E E+TLQP+RR+
Sbjct: 37 PFLRACRREHPGTTPVWFMRQAGRVLPEYRALRAGVA-MLDSCRDAEMITEITLQPVRRF 95
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI+V A+G ++ V GP + +P+ + L L + + +
Sbjct: 96 RPDAAIFFSDIVVPLVAIGLDIDIVAGIGPVVAEPVR--DAVGLAALRALEPDDVPYVAD 153
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ L +L LIGF GAP+T+ASY+I GG +DH + + Y + ++ LL L+
Sbjct: 154 AVRFLLAEL-GSTPLIGFAGAPFTLASYLIEGGPSRDHARTKALMYSEPKLWHALLARLA 212
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ +L Q+ AGVD +Q+FD+ AG L E ++ Y A R+++A + I F
Sbjct: 213 DITTAFLRVQVDAGVDALQLFDSWAGALDEADYRRYVAPHSARVLAAFAGE---VPRIHF 269
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L + ++ +G+DW VPL A + VQGNLDP + V+
Sbjct: 270 GVNTGELLAAMGQ-AGADVVGVDWRVPLDEAARRIGPGHAVQGNLDPTAVFAPEPVLAAK 328
Query: 305 VNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + +FNLGHG+ PQ DP + + V
Sbjct: 329 VRDVCARGAEAEGHVFNLGHGVLPQTDPGVLAHVADLVHG 368
>gi|46908446|ref|YP_014835.1| uroporphyrinogen decarboxylase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093737|ref|ZP_00231488.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 4b
H7858]
gi|254825224|ref|ZP_05230225.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-194]
gi|254853336|ref|ZP_05242684.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-503]
gi|254931675|ref|ZP_05265034.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HPB2262]
gi|254992116|ref|ZP_05274306.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-064]
gi|300763978|ref|ZP_07073974.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N1-017]
gi|67460305|sp|Q71XF3|DCUP_LISMF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|46881717|gb|AAT05012.1| uroporphyrinogen decarboxylase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47017894|gb|EAL08676.1| uroporphyrinogen decarboxylase [Listeria monocytogenes str. 4b
H7858]
gi|258606700|gb|EEW19308.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL R2-503]
gi|293583230|gb|EFF95262.1| uroporphyrinogen decarboxylase [Listeria monocytogenes HPB2262]
gi|293594470|gb|EFG02231.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-194]
gi|300515319|gb|EFK42370.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL N1-017]
gi|328465795|gb|EGF36983.1| uroporphyrinogen decarboxylase [Listeria monocytogenes 1816]
gi|332312664|gb|EGJ25759.1| Uroporphyrinogen decarboxylase [Listeria monocytogenes str. Scott
A]
Length = 353
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 101/347 (29%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI + + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTMFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|313607390|gb|EFR83774.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL F2-208]
Length = 350
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLAIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWT 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+S V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAKYIRPVIEMIVSDVKAAHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPA 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEEADRILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|15893297|ref|NP_361011.1| uroporphyrinogen decarboxylase [Rickettsia conorii str. Malish 7]
gi|34581040|ref|ZP_00142520.1| uroporphyrinogen decarboxylase [Rickettsia sibirica 246]
gi|23814003|sp|Q92FV3|DCUP_RICCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|15620519|gb|AAL03912.1| uroporphyrinogen decarboxylase [Rickettsia conorii str. Malish 7]
gi|28262425|gb|EAA25929.1| uroporphyrinogen decarboxylase [Rickettsia sibirica 246]
Length = 346
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 141/340 (41%), Positives = 207/340 (60%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++I+ L+GN N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQIINPLKGNN-NKVPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVSKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL---LNPNIDLFLNYLLP 122
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + +NPN L
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENIGPILKQFKSQEDFKYLQINPNY-----KLEK 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+++ I ++K+LP+ I+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+
Sbjct: 116 VYEIIKKVKKELPSPISLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAEELLN 175
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
F+++ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P
Sbjct: 176 FITEKTADHLINQAKSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPI 235
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I+F KGAG + + + + + + +D VPL E + VQGNLDP+ L+ +++
Sbjct: 236 IAFPKGAGLLYEKFIKEVPIDVLAVDQMVPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIK 295
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ IL V+ FIFNLGHGI P+ +NV L + VR
Sbjct: 296 EKTYKILQVMKGKNFIFNLGHGILPETPTENVEFLTEYVR 335
>gi|226355380|ref|YP_002785120.1| uroporphyrinogen decarboxylase [Deinococcus deserti VCD115]
gi|226317370|gb|ACO45366.1| putative uroporphyrinogen decarboxylase [Deinococcus deserti
VCD115]
Length = 362
Score = 373 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 179/344 (52%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ L+G + P+W MRQAGRY+PEYR +R ++ LD TPE E+TLQPI+
Sbjct: 21 DSAFLKALRGEPASHTPVWFMRQAGRYMPEYRALRAG-RSMLDCIRTPELAAEITLQPIK 79
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILF+DIL +G ++ FV GP++ +P++T + +
Sbjct: 80 AMPLDAAILFNDILTPLPTMGLDLDFVGGVGPQIANPVSTTADVD-RLGVPSTAETMPYT 138
Query: 124 FQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+SI +L +L I LIGF GAP+T+ASY I G +++ + + F Y A+ L+
Sbjct: 139 AESIRLLVPELNARGIPLIGFVGAPFTLASYAIEGKGSRNYERTKRFMYAEPAAWERLMG 198
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ A+YL Q+ AG +QIFD+ G L +++ + + R+I V++
Sbjct: 199 KFEAILADYLTEQVKAGASAVQIFDSWVGALSIYDYRTFVKPATSRLIERVKKL--GVPV 256
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVM 301
I F G ++L + L +N +G DW +PL A +L + G +QGNLDP+ L + +
Sbjct: 257 IYFGTGTTHLLPDMASL-GTNIVGADWRLPLDQAWDLLESGQGIQGNLDPLLLQAPWREL 315
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ IL + G +FN+GHGI P+ V L V +
Sbjct: 316 RHQTDRILGEAAGRPGHVFNVGHGILPETPQAMVHRLTDYVHEQ 359
>gi|315283314|ref|ZP_07871530.1| uroporphyrinogen decarboxylase [Listeria marthii FSL S4-120]
gi|313613035|gb|EFR86961.1| uroporphyrinogen decarboxylase [Listeria marthii FSL S4-120]
Length = 352
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 103/347 (29%), Positives = 179/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + I+ P+W MRQAGR PEYR++++++ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQIDRIPVWYMRQAGRSQPEYRKLKEQY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFQPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDML-EVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YL+AQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTASYLVAQINAGASAVQLFDSWVGALSRADYATYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW L+ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETLTTARQKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + FIFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEEAERILQEGVLKPGFIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|323358309|ref|YP_004224705.1| uroporphyrinogen-III decarboxylase [Microbacterium testaceum
StLB037]
gi|323274680|dbj|BAJ74825.1| uroporphyrinogen-III decarboxylase [Microbacterium testaceum
StLB037]
Length = 354
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 175/349 (50%), Gaps = 11/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +L L+G+ P+W MRQAGR LPEYR++R + LD C TP E+TL
Sbjct: 1 MATPDAPLLRALRGDRPERQPVWFMRQAGRSLPEYRELRVGTR-MLDACLTPHLAAEITL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID--LFL 117
QPIRR++ DAAI FSDI+V G +V GP DP+ T + ID
Sbjct: 60 QPIRRHDVDAAIFFSDIVVPLRLAGVDVVIEPGRGPVFADPVRTADDVARITAIDPADVA 119
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
P+ ++ ++ +L + + LIGF GAP+T+A+Y++ GG K+H + R + + ++
Sbjct: 120 AAAEPVREAARLVTAELDDAVPLIGFAGAPFTLAAYLVEGGPSKEHLRARGMMHADPESW 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ L +LS VS +L AQI G +Q+FD+ AG L F + A + +
Sbjct: 180 HRLAGWLSRVSRAFLDAQIEGGAQAVQLFDSWAGSLSPATFREFIAPHSRAALEGI---- 235
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I F G G L + R ++A+G+DW +PL A + + +QGNLDP L
Sbjct: 236 -EVPRIHFGVGTGAFLDDMRLSGLADAVGVDWRMPLDEAAALVGPDVTLQGNLDPALLGA 294
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ V+ +L + I NLGHG+ P DP + +V
Sbjct: 295 PWPVLAAHVDDVLARGRAARAHILNLGHGVPPDTDPDVLTRIVAHAHGH 343
>gi|296171914|ref|ZP_06852978.1| uroporphyrinogen decarboxylase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295893913|gb|EFG73684.1| uroporphyrinogen decarboxylase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 353
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 116/358 (32%), Positives = 180/358 (50%), Gaps = 21/358 (5%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G P+W MRQAGR LPEYR +R + + L C+ E
Sbjct: 1 MSTRRDLPASPYLAAVTGRKPARIPVWFMRQAGRSLPEYRALRAQ-SDMLAACFDAELVC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V G ++ V GP + P+ T +D
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLLGAGIDLDIVAGVGPVIASPVRTAADVDAMKPLDR 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ ++++L L + LIGF GAP+T+ASY+I GG + H + + +
Sbjct: 120 --QRIQPVSDAVTLLVAAL-GEVPLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPG 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L++ L+D++ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 177 SWHALMEKLTDITVGFLRAQLEAGVDAIQVFDSWAGALSLADYRAYVQPHSARVFGALAE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
F G +L + +G+DW L+ A + +QGNLDP
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSAALQPATATVVGVDWRTSLADAATRVAPGTALQGNLDP 294
Query: 292 MRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G + A++D G+G +FNLGHG+ P +P + DLV V S
Sbjct: 295 VVLMAGWPAVERAARAVVDDGRRAVDAGAGGHVFNLGHGVLPDTEPGVLTDLVSLVHS 352
>gi|326802531|ref|YP_004320350.1| uroporphyrinogen decarboxylase [Sphingobacterium sp. 21]
gi|326553295|gb|ADZ81680.1| Uroporphyrinogen decarboxylase [Sphingobacterium sp. 21]
Length = 345
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 118/351 (33%), Positives = 184/351 (52%), Gaps = 13/351 (3%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + + PP+W+MRQAGR++ EY I+ K+ +FL+MC TPE ++
Sbjct: 1 MTTAIKDSLFIRAAFSQPTERPPVWMMRQAGRFMKEYWDIKNKY-SFLEMCKTPEIAADV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLF 116
T+ P+ DAAILFSDILV A+A+G + F + GP+ +P+ + +I L ++
Sbjct: 60 TMLPVDLLGIDAAILFSDILVTAEAMGGELSFTQGVGPKFANPVRNESDIDALQTDVADK 119
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L Y + +I +++++L I LIGF GAP+TV SY+I GG KD ++F
Sbjct: 120 LQY---VADAIQVIQQRLNGAIPLIGFAGAPFTVLSYLIEGGSSKDFKLTKLFLNNQPEL 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LL ++DV+ YL QI AGV+ +Q+FD+ A L ++ ++ + II+ + RK
Sbjct: 177 AHKLLKKIADVTVTYLNMQIKAGVNALQLFDSWALALSWDDYSEFSHQYNAGIIAQLDRK 236
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLV 295
+ ISF KG+ + I +DW+ L +G VQGNLDP L
Sbjct: 237 --DIPVISFCKGSSVFAPLMAE-AKPDVISVDWNADLKQIKNNLPKGIAVQGNLDPFILY 293
Query: 296 VGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ + + + + G FIFNLGHGI P + NV + V+ +
Sbjct: 294 ADKAVIKKKILHLFERMRGEEGFIFNLGHGIMPDIPFDNVKYAIDVVKEFR 344
>gi|313632257|gb|EFR99316.1| uroporphyrinogen decarboxylase [Listeria seeligeri FSL N1-067]
gi|313636761|gb|EFS02413.1| uroporphyrinogen decarboxylase [Listeria seeligeri FSL S4-171]
Length = 350
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L + +N P+W MRQAGR PEYR+++ K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLRAARKESVNRIPVWYMRQAGRSQPEYRKLKAKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIKTYQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLTDDML-EVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPDVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A+YLIAQI+AG +Q+FD+ G L ++ Y + +I+ ++ +P
Sbjct: 178 MLMEKLGRMTADYLIAQINAGASAVQLFDSWVGALSRPDYATYIRPVIEKIVLEIKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GAG++L + + + +G+DW L+ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGAGHLLAEWETMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEETERILQEGILKPGYIFNLGHGVFPEVSPEMLKKLTAYIHDRS 343
>gi|289435553|ref|YP_003465425.1| uroporphyrinogen decarboxylase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289171797|emb|CBH28343.1| uroporphyrinogen decarboxylase [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 350
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L + +N P+W MRQAGR PEYR+++ K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLRAARKESVNRIPVWYMRQAGRSQPEYRKLKAKY-SLFEITHQPELCAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIKTYQDVEKLTVFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLTDDML-EVPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPDVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A+YLIAQI+AG +Q+FD+ G L ++ Y + +II ++ +P
Sbjct: 178 MLMEKLGRMTADYLIAQINAGASAVQLFDSWVGALSRPDYATYIRPVIEKIILEIKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GAG++L + + + +G+DW L+ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGAGHLLAEWETMP-LDVVGVDWRETLTDARKKVPSKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLEETERILQEGILKPGYIFNLGHGVFPEVSPEMLKKLTAYIHDRS 343
>gi|91206244|ref|YP_538599.1| uroporphyrinogen decarboxylase [Rickettsia bellii RML369-C]
gi|122425099|sp|Q1RGK4|DCUP_RICBR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|91069788|gb|ABE05510.1| Uroporphyrinogen decarboxylase [Rickettsia bellii RML369-C]
Length = 340
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 132/327 (40%), Positives = 202/327 (61%), Gaps = 2/327 (0%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PPIWLMRQAGRYL EY +RK+ KNFL+ CY + E+TLQPI+R+ FDAAI+FSDI
Sbjct: 13 NKPPIWLMRQAGRYLSEYMAVRKEVKNFLEFCYDVDKATEVTLQPIKRFGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
LV+ ALG V F EN GP + ++E + D + L +++ + +RK+LP
Sbjct: 73 LVLPHALGWEVDFKENIGPLLKQFKSKEDFKYL--QDNSNDKLEKVYEIVKKVRKELPKS 130
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+LIGF G+PWTV +YM+ G +D ++ F Y+N LL+F+++ + +LI QI
Sbjct: 131 TSLIGFAGSPWTVMTYMLEGKGKQDFRVSKKFIYENKDLAKELLNFITEKTIHHLINQIK 190
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G ++I+IFD+ AG L E EF+ + +II +++ +P+ I+F KGAG + + +
Sbjct: 191 SGANIIKIFDSWAGILPEEEFKKFVIEPTKKIIKSIKGYFPDIPIITFPKGAGLLYEKFL 250
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
++ I +D +PL + VQGNLDP+ L+ +++ + ++ IL ++ + F
Sbjct: 251 EEVPTDIIAIDPLIPLEKMKLWSNKVTVQGNLDPVILLTNKKIIKEKIHKILSIMENKNF 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
IFNLGHGI P+ P+NV LVK +R
Sbjct: 311 IFNLGHGILPETPPENVEFLVKCIREY 337
>gi|312215395|emb|CBX95347.1| similar to uroporphyrinogen decarboxylase [Leptosphaeria maculans]
Length = 349
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 122/336 (36%), Positives = 178/336 (52%), Gaps = 17/336 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PPIW+MRQAGRYLPEY + + K +F + C +PE LTLQPI
Sbjct: 9 KNDLILRTARGEKVERPPIWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP DP+ T E ++ ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPDPLQTPEDKQYKEVLERKVDVA 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 128 ESLDYVYKAITLTRQKLAGRVPLIGFCGAPWTLLCYMVEGGGSKLFIQTKTWVYKYPEES 187
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+++A + I + +
Sbjct: 188 KALLQKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPTSFKSFALPYLNYIADNLPARL 247
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
FAKGA Y L + ++ N IGLDW + A +L K +QGN D
Sbjct: 248 KSKGLEPVPMTVFAKGAWYALPDLFE-SNYNTIGLDWLHDPAEAYKLARAKGKVLQGNAD 306
Query: 291 PMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHG 324
P L + + V ++ G +I NLGHG
Sbjct: 307 PGVLYGTQEAITRVVEEMVAGFDGGKQGWIANLGHG 342
>gi|149185260|ref|ZP_01863577.1| uroporphyrinogen decarboxylase [Erythrobacter sp. SD-21]
gi|148831371|gb|EDL49805.1| uroporphyrinogen decarboxylase [Erythrobacter sp. SD-21]
Length = 320
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 123/322 (38%), Positives = 192/322 (59%), Gaps = 4/322 (1%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR++R + FL M Y E E+TLQPI R+ FD AILFSDIL++ AL
Sbjct: 1 MRQAGRYLPEYRELRAQKGGFLAMAYDSEAACEITLQPIDRFGFDGAILFSDILIVPHAL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G+N+ F+ EGP++ P + + ++ PI++++ + R++LP +T++GF
Sbjct: 61 GQNLEFLAGEGPKLSP---RLVDASLESLTRAPERYEPIYETVRLCRQRLPEGVTMLGFA 117
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
G+PWTVA+YM++G +D + R AY++ ++D +++ + YL QI AG + +Q
Sbjct: 118 GSPWTVATYMVAGEGSRDQHEARALAYRDPGELQAIIDTIAEQTITYLSGQIEAGAEAVQ 177
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
+FD+ AG L +EFE + RI++A+ +P+ I F KG+G L Y R T A
Sbjct: 178 LFDSWAGSLAPNEFERWVIAPNARIVAALAELHPDTPVIGFPKGSGEKLPVYARETGVKA 237
Query: 265 IGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
+G+D ++ ++ A +L VQGNLDP+ L+ G+ + V IL+ P +FNLGH
Sbjct: 238 VGVDETLDPAWVARQLPAGMAVQGNLDPLLLLAGSDQLEKRVQTILEAFADRPHVFNLGH 297
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
GI + +V L+ VR +
Sbjct: 298 GIDRRTPIAHVERLIAAVRGWQ 319
>gi|226224820|ref|YP_002758927.1| uroporphyrinogen III decarboxylase [Listeria monocytogenes
Clip81459]
gi|259645152|sp|C1KXG7|DCUP_LISMC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|225877282|emb|CAS05996.1| Putative uroporphyrinogen III decarboxylase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 353
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 101/347 (29%), Positives = 180/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI + + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTMFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINAGTSAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW ++ A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 297 KCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 343
>gi|239946628|ref|ZP_04698381.1| uroporphyrinogen decarboxylase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|241563466|ref|XP_002401715.1| uroporphyrinogen decarboxylase, putative [Ixodes scapularis]
gi|215501907|gb|EEC11401.1| uroporphyrinogen decarboxylase, putative [Ixodes scapularis]
gi|239920904|gb|EER20928.1| uroporphyrinogen decarboxylase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 346
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 138/337 (40%), Positives = 203/337 (60%), Gaps = 3/337 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++IL L+GN N PIW MRQAGRYL EY+++R+ KNFLD CY E+TLQPI+R
Sbjct: 2 KQILNPLKGNS-NKIPIWFMRQAGRYLSEYKKVRETTKNFLDFCYDVNKATEVTLQPIKR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y FDAAI+FSDILV+ ALG V F EN GP + +QE + N L I++
Sbjct: 61 YGFDAAIIFSDILVLPHALGWEVDFKENVGPILKQFKSQEDFKYL--QSNPNNKLEKIYE 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F++
Sbjct: 119 IIKKVKKELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFIYENKILAKELLNFIT 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ +A++LI Q +G DV+++FD+ +G L E EF + +II V+ +P I+F
Sbjct: 179 EKTADHLINQARSGADVLKLFDSWSGVLAEEEFTEFVIEPTKKIILKVKEVFPKTPVIAF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + + + + + + +D +PL E + VQGNLDP+ L+ +++ +
Sbjct: 239 PKGAGLLYEKFIKEVPIDILAVDQMIPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIKEKA 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL V+ FIFNLGHGI P+ P+N+ L + VR
Sbjct: 299 YKILQVMKGKNFIFNLGHGILPETPPENIEFLTEYVR 335
>gi|95113915|gb|ABF55507.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
gi|95113921|gb|ABF55511.1| HemE [Wolbachia endosymbiont of Drosophila simulans]
Length = 338
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 138/345 (40%), Positives = 196/345 (56%), Gaps = 8/345 (2%)
Query: 1 MNERKQKILEVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M K KI ++ Q PIWLMRQAGR LPEYR+ + NF+++CY+ + ELT
Sbjct: 1 MKRSKAKIARIISQNESDEKVPIWLMRQAGRSLPEYRKAVENMNNFMEICYSTDLVTELT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI R++ DAAI+FSDIL+IAD LG NV F+ GP + PI + + I+ +
Sbjct: 61 LQPITRFDMDAAIIFSDILIIADILGCNVNFIRGVGPIIRPIESAKDLKSLQGIE---SN 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
LPI +I +R +LP +LIGF G PWTV SY+I GG K + F A
Sbjct: 118 TLPILNAIKEVRSQLPEEKSLIGFAGGPWTVGSYIIEGGSSKTFSKVLNFC---PLALEE 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++ +++ + YLI QI G DVIQ+FD++AG L FE Y + I+SA++ ++PN
Sbjct: 175 IIKKITEATIIYLIKQIEFGADVIQLFDSNAGVLKGKLFERYIIKPTKEIVSAIKSRFPN 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F + A + +Y T +A+ +D++VP+ +A E K P+QGNL+P L
Sbjct: 235 FPIIGFPRSAENLYTDYCEQTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKS 293
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+ I+D PFIFNLGHG+ P +N+ LV VR+
Sbjct: 294 EAIEEAKRIIDCFRGLPFIFNLGHGVLPDTPVENIAALVDLVRNY 338
>gi|221236815|ref|YP_002519252.1| uroporphyrinogen decarboxylase [Caulobacter crescentus NA1000]
gi|220965988|gb|ACL97344.1| uroporphyrinogen decarboxylase [Caulobacter crescentus NA1000]
Length = 363
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 125/344 (36%), Positives = 187/344 (54%), Gaps = 3/344 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP
Sbjct: 21 KQTPKFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQP 80
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+RR+ FDA+I+F+DIL+I ALG+ V F EGP++ + + L
Sbjct: 81 MRRFPFDASIVFADILLIPGALGQKVWFEAGEGPKLG--DMPSVESMAEKAGEAGKALSL 138
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+
Sbjct: 139 VGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSS-DRSGARTFAYQNPETLDALIQ 197
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L D + +YL Q+ AG +++F++ A L E F+ + RII +R +
Sbjct: 198 VLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPI 257
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F +GAG ++++Y T + LD S +QK +QG LDP+ L G ++
Sbjct: 258 IGFPRGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDPLLLRAGGDALL 317
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 318 KRVDEMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 361
>gi|16127993|ref|NP_422557.1| uroporphyrinogen decarboxylase [Caulobacter crescentus CB15]
gi|239977226|sp|P0CAX3|DCUP_CAUCR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|239977334|sp|B8GW41|DCUP_CAUCN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13425539|gb|AAK25725.1| uroporphyrinogen decarboxylase [Caulobacter crescentus CB15]
Length = 351
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 125/344 (36%), Positives = 187/344 (54%), Gaps = 3/344 (0%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP
Sbjct: 9 KQTPKFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQP 68
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+RR+ FDA+I+F+DIL+I ALG+ V F EGP++ + + L
Sbjct: 69 MRRFPFDASIVFADILLIPGALGQKVWFEAGEGPKLG--DMPSVESMAEKAGEAGKALSL 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+
Sbjct: 127 VGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSS-DRSGARTFAYQNPETLDALIQ 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L D + +YL Q+ AG +++F++ A L E F+ + RII +R +
Sbjct: 186 VLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFDRLVTQPHIRIIEGLRARGVTVPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F +GAG ++++Y T + LD S +QK +QG LDP+ L G ++
Sbjct: 246 IGFPRGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDPLLLRAGGDALL 305
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ +L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 306 KRVDEMLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 349
>gi|240169727|ref|ZP_04748386.1| uroporphyrinogen decarboxylase [Mycobacterium kansasii ATCC 12478]
Length = 357
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 177/349 (50%), Gaps = 17/349 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L + G + P+W MRQAGR LPEYR +R++ + LD C P+ E+TLQP+RR
Sbjct: 14 SPYLAAVAGRKPSRVPVWFMRQAGRSLPEYRALRQQ-HSMLDACLEPDVACEITLQPVRR 72
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
Y DAAILFSDI+V A G + V + GP + P+ T +D + P+
Sbjct: 73 YGVDAAILFSDIVVPLRAAGVELDIVADVGPVIAHPVRTATDIEHIKPLD--PQAIQPVL 130
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ +L L + LIGF GAP+T+ASY+I GG + + + + +++ L+ L
Sbjct: 131 QTVELLVAAL-GDVPLIGFAGAPFTLASYLIEGGPSRHYIRTKAMMLAEPASWHALMSKL 189
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D++ +L QI +GVD IQ+FD+ AG L ++ Y R+ +
Sbjct: 190 TDLTIAFLRGQIDSGVDAIQVFDSWAGMLSLSDYRQYVLPHSARVFGTLAEH--GVPMTH 247
Query: 245 FAKGAGYMLKNYRR---LTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQV 300
F G +L + +G+DW L A +Q +QGNLDP+ L+ G V
Sbjct: 248 FGVGTAELLGAMSEALQAGAATVVGVDWRTALADAAARVQPGTALQGNLDPVLLLAGWPV 307
Query: 301 MIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ A++D G+ +FNLGHG+ PQ DP + +LV V S
Sbjct: 308 VERAARAVVDDGRRAVDAGAAGHVFNLGHGVLPQTDPGVLTELVSLVHS 356
>gi|312888378|ref|ZP_07747954.1| uroporphyrinogen decarboxylase [Mucilaginibacter paludis DSM 18603]
gi|311299212|gb|EFQ76305.1| uroporphyrinogen decarboxylase [Mucilaginibacter paludis DSM 18603]
Length = 340
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 117/344 (34%), Positives = 191/344 (55%), Gaps = 9/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ PP+W+MRQAGR++ EY I+ K+ +FL+MC TPE ++T+ P+
Sbjct: 2 KDSLFIKAAFSEKTERPPVWMMRQAGRFMKEYWDIKNKY-SFLEMCKTPELAADVTMLPV 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ DAAILFSDILV +A+G ++ F +N GPR +P+ TQ ++ + L
Sbjct: 61 NLLDIDAAILFSDILVTGEAMGGDLSFTQNVGPRFANPVRTQAD--IDNLQVEVGDKLQY 118
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +I +++++L I LIGF GAP+TV SY++ GG KD ++ + + LL
Sbjct: 119 VADAIKVIQQRLNGKIPLIGFAGAPFTVMSYLVEGGSSKDFKLTKLMLHNEPAMAHQLLS 178
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ V+A+YL QI AGV+ +QIFD+ A L +++ ++ R + IIS + RK +
Sbjct: 179 KIAQVTADYLNLQIAAGVNAVQIFDSWAQALAWDDYKEFSHRYIVEIISKLNRK--DIPV 236
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVM 301
ISF KG+ + + +DW+V L L + VQGNLDP L +V+
Sbjct: 237 ISFCKGSSVFAPLMAE-AKPDVVSIDWNVDLLDMKKRLPQGVAVQGNLDPHILYADKKVI 295
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
D ++ + + + P ++FNLGHGI P + NV V+ ++
Sbjct: 296 KDRIHKLFERMRDEPGYVFNLGHGIMPDIPFDNVKYAVEVIKEW 339
>gi|284990409|ref|YP_003408963.1| uroporphyrinogen decarboxylase [Geodermatophilus obscurus DSM
43160]
gi|284063654|gb|ADB74592.1| uroporphyrinogen decarboxylase [Geodermatophilus obscurus DSM
43160]
Length = 355
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 10/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ +G + P+W MRQAGR LPEYR +R + LD C P+ E+TLQP+RR+
Sbjct: 20 LVRAARGLPVRRTPVWFMRQAGRSLPEYRALRAGTR-MLDACQDPDLVTEITLQPVRRHG 78
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDI++ G ++ GP + P+ + P ++ + L + +
Sbjct: 79 VDAAILFSDIVLPLVVAGVDIDIKPGVGPVIASPVRSVADVDALPPLE--PDRLAFLATA 136
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ L +L LIGF GAP+T+A+Y+I GG K+H + + F Y A+ LLD L+
Sbjct: 137 VRRLVAELGP-TPLIGFAGAPFTLATYLIEGGPSKEHARTKAFMYAEPEAWGRLLDRLAV 195
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+A +L Q+ AG +Q+FD+ AG L ++ ++ A+ + + + F
Sbjct: 196 SAATFLTTQVDAGASAVQLFDSWAGVLSAADYAERVLPHSRAVLDALGDR--DVPKVHFG 253
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L ++ +G+DW VPL A + +QGNLDP L+ + V
Sbjct: 254 VGTGELLPLIGD-AGADVVGVDWRVPLDEAARRVGPGRSLQGNLDPAVLLADRATVDREV 312
Query: 306 NAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ + +FNLGHG+ P DP + +V V
Sbjct: 313 RRVVAQGRAARGHVFNLGHGVLPDTDPGVLTSVVDLVHE 351
>gi|313617652|gb|EFR89941.1| uroporphyrinogen decarboxylase [Listeria innocua FSL S4-378]
Length = 350
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 102/347 (29%), Positives = 179/347 (51%), Gaps = 6/347 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRTFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q + F Y+ +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWA 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L++ L ++A YLIAQI+ G +Q+FD+ G L ++ Y + I+ V+ +P
Sbjct: 178 ILMEKLGRMTANYLIAQINVGASAVQLFDSWVGALSRADYAQYIRPVIEMIVREVKAVHP 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I A GA ++L + + + +G+DW + A + +QGNLDP L+
Sbjct: 238 TTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETIITARQKVPTKAIQGNLDPSTLLAPE 296
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + + + +IFNLGHG+ P+V P+ + L K +
Sbjct: 297 KCIAETERILQEGILEPGYIFNLGHGVFPEVPPEMLKKLTKYIHERS 343
>gi|116624284|ref|YP_826440.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
gi|122253030|sp|Q01W10|DCUP_SOLUE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116227446|gb|ABJ86155.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
Length = 345
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 105/343 (30%), Positives = 181/343 (52%), Gaps = 9/343 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L+ + + P+W MRQAGRY+ +YRQIR+K L++C P+ +TLQPI
Sbjct: 8 SRFLDACRRRPTDVRPVWFMRQAGRYMKQYRQIREKHG-ILEICKRPDLAATVTLQPIEV 66
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAI+F+D+L+ + +G +++ + EGP + +P+ T + ++ + L +
Sbjct: 67 LDVDAAIIFADLLLPIEPMGLKLKYEKGEGPVIGNPVRTSDD--VDSLSTTNTDELGYVG 124
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I + + L + ++GF GAP+T+ASYMI GG ++ + + Y + + L+ +
Sbjct: 125 EAIQHVVRALAGKVPVVGFVGAPFTMASYMIEGGASRNFVRTKKLMYSDETLWRRLMGKI 184
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
DV A + +Q+ AG IQ+FD+ G LG ++ +AA +I +R I
Sbjct: 185 VDVLAPFAHSQVAAGARAIQVFDSWVGALGSDDYVRFAAPYSRALIERIRST--GVPVIH 242
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
F GA + + +G+DW + + A ++ +QGNLDP+ L +
Sbjct: 243 FGTGASGFFRELHAAGG-DVMGVDWRINIDQAWMDISYRSAIQGNLDPVALFAPLPELRT 301
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +L G+ P IFNLGHGI P+ +NV +V+ VR +
Sbjct: 302 KVQELLKRTGTRPGHIFNLGHGILPETPVENVKAVVELVREFR 344
>gi|15827506|ref|NP_301769.1| uroporphyrinogen decarboxylase [Mycobacterium leprae TN]
gi|221229983|ref|YP_002503399.1| uroporphyrinogen decarboxylase [Mycobacterium leprae Br4923]
gi|8928559|sp|P46809|DCUP_MYCLE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|254767699|sp|B8ZQX2|DCUP_MYCLB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|13093056|emb|CAC31424.1| uroporphyrinogen decarboxylase [Mycobacterium leprae]
gi|219933090|emb|CAR71138.1| uroporphyrinogen decarboxylase [Mycobacterium leprae Br4923]
Length = 357
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 195/363 (53%), Gaps = 27/363 (7%)
Query: 1 MNERKQKI----LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R++ + L + G P+W MRQAGR LPEYR +R+++ + L C+ PE
Sbjct: 1 MSTRRELLESPYLAAVSGRKPCRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPEVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNID 114
E+TLQP+RRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +I+ + P
Sbjct: 60 EITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKP--- 116
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + PIFQ+IS+L L + LIGF GAP+T+ASY++ GG ++H + +
Sbjct: 117 LEPQAIQPIFQAISLLVAAL-GDVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEP 175
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+++ L+D L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y RI + V
Sbjct: 176 ASWHTLMDKLTDLTLGFLLGQIDAGVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVA 235
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQ 286
F G +L S +G+DW L A ++ +Q
Sbjct: 236 EH--GVPMTHFGVGTADLLGAMSAAVRSGEKPGHQAVVGVDWRTSLTDAAARVEPCTALQ 293
Query: 287 GNLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GNLDP+ L+ G + ++D V G+ +FNLGHG+ P+ DP + +LV
Sbjct: 294 GNLDPVVLLAGWPAVERVARTVVDDGRRAVVAGAAGHVFNLGHGVLPETDPGVLSELVSF 353
Query: 341 VRS 343
+ S
Sbjct: 354 IHS 356
>gi|699194|gb|AAA62959.1| hemE [Mycobacterium leprae]
Length = 382
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 195/363 (53%), Gaps = 27/363 (7%)
Query: 1 MNERKQKI----LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R++ + L + G P+W MRQAGR LPEYR +R+++ + L C+ PE
Sbjct: 26 MSTRRELLESPYLAAVSGRKPCRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPEVAC 84
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLNPNID 114
E+TLQP+RRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +I+ + P
Sbjct: 85 EITLQPLRRYDVDAAILFSDIVVPLCAAGIDLDIVPDVGPVIGDPVRTATDIHAMKP--- 141
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + PIFQ+IS+L L + LIGF GAP+T+ASY++ GG ++H + +
Sbjct: 142 LEPQAIQPIFQAISLLVAAL-GDVPLIGFAGAPFTLASYLVEGGPSRNHPRTKAMMLAEP 200
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+++ L+D L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y RI + V
Sbjct: 201 ASWHTLMDKLTDLTLGFLLGQIDAGVDAIQVFDSWAGTLSLSDYRQYVLPHSARIFATVA 260
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQ 286
F G +L S +G+DW L A ++ +Q
Sbjct: 261 EH--GVPMTHFGVGTADLLGAMSAAVRSGEKPGHQAVVGVDWRTSLTDAAARVEPCTALQ 318
Query: 287 GNLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GNLDP+ L+ G + ++D V G+ +FNLGHG+ P+ DP + +LV
Sbjct: 319 GNLDPVVLLAGWPAVERVARTVVDDGRRAVVAGAAGHVFNLGHGVLPETDPGVLSELVSF 378
Query: 341 VRS 343
+ S
Sbjct: 379 IHS 381
>gi|320033479|gb|EFW15427.1| uroporphyrinogen decarboxylase [Coccidioides posadasii str.
Silveira]
Length = 344
Score = 371 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 117/353 (33%), Positives = 180/353 (50%), Gaps = 37/353 (10%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ +G + PPIW+MRQAGRYLPEY + + ++F + C PE LTLQPI
Sbjct: 9 KNDLLLKAARGEKVQRPPIWIMRQAGRYLPEYHEAK-GTRDFFECCRDPEVASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V VE +GP +P+ + + + ++
Sbjct: 68 ERYEGLIDAAIIFSDILVIPQAMGMTVEMVEKKGPHFPEPLKSPDDGQYERVMTKKVDVK 127
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R+KL + LIGFCGAPWT+ YM+ GG K Q++ +
Sbjct: 128 AELDYVYKAITLTRQKLRGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTW-------- 179
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
YL Q+ AG ++Q+FD+ AG L F +A + I + + ++
Sbjct: 180 -------------YLALQVAAGAQLVQVFDSWAGELSPASFSEFALPYLRYIAANLPKRV 226
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
Y FAKGA Y L + + + N +GLDW + A + +QGN DP
Sbjct: 227 VELGYEAVPMTVFAKGAWYALDDLCQ-SGYNVVGLDWLHDPAQATRIANGRVTLQGNADP 285
Query: 292 MRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V ++ G G +I NLGHGITP V+P+++ + +
Sbjct: 286 GCLYGSREAITAVVENMVKGFGGGKQRWIVNLGHGITPFVNPEDLKFFFQEIH 338
>gi|147844103|emb|CAN82689.1| hypothetical protein VITISV_026490 [Vitis vinifera]
Length = 412
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 95/343 (27%), Positives = 169/343 (49%), Gaps = 6/343 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+++ +G+ + PP W+MRQAGRY+ YR++ +K+ +F T + VE++LQP
Sbjct: 54 SDPLLVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRSETTDLIVEISLQPW 113
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
++ D I+FSDIL A G E GP + PI ++ + ID L L
Sbjct: 114 EAFHPDGVIIFSDILTPLPAFGVPFDIEEVRGPVIHSPIRSEAGLKVLHPID--LKKLHF 171
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +S+ ILR+++ ++GF GAPWT+ +Y++ GG + + + + LL
Sbjct: 172 VGESLRILRQEVGGQAAVLGFVGAPWTIGTYIVEGGTTRTYTIIKSMCHTAPNVLRALLS 231
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ +EY++ Q+ +G IQIFD+ G L +E ++ + ++S VR++ P
Sbjct: 232 HLTQAISEYIVFQVESGAHCIQIFDSWGGQLPPDMWECWSKPYIEEMVSVVRKRCPGTPI 291
Query: 243 ISFAKGAGYMLKNYRRLTDSNA-IGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
+ + G G +L+ + T L+W+V ++ L +QGN+DP L
Sbjct: 292 VLYINGNGGLLERM-KGTGVECDWNLNWTVDMADGRKRLGSGISIQGNVDPAYLFSPLPA 350
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + ++ G I NLGHG+ + V + R+
Sbjct: 351 LTNEIQRVVRCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARN 393
>gi|254776014|ref|ZP_05217530.1| uroporphyrinogen decarboxylase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 357
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 112/350 (32%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + G + P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+R
Sbjct: 13 ESPYLAAVNGRKPHRVPVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V G ++ V GP + P+ T ++ + PI
Sbjct: 72 RHDVDAAILFSDIVVPLLGAGIDLDIVAGVGPVIASPVRTAADVAAMKTLER--QRVQPI 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +L L + LIGF GAP+T+ASY+I GG + H + + + +++ L++
Sbjct: 130 ADAVRLLVSAL-GEVPLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEK 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L Q+ AGVD +Q+FD+ AG L + +Y R+ +A+
Sbjct: 189 LTDITVGFLRVQLDAGVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADY--GVPMT 246
Query: 244 SFAKGAGYMLKNYR---RLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F G +L + + +G+DW L+ A + +QGNLDP+ L+ G
Sbjct: 247 HFGVGTAELLGAMSAALKPAPATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWP 306
Query: 300 VMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ A++D G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 307 VVETAARAVVDDGRRAVDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|297584766|ref|YP_003700546.1| uroporphyrinogen decarboxylase [Bacillus selenitireducens MLS10]
gi|297143223|gb|ADH99980.1| uroporphyrinogen decarboxylase [Bacillus selenitireducens MLS10]
Length = 347
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 17/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ + I+ P+W MRQAGR PEYR+++KK+ + + PE +T P+
Sbjct: 3 NDQFLKSCRKEAIDHVPVWYMRQAGRSQPEYRELKKKY-SLEGITEDPELCAYVTKLPVD 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPIT----TQEIYLLNPNIDLFLNY 119
+Y+ DAAIL+ DI+ A+G +V+ + GP + +PIT + LNP D
Sbjct: 62 QYDNDAAILYKDIMTPLPAMGVDVKIQKGIGPVISNPITGMRDVDALTALNPEKD----- 116
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I +LRK+L ++ LI F GAP+T+ASYMI GG K++ + + Y +
Sbjct: 117 VPYVLDTIKLLRKQL--NVPLISFSGAPFTLASYMIEGGPSKNYYKTKGLMYSEPETWFK 174
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D L D+ Y+ AQ+ AG IQIFD+ G L + +++ Y + RI + ++ +
Sbjct: 175 LMDTLGDMVITYVKAQVQAGSQAIQIFDSWVGTLNQADYQFYVKPVMERIFNELQGE--G 232
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F GA ++ ++ + +GLDW P+ A + VQGNLDP L +
Sbjct: 233 VPLILFGIGARHLTLDWNSF-HLDVVGLDWRYPIHEARKDGVTKAVQGNLDPTVLTAPWR 291
Query: 300 VMIDGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I+D L F+FNLGHG+ P+VDP + L V
Sbjct: 292 VIETRAKEIIDQGLEQPGFVFNLGHGVFPEVDPAKLRQLTAFVHDYS 338
>gi|51474053|ref|YP_067810.1| uroporphyrinogen decarboxylase [Rickettsia typhi str. Wilmington]
gi|81692268|sp|Q68VM8|DCUP_RICTY RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|51460365|gb|AAU04328.1| Uroporphyrinogen III decarboxylase [Rickettsia typhi str.
Wilmington]
Length = 345
Score = 371 bits (953), Expect = e-101, Method: Composition-based stats.
Identities = 133/325 (40%), Positives = 195/325 (60%), Gaps = 2/325 (0%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PIW MRQAGRYLPEY+++R+ KNFLD C+ E+TLQPIRRY DAAI+FSDI
Sbjct: 12 NKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCFDVNKATEVTLQPIRRYGLDAAIIFSDI 71
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
LV+ ALG V F EN GP + +Q+ + N L +F+ I +++KLP++
Sbjct: 72 LVLPSALGWEVDFKENIGPVLKQFKSQKDFQYLQRDSN--NKLENVFKIIKKVKEKLPSN 129
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F+++ +A+YLI Q
Sbjct: 130 TSLIGFAGSPWTVMSYMLEGKGKRDFITSKKFVYENKILAKDLLNFITEKTADYLINQAK 189
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G D+++IFD+ +G L E +F + +II V+ + N I+F KGAG + + +
Sbjct: 190 SGADILKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFINIPIITFPKGAGLLYEKFI 249
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + + +D VPL E + VQGNLDP+ L+ +++ + IL + F
Sbjct: 250 KEVPIDILAVDQMVPLEKMKEWSNKVIVQGNLDPVVLLTNKEIIEEKTYKILQGMKGKNF 309
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVR 342
IFNLGHGI P+ P+NV L K +R
Sbjct: 310 IFNLGHGILPETPPENVEFLTKYIR 334
>gi|46447147|ref|YP_008512.1| uroporphyrinogen decarboxylase [Candidatus Protochlamydia
amoebophila UWE25]
gi|81697618|sp|Q6MB12|DCUP_PARUW RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|46400788|emb|CAF24237.1| probable uroporphyrinogen decarboxylase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 364
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 131/343 (38%), Positives = 194/343 (56%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++L+ LQ + PP+WLMRQAGR+L YR +R+K+ +FLDMC+ PE E+TL PI
Sbjct: 28 NDRLLQALQCRNNSRPPVWLMRQAGRHLASYRALREKY-SFLDMCHNPELIAEVTLLPIE 86
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
Y DAAILFSDILVI +AL VRF + GP ++ T + + L L +
Sbjct: 87 AYQVDAAILFSDILVIPEALKVGVRFEDKVGPIIEKPITNLHDIEKLAMPEDLTSLEFVK 146
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ I L+ +L ++ LIGFCGAP+TVASYMI G +D + + + Y + F+ LL +
Sbjct: 147 EGIRCLQPRL--NVPLIGFCGAPFTVASYMIEGKTSRDFKKIKHWMYHEPQGFHTLLRKI 204
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D S YL QI AGV +QIFD+ A L +F+ ++ + I+ +++ + I
Sbjct: 205 ADWSIAYLNMQIDAGVHALQIFDSWANTLSYRQFQEFSLNYLKYILKGLKK---DIPLIL 261
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMID 303
F +G+ + + + A+GLDW+ + ++ +QGNLDP L + +
Sbjct: 262 FCRGSSVFGPDLASIKPA-AVGLDWNCRVKRMRDVIPYPIALQGNLDPDLLYAPLPKIRE 320
Query: 304 GVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
VNA+LD + G FI NLGHGI P V + V LV+TVR +
Sbjct: 321 EVNALLDEMEGDRGFILNLGHGIFPDVSEEAVRTLVETVRERR 363
>gi|118466726|ref|YP_882750.1| uroporphyrinogen decarboxylase [Mycobacterium avium 104]
gi|171472973|sp|A0QIL2|DCUP_MYCA1 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118168013|gb|ABK68910.1| uroporphyrinogen decarboxylase [Mycobacterium avium 104]
Length = 357
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 112/350 (32%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + G + P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+R
Sbjct: 13 ESPYLAAVNGRKPHRVPVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V G ++ V GP + P+ T ++ + PI
Sbjct: 72 RHDVDAAILFSDIVVPLLGAGIDLDIVAGVGPVIASPVRTAADVAAMKPLER--QRVQPI 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +L L + LIGF GAP+T+ASY+I GG + H + + + +++ L++
Sbjct: 130 ADAVRLLVSAL-GEVPLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPESWHTLMEK 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L Q+ AGVD +Q+FD+ AG L + +Y R+ +A+
Sbjct: 189 LTDITVGFLRVQLDAGVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADY--GVPMT 246
Query: 244 SFAKGAGYMLKNYR---RLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F G +L + + +G+DW L+ A + +QGNLDP+ L+ G
Sbjct: 247 HFGVGTAELLGAMSAALKPAPATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWP 306
Query: 300 VMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ A++D G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 307 VVETAARAVVDDGRRAVDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|308177935|ref|YP_003917341.1| uroporphyrinogen decarboxylase [Arthrobacter arilaitensis Re117]
gi|307745398|emb|CBT76370.1| uroporphyrinogen decarboxylase [Arthrobacter arilaitensis Re117]
Length = 351
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 112/344 (32%), Positives = 177/344 (51%), Gaps = 10/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +++ L G + P+W MRQAGR LPEY ++R+ + LD C P E+TLQP
Sbjct: 14 TQDSALIQALTGKKPSHHPVWFMRQAGRSLPEYLKLREGV-SMLDSCLDPAMASEITLQP 72
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR+ DA I FSDI++ G V V GP +D PI T E P +L L
Sbjct: 73 VRRHKVDAGIFFSDIVIPLRLAGIGVDIVPGVGPVLDTPIRTAEQVAALP--ELTDEALE 130
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI +++ + +L LIGF GAP+TVA+YM+ G +DH R + + ++ L+
Sbjct: 131 PIREAVRLTVAEL-GSTPLIGFAGAPFTVAAYMVEGKPSRDHLGPRTMMHTDPEVWDGLM 189
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ ++ S ++L AQ+ AG Q+FD+ AG L +++ + A + + VR
Sbjct: 190 SWAANASGKFLRAQVEAGASASQLFDSWAGSLSLPDYQKFVAPYSVKSLDDVRDL--GVP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G G +L R + +G+D+ +PL A L ++ VQGN+DP L +V
Sbjct: 248 LIHFGTGTGELLTAMRD-AGVDTVGVDYRIPLETAIERLGQDVSVQGNIDPALLAAPWEV 306
Query: 301 MIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V ++ + + NLGHG+ P DP + +V+ + S
Sbjct: 307 LEAHVREVVAAGKNARGHVVNLGHGVPPTTDPTVLTRVVELIHS 350
>gi|114556198|ref|XP_001154132.1| PREDICTED: similar to Chain A, Phe232leu Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 2 [Pan
troglodytes]
Length = 321
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 114/344 (33%), Positives = 167/344 (48%), Gaps = 45/344 (13%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG
Sbjct: 194 ILTDALVPYLVGQVAAGAQ----------------------------------------- 212
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAK + L+ + +GLDW+V A E + K +QGNLDP L + +
Sbjct: 213 IIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEI 271
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 GQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 315
>gi|145294554|ref|YP_001137375.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum R]
gi|166234246|sp|A4QB76|DCUP_CORGB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|23507700|gb|AAN38293.1| uroporphobilinogen decarboxylase [Corynebacterium glutamicum]
gi|140844474|dbj|BAF53473.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 358
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 118/354 (33%), Positives = 181/354 (51%), Gaps = 19/354 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQ
Sbjct: 12 TLNNAPIIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQ 70
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAILFSDI+V A G V V GP +D P+ ++E L P ++ +
Sbjct: 71 PVRRHDVDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSREDVLNLPILE---GNV 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L
Sbjct: 128 PEVEQGIGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L L +QI AG+D +Q+FD+ AG L E ++ + I+ V +
Sbjct: 188 MARLVPTIVNSLKSQIDAGIDAMQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKY--QL 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F G G +L + S +G+DW VPL A E + +QGNLDP L
Sbjct: 246 PRIHFGVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFA 304
Query: 297 GNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I +D + IFNLGHG+ P +++ + V + S
Sbjct: 305 GRAPLTKEIERIKAEAQTAIDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 358
>gi|302834822|ref|XP_002948973.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300265718|gb|EFJ49908.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 390
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L L+G + PP+W+MRQAGRY Y+ + KK F + + VE++LQP
Sbjct: 47 EPLMLRALRGEKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWH 106
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D ILFSDIL + MDPI T +D +
Sbjct: 107 AFKPDGVILFSDILTPLPGMNIPFDMAPGP-IIMDPIRTMAQVEKVTKLDADAA-CPFVG 164
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+S+ LR + N TL+GF GAP+T+A+Y++ GG K+ + A+ + LLD L
Sbjct: 165 ESLRQLRSYIGNQATLLGFVGAPFTLATYIVEGGSSKNFAHIKKMAFSTPEVLHALLDKL 224
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A+Y+ Q AG V+QIFD+ A L +F+ ++ + ++I +VR+ +PN I
Sbjct: 225 ADNVADYVRYQADAGAQVVQIFDSWASELQPQDFDVFSGPYIKKVIDSVRKTHPNLPIIL 284
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
+ G+G +L+ + I LD SV + ++ QGN+DP L +
Sbjct: 285 YISGSGGLLERMAA-AQPDIISLDQSVDFTDGVKRCGANFAFQGNMDPGVLFGSKDFIET 343
Query: 304 GVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + S I NLGHG+ P +V R+
Sbjct: 344 RVMDTIKAARSAGVRHIMNLGHGVLPGTPEDHVGHFFHVART 385
>gi|19551680|ref|NP_599682.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum ATCC
13032]
Length = 374
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 19/354 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQ
Sbjct: 28 TLNNAPIIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQ 86
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAILFSDI+V A G V V GP +D P+ ++ L P ++ +
Sbjct: 87 PVRRHDVDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSRGDVLNLPILE---GNV 143
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L
Sbjct: 144 PEVEQGIGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHAL 203
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L L +QI AG+D +Q+FD+ AG L E ++ + I+ V +
Sbjct: 204 MARLVPTIVNSLKSQIDAGIDAVQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKY--QL 261
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F G G +L + S +G+DW VPL A E + +QGNLDP L
Sbjct: 262 PRIHFGVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFA 320
Query: 297 GNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I +D + IFNLGHG+ P +++ + V + S
Sbjct: 321 GRAPLTKEIERIKAEAQTAVDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 374
>gi|58584262|ref|YP_197835.1| uroporphyrinogen-III decarboxylase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|75508022|sp|Q5GTT1|DCUP_WOLTR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|58418578|gb|AAW70593.1| Uroporphyrinogen-III decarboxylase [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 347
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 132/331 (39%), Positives = 191/331 (57%), Gaps = 7/331 (2%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAIL 73
G PIWLMRQAGR LPEYR+ K +F+++CY + VELTLQP+ R++ DAAI+
Sbjct: 24 GKQGRKIPIWLMRQAGRSLPEYRRAVKDTSSFMEICYNTDLVVELTLQPVARFSMDAAII 83
Query: 74 FSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
FSDIL++AD LG +V F+ GP + P+ + N LPI +I +R K
Sbjct: 84 FSDILIVADVLGCDVDFIRGVGPTIKPVKNFKELR---NPQKIETKTLPILNAIRKVRDK 140
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
LP +LIGF G PWTVASY+I G K + + + +++ +++V+ YL+
Sbjct: 141 LPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKVLNL---HPSSLEQIIEQITEVTISYLV 197
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
QI G DVIQ+FD++AG L FE + +I+SA++ K+P+ I F K AG +
Sbjct: 198 KQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPDFPIIGFPKSAGSLY 257
Query: 254 KNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
K+Y T +A+ +D++VP+ +A E K P+QGNL+P L I I+D
Sbjct: 258 KDYCEKTGVSAVSIDYNVPIEWAKENLK-IPLQGNLNPSLLAYNKMEAIKETKRIIDCFR 316
Query: 314 SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
PFIFNLGHG+ P +N+ LV V+S+
Sbjct: 317 DLPFIFNLGHGVLPNTPIENIAALVDLVKSQ 347
>gi|326332252|ref|ZP_08198532.1| uroporphyrinogen decarboxylase [Nocardioidaceae bacterium Broad-1]
gi|325949958|gb|EGD42018.1| uroporphyrinogen decarboxylase [Nocardioidaceae bacterium Broad-1]
Length = 360
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 109/345 (31%), Positives = 173/345 (50%), Gaps = 12/345 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L+ L G + P+W MRQAGR LPEY ++R+ L+ C E E+TLQP+RR
Sbjct: 17 SPFLQALAGQKPSRTPVWFMRQAGRSLPEYLKVREGIG-MLESCQNAELITEITLQPVRR 75
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
Y DAAI FSDI++ A+G ++ GP + DP+ T P DL ++ I
Sbjct: 76 YGVDAAIFFSDIVLPLKAVGVDLEIKPGVGPVVADPVRTMADVEAIP--DLTPEHVPYIT 133
Query: 125 QSISILRKKL---PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ L +L LIGF GAP+TVASY++ GG K++ + + + ++ L+
Sbjct: 134 EAVQNLTGELAGINGGTPLIGFAGAPFTVASYLVEGGPSKEYAKTKALMFGAPDVWDALM 193
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
++ +SA +L Q+ AG +Q+FD+ AG ++E + ++S +
Sbjct: 194 RKIAGISAAFLEVQVRAGASAVQLFDSWAGACTPADYERHVLPHSTAVLSRIGEL--GVP 251
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F + +L + +G+DW PL +A +L VQGNLDP + V
Sbjct: 252 RIHFGVNSAMLLPLMGS-AGAEVVGVDWRTPLDWAIDQLGDGFGVQGNLDPALVFAPTDV 310
Query: 301 MIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
M++ I++ +FNLGHG+ P DP + L + V+S
Sbjct: 311 MLEQAGRIIETGRRAKGHVFNLGHGVIPSTDPDQLARLTEFVQSY 355
>gi|62389335|ref|YP_224737.1| uroporphyrinogen decarboxylase [Corynebacterium glutamicum ATCC
13032]
gi|23813976|sp|Q8NT75|DCUP_CORGL RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|21323200|dbj|BAB97828.1| Uroporphyrinogen-III decarboxylase [Corynebacterium glutamicum ATCC
13032]
gi|41324669|emb|CAF19151.1| UROPORPHYRINOGEN DECARBOXYLASE [Corynebacterium glutamicum ATCC
13032]
Length = 358
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 117/354 (33%), Positives = 180/354 (50%), Gaps = 19/354 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
I++ G P+W MRQAGR LPEY+++R+ + LD C+ PE E+TLQ
Sbjct: 12 TLNNAPIIDAANGKTPTRTPVWFMRQAGRSLPEYKKVREGI-SMLDSCFMPELLAEITLQ 70
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAILFSDI+V A G V V GP +D P+ ++ L P ++ +
Sbjct: 71 PVRRHDVDAAILFSDIVVPLRAAGVGVEIVAGRGPVLDAPVRSRGDVLNLPILE---GNV 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q I I+ +L + LIGF GAP+T+ASY++ GG K+H + + + + ++ L
Sbjct: 128 PEVEQGIGIILDELSDSQALIGFAGAPFTLASYLVEGGPSKNHEKTKAMMHGDPETWHAL 187
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L L +QI AG+D +Q+FD+ AG L E ++ + I+ V +
Sbjct: 188 MARLVPTIVNSLKSQIDAGIDAVQLFDSWAGFLTERDYTEFVLPYSTEILEEVGKY--QL 245
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVV 296
I F G G +L + S +G+DW VPL A E + +QGNLDP L
Sbjct: 246 PRIHFGVGTGELLGAMSK-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFA 304
Query: 297 GNQVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G + + I +D + IFNLGHG+ P +++ + V + S
Sbjct: 305 GRAPLTKEIERIKAEAQTAVDAGHATGHIFNLGHGVLPNTVAEDITEAVSIIHS 358
>gi|167970099|ref|ZP_02552376.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis H37Ra]
Length = 357
Score = 369 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 120/362 (33%), Positives = 184/362 (50%), Gaps = 25/362 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 1 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 60 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 119 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 177 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN-------AIGLDWSVPL-SFALELQKEGPVQG 287
F G +L + +G+DW PL A + +Q
Sbjct: 237 H--GVPMTHFGVGTAELLGAMSEAVTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQD 294
Query: 288 NLDPMRLVVGNQVMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
NLDP ++ G + A++D G+ IFNLGHG+ P+ DP + DLV V
Sbjct: 295 NLDPAVVLAGWPAVERAARAVVDDGRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLV 354
Query: 342 RS 343
S
Sbjct: 355 HS 356
>gi|299139339|ref|ZP_07032514.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX8]
gi|298598608|gb|EFI54771.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX8]
Length = 375
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 113/348 (32%), Positives = 178/348 (51%), Gaps = 11/348 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ + ++ P+W +RQAGRY+PEY +R K + LD+C TPE E+T+ R
Sbjct: 25 SRFVRACLRLPVDRTPVWFLRQAGRYMPEYMAVR-KHHSLLDICRTPEIASEVTITAAER 83
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPI 123
DAAI+F+D+L+ +G + FV EGP ++ P+ + E + L + L Y+
Sbjct: 84 LGVDAAIIFADLLLPFTPMGLDFEFVNGEGPVVNTPVRSLEHVQALRTDRTDDLRYVASA 143
Query: 124 FQSISI---LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ + + + +IGFCGAP+T+ASYMI GG +++ + + Y + + L
Sbjct: 144 IEKVAKHFNAPRPDGDTLGIIGFCGAPFTLASYMIEGGSSRNYVETKKIMYSHDATWALL 203
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ L V Y Q+ AG DVIQIFD+ AG L ++ Y ++ V+
Sbjct: 204 MEKLVTVLVAYAEQQVEAGADVIQIFDSWAGALSVSDYRQYCLAPTTELVRRVKAL--GV 261
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQ 299
I F +L R T ++ +GLDW +PL G VQGNLDP+ L
Sbjct: 262 PVIYFGVDTASLLPTMRETT-ADVLGLDWRIPLDEGWRAAGAGCAVQGNLDPITLFAPED 320
Query: 300 VMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V+ D V +L++ G IFNLGHGI P NV+ +V+ V+ +
Sbjct: 321 VLRDRVQEVLNLANGRPGHIFNLGHGIVPGTPVDNVIRVVEWVKEYGV 368
>gi|319948478|ref|ZP_08022612.1| uroporphyrinogen decarboxylase [Dietzia cinnamea P4]
gi|319437845|gb|EFV92831.1| uroporphyrinogen decarboxylase [Dietzia cinnamea P4]
Length = 377
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 117/343 (34%), Positives = 175/343 (51%), Gaps = 13/343 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
L+ + G + P+W MRQAGR LPEY+++R L+ C+ PE T E+TLQP+RR+
Sbjct: 36 PYLDEVTGRGGSHTPVWFMRQAGRSLPEYKEVR-GDSTMLEACFDPEMTCEITLQPVRRH 94
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI FSDI++ A G ++ V GP + +PI + P +L + L I +
Sbjct: 95 GVDAAIFFSDIVIPLAAAGVDIDIVPGTGPVVAEPIRDESDVAALP--ELTPDRLEAIEE 152
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++ +L + LIGF GAP+T+ASY+I GG ++H + Y +N L+ L+
Sbjct: 153 AVRLITAELDPAVALIGFAGAPFTLASYLIEGGPSRNHEHTKSLMYSRPEVWNELMAKLA 212
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D++ +L AQ+ AGVD IQ+FD+ AG L E ++ + RI S + F
Sbjct: 213 DLTTVFLRAQVGAGVDAIQLFDSWAGALTERDYRSLVLPHSTRIFSD--EVISSVPRTHF 270
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
G G +L +G+DW +PL A +QGNLDP L + V
Sbjct: 271 GVGTGELLGAMGE-AGPEVVGVDWRIPLDDAATRVPGKVLQGNLDPAMLFADRSALDGEV 329
Query: 306 NAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL+ G+ +FNLGHG+ P D V +V V
Sbjct: 330 RRILEEGRRAREAGAAGHVFNLGHGVLPATDAGAVTHVVDLVH 372
>gi|295691557|ref|YP_003595250.1| uroporphyrinogen decarboxylase [Caulobacter segnis ATCC 21756]
gi|295433460|gb|ADG12632.1| uroporphyrinogen decarboxylase [Caulobacter segnis ATCC 21756]
Length = 347
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 124/348 (35%), Positives = 183/348 (52%), Gaps = 5/348 (1%)
Query: 1 MNERKQKI--LEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M Q + L L G PPIW MRQAGRYLPEYR +R +F+ C+ PE E+
Sbjct: 1 MTSPSQTLKFLAALSGETHAHPPIWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEV 60
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
TLQP+RR+ FDAAI+F+DIL+I ALG+ V F EGP++ + +
Sbjct: 61 TLQPMRRFPFDAAIVFADILLIPGALGQKVWFEAGEGPKLG--DMPSVESMAEKAGEAGK 118
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++++ +R L LIGF GAPWTVA+YMI G D R FAYQN +
Sbjct: 119 ALSLVGETLTRVRSALDPSKALIGFAGAPWTVATYMIEKGSS-DRSGARTFAYQNPETTD 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L D + +YL Q+ AG +++F++ A L E F+ + +I+ +R +
Sbjct: 178 ALIQVLVDSTIDYLAMQVDAGAQAVKLFESWAEGLSEPLFDRLVTQPHKKIVEGLRARGV 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F +GAG +++ Y + LD +QK +QG LDP+ L G
Sbjct: 238 TVPIIGFPRGAGALVEGYAAQVPVQGVALDTQASAKLGQAIQKSKTIQGALDPLLLRAGG 297
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
++ V+ +L+ GP+IFNLGHGI P +V +++ V +K+
Sbjct: 298 DALLRRVDELLEQWNQGPYIFNLGHGILPDTPIAHVEAVLERVTGQKV 345
>gi|291295787|ref|YP_003507185.1| uroporphyrinogen decarboxylase [Meiothermus ruber DSM 1279]
gi|290470746|gb|ADD28165.1| uroporphyrinogen decarboxylase [Meiothermus ruber DSM 1279]
Length = 352
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 118/347 (34%), Positives = 177/347 (51%), Gaps = 13/347 (3%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
L G P+WLMRQAGRYLPEYR I+ + +F +M TPE E+TLQ
Sbjct: 7 TTSSPLFLRAAWGEDTPRAPLWLMRQAGRYLPEYRAIKARA-SFWEMVRTPELAAEITLQ 65
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI--YLLNPNIDLFLN 118
P+RR+ DAAILFSDI+ A+G + F N GP + +P+ TQ L P
Sbjct: 66 PLRRFPLDAAILFSDIMTPLPAMGVPIEF--NPGPVVAEPLRTQAQLEALRLPEPQEIAP 123
Query: 119 YLLPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y + ++I ++R++L + LIGF GAP T+A+Y++ G KD+ + R F Q
Sbjct: 124 Y---VAEAIRLVRRELAGKPVALIGFAGAPLTLATYLVQGSGAKDYEEFRAFLRQAPHLA 180
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL L++++ YL QI AG + +Q+FD+ AG + + +++SA+
Sbjct: 181 HQLLQKLTELTIRYLRMQIEAGAEAVQLFDSWAGLHDPDTYRTFGLPYNQKVLSALAGL- 239
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG 297
I A GA ++ L A+ +DW + L+ +QGNLDP L+
Sbjct: 240 -GVPRIYLAVGASHLYP-LLALLPCEAVSVDWRLSLAQVRPFFPAHTLQGNLDPAVLLAP 297
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V+ + +L GP IFNLGHG+ P++V LV+ V
Sbjct: 298 LEVITQEAHKVLRAGLGGPHIFNLGHGVIRTTPPEHVAHLVEVVHQF 344
>gi|255324257|ref|ZP_05365379.1| uroporphyrinogen decarboxylase [Corynebacterium tuberculostearicum
SK141]
gi|255298773|gb|EET78068.1| uroporphyrinogen decarboxylase [Corynebacterium tuberculostearicum
SK141]
Length = 344
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 115/353 (32%), Positives = 180/353 (50%), Gaps = 19/353 (5%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + +++ G + PP+W MRQAGR LPEYR R+ + LD C+ PE E+T
Sbjct: 1 MSRLNRAPLIDAALGRTPSRPPVWFMRQAGRSLPEYRAAREGI-SMLDSCFMPELLAEIT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLN 118
LQP+RR++ DAAILFSDI+V A G V V GP M+ + ++E P ++
Sbjct: 60 LQPVRRHDVDAAILFSDIVVPLKAAGVKVDIVPGRGPVMEQAVRSREDVGKLPLLEAD-- 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + I+ + +L LIGF GAP+T+ASY+I GG K+H + + + + ++
Sbjct: 118 -VPEVTEGIARILAELTETQALIGFVGAPFTLASYLIEGGPSKNHQRTKALMHADPETWH 176
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L +L Q+ AG+D +Q+FD+ AG L E ++ + I+++V+
Sbjct: 177 MLMRRLVPTITRFLQVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSREILASVK---- 232
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G G +L S +G+D+ VP+ A E +QGNLDP L G+
Sbjct: 233 -IPRIHFGVGTGELLPAMSE-AGSEVMGVDYRVPMDAAAERVSARVLQGNLDPAMLFAGD 290
Query: 299 QVMIDGVNAI---LDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V I +D I+NLGHG+ P D + + V + E
Sbjct: 291 DAVRQAVRTIRGEVDRARERGDIDGHIWNLGHGVLPTTDAEAITRAVSIIHEE 343
>gi|8928071|sp|Q9RV96|DCUP_DEIRA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 344
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 176/345 (51%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L+ +G P+W MRQAGRY+PEYR +R K L+ TP+ E+TLQPI
Sbjct: 2 RDSAFLKTARGEQAPYTPVWFMRQAGRYMPEYRALRAG-KTMLECIRTPDLAAEITLQPI 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ DAAILF+DIL +G ++ FV GP + +PI T + + + +
Sbjct: 61 KAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVL-GVPATAETMPY 119
Query: 123 IFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+SI +L +L + I LIGF GAP+T+ASY I G +++ + + F Y A+ L+
Sbjct: 120 TAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWARLM 179
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
V A+YL Q+ AG +QIFD+ G L ++++ + + +I V++
Sbjct: 180 GKFESVLADYLTEQVKAGASAVQIFDSWVGALSVYDYQTFVKPATAGLIERVKKL--GVP 237
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L S+ +G DW PL A +L Q +QGNLDP+ L +
Sbjct: 238 VIYFGTGATHLMPDMASL-GSDVMGADWRTPLDKAWDLIQPGQSIQGNLDPLLLQAPWRE 296
Query: 301 MIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + IL G IFN+GHG+ P+ V L V +
Sbjct: 297 LKHQTDRILHEANGRPGHIFNVGHGLLPETPQDMVHRLTDYVHEQ 341
>gi|58616732|ref|YP_195931.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str. Gardel]
gi|58416344|emb|CAI27457.1| Uroporphyrinogen decarboxylase [Ehrlichia ruminantium str. Gardel]
Length = 335
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 143/323 (44%), Positives = 203/323 (62%), Gaps = 4/323 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY++I K +FL+MCY PE E+TLQPI+R+N DAAI+FSDILVI
Sbjct: 15 PIWFMRQAGRYLPEYQKIAKNAPSFLEMCYNPEIVKEITLQPIKRFNLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F +++GP + I++ + N + L++L +FQSI +R+ L L
Sbjct: 75 PDALGCKVTFTKDKGPELKEISS-YQEINNISNSEILSHLSNVFQSIKEVRQCLHKDKAL 133
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVA+YMI G K+ + + Y +R ++D +++ + YLI QI +GV
Sbjct: 134 IGFAGGPWTVATYMI--GRDKNFSKIKEMCYIKNRNLEKIIDKITEATISYLIKQIESGV 191
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
+V+QIFD++AG L EFE + IIS+VR+ YP+ FI F KGAG + K + + T
Sbjct: 192 NVLQIFDSNAGVLSCEEFERWIINPTKEIISSVRKTYPDFPFIGFPKGAGVLYKKFTQET 251
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ + +D+SVP+S+A E +QGN+DP L + I I++++ P IFN
Sbjct: 252 NVSVTSIDYSVPMSWAKENIPSI-IQGNIDPYLLAYDKEGAISQAKKIINIMKKEPLIFN 310
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHGI P +NV LV+ V+S
Sbjct: 311 LGHGIIPSTPVENVQALVEFVKS 333
>gi|41408897|ref|NP_961733.1| uroporphyrinogen decarboxylase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|81700458|sp|Q73W61|DCUP_MYCPA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|41397256|gb|AAS05116.1| HemE [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 357
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 112/350 (32%), Positives = 180/350 (51%), Gaps = 17/350 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L + G + P+W MRQAGR LPEYR +R + + L C+ E E+TLQP+R
Sbjct: 13 ESPYLAAVNGRKPHRVPVWFMRQAGRSLPEYRALRAQ-HDMLSACFDAELVCEITLQPVR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V G ++ V GP + P+ T ++ + PI
Sbjct: 72 RHDVDAAILFSDIVVPLLGAGIDLDIVAGVGPVIASPVRTAADVAAMKPLER--QRVQPI 129
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +L L + LIGF GAP+T+ASY+I GG + H + + + +++ L++
Sbjct: 130 ADAVRLLVSAL-VEVPLIGFAGAPFTLASYLIEGGPSRHHARTKAMMLADPDSWHALMEK 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L Q+ AGVD +Q+FD+ AG L + +Y R+ +A+
Sbjct: 189 LTDITVGFLRVQLDAGVDAVQVFDSWAGALSLANYRSYVQPHSARVFAALADY--GVPMT 246
Query: 244 SFAKGAGYMLKNYR---RLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
F G +L + + +G+DW L+ A + +QGNLDP+ L+ G
Sbjct: 247 HFGVGTAELLGAMSAALKPAPATVVGVDWRTALADAATRVMPGTALQGNLDPVVLLAGWP 306
Query: 300 VMIDGVNAILD------VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ A++D G+ +FNLGHG+ P+ DP + +LV V S
Sbjct: 307 VVETAARAVVDDGRRAVDAGAAGHVFNLGHGVLPETDPGVLTELVSLVHS 356
>gi|159487621|ref|XP_001701821.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
gi|158281040|gb|EDP06796.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
Length = 398
Score = 368 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 170/342 (49%), Gaps = 4/342 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L V +G P+WLMRQAGRY+ +R+ K+ F TPE +EL+LQP+
Sbjct: 40 QDPLLLRVARGEDAERTPVWLMRQAGRYMAAFREYSDKYP-FRMRSETPEIAIELSLQPL 98
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R + D I FSDIL +G V+ +GP + +P+ + E + + L
Sbjct: 99 RAFRPDGIIFFSDILTPLPGMGIEFDMVKGKGPVIANPMRSTEHLKQLTPLSDPASRLPF 158
Query: 123 IFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
I +S LRK+ ++ +TL+GF G PWT+A+Y + G KD + + + N + L
Sbjct: 159 INTILSTLRKEADSNGVTLLGFIGTPWTLAAYSMEGKADKDCKETKKIMFHNPALLHSFL 218
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
DFL++ Y QI +G VIQ+FD+ A L +F ++ + RI A++ KYP+
Sbjct: 219 DFLTEQLIVYAGYQIESGAQVIQLFDSWAHHLSPAQFTEFSLPYMERITVALKAKYPHVP 278
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I A G L+ R ++ IGLDW+V + A + VQGN+DPM L +V+
Sbjct: 279 VIMHANGGTGKLELMRESA-ADVIGLDWAVDMKDARQQLAGKRVQGNVDPMSLFGPEEVI 337
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V L G I N+GHG+ +V + R
Sbjct: 338 RAEVERCLRAAGPRGHILNVGHGVVQGTPESSVALFCQLARE 379
>gi|333023771|ref|ZP_08451835.1| putative uroporphyrinogen decarboxylase [Streptomyces sp. Tu6071]
gi|332743623|gb|EGJ74064.1| putative uroporphyrinogen decarboxylase [Streptomyces sp. Tu6071]
Length = 322
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 110/327 (33%), Positives = 168/327 (51%), Gaps = 12/327 (3%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGR LPEY + R+ L+ C PE E+T+QP+RR+ DAA+ FSDI+V
Sbjct: 2 WFMRQAGRSLPEYLKAREGIP-MLESCTRPELVAEITMQPVRRHKVDAAVYFSDIVVPLK 60
Query: 83 ALGRNVRFVENEGPRM-DPIT-TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
A+G ++ GP + DP+ ++ L P ++Y + ++I +L +L L
Sbjct: 61 AIGIDLDIKPGIGPVVADPVRGAADLARLRPLQPEDVSY---VTEAIGLLTAEL-GATPL 116
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAP+T+ASY++ GG ++H + + Y + LLD L+D++ +L QI AG
Sbjct: 117 IGFAGAPFTLASYLVEGGPSRNHERTKALMYGQPELWAQLLDRLADITTGFLKVQIEAGA 176
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
+Q+FD+ G L ++ Y + ++ +AV I F G G +L +
Sbjct: 177 SAVQLFDSWVGALSPADYRRYVRPASAKVFAAVAGY--GVPRIHFGVGTGELLHDLGE-A 233
Query: 261 DSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPFI 318
++ +G+DW VPL A + +QGNLDP L + + +LD I
Sbjct: 234 GADVVGVDWRVPLDEAARRVGPGKALQGNLDPAVLFADEAAIREKTTEVLDAARDLEGHI 293
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHG+ P DP + DLV V
Sbjct: 294 FNLGHGVLPTTDPGVLTDLVADVHERS 320
>gi|311740968|ref|ZP_07714793.1| uroporphyrinogen decarboxylase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303770|gb|EFQ79848.1| uroporphyrinogen decarboxylase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 344
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 115/353 (32%), Positives = 178/353 (50%), Gaps = 19/353 (5%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + +++ G + PP+W MRQAGR LPEYR R+ + LD C+ PE E+T
Sbjct: 1 MSRLNRAPLIDAALGRTPSRPPVWFMRQAGRSLPEYRAAREGI-SMLDSCFMPELLAEIT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLN 118
LQP+RR++ DAAILFSDI+V A G V V GP M+ + ++E P ++
Sbjct: 60 LQPVRRHDVDAAILFSDIVVPLKAAGVKVDIVPGRGPVMEQAVRSREDVGKLPLLEAD-- 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + + I+ + +L LIGF GAP+T+ASY+I GG K+H + + + + ++
Sbjct: 118 -VPEVTEGIARILAELTETQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHADPETWH 176
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L +L Q+ AG+D +Q+FD+ AG L E ++ + I++ V
Sbjct: 177 MLMRRLVPTITRFLQVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSREILAGV----- 231
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F G G +L S +G+D+ VP+ A E +QGNLDP L G+
Sbjct: 232 EIPRIHFGVGTGELLPAMSE-AGSEVMGVDYRVPMDAAAERVSARVLQGNLDPAMLFAGD 290
Query: 299 QVMIDGVNAI---LDVLGSG----PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V I +D I+NLGHG+ P D + + V + E
Sbjct: 291 DAVRQAVRTIRGEVDRARERGDIDGHIWNLGHGVLPTTDAEAITRAVSIIHEE 343
>gi|328850729|gb|EGF99890.1| hypothetical protein MELLADRAFT_50583 [Melampsora larici-populina
98AG31]
Length = 379
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 127/365 (34%), Positives = 190/365 (52%), Gaps = 27/365 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ G P+W+MRQAGRYLPE+R++R+ +F ++C TP E+T+QPI
Sbjct: 12 KNDLLIRAASGKPTERSPVWVMRQAGRYLPEFRKLRES-HDFFEICRTPTLATEITMQPI 70
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT---QEIYLLNPNIDLFL 117
+RY DAAI+FSDILVI AL V GP +PI T + + P ++ L
Sbjct: 71 KRYKGLLDAAIIFSDILVIPQALDMEVIMKP--GPIFPNPIQTNQEMKDMINKPIDEIEL 128
Query: 118 -NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L ++ +I + + L N I LIGF GAPWT+ +YM SGG + + ++
Sbjct: 129 KSKLQYVYDAIELTVEALDNEIPLIGFVGAPWTLFAYMTSGGSATSFDTAKKWLFEEPEL 188
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL+ LS V + +L+ QI +G VIQ+FD+ AG L ++F+ ++ + ++ V+
Sbjct: 189 SIQLLEKLSIVCSIHLLLQIKSGCQVIQVFDSWAGELNSYDFKKFSLPFLIQVGKLVKEG 248
Query: 237 -----YPNAKFISFAKGAGYM--LKNYRRLTDSNAIGLDWSVPLSFALELQK----EGPV 285
P I FAKGA LK+ +D IGLDW + FA++ + + +
Sbjct: 249 LIKENLPIVPMIVFAKGANQSNQLKSLSE-SDYTTIGLDWKIEPEFAIKSLESNSTKIAL 307
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSG-----PFIFNLGHGITPQVDPKNVLDLVKT 340
QGNLDP L + V + D G P I NLGHGITP VDP+ + ++
Sbjct: 308 QGNLDPAILHSSPDSIKRYVKLMFDKSNGGFRGDLPHIANLGHGITPGVDPECMRAFLEA 367
Query: 341 VRSEK 345
V E
Sbjct: 368 VHEES 372
>gi|220921274|ref|YP_002496575.1| uroporphyrinogen decarboxylase [Methylobacterium nodulans ORS 2060]
gi|219945880|gb|ACL56272.1| uroporphyrinogen decarboxylase [Methylobacterium nodulans ORS 2060]
Length = 360
Score = 368 bits (944), Expect = e-100, Method: Composition-based stats.
Identities = 150/350 (42%), Positives = 204/350 (58%), Gaps = 13/350 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL G ++PPP W+MRQAGRYLPEYR++R K +FLD+CYTP++ E+TLQPIRR
Sbjct: 12 RPVLRVLGGEALSPPPAWMMRQAGRYLPEYRELRAKAGSFLDLCYTPDFATEVTLQPIRR 71
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLPI 123
+ F+AAILFSDILV+ ALG+ VRFVE EGPR+D + L + +L P+
Sbjct: 72 FGFEAAILFSDILVVPHALGQEVRFVEGEGPRLDALADRAAFAGLREAGDPRIMAHLAPV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++S LR LP TL+GFCGAPWTVASYMI G D R A ++ L+D
Sbjct: 132 FETVSRLRAALPRETTLLGFCGAPWTVASYMIGGRGTPDLAPARDLAGRDPALLAALIDR 191
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE-------HEFENYAARSVGRIISAVRRK 236
L VS +YL+ Q AG D +QIF++H G L ++ + RI+S VR +
Sbjct: 192 LVAVSTDYLVRQFEAGADAVQIFESHGGTLPAVPAGEAGDALARWSLEPIARIVSGVRAR 251
Query: 237 YPNAKFISFAKGAG--YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMR 293
P A+ I F +G G + T ++A+G+DW V L+ V QGNL P
Sbjct: 252 VPGARIIVFPRGTGLDGHARALAE-TGADAVGVDWEVDLAALRGRLPGRAVTQGNLHPQT 310
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L+ G + V+AIL P IFNLGHGITP+ +V ++ +R
Sbjct: 311 LIAGGAALDAAVDAILAATAGLPHIFNLGHGITPETPIPHVERMLARLRG 360
>gi|219871004|ref|YP_002475379.1| uroporphyrinogen-III decarboxylase [Haemophilus parasuis SH0165]
gi|219691208|gb|ACL32431.1| uroporphyrinogen-III decarboxylase [Haemophilus parasuis SH0165]
Length = 308
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 156/305 (51%), Gaps = 7/305 (2%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ 104
+ +C + E+T+QP+RRY DAAILFSDIL I DA+G + F EGP+ PI +
Sbjct: 1 MSLCRNADLACEVTIQPLRRYALDAAILFSDILTIPDAMGLGLSFGAGEGPKFARPIERK 60
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
P D L + ++ +R++L + LIGF G+PWT+A+YM+ GG K
Sbjct: 61 ADVDHLPIPDPE-QELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFT 119
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
+ + Y + LLD L+D YL AQI AG + +FDT G L ++ ++ R
Sbjct: 120 KIKKMMYAEPALLHALLDKLADSVILYLNAQIKAGSQSVMVFDTWGGVLAHRDYNEFSLR 179
Query: 225 SVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQK 281
+ +I+ + R+ F KG G L+ T +A+GLDW+V ++ A +
Sbjct: 180 YMHKIVDGLIRENDGRKVPVTLFTKGGGLWLEAIAD-TGCDAVGLDWTVDIADARRRVGH 238
Query: 282 EGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKT 340
+ +QGN+DP L + + V AIL G G +FNLGHGI V ++ V +
Sbjct: 239 KVALQGNMDPSVLYASPERIEQEVKAILAGFGQGSGHVFNLGHGIHQDVPIESPKVFVDS 298
Query: 341 VRSEK 345
V +
Sbjct: 299 VHAFS 303
>gi|254444527|ref|ZP_05058003.1| uroporphyrinogen decarboxylase [Verrucomicrobiae bacterium DG1235]
gi|198258835|gb|EDY83143.1| uroporphyrinogen decarboxylase [Verrucomicrobiae bacterium DG1235]
Length = 345
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 131/347 (37%), Positives = 195/347 (56%), Gaps = 8/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + Q+ L L ++ PPIW+MRQAGRYLPEYR +++K+ +FL + TPE +E+T+
Sbjct: 1 MNSK-QRFLAALDCQPLDRPPIWVMRQAGRYLPEYRALKEKY-SFLQLAQTPELALEVTM 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RR+ DAAILFSDILVI +A+G+ F E G MD + D L
Sbjct: 59 QPLRRFPLDAAILFSDILVIPEAMGQGYHFREQGGIGMDYTLESRAQIEKLTTDTIEEKL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q++ ++ +L L+GF G+PWT+A+YM+ GG K+ + + YQ+ F L
Sbjct: 119 DYVAQALRLIDAELDGSKMLLGFGGSPWTLATYMLEGGSSKNFSKVKALFYQDRATFELL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ +SD Y Q AG D IQIFD+ G L H++E + + + +II AVR +
Sbjct: 179 MEKISDALITYFRMQKAAGADAIQIFDSWGGILAGHDYEAASLKWIRKIIDAVREE---I 235
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQ 299
I +AKG L + AI +DW++P+ A ++ +QGNLDP+ L
Sbjct: 236 PMIIYAKGTAPQLARQAACS-PKAIAVDWTIPIEEAANQVPSHIAIQGNLDPVLLDTEPS 294
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ + ILD + S P IFNLGHGI P +N+ LV+TV +
Sbjct: 295 IVRENTQRILDAMKSRPGHIFNLGHGILPTARIENMETLVETVTTWS 341
>gi|172040595|ref|YP_001800309.1| uroporphyrinogen decarboxylase [Corynebacterium urealyticum DSM
7109]
gi|171851899|emb|CAQ04875.1| uroporphyrinogen decarboxylase [Corynebacterium urealyticum DSM
7109]
Length = 373
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 126/352 (35%), Positives = 190/352 (53%), Gaps = 21/352 (5%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
L ++G+ + P+W+MRQAGR LPEYR++R+ LD C+ P+ E+T+QP+ R+
Sbjct: 27 PYLAAVRGDKPSRRPVWMMRQAGRSLPEYRKVREGIP-MLDSCFMPDLLAEITMQPVIRH 85
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ DAAILFSDI+V A G +V V GP M + + T E P+++ + L PI +
Sbjct: 86 DADAAILFSDIVVPLKAAGMDVEIVAGRGPVMGEAVRTSEQIANIPDLE--PDQLGPIVE 143
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I + ++L LIGF GAP+TVASY+I GG K+H + Y + ++ L++ LS
Sbjct: 144 GIEQILERLRTDQVLIGFAGAPFTVASYLIEGGPSKNHEVTKAMMYAEPQLWHALMEKLS 203
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ A +L AQI AGVD IQ+FD+ AG L ++ Y A +I+ AVR F
Sbjct: 204 PMIAHFLQAQIEAGVDAIQLFDSWAGFLTARDYREYVAPYSQKILDAVRPY--GIPMTHF 261
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-------QKEGPVQGNLDPMRLVVGN 298
G G +L + ++ + +G+DW VP++ A + Q QGNLDP L G
Sbjct: 262 GVGTGELLVDLAKV-GPDVVGVDWRVPMNVAAKRVQQALPDQTPKAYQGNLDPAVLFAGR 320
Query: 299 QVMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ + V I +++ S IFNLGHG+ P D + + V +
Sbjct: 321 DVIREHVKRIAAEAYEAIELGYSRGHIFNLGHGVMPHTDADAITAAFEEVHN 372
>gi|322697618|gb|EFY89396.1| uroporphyrinogen decarboxylase [Metarhizium acridum CQMa 102]
Length = 339
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 113/336 (33%), Positives = 173/336 (51%), Gaps = 19/336 (5%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVI 80
W+MRQAGRYLPEY + + ++F + C PE LTLQP+ R+ DAAI+FSDILVI
Sbjct: 2 WVMRQAGRYLPEYHEAK-GNRDFFECCRDPEVASTLTLQPVERFAGLLDAAIIFSDILVI 60
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLFLNYLLPIFQSISILRKKLP 135
A+G V V+ +GP +P+ T E +L ++ + L ++++I++ RKK+
Sbjct: 61 PQAMGMQVEMVDKKGPHFPNPLKTPEDGQYDQVLKKDVQVA-EELDYVYKAITLTRKKIA 119
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LIGFCGAPWT+ YM+ GG K Q++ + Y+ LL ++D+ ++L Q
Sbjct: 120 GRVPLIGFCGAPWTLFCYMVEGGGTKLFAQSKTWIYKYPEESKKLLSKIADICVDHLARQ 179
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YPNAKFISFAKGAG 250
+ AG ++ +FD+ AG L F ++ + I + K F KGA
Sbjct: 180 VEAGAQMVMVFDSWAGELSPSSFREFSEPYLLHIAQKLPSKLKSLGLDRVPMTVFPKGAW 239
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNLDPMRLVVGNQVMIDGVNAI 308
Y L + L N +G+DW + AL ++ QGN DP L + + V +
Sbjct: 240 YALDSVCNL-GYNVVGMDWLQDPAAALRIRGSRNVVFQGNADPGVLYGTKEAITLAVEQM 298
Query: 309 LDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ +I NLGHGITP VDP N+ + +
Sbjct: 299 VKGFWAAKKGWIANLGHGITPGVDPDNLKHFFEEIH 334
>gi|308068453|ref|YP_003870058.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa E681]
gi|305857732|gb|ADM69520.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa E681]
Length = 348
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + ++ P+W MRQAGRY PEYR+I++K+ L++C PE E+TL P+R
Sbjct: 4 NDTFIRACRKQAVDHIPVWYMRQAGRYDPEYRKIKEKY-TLLEICRQPELAAEVTLMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ +LG + V+N GP + +PI + ID+ + L I
Sbjct: 63 KLGVDAAILYSDIMNPVASLGVDFDIVKNIGPVIDNPIRSAADVDKLRPIDVERD-LGHI 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL ++L ++ LI F GAP+T+ASY+I G K + + + Y ++ L+D
Sbjct: 122 LETIRILDREL--NVPLITFAGAPFTIASYLIEGRPSKGYIRTKAMMYGEPELWHRLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ Y+ A I G Q+FD+ G L ++F+ + ++ RI + + I
Sbjct: 180 LGDMVITYVRAHIANGGKAFQLFDSWVGALSPYDFQTFVLPTITRIFHELSDL--DVPKI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMI 302
F + L + ++ IGLDW V + G VQGNLDP L V+
Sbjct: 238 YFPGVSSGELLPHLNGLKADVIGLDWRVSIPEGRRRLGNGFGVQGNLDPYVLTAPIDVIK 297
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D +IFNLGHG+ P+ + +L + V
Sbjct: 298 QYAKKIIDEGILEPGYIFNLGHGLFPEASLDKLRELTEYVHEYS 341
>gi|260906567|ref|ZP_05914889.1| uroporphyrinogen decarboxylase [Brevibacterium linens BL2]
Length = 348
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 121/341 (35%), Positives = 178/341 (52%), Gaps = 10/341 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L L+G I P+W MRQAGR LPEYR++R LD C TPE E+TLQP+RR
Sbjct: 3 STLLPALRGEQIAHTPVWFMRQAGRSLPEYRELRAGTA-MLDACRTPELVSEITLQPVRR 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAI FSDI+V A G +V V GP + +PI ++ +N +L + I
Sbjct: 62 HGVDAAIFFSDIVVPLQAAGVDVEIVPGTGPVIANPIRSRAD--VNALAELEPEQIPDIA 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+SI + ++L LIGF GAP+T+ASY+I GG K+H + + + F+ LL L
Sbjct: 120 ESIGRILEELGQETPLIGFAGAPFTLASYLIEGGPSKNHEKTKSLMASDPETFSLLLSKL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ +S+ +L Q+ AG Q+FD+ AG L ++E + + ++R + I
Sbjct: 180 ARISSTFLDVQLGAGASAFQLFDSWAGYLSRRDYEAHVVEHSSAVFESLR--HHEVPSIH 237
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F G +L + R S A+G+D+ V L A +Q P+QGNLDP L + +
Sbjct: 238 FGVQTGELLTSMSR-AGSTAVGVDFRVDLDDASTRVQPGQPLQGNLDPALLFAPWEALAP 296
Query: 304 GVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ I+ F+FNLGHG+ P DP +V V
Sbjct: 297 RIEEIVKQGLNHEAGFVFNLGHGVLPYTDPDVPGRIVDEVH 337
>gi|15613765|ref|NP_242068.1| uroporphyrinogen decarboxylase [Bacillus halodurans C-125]
gi|20138005|sp|Q9KDL0|DCUP_BACHD RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|10173818|dbj|BAB04921.1| uroporphyrinogen III decarboxylase [Bacillus halodurans C-125]
Length = 344
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 179/345 (51%), Gaps = 7/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N L+ +G V + P+W MRQAGR PEYR+I++K+ + ++ PE +T
Sbjct: 3 NSFNDTFLKACKGEVHDHVPVWYMRQAGRSQPEYRKIKEKY-SLFEITKQPELCAYVTKL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ +YN DAAIL+ DI+ +G +V +GP +D + +
Sbjct: 62 PVDQYNNDAAILYKDIMTPLPFIGVDVEIKTGKGPVIDNPIQSYADVERLGTIQPEEDVP 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I +LR++L + LI F GAP+T+ASYMI GG K + + + F Y +A++ L+
Sbjct: 122 YVLDTIKLLREQL--TVPLISFAGAPFTLASYMIEGGPSKSYNKTKAFMYAEPKAWHLLM 179
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L +++ Y+ AQI AG IQIFD+ G L ++ + + R S ++++
Sbjct: 180 DKLGEMTITYVKAQIAAGAQAIQIFDSWVGTLNVQDYRVFVKPVMERTFSELQKE--KVP 237
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F GA +++ + L + +GLDW + + A EL VQGNLDP L+ +V+
Sbjct: 238 LIMFGVGASHLVNEWNDLP-LDVVGLDWRLQIKEARELGVTKTVQGNLDPAILLAPWEVI 296
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
ILD P FIFNLGHG+ P+V+P + L V
Sbjct: 297 EARAKEILDQGLETPNFIFNLGHGVFPEVEPDTLKRLTAFVHEYS 341
>gi|195953573|ref|YP_002121863.1| uroporphyrinogen decarboxylase [Hydrogenobaculum sp. Y04AAS1]
gi|226723875|sp|B4U9S4|DCUP_HYDS0 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|195933185|gb|ACG57885.1| uroporphyrinogen decarboxylase [Hydrogenobaculum sp. Y04AAS1]
Length = 347
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 122/343 (35%), Positives = 192/343 (55%), Gaps = 8/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+ L+ I P+WLMRQAGRYLPEYR IR+K+K+FLD C E ++LQP+
Sbjct: 2 KNDIFLKSLKKEPIARYPVWLMRQAGRYLPEYRAIRQKYKSFLDFCKNVEDAAIVSLQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DA I+FSDILV+ + +G V F EGP +D N L +
Sbjct: 62 DILGVDAVIMFSDILVLLEPMGIKVSFEAGEGPVLD----HNFDFKNLKSQGISGDLSYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+ + +L++K P + +IGFCGAP+T+ASY+I +D + +VF Y+N + F+ L++
Sbjct: 118 FELLKVLKEKSP--VPVIGFCGAPFTLASYVIEKESSRDFTKTKVFMYENQKDFHILMEK 175
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS+ EY+ QI +G DVIQIFD+ + L ++ Y II ++++K+PN I
Sbjct: 176 LSEALVEYIDHQIKSGADVIQIFDSWSMSLSRFAYKEYVYDYNAFIIKSIKQKHPNTPII 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F +G+ +++ L ++A+ +DWSV ++ + + QGNL+P L++ + +
Sbjct: 236 YFFRGSSSHIEDAVDL-GADALSVDWSVCINDVCKRYPDLVFQGNLEPQILLLDKENIRK 294
Query: 304 GVNA-ILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V ++ + F+ NLGHGITP V NV V+ V+
Sbjct: 295 HVEEFVMCIPRDTAFVVNLGHGITPDVSKDNVKYFVECVKEVS 337
>gi|229183377|ref|ZP_04310604.1| Uroporphyrinogen decarboxylase [Bacillus cereus BGSC 6E1]
gi|228600093|gb|EEK57686.1| Uroporphyrinogen decarboxylase [Bacillus cereus BGSC 6E1]
Length = 328
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 109/327 (33%), Positives = 177/327 (54%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G +V GP + +PI + + I+ + + I +I +L ++ + +
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VP 118
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 119 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 178
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 179 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTL--GVPMIMHGVGAAHLVNEWHDL 236
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD + +I
Sbjct: 237 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 295
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHG+ P+V+P + L +
Sbjct: 296 FNLGHGVFPEVNPDTLKRLTTFIHEYS 322
>gi|284104496|ref|ZP_06386142.1| Uroporphyrinogen decarboxylase [Candidatus Poribacteria sp. WGA-A3]
gi|283830196|gb|EFC34450.1| Uroporphyrinogen decarboxylase [Candidatus Poribacteria sp. WGA-A3]
Length = 320
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 116/324 (35%), Positives = 171/324 (52%), Gaps = 9/324 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRY+ EY+++R K LD+C TP+ E+TLQPI R++ DAAI+F+DIL+ + +
Sbjct: 1 MRQAGRYMAEYQRMRAKHG-ILDVCKTPDLAAEVTLQPIERFDLDAAIIFADILLPLEPM 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G + F E EGP + +P+ Q+ ++ + ++S+ +K L + LIGF
Sbjct: 60 GLQLTFREEEGPVILNPVRHQDDVTRLRPVER--DAFRFSSDAVSLTKKALDGRVPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY I GG +++ + + ++ LL SDV YL QI AGVD +
Sbjct: 118 AGAPFTLASYAIEGGSSRNYLNTKQMMFGRPDQWHALLRKFSDVVVTYLENQIRAGVDAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ GCL ++ Y V II ++ + I F G +L R S+
Sbjct: 178 QIFDSWVGCLTPADYGEYVLPHVQTIIDRLKPE--GIPIIYFGTGTSTLLPLM-RSAGSD 234
Query: 264 AIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNL 321
+GLDW V L A + + VQGNLDP+ L + + ILD G+ IFNL
Sbjct: 235 VLGLDWHVELDEAWARVGFDVAVQGNLDPVVLFAPLPEIERRIKDILDRAGNRAGHIFNL 294
Query: 322 GHGITPQVDPKNVLDLVKTVRSEK 345
GHGI P+ +V + V
Sbjct: 295 GHGILPKTPVDHVESAIGFVHQYS 318
>gi|228913753|ref|ZP_04077379.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228926221|ref|ZP_04089296.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228932465|ref|ZP_04095346.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|229090126|ref|ZP_04221376.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-42]
gi|229120694|ref|ZP_04249937.1| Uroporphyrinogen decarboxylase [Bacillus cereus 95/8201]
gi|228662699|gb|EEL18296.1| Uroporphyrinogen decarboxylase [Bacillus cereus 95/8201]
gi|228693203|gb|EEL46914.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-42]
gi|228827155|gb|EEM72908.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228833474|gb|EEM79036.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228845945|gb|EEM90970.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 328
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 109/327 (33%), Positives = 177/327 (54%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G +V GP + +PI + + I+ + + I +I +L ++ + +
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VP 118
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 119 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAG 178
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 179 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 236
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD + +I
Sbjct: 237 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 295
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHG+ P+V+P + L +
Sbjct: 296 FNLGHGVFPEVNPDTLKRLTTFIHEYS 322
>gi|256825387|ref|YP_003149347.1| uroporphyrinogen decarboxylase [Kytococcus sedentarius DSM 20547]
gi|256688780|gb|ACV06582.1| uroporphyrinogen decarboxylase [Kytococcus sedentarius DSM 20547]
Length = 369
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 10/343 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ +G + P+W MRQAGR LPEYR +R+ L+ C TPE E+TLQP+RR
Sbjct: 32 PTLVAAARGQEVPHTPVWFMRQAGRSLPEYRALREG-NAMLEACRTPELCTEITLQPVRR 90
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAAI FSDI+V ALG ++ V GP + +P T+ P + + + I
Sbjct: 91 HDVDAAIFFSDIVVPLHALGVDLDIVPGTGPVVAEPFRTRADLDRLPGLTADM--VPDIS 148
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+SI+ +R L LIGF GAP+T+ASY++ GG K+H + + + + +N + L
Sbjct: 149 ESIAAVRSALRPDQALIGFAGAPFTLASYLVEGGPSKNHERTKALMHGDPELWNDFCERL 208
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ ++ +L Q+ AG D +Q+FD+ G L +++ + A +A+ I
Sbjct: 209 ASIAGAFLQVQVDAGADAVQLFDSWVGYLNRADYQRFVAPHSA---AALASVAGRVPRIH 265
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
F G G +L + + +G+D+ V L+ ALE +QGNLDP L ++ ++
Sbjct: 266 FGVGTGELLDLMGQ-AGAEVVGVDYRVDLADALERTGGRYALQGNLDPALLFAPDEPLMA 324
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I++ + +FNLGHG+ P DP + + V
Sbjct: 325 RVDEIVEAGRVAPGHLFNLGHGVLPSTDPDVLTRVTARVHETS 367
>gi|57238748|ref|YP_179884.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578669|ref|YP_196881.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|57160827|emb|CAH57725.1| uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417295|emb|CAI26499.1| Uroporphyrinogen decarboxylase [Ehrlichia ruminantium str.
Welgevonden]
Length = 335
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 143/323 (44%), Positives = 203/323 (62%), Gaps = 4/323 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
PIW MRQAGRYLPEY++I K +FL+MCY PE E+TLQPI+R+N DAAI+FSDILVI
Sbjct: 15 PIWFMRQAGRYLPEYQKIAKNAPSFLEMCYNPEIVKEITLQPIKRFNLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F +++GP + I++ + N + L++L +FQSI +R+ L L
Sbjct: 75 PDALGCKVTFTKDKGPELKEISS-YQEINNISNSEILSHLSNVFQSIKEVRQCLHKDKAL 133
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF G PWTVA+YMI G K+ + + Y +R ++D +++V+ YLI QI +GV
Sbjct: 134 IGFAGGPWTVATYMI--GRDKNFSKIKEMCYIKNRNLEKIIDKITEVTISYLIKQIESGV 191
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
+V+QIFD++AG L EFE + IIS+VR+ YP+ FI F KGAG + K + + T
Sbjct: 192 NVLQIFDSNAGVLSCEEFERWIINPTKEIISSVRKTYPDFPFIGFPKGAGVLYKKFTQET 251
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ + +D+SVP+ +A E +QGN+DP L + I I++++ P IFN
Sbjct: 252 NVSVTSIDYSVPMFWAKENIPSI-IQGNIDPYLLAYDKEGAISQAKKIINIMKEEPLIFN 310
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHGI P +NV LV+ V+S
Sbjct: 311 LGHGIIPSTPVENVQALVEFVKS 333
>gi|320166787|gb|EFW43686.1| uroporphyrinogen decarboxylase [Capsaspora owczarzaki ATCC 30864]
Length = 397
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 28/360 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R +L + P+W MRQAGRYLPE+R++R + +F +C TP+ E+TLQP+
Sbjct: 42 RNDLLLRAARHQPTERVPVWAMRQAGRYLPEFREMRAE-SDFFKVCRTPQLACEVTLQPL 100
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG +V ++ +GP +P+ T E L
Sbjct: 101 RRFELDAAIIFSDILVVPQALGMHVDMIKGKGPSFPEPLNTPEDLARVKTEVNVDEALGY 160
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTV-----ASYMISGGFIKDHGQNRVFAYQNSRAF 177
+F ++++ R L + L GF GAP V + + G + + + ++ A
Sbjct: 161 VFDALTLTRHSLDGLVPLFGFAGAPQNVRQGENLALQVPRGIARAF--AKTWLFKYPEAS 218
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ LL ++ V+ + AG ++Q+FD+ AG L EF +A + +I V+R
Sbjct: 219 HELLRRITTVT-------MRAGAQILQVFDSWAGELSPTEFAQFALPYLKQIAVEVKRAC 271
Query: 238 -------PNAKFISFAKGAGYMLKNYRRLT---DSNAIGLDWSVPLSFALELQ--KEGPV 285
+ FAKGA + L+ + +GLDW++P A V
Sbjct: 272 VEQLGMTEAVPMVVFAKGAHFALEELASPATGGGYDVVGLDWTMPPQSARARVASSGVAV 331
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
QGNLDP L + + V ++L G+ +I NLGHG+ P+ P+ + V V +
Sbjct: 332 QGNLDPCVLFAPHSQIEAQVTSMLAQFGTQNYIANLGHGMMPEHSPEALRCFVDAVHAVS 391
>gi|15806153|ref|NP_294857.1| uroporphyrinogen decarboxylase [Deinococcus radiodurans R1]
gi|6458871|gb|AAF10707.1|AE001963_2 uroporphyrinogen decarboxylase [Deinococcus radiodurans R1]
Length = 392
Score = 366 bits (939), Expect = 3e-99, Method: Composition-based stats.
Identities = 115/345 (33%), Positives = 176/345 (51%), Gaps = 9/345 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
R L+ +G P+W MRQAGRY+PEYR +R K L+ TP+ E+TLQPI
Sbjct: 50 RDSAFLKTARGEQAPYTPVWFMRQAGRYMPEYRALRAG-KTMLECIRTPDLAAEITLQPI 108
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
+ DAAILF+DIL +G ++ FV GP + +PI T + + + +
Sbjct: 109 KAMPLDAAILFNDILTPLPTMGLSLDFVGGVGPVIHNPINTPKDVDVL-GVPATAETMPY 167
Query: 123 IFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+SI +L +L + I LIGF GAP+T+ASY I G +++ + + F Y A+ L+
Sbjct: 168 TAESIRLLMPELNSRGIPLIGFVGAPFTLASYAIEGKGSRNYEKTKRFMYAEPAAWARLM 227
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
V A+YL Q+ AG +QIFD+ G L ++++ + + +I V++
Sbjct: 228 GKFESVLADYLTEQVKAGASAVQIFDSWVGALSVYDYQTFVKPATAGLIERVKKL--GVP 285
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQV 300
I F GA +++ + L S+ +G DW PL A +L Q +QGNLDP+ L +
Sbjct: 286 VIYFGTGATHLMPDMASL-GSDVMGADWRTPLDKAWDLIQPGQSIQGNLDPLLLQAPWRE 344
Query: 301 MIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + IL G IFN+GHG+ P+ V L V +
Sbjct: 345 LKHQTDRILHEANGRPGHIFNVGHGLLPETPQDMVHRLTDYVHEQ 389
>gi|118467722|ref|YP_887111.1| uroporphyrinogen decarboxylase [Mycobacterium smegmatis str. MC2
155]
gi|166234256|sp|A0QW23|DCUP_MYCS2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|118169009|gb|ABK69905.1| uroporphyrinogen decarboxylase [Mycobacterium smegmatis str. MC2
155]
Length = 353
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 117/358 (32%), Positives = 183/358 (51%), Gaps = 21/358 (5%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W MRQAGR LPEYR++R + + L C+ E
Sbjct: 1 MNTRRELPESPYLAAASGRSPHRVPVWFMRQAGRSLPEYRELRAQHR-MLQACFDAELVC 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+T+QP+RR+ DAAILFSDI+V A G + V + GP +D PI T P ++
Sbjct: 60 EITMQPVRRHKVDAAILFSDIVVPLKAAGIGLDIVPDVGPVIDNPIRTLGDVQAMPALE- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ +++ +L +L + LIGF GAP+T+ASY++ GG + H + + S
Sbjct: 119 -SPQVAPVAEAVRLLTAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHERTKAMMLGESS 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+D++ +L AQ+ AGVD +Q+FD+ AG L ++ Y R+ + +
Sbjct: 177 TWHALMTALTDLTIAFLQAQVDAGVDALQVFDSWAGTLSLTDYREYVLPHSSRVFATMAA 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRL---TDSNAIGLDWSVPL-SFALELQKEGPVQGNLDP 291
F G +L + +G+DW L A + +QGNLDP
Sbjct: 237 A--GVPMTHFGVGTAELLGAMSEALAPGAARVVGVDWRTSLADAAARVLPGAALQGNLDP 294
Query: 292 MRLVVGNQVMIDGVNAILDV------LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ L+ G V+ V +++ G+ IFNLGHG+ P DP + D V+ V S
Sbjct: 295 VVLLAGWPVVEKAVRRVVEDGRAAVAAGAAGHIFNLGHGVLPATDPGIITDAVELVHS 352
>gi|307104819|gb|EFN53071.1| hypothetical protein CHLNCDRAFT_32323 [Chlorella variabilis]
Length = 396
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 93/344 (27%), Positives = 162/344 (47%), Gaps = 8/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L L+G + PP+W+MRQAGRY+ Y+++ KK F + + VE++LQP R
Sbjct: 50 EPLLLRALRGEEVERPPVWMMRQAGRYMKVYQELCKKHTTFRERSENADIAVEVSLQPWR 109
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNYLLP 122
+ D ILFSDIL + + +GP + DPI T E + + P + +
Sbjct: 110 AFQPDGVILFSDILTPIAGMNIPFDIDKGKGPVIADPIRTMEAVDRVTPLVPEDC--VPF 167
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ Q++ LR ++ T++GF GAP+T+A+Y++ GG K++ Q + + + LL
Sbjct: 168 VGQALRRLRAEVGGASTVLGFVGAPFTLATYIVEGGMSKNYVQIKKLMFTEPEVLHALLQ 227
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D Y+ Q G V+QIFD+ A L +F+ + + II+ +++ P+
Sbjct: 228 KLADAVVTYIKYQHDNGAQVVQIFDSWAAQLSPQDFDIWCGPYIKYIIAEAKKQCPDLPI 287
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
I + +G +++ + + I L +V + + QGN+D L + ++
Sbjct: 288 ILYISNSGALVERMAA-CNPDIISLCHTVDMKEGIRRAGTQFAYQGNMDSGVLFGSHDMI 346
Query: 302 IDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V I NLGHGI +N K +
Sbjct: 347 EQRVRETAKAAKEMGVRHIMNLGHGIMQGTPEENAAHFFKVAKE 390
>gi|65318454|ref|ZP_00391413.1| COG0407: Uroporphyrinogen-III decarboxylase [Bacillus anthracis
str. A2012]
Length = 328
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 109/327 (33%), Positives = 177/327 (54%), Gaps = 8/327 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+
Sbjct: 2 PAWYMRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSP 60
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
A+G +V GP + +PI + + I+ + + I +I +L ++ + +
Sbjct: 61 LPAIGVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VP 118
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG
Sbjct: 119 LIGFSGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDKLADMVITYLKAQINAG 178
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+QIFD+ G + ++ + ++ RI + VR I GA +++ + L
Sbjct: 179 AKAVQIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDL 236
Query: 260 TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFI 318
+ +GLDW +P+ A VQGN+DP L+ V+ + V ILD + +I
Sbjct: 237 P-LDVVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYI 295
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHG+ P+V+P + L +
Sbjct: 296 FNLGHGVFPEVNPDTLKRLTTFIHEYS 322
>gi|25027014|ref|NP_737068.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
gi|23492294|dbj|BAC17268.1| putative uroporphyrinogen decarboxylase [Corynebacterium efficiens
YS-314]
Length = 383
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 181/351 (51%), Gaps = 19/351 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L+ G P+W MRQAGR LPEY ++R+ + LD C+ PE E+T+QP+R
Sbjct: 39 NAPLLDAAHGKTPTRTPVWFMRQAGRSLPEYLKVREGI-SMLDSCFMPELLAEITMQPVR 97
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G V V GP MD P+ T+ P +D + +
Sbjct: 98 RHDVDAAILFSDIVVPLRAAGVGVEIVPGRGPVMDQPVRTRADIDNLPILDHE---VTEV 154
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ISI+ +L + LIGF GAP+T+ASY++ GG K+H + + + ++ L++
Sbjct: 155 SKGISIILDELTDTQALIGFAGAPFTLASYLVEGGPSKNHERTKAMIHAEPETWHALMER 214
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L +L QI AG+D +Q+FD+ AG L E ++ + RI+ V + I
Sbjct: 215 LVPTVVNFLKTQIDAGIDAMQLFDSWAGFLTERDYTEHVLPYSTRILQEVEQY--QLPRI 272
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVVGNQ 299
F G G +L R S +G+DW VPL A E + +QGNLDP L G +
Sbjct: 273 HFGVGTGELLGAMSR-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGTE 331
Query: 300 VMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +N I + + IFNLGHG+ P +N+ + V + +
Sbjct: 332 PLTREINRIKGEAAAAIAAGNATGHIFNLGHGVLPNTVAENITEAVSIIHA 382
>gi|50547735|ref|XP_501337.1| YALI0C01716p [Yarrowia lipolytica]
gi|49647204|emb|CAG81636.1| YALI0C01716p [Yarrowia lipolytica]
Length = 370
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 109/360 (30%), Positives = 183/360 (50%), Gaps = 23/360 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G + PP+W+MRQAGRYLPEY ++ K ++F + C P+ E+T+QPI
Sbjct: 8 KNDLILRAARGEKVERPPVWMMRQAGRYLPEYHVVKGK-RDFFETCRDPKIAAEITIQPI 66
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLNY 119
+ D AI+F+DILVI ALG V V+ GP +P+ T E I L + ++ +
Sbjct: 67 EHFPGLIDVAIIFNDILVIPQALGMTVEMVDKVGPHFPEPLRTPEDIKRLKKSSEVVIKD 126
Query: 120 -LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +I++ R +L + L GF GAP+T+ +YM+ GG + H + + Y+ +
Sbjct: 127 CLGWSLDAITLTRHQLDGRVPLFGFVGAPFTLLAYMLEGGSSRMHKWTKEWLYKYPEECH 186
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+L ++DV+ +YL Q+ AG ++Q+F++ G L EF+ Y+ V +I V +
Sbjct: 187 EVLQRITDVAVDYLAHQVIAGAQLLQVFESTGGELTPAEFKLYSLPYVKQIRDKVPARVK 246
Query: 239 ------------NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GP 284
+ + F + + Y L L + I LD S + A+++ +
Sbjct: 247 ELAGDEYDRKEHDVPMVFFPRNSWYALDACCDL-GYDVISLDSSWDPAEAVKVVGDRRVT 305
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
+QGNLDP + +++ V ++ G G +I N GHG P +DP+ V ++
Sbjct: 306 LQGNLDPGVIYGSREMITKKVEEMIAGFGGGKQNYIINFGHGTQPMMDPEQVGWFLEECH 365
>gi|83767798|dbj|BAE57937.1| unnamed protein product [Aspergillus oryzae]
Length = 378
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 107/355 (30%), Positives = 177/355 (49%), Gaps = 30/355 (8%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L + AGRYLPEY + + ++F + C +PE LT+Q
Sbjct: 36 SLKNDLLLRAAR--------------AGRYLPEYHEAKGG-RDFFECCRSPEIASTLTIQ 80
Query: 62 PIRRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ RY DAAI+FSDILVI A+G V V+ +GP +P+ + + + ++
Sbjct: 81 PVERYAGLIDAAIIFSDILVIPQAMGMQVEMVDKKGPHFPEPLKSPDDGQYEKVMQKQVD 140
Query: 119 ---YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L ++++I + R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ +
Sbjct: 141 VKEELDYVYKAIRLTRHKLQGRVPLIGFCGAPWTLLCYMVEGGGSKMFVQSKTWVYKYPK 200
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
LL ++++ EYL Q+ AG ++Q+FD+ AG L F++++ + I + + +
Sbjct: 201 ESQALLQKIAEICVEYLALQVAAGAQLVQVFDSWAGELSPASFKSFSLPYLRHISANLPK 260
Query: 236 KYPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNL 289
+ FAKGA Y L + + N +GLDW + A + +QGN
Sbjct: 261 RLKEMGLEPVPMTVFAKGAWYALDDLCE-SGYNVVGLDWLHDPAEARRIANGRVTIQGNA 319
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
DP L G + + V ++ G +I NLGHG+TP V P ++ + +
Sbjct: 320 DPGMLYGGRAAITETVETMVKGFEKGKQGWIANLGHGVTPFVKPDDLKFFFEEIH 374
>gi|114556206|ref|XP_001154586.1| PREDICTED: uroporphyrinogen decarboxylase isoform 5 [Pan
troglodytes]
Length = 341
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 108/302 (35%), Positives = 162/302 (53%), Gaps = 9/302 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 312
Query: 297 GN 298
Sbjct: 313 SE 314
>gi|259508504|ref|ZP_05751404.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
gi|29611771|sp|Q8FSD6|DCUP_COREF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|259163916|gb|EEW48470.1| uroporphyrinogen decarboxylase [Corynebacterium efficiens YS-314]
Length = 359
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 120/351 (34%), Positives = 181/351 (51%), Gaps = 19/351 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L+ G P+W MRQAGR LPEY ++R+ + LD C+ PE E+T+QP+R
Sbjct: 15 NAPLLDAAHGKTPTRTPVWFMRQAGRSLPEYLKVREGI-SMLDSCFMPELLAEITMQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAILFSDI+V A G V V GP MD P+ T+ P +D + +
Sbjct: 74 RHDVDAAILFSDIVVPLRAAGVGVEIVPGRGPVMDQPVRTRADIDNLPILDHE---VTEV 130
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ISI+ +L + LIGF GAP+T+ASY++ GG K+H + + + ++ L++
Sbjct: 131 SKGISIILDELTDTQALIGFAGAPFTLASYLVEGGPSKNHERTKAMIHAEPETWHALMER 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L +L QI AG+D +Q+FD+ AG L E ++ + RI+ V + I
Sbjct: 191 LVPTVVNFLKTQIDAGIDAMQLFDSWAGFLTERDYTEHVLPYSTRILQEVEQY--QLPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVVGNQ 299
F G G +L R S +G+DW VPL A E + +QGNLDP L G +
Sbjct: 249 HFGVGTGELLGAMSR-AGSEVMGVDWRVPLDKAAERIAAVSGPKVLQGNLDPALLFAGTE 307
Query: 300 VMIDGVNAI-------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +N I + + IFNLGHG+ P +N+ + V + +
Sbjct: 308 PLTREINRIKGEAAAAIAAGNATGHIFNLGHGVLPNTVAENITEAVSIIHA 358
>gi|157826384|ref|YP_001494104.1| uroporphyrinogen decarboxylase [Rickettsia akari str. Hartford]
gi|166234280|sp|A8GQC1|DCUP_RICAH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157800342|gb|ABV75596.1| uroporphyrinogen decarboxylase [Rickettsia akari str. Hartford]
Length = 338
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 127/326 (38%), Positives = 190/326 (58%), Gaps = 2/326 (0%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
N PIW MRQAGRYL EY+++R+ KNFLD CY E+TLQPI+RY FDAAI+FSDI
Sbjct: 13 NKIPIWFMRQAGRYLSEYKKVRETTKNFLDFCYDVNKATEVTLQPIKRYGFDAAIIFSDI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
LV+ A G + F EN GP + +QE + N L +++ I ++ L +
Sbjct: 73 LVLPHAFGWEIDFKENIGPILKQFKSQEDFKYL--QSNPNNKLGKVYEIIKKVKADLTST 130
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+LIGF G+PWTV SYM+ G D ++ F Y+N LL+F+++ +A++LI Q
Sbjct: 131 TSLIGFAGSPWTVMSYMLEGKGKHDFKTSKKFIYENKILAKELLNFITEKTADHLINQAK 190
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
+G DV+++FD+ +G L E EF + +II V+ +P I+F KGAG + + +
Sbjct: 191 SGADVLKLFDSWSGVLPEDEFTKFVIEPTKKIILKVKEVFPKIPMIAFPKGAGLLYEKFI 250
Query: 258 RLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
+ + + +D VPL + + VQGNLDP+ L+ +++ + I+ + F
Sbjct: 251 KEVPVDILAVDQMVPLEKMKKWSDKVIVQGNLDPVVLLTNKEIIKEKAYKIIQEMKGKNF 310
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI P+ P+NV L + +RS
Sbjct: 311 IFNLGHGILPKTPPENVEFLTECIRS 336
>gi|329940181|ref|ZP_08289463.1| uroporphyrinogen decarboxylase [Streptomyces griseoaurantiacus
M045]
gi|329301007|gb|EGG44903.1| uroporphyrinogen decarboxylase [Streptomyces griseoaurantiacus
M045]
Length = 353
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 176/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+ + + P+W MRQAGR LPEY ++R L+ C PE E+TLQP+R
Sbjct: 15 ESAFLKACRREPVPHTPVWFMRQAGRSLPEYHEVRAGIP-MLEACAMPELVAEITLQPVR 73
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAA+ +SDI+V A+G ++ GP + PI T+ L DL + +
Sbjct: 74 RHHVDAAVFYSDIVVPLKAIGVDLDIKPGVGPVVAQPIRTRAD--LAQLRDLTPEDVSYV 131
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ IL ++L LIGF GAP+T+ASY++ GG ++H + Y + + + LLD
Sbjct: 132 TEAMGILVRELGP-TPLIGFAGAPFTLASYLVEGGPSRNHEHTKALMYGDPQLWADLLDR 190
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + +++ +V I
Sbjct: 191 LAEIASAFLKVQIAAGASAVQLFDSWVGALSPADYRRSVFPASAKVLESVAGL--GVPRI 248
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+DW VPL A + +QGNLDP L V+
Sbjct: 249 HFGAGTGELLGL-LGEAGADVVGVDWRVPLDEAARRVGPGKALQGNLDPAILFAPTAVVE 307
Query: 303 DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+LD +FNLGHG+ P DP + LV+ V +
Sbjct: 308 AKAQEVLDAAAGLEGHVFNLGHGVLPATDPDALTRLVEYVHT 349
>gi|159482960|ref|XP_001699533.1| uroporphyrinogen-iii decarboxylase [Chlamydomonas reinhardtii]
gi|158272800|gb|EDO98596.1| uroporphyrinogen-iii decarboxylase [Chlamydomonas reinhardtii]
Length = 390
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 97/342 (28%), Positives = 160/342 (46%), Gaps = 6/342 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L ++G+ + PP+W+MRQAGRY Y+ + KK F + + VE++LQP
Sbjct: 47 DPLMLRAIRGDKVERPPVWMMRQAGRYQKVYQDLCKKHPTFRERSERVDLAVEISLQPWH 106
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D ILFSDIL + MDPI T +D +
Sbjct: 107 AFKPDGVILFSDILTPLPGMNIPFDMAPGP-IIMDPIRTMAQVEKVTKLDAEAA-CPFVG 164
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+S+ LR + N ++GF GAP+T+A+Y++ GG K+ + A+ + LLD L
Sbjct: 165 ESLRQLRTYIGNQAAVLGFVGAPFTLATYIVEGGSSKNFAHIKKMAFSTPEILHALLDKL 224
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D A+Y+ Q AG V+QIFD+ A L +F+ ++ + ++I +VR+ +P+ I
Sbjct: 225 ADNVADYVRYQADAGAQVVQIFDSWASELQPQDFDVFSGPYIKKVIDSVRKTHPDLPIIL 284
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
+ G+G +L+ + + I LD SV + ++ QGN+DP L +
Sbjct: 285 YISGSGGLLERMASCS-PDIISLDQSVDFTDGVKRCGTNFAFQGNMDPGVLFGSKDFIEK 343
Query: 304 GVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V + + NLGHG+ P +V R+
Sbjct: 344 RVMDTIKAARDADVRHVMNLGHGVLPGTPEDHVGHYFHVART 385
>gi|310641334|ref|YP_003946092.1| uroporphyrinogen decarboxylase [Paenibacillus polymyxa SC2]
gi|309246284|gb|ADO55851.1| Uroporphyrinogen decarboxylase [Paenibacillus polymyxa SC2]
Length = 351
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 110/344 (31%), Positives = 172/344 (50%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + ++ P+W MRQAGRY PEYR+I++K+ L++C PE E+TL P+R
Sbjct: 4 NDTFIRACRKQAVDHIPVWYMRQAGRYDPEYRKIKEKY-TLLEICRQPELAAEVTLMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ +LG + V+N GP + +P+ T ID+ + L I
Sbjct: 63 KLGVDAAILYSDIMNPVASLGVDFDIVKNIGPVIDNPLRTAADVDNLRPIDVERD-LGHI 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL ++L ++ LI F GAP+T+ASY+I G K + + + Y ++ L+D
Sbjct: 122 LETIRILDREL--NVPLITFAGAPFTIASYLIEGRPSKGYIRTKAMMYGEPELWHRLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ Y+ A I G Q+FD+ G L ++F+ + ++ RI + N I
Sbjct: 180 LGDMVITYVRAHIANGGKAFQLFDSWVGALSPYDFQTFVLPTIVRIFHELSDL--NVPKI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
F + L + ++ IGLDW V + L VQGNLDP L V+
Sbjct: 238 YFPGVSSGELLPHLSGVKADVIGLDWRVSIPEGRRRLGNSFGVQGNLDPYVLTAPMNVIK 297
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D +IFNLGHG+ P+ + +L V
Sbjct: 298 QYAKKIVDEGILEPGYIFNLGHGLFPEASLDKLRELTDYVHEYS 341
>gi|163782864|ref|ZP_02177860.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881985|gb|EDP75493.1| uroporphyrinogen decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 338
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 111/344 (32%), Positives = 184/344 (53%), Gaps = 10/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL ++ I P+WLMRQAGRY+ EYR++R + +NFL C + V+++L P+
Sbjct: 3 KNDLILRAVRQEPIERFPVWLMRQAGRYMKEYRELRAREENFLSFCKNVDLAVKVSLLPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DA I+FSDILV +ALG V F+E EGPR++ + + L +
Sbjct: 63 ELLGVDAVIIFSDILVPLEALGVKVEFLEGEGPRLE--WSGAVSDLKR---YDPEENAFV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ I ++K + + +IGF GAP+T+ASYMI G +D ++F + F L++
Sbjct: 118 YEIIRRVKKA-QDEVPVIGFAGAPFTLASYMIEGRSSRDFRNTKLFMWDREYEFKRLMEV 176
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D YL+ Q AG +++Q+FD+ L ++E + V +I ++ + I
Sbjct: 177 LVDTLHAYLVRQAEAGANLLQLFDSWTNYLSRSDYEEFVFPYVEELIERLKDST-DVPLI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F KG+ L + T ++A+ +DWSV LS +++ +QGNL+P L ++ +
Sbjct: 236 YFFKGSSSFL-DLAEQTKADALSVDWSVDLSLEA-VRRRKVLQGNLEPSVLYASDETIRF 293
Query: 304 GVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L + +IFNLGHG+ P ++ + V LV TV+ +I
Sbjct: 294 KALELLRGMPRKTGYIFNLGHGLAPDMEFEKVKLLVDTVKDYRI 337
>gi|331228847|ref|XP_003327090.1| uroporphyrinogen decarboxylase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306080|gb|EFP82671.1| uroporphyrinogen decarboxylase [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 387
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 123/376 (32%), Positives = 192/376 (51%), Gaps = 36/376 (9%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L +G P+W+MRQAGRYLPE+R++R+ F ++C TPE E+T+Q
Sbjct: 10 SPTNDLLLRAARGEKTERSPVWVMRQAGRYLPEFRKLRESHG-FFEICRTPELATEVTMQ 68
Query: 62 PIRRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE----IYLLNPNID 114
PI+RY D AI+FSDILVI AL V N GP +PI+++E + + +
Sbjct: 69 PIKRYEGLLDGAIIFSDILVIPQALEMEVIM--NPGPIFPNPISSKEQMEEMINKKISPE 126
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF--------IKDHGQN 166
L ++++I + +L N I L GF GAPWT+ +YM SGG
Sbjct: 127 ELKEKLNYVYEAIKLTTLELQNRIPLFGFVGAPWTLFAYMTSGGGGSGLNASKATSFDTA 186
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSV 226
+ + + LL+ L+ V A +L+ QI AG ++Q+FD+ AG L +++FE+++ +
Sbjct: 187 KNWIQVHPELSARLLEKLALVCALHLVNQIEAGCQIVQVFDSWAGELSDYDFEHFSLPYL 246
Query: 227 GRIISAVRRKYPN-----AKFISFAKGAG--YMLKNYRRLTDSNAIGLDWSVPLSFALE- 278
R+ + V+ + FAKGA + L+ + + + LDW V ++A+E
Sbjct: 247 RRVSTLVKEGLSQANIHPVPMVVFAKGANLPHQLQQLAS-SGYSTVSLDWKVRPAYAIEA 305
Query: 279 ---LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG------PFIFNLGHGITPQV 329
L +QGNLDP L +Q + V + +G P I NLGHGITP V
Sbjct: 306 LGSLSNSIALQGNLDPAVLHTDHQTIKKYVRLMFANQEAGGFLPHLPHITNLGHGITPGV 365
Query: 330 DPKNVLDLVKTVRSEK 345
DP+ + ++ V E
Sbjct: 366 DPEAMRTFLEAVHEES 381
>gi|298243812|ref|ZP_06967619.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
gi|297556866|gb|EFH90730.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
Length = 359
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 110/340 (32%), Positives = 174/340 (51%), Gaps = 6/340 (1%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ L+ + P+W MRQAGR L EYR +R+K+ + L M TPE + E+TL P++ +
Sbjct: 21 RFLDACYHRQPDATPVWFMRQAGRCLAEYRALRQKY-DMLTMVKTPELSTEVTLMPVKTF 79
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAI++SDIL +A+G + GP + + + N I + Q+
Sbjct: 80 GVDAAIIYSDILTPLEAMGVSFEIRHEVGPLIHHPIRNQQDVENIRIPNGPEIAPYMMQA 139
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I ++R+++ +IGF GAP+T+A Y+I G +D+ + Y ++ L++ L+
Sbjct: 140 IQMVRREVEGKQAVIGFAGAPFTLACYLIEGRPSRDYRNAKAMMYSQPELWHALMEKLTT 199
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
V+ YL Q+ AGVD +Q+FD+ G L +E Y V I +V++ I F
Sbjct: 200 VTQSYLGEQVQAGVDAVQLFDSWVGALSPSVYERYVQPYVHHIFDSVKQT--GIPAIHFG 257
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMIDGV 305
G +L++ + IGLD V L E E VQGNLDP+ L+ V+ +
Sbjct: 258 TGTSALLESMTAAGG-DIIGLDSHVELDEGWERVGFEHGVQGNLDPILLLTEWPVIESAM 316
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + P IFNLGHG+ P +P + LV+ V +E
Sbjct: 317 RDVLKRAANRPGHIFNLGHGVLPPTNPDLLRQLVEAVHAE 356
>gi|304320452|ref|YP_003854095.1| Uroporphyrinogen decarboxylase [Parvularcula bermudensis HTCC2503]
gi|303299354|gb|ADM08953.1| Uroporphyrinogen decarboxylase [Parvularcula bermudensis HTCC2503]
Length = 340
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 141/334 (42%), Positives = 197/334 (58%), Gaps = 2/334 (0%)
Query: 11 VLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
VL+G V PPIW MRQAGRYLPEYR +R FLD+CYTPE +TLQPI RY+ DA
Sbjct: 7 VLRGTVQEIPPIWFMRQAGRYLPEYRDLRANAGGFLDLCYTPEKAARVTLQPIDRYDLDA 66
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISIL 130
AILF+DIL++ ALG ++ F EGPR+ P + + + L PI++++S +
Sbjct: 67 AILFADILLVPQALGMDLWFEPGEGPRLAPALAEGDAAVLFEQRDIHDRLGPIYETVSRV 126
Query: 131 RKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE 190
R LP LIGF GAPWTVA+YM++GG +KD R Y + F ++D L+D + +
Sbjct: 127 RAALPQEKALIGFAGAPWTVATYMLAGGSVKDPAGLRAVVYDDRERFAAIIDVLTDATID 186
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
YL Q+ AG +VIQ+FD+ AG L E F+ + V RI +A+R + + I F +G+G
Sbjct: 187 YLKKQVDAGAEVIQLFDSWAGGLPEALFDQFCVAPVARIAAALRA-HADIPVIGFPRGSG 245
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
+ + L D A+ +D +P +A E L VQG LDP+ +V G M+ + +
Sbjct: 246 PLYRKIAALPDIAAVSIDTGMPADWAAEALSPLAVVQGGLDPLLIVKGGTEMLKAADQLR 305
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
PF+FN+GHG+ PQ P+NV LV VR
Sbjct: 306 ASFEGRPFVFNVGHGLVPQTPPENVAALVNHVRG 339
>gi|269796868|ref|YP_003316323.1| uroporphyrinogen decarboxylase [Sanguibacter keddieii DSM 10542]
gi|269099053|gb|ACZ23489.1| uroporphyrinogen decarboxylase [Sanguibacter keddieii DSM 10542]
Length = 355
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 110/344 (31%), Positives = 172/344 (50%), Gaps = 8/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ ++ L+G + P+W MRQAGR LPEY R+ LD C P E+TLQP
Sbjct: 14 TTRSPLVRALRGERPDSIPVWFMRQAGRSLPEYLAAREGVA-MLDSCLDPALASEITLQP 72
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+RR+ DA I FSDI+V +V GP + +P+ T L L
Sbjct: 73 VRRHQVDAGIFFSDIVVPLRLADVDVDIAPGVGPVLGEPVRTPADVDRLLEKTLTDEALQ 132
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI ++++ +L LIGF GAP+T+A+YM+ G +DH R + + ++ L
Sbjct: 133 PIRDAVALTVAEL-GSTPLIGFAGAPFTLAAYMVEGRPSRDHLGARRMMHTDPESWARLT 191
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ +DV+ +L AQ+ AG Q+FD+ AG L ++ + A S R ++ V+
Sbjct: 192 TWAADVTGTFLRAQVLAGTSAAQLFDSWAGSLSLADYVAHVAPSSARALTHVQDL--PVP 249
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G G++L R + ++ +G+D+ PL A L P+QGN+DP L V
Sbjct: 250 VIHFGTGTGHLLPAMRDV-GADVVGVDYRTPLDEANAMLGGTTPLQGNIDPALLGAPWPV 308
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +++ + P + NLGHG+ P DP + +V+ V S
Sbjct: 309 LEAHVRDVVERGRTAPAHVVNLGHGVPPDTDPTVLTRVVELVHS 352
>gi|302782237|ref|XP_002972892.1| hypothetical protein SELMODRAFT_231982 [Selaginella moellendorffii]
gi|300159493|gb|EFJ26113.1| hypothetical protein SELMODRAFT_231982 [Selaginella moellendorffii]
Length = 338
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 101/325 (31%), Positives = 170/325 (52%), Gaps = 5/325 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ K +F + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAAYRKLADKHPSFRKRSEETDLIVEISLQPWKAFMPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + +GP + DP+ + E +ID L+ L + S+ LR+++ N ++G
Sbjct: 61 IGVEFEIDDAKGPIISDPVVSVERASQLHSID--LSRLEFVGDSLRTLRREVGNGAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y+I G + + + + Y+N +LD L++ +YL+ QI +G
Sbjct: 119 FVGAPWTLATYLIEGRSTRTYKKIKGMCYENPELLESILDHLANAIGDYLVFQIQSGAQC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFD+ G L +++ ++ + ++I V+ K P + +A G G +L+ T +
Sbjct: 179 VQIFDSWGGQLTPVQWDRWSKPYICKMIRTVKDKCPGVPIVLYANGNGGLLERMSD-TGA 237
Query: 263 NAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ IGLDW+V L L VQGN+DP L + + V ++ G+ I NL
Sbjct: 238 HVIGLDWTVDMLDGRKRLGDSVAVQGNVDPCVLFGPEWSITEAVVDVVRKAGNKGHILNL 297
Query: 322 GHGITPQVDPKNVLDLVKTVRSEKI 346
GHG+ ++V +T RS +
Sbjct: 298 GHGVLVGTPEESVAHFFQTARSLSL 322
>gi|294053799|ref|YP_003547457.1| uroporphyrinogen decarboxylase [Coraliomargarita akajimensis DSM
45221]
gi|293613132|gb|ADE53287.1| uroporphyrinogen decarboxylase [Coraliomargarita akajimensis DSM
45221]
Length = 344
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 120/347 (34%), Positives = 190/347 (54%), Gaps = 7/347 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +Q+ L ++ PPIWLMRQAGRYLPEYR+++ + +F+ M TPE E+TL
Sbjct: 1 MMTSRQRFLAAAACQPVDRPPIWLMRQAGRYLPEYRELKAQ-HDFVTMVRTPELAAEVTL 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP++R+ DAAI+FSDILVI +ALG+ F + G MD + + + + L
Sbjct: 60 QPLKRFPLDAAIIFSDILVIPEALGQGYHFRDQGGIGMDYLLDTAEKIEALDAEKVTERL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ + + K+ L+GFCG+PWT+A YM+ GG KD + A+ F L
Sbjct: 120 AYVASALELTKFKMDGDKALLGFCGSPWTLACYMVEGGSAKDFIAIKRMAWDQPELFEKL 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ +YL QI AG D +QIFD+ +E ++ R + II+A++ +
Sbjct: 180 MQKLTHAIIDYLHMQIDAGADALQIFDSWGSICPAIHYEAWSLRWIHDIINALKGR---V 236
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQ 299
I +AKG G+ + R T ++ + LDW++ + ++ VQGNLDP+ L +
Sbjct: 237 PVILYAKGMGHKSPDLLR-TGASILSLDWTLNMRRMRKVLGPHVTVQGNLDPVTLTTTPE 295
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ ++D +G P FIFNLGHG+ P + V L++ V +K
Sbjct: 296 IVRKEAMRLIDDIGRQPGFIFNLGHGMLPSAKIECVEALMEVVTGQK 342
>gi|42572441|ref|NP_974316.1| HEME1; uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|8777476|dbj|BAA97056.1| uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|22531275|gb|AAM97141.1| putative uroporphyrinogen decarboxylase [Arabidopsis thaliana]
gi|31711818|gb|AAP68265.1| At3g14930 [Arabidopsis thaliana]
gi|332642070|gb|AEE75591.1| uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana]
Length = 341
Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats.
Identities = 100/322 (31%), Positives = 164/322 (50%), Gaps = 5/322 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ Y+++ KK +F + + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAVYQKLAKKHPSFRERSENTDLIVEISLQPWQAFRPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
G E +GP + PI T+E ID L + S+ ILR+++ H ++G
Sbjct: 61 FGVPFDIEEVKGPVIQSPIRTEEDMKRLHPID--FEKLQFVGDSLKILRREVGEHAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y++ GG + + + + LL L+ EY++ Q+ G
Sbjct: 119 FVGAPWTIATYIVEGGTTRTYTVIKNMCHTAPDVLRALLSHLTKAITEYVVYQVEHGAHC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
IQIFD+ G L +E ++ + II AV+++ P+ + + G G +L+ + T +
Sbjct: 179 IQIFDSWGGQLTPEMWERWSKPYIEEIIHAVKKRCPDTPIVFYINGNGGLLERM-KGTGA 237
Query: 263 NAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ IGLDW+V ++ L E VQGN+DP L + + + ++ G I NL
Sbjct: 238 DVIGLDWTVDMADGRRRLGSEVSVQGNVDPAYLFSPLPALTEEIERVVKCAGPKGHILNL 297
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHG+ + V +T R+
Sbjct: 298 GHGVLVGTPEEAVAHFFETARN 319
>gi|315453972|ref|YP_004074242.1| uroporphyrinogen decarboxylase [Helicobacter felis ATCC 49179]
gi|315133024|emb|CBY83652.1| uroporphyrinogen decarboxylase [Helicobacter felis ATCC 49179]
Length = 340
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 6/340 (1%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ PIW+MRQAGRYL EY+++R++ KNFLD+C + E+TLQPI +
Sbjct: 3 FIDACFRKATPYTPIWMMRQAGRYLREYQEVRQQAKNFLDLCANVKLATEVTLQPIEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDIL++ A+G + F+ GP+ T + ++ L +++ I
Sbjct: 63 VDAAILFSDILLLPHAMGLPLEFLPGVGPKFTRTITN-LEDIHALHTGAHQQLNYVYEII 121
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S +R +L LIGF GAPWT+A+YMI G K + + Y + LL+ LS
Sbjct: 122 SSVRAQLDKSKALIGFSGAPWTLATYMIEGQGSKTYRHCKKLLYSQPEILHALLEKLSSE 181
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL AQ+ AG D + IFD+ AG L + + + +I A++ KYP I F K
Sbjct: 182 LIAYLSAQVEAGADALMIFDSWAGALELEAYLTFGWNYIQKITRALKAKYPKIPLIIFPK 241
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G G L + D +G DW PL A E L +QGNL+P RL + M +GV+
Sbjct: 242 GVGAYLAHLS--GDFEVLGCDWGTPLKMAQEILGDRYVLQGNLEPARLY-SPEAMAEGVD 298
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL+V+G P FIFNLGHG+ + ++LV+ VR +
Sbjct: 299 RILEVMGKAPGFIFNLGHGMIEDLPRAQAIELVRLVRQKS 338
>gi|73977148|ref|XP_861922.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 6 [Canis familiaris]
Length = 321
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 114/344 (33%), Positives = 164/344 (47%), Gaps = 45/344 (13%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YMI GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+D YL+ Q+ AG
Sbjct: 194 ILTDALVPYLVGQVAAGAQ----------------------------------------- 212
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAK + L+ + +GLDW+V A E + K +QGNLDP L + +
Sbjct: 213 IIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEI 271
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 GRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKYS 315
>gi|302812715|ref|XP_002988044.1| hypothetical protein SELMODRAFT_235444 [Selaginella moellendorffii]
gi|300144150|gb|EFJ10836.1| hypothetical protein SELMODRAFT_235444 [Selaginella moellendorffii]
Length = 338
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 100/325 (30%), Positives = 170/325 (52%), Gaps = 5/325 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ K +F + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAAYRKLADKHPSFRKRSEETDLIVEISLQPWKAFMPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + +GP + DP+ + E +ID L+ L + S+ LR+++ + ++G
Sbjct: 61 IGVEFEIDDAKGPIISDPVVSVERASQLHSID--LSRLEFVGDSLRTLRREVGSGAAVLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y+I G + + + + Y+N +LD L++ +YL+ QI +G
Sbjct: 119 FVGAPWTLATYLIEGRSTRTYKKIKGMCYENPELLKSILDHLANAIGDYLVFQIQSGAQC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIFD+ G L +++ ++ + ++I V+ K P + +A G G +L+ T +
Sbjct: 179 VQIFDSWGGQLTPVQWDRWSKPYICKMIRTVKDKCPGVPIVLYANGNGGLLERMSD-TGA 237
Query: 263 NAIGLDWSVP-LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ IGLDW+V L L VQGN+DP L + + V ++ G+ I NL
Sbjct: 238 HVIGLDWTVDMLDGRKRLGDSVAVQGNVDPCVLFGPEWSITEAVVDVVRKAGNKGHILNL 297
Query: 322 GHGITPQVDPKNVLDLVKTVRSEKI 346
GHG+ ++V +T RS +
Sbjct: 298 GHGVLVGTPEESVAHFFQTARSLSL 322
>gi|114556200|ref|XP_001153755.1| PREDICTED: similar to Chain A, Phe232leu Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 1 [Pan
troglodytes]
Length = 329
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 114/352 (32%), Positives = 167/352 (47%), Gaps = 53/352 (15%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ-- 61
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQQP 73
Query: 62 ------PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID 114
P+RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + +
Sbjct: 74 VSCFLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPE 133
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ + L +FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ
Sbjct: 134 VVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRP 193
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+A + LL L+D YL+ Q+ AG
Sbjct: 194 QASHQLLRILTDALVPYLVGQVAAGAQ--------------------------------- 220
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
I FAK + L+ + +GLDW+V A E + K +QGNLDP
Sbjct: 221 --------IIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCA 271
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 272 LYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 323
>gi|257053384|ref|YP_003131217.1| uroporphyrinogen decarboxylase [Halorhabdus utahensis DSM 12940]
gi|256692147|gb|ACV12484.1| uroporphyrinogen decarboxylase [Halorhabdus utahensis DSM 12940]
Length = 335
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 112/345 (32%), Positives = 180/345 (52%), Gaps = 15/345 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E ++ +G PP+WLMRQAGR+LPEYR++R+++ +FL+ TPE E+TL
Sbjct: 1 MSE---LLVRAARGERTERPPVWLMRQAGRHLPEYRELREEY-DFLEAVTTPEIAAEITL 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PI-TTQEIYLLNPNIDLFLN 118
QP RY D ++FSDIL I + LG + GP ++ PI ++ I L+
Sbjct: 57 QPWDRYRPDGVVMFSDILTILEPLGFDYHIESGTGPVVESPIADPGDVPQAYAPIQESLD 116
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + + + L ++ +IGF G P+T+ASY ++G ++H R F ++ AF
Sbjct: 117 Y---VGELLDRLDTQVGEETGIIGFAGGPFTLASYAVAGRPTRNHYPLRQFKARHPEAFA 173
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL ++D E+L Q+ G DV+Q+FDT+AG L + + I++ +
Sbjct: 174 DLLSIVADAVREFLSYQVDHGADVVQLFDTYAGVLPPAAYREFIQPLHREILTDI----- 228
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
+ I F + G L T ++ + LDW+V + A E + PVQGNLDP L G
Sbjct: 229 DVPTILFVRNMGGRLDQLAA-TGADVVSLDWTVEMDTAREQLGDRPVQGNLDPSVLFAGP 287
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + +++ G I NLGHG+ ++V V+T +S
Sbjct: 288 ETVRERTREVIEAAGDQGHILNLGHGVHQDTPIESVEAFVETAKS 332
>gi|114800363|ref|YP_762239.1| uroporphyrinogen decarboxylase [Hyphomonas neptunium ATCC 15444]
gi|123027535|sp|Q0BWA4|DCUP_HYPNA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|114740537|gb|ABI78662.1| uroporphyrinogen decarboxylase [Hyphomonas neptunium ATCC 15444]
Length = 344
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 130/344 (37%), Positives = 193/344 (56%), Gaps = 2/344 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +K+L L G V PP+W+MRQAGR+LPEY + R + K+FLD CYTP E TL
Sbjct: 1 MATSVKKLLAGLSGEVFKVPPVWMMRQAGRHLPEYLETRARSKDFLDFCYTPSLASEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY D AILF+DIL+I DA+G V F + EGP ++ I + + L
Sbjct: 61 QPIRRYGMDGAILFADILLILDAMGLKVAFEKGEGPLVEQINGPSDLARV-SPQKAADRL 119
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+++++S ++ LP TLIGF G+PWTV+ Y I G D +A+ +
Sbjct: 120 SPVYETVSRVKAALPAQTTLIGFAGSPWTVSLYAIEGRGKTDKSTAWRWAHGRPDDLAAV 179
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D +++ +AEYL Q+ AG + + +FD+ A L ++ F ++++ +R +
Sbjct: 180 MDLVAEATAEYLARQVEAGAEALMLFDSWAEGLPDNIFREVVIAPTRKLVALLRERGITV 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
I F +GAG ML Y R T A+GLD + +F EL K PVQG+LDP+ L+ G
Sbjct: 240 PIIGFPRGAGVMLPEYVRETGVTAVGLDTAASPAFINAELAKGFPVQGHLDPLLLIEGGA 299
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V +LD P IFNLGHG+ P+ +V +++ +R+
Sbjct: 300 RLDARVRELLDAYRGRPHIFNLGHGVRPETPIAHVERVLELIRN 343
>gi|322785863|gb|EFZ12482.1| hypothetical protein SINV_10627 [Solenopsis invicta]
Length = 326
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 109/326 (33%), Positives = 168/326 (51%), Gaps = 8/326 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE++++R + +F +C TP ++TLQPI R+ DA+I+FSDILVI A+
Sbjct: 1 MRQAGRYLPEFQKVRAQ-HDFFSVCQTPALACQVTLQPIERFELDASIIFSDILVIPQAM 59
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
G V V GP + L L + +I++ R KL + LIGF
Sbjct: 60 GLKVEMVPGVGPVLPQPLADPSDLTRLVRPNVNEALKYVGDAITLTRHKLDGRVPLIGFT 119
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWT+ YMI GG + R + Y+ + LL ++D+ +YL+ Q+ AG ++Q
Sbjct: 120 GAPWTLMGYMIQGGGSSTMAKARSWLYKYPEDTHKLLQMITDIIVDYLVMQVKAGAQLLQ 179
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PNAKFISFAKGA-GYMLKNYRR 258
+F+++ L + F NY+ + + +I VR++ P I+F KGA LK +
Sbjct: 180 VFESNGDYLDDALFTNYSFKYLKQISDRVRKQLKEENIPEVPMIAFPKGATMNSLKILAK 239
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
IGLDW+V A +L +QGN+DP + ++D ++ G +
Sbjct: 240 DQSYEVIGLDWTVDPIEARNQLGPNITLQGNMDPCAMYSPQDKIVDRAQKMVSDFGKTRY 299
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
I NLGHGI P ++ +K + S
Sbjct: 300 IANLGHGILPDTPITSMEAFIKGIHS 325
>gi|145613461|ref|XP_363696.2| hypothetical protein MGG_01622 [Magnaporthe oryzae 70-15]
gi|145020529|gb|EDK04658.1| hypothetical protein MGG_01622 [Magnaporthe oryzae 70-15]
Length = 338
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 110/338 (32%), Positives = 184/338 (54%), Gaps = 21/338 (6%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIAD 82
MRQAGRYLPEY + + ++F + C PE LTLQPI R++ DA+I+FSDILVI
Sbjct: 1 MRQAGRYLPEYHEAK-GNRDFFECCRDPEVASTLTLQPIDRFDGLLDASIIFSDILVIPQ 59
Query: 83 ALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
A+G V V+ +GP +P+ + + +L ++D+ L ++++I++ RKKL
Sbjct: 60 AMGMVVEMVDKKGPHFPNPLQSPDDGQYAEVLARDVDVS-KELDYVYKAITLTRKKLQGR 118
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LIGFCGAPWT+ YM+ GG K Q++ + +++ +L ++++ EYL Q+
Sbjct: 119 VPLIGFCGAPWTLFCYMVEGGGTKLFIQSKKWIFRHPEESKKMLQKIAELCVEYLALQVQ 178
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYM 252
AG ++Q+FD+ AG L FE ++A + I + ++ I F KGA +
Sbjct: 179 AGAQLVQVFDSWAGELSPASFEQFSAPYLRYISENLPKRLKELSLDPVPMIVFPKGAWFA 238
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDPMRLVVGNQVMIDGVNAILD 310
L++ + N +GLDW + A +++ + +QGN DP L + V +++
Sbjct: 239 LEDCCAM-GYNVVGLDWLYSPAKANQVRGDREIVLQGNADPGVLYGTKDAITAAVKDMVE 297
Query: 311 VL----GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+I NLGHGITP V+P ++ ++ + +
Sbjct: 298 GFDWKEKKKGWIVNLGHGITPLVNPDDLKFYLQEIHRQ 335
>gi|84496257|ref|ZP_00995111.1| putative uroporphyrinogen decarboxylase [Janibacter sp. HTCC2649]
gi|84383025|gb|EAP98906.1| putative uroporphyrinogen decarboxylase [Janibacter sp. HTCC2649]
Length = 342
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 114/344 (33%), Positives = 174/344 (50%), Gaps = 8/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ + P+W MRQAGR LPEYR +R+ L+ C TP+ E+T+QP+
Sbjct: 3 SDSPLVLAATRQPVPHTPVWFMRQAGRSLPEYRALREGT-VMLEACRTPDLVTEITMQPV 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
RR+N DAAI FSDI+V A+G ++ V GP + P + L+ +L + + I
Sbjct: 62 RRHNVDAAIFFSDIVVPLAAVGVDLDIVPGTGPVV-PAPFRTRADLDRLPELTADAIPDI 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+S+ L +L LIGF GAP+T+ASY++ GG + H + + + + + +N L +
Sbjct: 121 TESVQRLVGEL-GSTPLIGFAGAPFTLASYLVEGGPSRTHEKTKALMHGDPQLWNDLCER 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ +S +L Q+ AG IQ+FD+ G L ++ Y + ++AV I
Sbjct: 180 LAQISGAFLRVQVEAGASAIQLFDSWVGALPRADYTAYVQKHSATALAAVADL--GVPRI 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G G +L ++ +G+D+ V L+ A L VQGNLDP L V+
Sbjct: 238 HFGVGTGELLDLMGE-AGADVVGVDYRVSLTDAVARLGDAYAVQGNLDPALLGAPWDVLE 296
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V AI+D P IFNLGHG+ P DP + +V V
Sbjct: 297 ARVRAIVDEGRHAPGHIFNLGHGVPPHADPDVLTRIVDVVHEHS 340
>gi|195629468|gb|ACG36375.1| hypothetical protein [Zea mays]
Length = 374
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 101/319 (31%), Positives = 170/319 (53%), Gaps = 6/319 (1%)
Query: 8 ILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
++ +G + PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R +
Sbjct: 46 LVRAARGEDGLPRPPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAF 105
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
D ILFSDIL A+G +++GP + P+ ++E IDL + L + +
Sbjct: 106 APDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSKEQVRELVPIDLDM--LQFVGE 163
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
S+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL L+
Sbjct: 164 SLKILRNEIDGKAALLGFVGAPWTIATYIVEGGMTNTYTNIKSMCHTAPDVLKGLLSHLA 223
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++Y+I Q+++G IQIFD+ G L H +E ++ + +I+S ++++ PN + +
Sbjct: 224 QAISDYIIYQVNSGAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPNVPLVLY 283
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L+ + T ++ IGLDW+V + L VQGN+DP L V+ D
Sbjct: 284 INGNGGLLERMKN-TGADVIGLDWTVDMTDGRRRLGNGISVQGNVDPAFLFSPLPVLTDE 342
Query: 305 VNAILDVLGSGPFIFNLGH 323
++ ++ G I NLG
Sbjct: 343 IHRVVKAAGPKGHILNLGC 361
>gi|157804282|ref|YP_001492831.1| uroporphyrinogen decarboxylase [Rickettsia canadensis str. McKiel]
gi|166234282|sp|A8F0B3|DCUP_RICCK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|157785545|gb|ABV74046.1| uroporphyrinogen decarboxylase [Rickettsia canadensis str. McKiel]
Length = 339
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 138/340 (40%), Positives = 203/340 (59%), Gaps = 3/340 (0%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++L L+GN + P+W MRQAGRYLPEY++IR+ KNFLD CY E+TLQPIRR
Sbjct: 2 KQLLNPLKGNS-DKIPVWFMRQAGRYLPEYKKIRETIKNFLDFCYDVNKATEVTLQPIRR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y+FDAAI+FSDILV+ ALG V F EN GP + +QE + N L +++
Sbjct: 61 YHFDAAIIFSDILVLPHALGWEVDFKENIGPILRQFRSQEDFKYL--QSDTNNKLEKVYK 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I ++K+LP+ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+FL
Sbjct: 119 IIKKVKKELPSTTSLIGFAGSPWTVMSYMLEGKGKQDFKTSKKFVYENKALSKELLNFLI 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D + +LI Q+ +G +++++FD+ +G L E EF + +II V+ P I+F
Sbjct: 179 DKTTYHLINQVESGANILKLFDSCSGVLAEEEFTEFVIEPTKKIILKVKEVLPKTPIIAF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
KGAG + + + + + + +D +PL E + VQGNLDP+ L+ +++ +
Sbjct: 239 PKGAGLLYEKFIKEVPIDILAVDQMIPLEKMKEWSDKVIVQGNLDPVVLLTNKEIIKEKA 298
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL V+ FIFNLGHGI P+ +NV L + VRS K
Sbjct: 299 YEILQVMEGKNFIFNLGHGILPETPIENVEFLTEYVRSFK 338
>gi|297567363|ref|YP_003686335.1| uroporphyrinogen decarboxylase [Meiothermus silvanus DSM 9946]
gi|296851812|gb|ADH64827.1| uroporphyrinogen decarboxylase [Meiothermus silvanus DSM 9946]
Length = 356
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 123/343 (35%), Positives = 184/343 (53%), Gaps = 13/343 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L G + PIW+MRQAGRYLPEY ++ + +F +M TPE E+TLQP+RR
Sbjct: 16 PLFLRAAWGEDTSRAPIWVMRQAGRYLPEYLAVKARA-SFWEMVRTPELAAEVTLQPLRR 74
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT-QEIYLLN-PNIDLFLNYLLP 122
+ DAAILFSDI+ A+G + F N GP + +PI + + I L P + +
Sbjct: 75 FPLDAAILFSDIMTPLQAMGVRIEF--NPGPLIAEPIRSLRHIEALRVPEPEEIAPFGE- 131
Query: 123 IFQSISILRKKLPN-HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++I ++R++L +I LIGF GAP T+A+Y+I G K++ R F Q A + LL
Sbjct: 132 --EAIRLVRRELEGKNIPLIGFGGAPLTLATYLIQGSGSKEYEAFRAFLRQEPAAAHTLL 189
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L++VS YL Q+ AG IQ+FD+ AG L E + +A R++ A+ A
Sbjct: 190 EKLTEVSIRYLQGQLRAGAQAIQLFDSWAGLLDEATYRAFALPYTTRVLEALAGW--GAP 247
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I A GA ++ L + +DW + L + +QGNLDP L+ +V+
Sbjct: 248 RIYLAVGASHLYPVIAELP-LEVVSVDWRLGLERIRPYFPQRTLQGNLDPAVLLAPPEVI 306
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +L GP IFNLGHGI Q P+++ L++TV +
Sbjct: 307 AQEAHRVLRAGLGGPHIFNLGHGILRQTPPEHLAHLIETVHAF 349
>gi|302511525|ref|XP_003017714.1| hypothetical protein ARB_04597 [Arthroderma benhamiae CBS 112371]
gi|291181285|gb|EFE37069.1| hypothetical protein ARB_04597 [Arthroderma benhamiae CBS 112371]
Length = 350
Score = 363 bits (931), Expect = 3e-98, Method: Composition-based stats.
Identities = 113/354 (31%), Positives = 173/354 (48%), Gaps = 32/354 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L + AGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAAR--------------AGRYLPEYHEAK-GDRDFFECCRSPEVASTLTLQPI 53
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL----LNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP P+ T E LN +D+
Sbjct: 54 ERYAGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRTVDVT 113
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 114 TE-LDYVYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDA 172
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S+V E+L Q+ AG +IQ+FD+ AG L F ++ + + + + ++
Sbjct: 173 SKKLLQKISEVCVEHLAQQVKAGAQMIQVFDSWAGELSPRSFAEFSLPYLRYVSANLPKR 232
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + N +GLDW + A + +QGN D
Sbjct: 233 LQELGLEAVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDAAKARAVANGRVVLQGNAD 291
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 292 PGCLYGTREGITAVVEEMVKSFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 345
>gi|227502555|ref|ZP_03932604.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49725]
gi|306835120|ref|ZP_07468160.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49726]
gi|227076717|gb|EEI14680.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49725]
gi|304568977|gb|EFM44502.1| uroporphyrinogen decarboxylase [Corynebacterium accolens ATCC
49726]
Length = 347
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 114/353 (32%), Positives = 179/353 (50%), Gaps = 19/353 (5%)
Query: 1 MNERKQ-KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M+ + I++ G + PP+WLMRQAGR LPEYR R+ + L+ C+ PE E+T
Sbjct: 4 MSRLNRAPIIDAALGRTPSRPPVWLMRQAGRSLPEYRAAREGI-SMLESCFMPELLAEIT 62
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLN 118
LQP+RR++ DAAILFSDI+V A G NV V GP M+ + + P ++
Sbjct: 63 LQPVRRHDVDAAILFSDIVVPLKAAGVNVDIVPGRGPVMEKAVREKGDIGKLPILEAD-- 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + Q I+ + +L LIGF GAP+T+ASY+I GG K+H + + + ++
Sbjct: 121 -VPEVAQGIAGILGELTETQALIGFVGAPFTLASYLIEGGPSKNHERTKALMHAEPETWH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L +L Q+ AG+D +Q+FD+ AG L E ++ + I+++V
Sbjct: 180 MLMRRLVPTIINFLRVQVDAGIDAMQLFDSWAGYLNERDYREFVLPYSQEILASV----- 234
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
+ I F G G +L+ S +G+D+ V + A + +QGNLDP L G+
Sbjct: 235 DIPRIHFGVGTGELLQAMSE-AGSEVMGVDYRVAMDAAAQRVNSRVLQGNLDPALLFAGD 293
Query: 299 QVMIDGVNAI---LDVLGSGP----FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V I ++ I+NLGHG+ P D + + V + E
Sbjct: 294 DAVRQAVRTIRGEVERAQQCGDIDTHIWNLGHGVLPTTDAEAITRAVSIIHEE 346
>gi|302666723|ref|XP_003024958.1| hypothetical protein TRV_00879 [Trichophyton verrucosum HKI 0517]
gi|291189036|gb|EFE44347.1| hypothetical protein TRV_00879 [Trichophyton verrucosum HKI 0517]
Length = 350
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 113/354 (31%), Positives = 173/354 (48%), Gaps = 32/354 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L + AGRYLPEY + + ++F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAAR--------------AGRYLPEYHEAK-GDRDFFECCRSPEVASTLTLQPI 53
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYL----LNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP P+ T E LN +D+
Sbjct: 54 ERYAGLIDAAIIFSDILVIPQAMGMEVEMIDKKGPSFPSPLRTPEDEQYTQVLNRTVDVT 113
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R+KL + LIGF GAPWT+ YM+ GG K + + Y+ A
Sbjct: 114 TE-LDYVYKAITLTRQKLEGRVPLIGFVGAPWTLLCYMVEGGGSKMFAAIKTWIYKYPDA 172
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL +S+V E+L Q+ AG +IQ+FD+ AG L F ++ + + + + ++
Sbjct: 173 SKKLLQKISEVCVEHLAQQVKAGAQMIQVFDSWAGELSPRSFAEFSLPYLRYVSANLPKR 232
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + N +GLDW + A + +QGN D
Sbjct: 233 LQEMGLEVVPMTVFAKGAWYALDELCE-SGYNVVGLDWQHDAAKARAVANGRVVLQGNAD 291
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V ++ G G +I NLGHG+TP V P ++ + +
Sbjct: 292 PGCLYGTREGITAVVEEMVKGFGGGKQGWIANLGHGVTPFVKPDDLKFYFEEIH 345
>gi|15605850|ref|NP_213227.1| uroporphyrinogen decarboxylase [Aquifex aeolicus VF5]
gi|6014936|sp|O66667|DCUP_AQUAE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|170292161|pdb|2EJA|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Aquifex Aeolicus
gi|170292162|pdb|2EJA|B Chain B, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Aquifex Aeolicus
gi|2983013|gb|AAC06624.1| uroporphyrinogen decarboxylase [Aquifex aeolicus VF5]
Length = 338
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 191/344 (55%), Gaps = 10/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L L+G I P+WLMRQAGRY+PEYR+IR + KNFL++C + E++L P+
Sbjct: 3 KNDLLLRSLRGEPIGRFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPL 62
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
+ DA I+FSDILV + LG V FVE EGP++ + ++ L + +
Sbjct: 63 KILGVDAIIIFSDILVPLEPLGVKVEFVEGEGPKLS--WSGKVSDLKK---YDPSQNAYV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ I +++ + + +IGF GAP+T+ SY+I GG KD ++F ++N + + L+D
Sbjct: 118 YEIIKRVKEA-QDEVPVIGFAGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDI 176
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L++ YL QI AG DV+QIFD+ L ++ Y V +IS ++ + + I
Sbjct: 177 LTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKD-FSDTPVI 235
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F +G+ + + ++A+ +DWSV + ++ +G QGNL+P L +V+ +
Sbjct: 236 YFFRGSSSFI-DLAVDYRADALSVDWSVDIPELFKIYDKG-FQGNLEPAVLYASEEVIEE 293
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L + ++FNLGHG+ P ++ + V LV V+S +
Sbjct: 294 KTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKSFPL 337
>gi|73666643|ref|YP_302659.1| uroporphyrinogen decarboxylase HemE [Ehrlichia canis str. Jake]
gi|72393784|gb|AAZ68061.1| Uroporphyrinogen decarboxylase HemE [Ehrlichia canis str. Jake]
Length = 334
Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats.
Identities = 131/330 (39%), Positives = 198/330 (60%), Gaps = 5/330 (1%)
Query: 16 VINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFS 75
P+W MRQAGRYLPEY ++ +K +FL++CYTPE E+TLQP++R+ DAAI+FS
Sbjct: 10 KQQEVPVWFMRQAGRYLPEYHEVARKAGSFLELCYTPELVKEVTLQPVKRFGLDAAIIFS 69
Query: 76 DILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DILVI DALG NV F + GP + I++ + ++ +++L +F+ I +RK L
Sbjct: 70 DILVIPDALGCNVEFTKENGPSLQLISSHK--EIDVPEKAVIDHLKKVFEGIKEVRKSLQ 127
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
LIGF GAPWT+ASYMI G K+ + R +Y + ++ ++ V+ YLI Q
Sbjct: 128 KSKPLIGFAGAPWTIASYMI--GRDKNFSKIREMSYLQDKELGKIIKKITKVTISYLIKQ 185
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I +GVD+IQIFD++AG + +EF + I+S++R+ YP I F KGAG M K
Sbjct: 186 IESGVDIIQIFDSNAGIVSANEFRKWIINPTREIVSSIRKLYPEFPIIGFPKGAGIMYKQ 245
Query: 256 YRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
+ T+ + +D++VP+S+A + +QGN+DP + I +++++
Sbjct: 246 FSEETEVSVTSIDYNVPISWAKDNISSI-LQGNIDPYLVAYDKSKAISQTKDLINIMKDE 304
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
PFIFNLGHGI P N+ L++TV+S
Sbjct: 305 PFIFNLGHGIIPSTPIANIEALIETVKSNS 334
>gi|304403826|ref|ZP_07385488.1| uroporphyrinogen decarboxylase [Paenibacillus curdlanolyticus YK9]
gi|304346804|gb|EFM12636.1| uroporphyrinogen decarboxylase [Paenibacillus curdlanolyticus YK9]
Length = 379
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 110/344 (31%), Positives = 177/344 (51%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + ++ ++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+T+ P+R
Sbjct: 26 NDRFIRAIRQEAVDQVPVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTMMPVR 84
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ ++G + V N GP + +PI + ID+ L +
Sbjct: 85 KLGVDAAILYSDIMNPVASIGIDFDIVANVGPVIANPIRSAADVDRLKPIDVE-GDLGHV 143
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL ++L + LI F GAP+T+ASY+I G +++ + + Y ++ L+
Sbjct: 144 IETIRILDREL--DVPLITFAGAPFTIASYIIEGRPSRNYLRTKALMYSEPDVWHRLMHK 201
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + AG Q+FD+ G L H+F + ++ RI S + P K
Sbjct: 202 LGDMVIAYLRAHMAAGGKAFQLFDSWVGALAPHDFRTFVLPTIERIFSEL-SDLPQPKIY 260
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+G +L L ++AIGLDW V + L + VQGNLDP+ L V+
Sbjct: 261 FPGVASGELLTELHSL-QADAIGLDWRVSIPEGRRRLGGKFAVQGNLDPVVLTAPQSVIE 319
Query: 303 DGVNAILD-VLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D L F+FNLGHG+ P+ + + L
Sbjct: 320 AHAKTIIDQGLEQPGFVFNLGHGLFPEASLEKLKALTDYAHDYS 363
>gi|297622471|ref|YP_003703905.1| uroporphyrinogen decarboxylase [Truepera radiovictrix DSM 17093]
gi|297163651|gb|ADI13362.1| uroporphyrinogen decarboxylase [Truepera radiovictrix DSM 17093]
Length = 346
Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats.
Identities = 119/340 (35%), Positives = 175/340 (51%), Gaps = 10/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
LE +G PIW+MRQAGRYL EYR +R ++ +F +MC TPE E+TLQP+RR
Sbjct: 2 SLFLEAARGQDTARAPIWIMRQAGRYLSEYRALRARY-SFWEMCRTPELAAEVTLQPLRR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAAILF DI+ +G + F + GP + +P+ + + + +
Sbjct: 61 FDLDAAILFQDIMTPLPPMGVEIDF--SPGPVLKEPVRSAQQVRALRVPEGG-EIAPFVA 117
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I ++R + P + LIGF GAP T+A+Y++ G KD+ + R F + LLD L
Sbjct: 118 EAIRLIRAESP--VPLIGFGGAPLTLATYLVQGSGSKDYDEFRQFLRYAPETAHALLDKL 175
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D+S YL Q+ AG +Q+FD+ AG + +A RI A+ +
Sbjct: 176 TDLSVRYLKVQLQAGAQAVQLFDSWAGLHDARVYREFAKPYNTRIFEALAAF--GVPRLY 233
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
A GA ++ + L + +DW VPLS L +QGNLDP L+ V+
Sbjct: 234 IAVGALHLYGEIKDLP-CEVVSVDWRVPLSHVRPLLPGKTLQGNLDPAVLLAPEGVLRAE 292
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L GP IFNLGHGI Q DP+ + LV VR
Sbjct: 293 AERVLREGLGGPHIFNLGHGIMRQTDPERLAQLVAVVREF 332
>gi|88657828|ref|YP_506863.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis str.
Arkansas]
gi|88599285|gb|ABD44754.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis str.
Arkansas]
Length = 334
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 130/323 (40%), Positives = 196/323 (60%), Gaps = 5/323 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEYR++ ++ +FL++CYTPE E+TLQP+RR+ DAAI+FSDILVI
Sbjct: 15 PVWFMRQAGRYLPEYRKVAEEAGSFLELCYTPELVKEVTLQPVRRFGLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F + +GP + I+ ++ + L++L +F+ I +RK L L
Sbjct: 75 PDALGCKVEFTKEKGPELQLISNH--SEISVPEEAALDHLKNVFRGIKEVRKSLQRDKPL 132
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAPWT+ASYMI G K+ + R Y ++ +++ ++ V+ YLI QI +GV
Sbjct: 133 IGFAGAPWTIASYMI--GRDKNFSKIREMCYSQTKNLEKIVEKITKVTTLYLIKQIESGV 190
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
D+IQIFD++AG + EF+ + I+S++R+ YP I F KGAG M K + T
Sbjct: 191 DIIQIFDSNAGIVPAGEFKKWIIDPTKEIVSSIRKLYPEFPIIGFPKGAGVMYKQFSEET 250
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ + +D++ P+S+A +QGN+DP + I +++++ PFIFN
Sbjct: 251 EVSVTSVDYNTPMSWAKSNIPSV-LQGNIDPYLVAYDKSKAISQTKELINIMKDKPFIFN 309
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P N+ LV T++S
Sbjct: 310 LGHGVIPSTPIANIAALVDTIKS 332
>gi|148271766|ref|YP_001221327.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829696|emb|CAN00612.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 375
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 178/345 (51%), Gaps = 12/345 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++E +G P+W MRQAGR LPEYR++R + LD C PE E+TLQP+RR
Sbjct: 36 SLLVEAYRGRRGERAPVWFMRQAGRSLPEYRELRVGTR-MLDACLDPEMASEITLQPVRR 94
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIF 124
++ DA I FSDI++ G V V GP ++ P+ T P++D L PI
Sbjct: 95 HHVDAGIFFSDIVIPLKLAGVGVDIVAGRGPVLEKPVRTAADVAALPSLD--PAALEPIR 152
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+++ +L LIGF GAP+T+A+Y++ GG KDH R + + A++ L+ +
Sbjct: 153 QAVARTVAEL-GDTPLIGFAGAPFTLAAYLVEGGPSKDHIAARGLMHADPDAWDALMRWC 211
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR----RKYPNA 240
++++ +L AQ+ AG Q+FD+ AG L ++ A + + VR
Sbjct: 212 AEITGVFLHAQVMAGASAAQLFDSWAGGLSLADYTQRVAPASALALDHVRTITAADGRTV 271
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
+ F G G +L + +A+G+DW +PL A L PVQGN+DP L
Sbjct: 272 PLVHFGVGTGELLGAMHDV-GVDAVGVDWRIPLDEASRRLGGSVPVQGNVDPALLAAPWP 330
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ V +L+ + P I NLGHG+ P+ DP + +V VR
Sbjct: 331 ILEAHVRDVLERGKAAPAHILNLGHGVPPETDPTVLTRIVDLVRE 375
>gi|302833982|ref|XP_002948554.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
gi|300266241|gb|EFJ50429.1| uroporphyrinogen decarboxylase chloroplast precursor [Volvox
carteri f. nagariensis]
Length = 411
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 171/344 (49%), Gaps = 7/344 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L V +G P+WLMRQAGRY+ +R+ K+ F TP+ +EL+LQP+
Sbjct: 42 QDPLLLRVARGEDAERTPVWLMRQAGRYMAAFREFSDKYP-FRMRSETPDIAIELSLQPL 100
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R + D I FSDIL +G V+ +GP + +P+ + E + + L
Sbjct: 101 RAFRPDGIIFFSDILTPLPGMGIEFDMVKGKGPVIANPVRSAEHLRQLVPLSDPASRLPF 160
Query: 123 IFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVF--AYQNSRAFNW 179
I + +S LR++ + +TL+GF G PWT+A+Y + G KD + +V+ + N +
Sbjct: 161 IQKILSTLRQEADSEGVTLLGFIGTPWTLAAYAMEGKADKDCKETKVWKIMFHNPALLHS 220
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LDFL++ Y QI +G VIQ+FD+ A L +F ++ RI A++ KYP+
Sbjct: 221 FLDFLTEQLIVYAGYQIESGAQVIQLFDSWAHHLSPAQFAEFSMPYAERITRALKAKYPH 280
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I A G L+ + T ++ +GLDW+V + A L VQGN+DPM L
Sbjct: 281 VPVIFHANGGTGKLELMKE-TAADVVGLDWAVDMKDARATLGHGVKVQGNVDPMSLFGPE 339
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V L G I N+GHG+ +V + R
Sbjct: 340 EHIRVEVERCLRAAGPRGHILNVGHGVVQGTPESSVALFCELAR 383
>gi|227549761|ref|ZP_03979810.1| uroporphyrinogen decarboxylase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078147|gb|EEI16110.1| uroporphyrinogen decarboxylase [Corynebacterium lipophiloflavum DSM
44291]
Length = 349
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 119/357 (33%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M R+ I++ G P+W MRQAGR LPEYRQ+R LD C+ PE E
Sbjct: 1 MTRRELTHAPIIDAAYGRTPTRTPVWFMRQAGRSLPEYRQVRDGIG-MLDACFMPELLAE 59
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF 116
+TLQP+RR++ DAAILFSDI+V A G NV V GP M + ++ P ++
Sbjct: 60 ITLQPVRRHDVDAAILFSDIVVPLKAAGVNVEIVPGRGPVMAQAVRSRGDVDKLPMLE-- 117
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ + + I I+ +L + LIGF GAP+T+ASY++ GG K+H + + +
Sbjct: 118 -GDVEEVARGIRIILDELTDAQALIGFVGAPFTLASYLVEGGPSKNHEKTKAMMHGEPET 176
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
++ L++ L +L Q+ AG+D +Q+FD+ AG L E ++ + I+ +V +
Sbjct: 177 WHALMEKLVPTIVAFLRTQVTAGIDAMQLFDSWAGFLTERDYREHVLPYSVEILRSVEGE 236
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLV 295
I F G +L S +G+DW VPL A +QGNLDP L
Sbjct: 237 ---IPRIHFGVATGELLGAMSE-AGSEVMGVDWRVPLDVAARRFATPRVLQGNLDPAILF 292
Query: 296 VGNQVMIDGVNAILDVLGSG-------PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G V+ V I + IFNLGHG+ P D V + V + E+
Sbjct: 293 AGPGVVRGEVRRIKEEAARAIAAGDATGHIFNLGHGVLPTTDADAVTEAVAMIHEER 349
>gi|305679973|ref|ZP_07402783.1| uroporphyrinogen decarboxylase [Corynebacterium matruchotii ATCC
14266]
gi|305660593|gb|EFM50090.1| uroporphyrinogen decarboxylase [Corynebacterium matruchotii ATCC
14266]
Length = 380
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 116/355 (32%), Positives = 171/355 (48%), Gaps = 20/355 (5%)
Query: 2 NERKQKILEVLQ-GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+++ + G +W MRQAGR LPEYRQ+R + LD C+ PE E+TL
Sbjct: 27 TLTNAPLIDAITPGVREQRRAVWFMRQAGRSLPEYRQVRAGI-DMLDSCFMPELLAEITL 85
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+RR++ DAAILFSDI+V A G +V V GP + PI + P +D ++
Sbjct: 86 QPVRRHDVDAAILFSDIVVPLKAAGVDVEIVSGRGPVVAQPILSMSDVDKLPVLDSDID- 144
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + I+ L + LIGF GAP+T+ASY++ GG ++H + + + ++
Sbjct: 145 --GVMAGVGIIIDNLTSSQALIGFAGAPFTLASYLVEGGPSRNHEKTKAMMHAQPETWHA 202
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+ L+ +L QI AG+D +Q+FD+ AG L E ++ Y I +A+
Sbjct: 203 LMRKLTPTITHFLSMQISAGIDAMQLFDSWAGFLTERDYREYVLPYSMEIFAAIAGA--G 260
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL----QKEGPVQGNLDPMRLV 295
I F G G +L + ++ G+DW VPL A VQGNLDP L
Sbjct: 261 IPRIHFGVGTGELLGAMSQ-AGADVTGVDWRVPLDVAARRIHHAVGPKSVQGNLDPALLC 319
Query: 296 VGNQVMIDGVNAILDVLGSG-------PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +V+ I IFNLGHG+ P DP+ + V V
Sbjct: 320 AGEEVVRAEAARICAEADRAISAGHAIGHIFNLGHGVLPTTDPEMITRAVSLVHE 374
>gi|114848863|gb|ABI83634.1| uroporphyrinogen decarboxylase [Ehrlichia chaffeensis]
Length = 334
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 130/323 (40%), Positives = 196/323 (60%), Gaps = 5/323 (1%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W MRQAGRYLPEYR++ ++ +FL++CYTPE E+TLQP+RR+ DAAI+FSDILVI
Sbjct: 15 PVWFMRQAGRYLPEYRKVVEEAGSFLELCYTPELVKEVTLQPVRRFGLDAAIIFSDILVI 74
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
DALG V F + +GP + I+ ++ + L++L +F+ I +RK L L
Sbjct: 75 PDALGCKVEFTKEKGPELQLISNH--SEISVPEEAALDHLKNVFRGIKEVRKSLQRDKPL 132
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGF GAPWT+ASYMI G K+ + R Y ++ +++ ++ V+ YLI QI +GV
Sbjct: 133 IGFAGAPWTIASYMI--GRDKNFSKIREMCYSQTKNLEKIVEKITKVTTLYLIKQIESGV 190
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
D+IQIFD++AG + EF+ + I+S++R+ YP I F KGAG M K + T
Sbjct: 191 DIIQIFDSNAGIVPAGEFKKWIIDPTKEIVSSIRKLYPEFPIIGFPKGAGVMYKQFSEET 250
Query: 261 DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ + +D++ P+S+A +QGN+DP + I +++++ PFIFN
Sbjct: 251 EVSVTSVDYNTPMSWAKSNIPSV-LQGNIDPYLVAYDKSKAISQTKELINIMKDKPFIFN 309
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
LGHG+ P N+ LV T++S
Sbjct: 310 LGHGVIPSTPIANIEALVDTIKS 332
>gi|315648525|ref|ZP_07901624.1| uroporphyrinogen decarboxylase [Paenibacillus vortex V453]
gi|315276219|gb|EFU39565.1| uroporphyrinogen decarboxylase [Paenibacillus vortex V453]
Length = 352
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 109/345 (31%), Positives = 180/345 (52%), Gaps = 11/345 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + + ++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R
Sbjct: 4 NDQFIRACRKQAVSHVPVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ ++G + V+N GP + +PI + ID+ L +
Sbjct: 63 KLGVDAAILYSDIMNPVASIGVDFDIVKNIGPVIDNPIRSAADVEKLRPIDVE-GDLGHV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL K+L + LI F GAP+T+ASY+I G K++ + + Y + + L+D
Sbjct: 122 LETIRILDKEL--EVPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + G Q+FD+ G L +F+ + ++ RI + ++ + I
Sbjct: 180 LGDMVIAYLRAHVANGGKAFQLFDSWVGALSPQDFQTFVLPTIKRIFAELQDLH--VPKI 237
Query: 244 SFA-KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
F +G +L L+ + IGLDW V ++ L+ + VQGNLDP L V+
Sbjct: 238 YFPGVSSGELLPTLTDLS-VDVIGLDWRVSIAEGRRRLEHKYAVQGNLDPTVLTGPMPVI 296
Query: 302 IDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D F+FNLGHG+ P+ + + +L +
Sbjct: 297 QQYAKEIIDQGIQEPGFVFNLGHGLFPEASLEKLRELTSYIHEYS 341
>gi|119868294|ref|YP_938246.1| uroporphyrinogen decarboxylase [Mycobacterium sp. KMS]
gi|126434787|ref|YP_001070478.1| uroporphyrinogen decarboxylase [Mycobacterium sp. JLS]
gi|166234257|sp|A3PYL0|DCUP_MYCSJ RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|166234258|sp|A1UF48|DCUP_MYCSK RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119694383|gb|ABL91456.1| uroporphyrinogen decarboxylase [Mycobacterium sp. KMS]
gi|126234587|gb|ABN97987.1| uroporphyrinogen decarboxylase [Mycobacterium sp. JLS]
Length = 354
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 119/360 (33%), Positives = 179/360 (49%), Gaps = 24/360 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L +G P+W MRQAGR LPEYR +R + + C+ +
Sbjct: 1 MNTRRELPDSPYLAAARGRKPARVPVWFMRQAGRSLPEYRALRAR-NTMMQACFDADLIT 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V A G + V + GP +D P+ T ++
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLRASGIALDIVPDVGPVIDHPVRTAADVAAIRPLER 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ Q++ +L L + LIGF GAP+T+ASY++ GG K H +
Sbjct: 120 --QTVEPVEQAVRMLTAAL-GDVPLIGFAGAPFTLASYLVEGGPSKHHEHTKAMMLGAPD 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+DV+ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 177 TWHALMSALTDVTIAFLQAQVDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFQALAP 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRL---TDS-NAIGLDWSVPLSFALELQKEG-PVQGNLD 290
F G +L + + +G+DW L+ A + G +QGNLD
Sbjct: 237 A--GVPMTHFGVGTAELLGAMSEAIATSGAPGVVGVDWRTSLTDAAGRVERGSALQGNLD 294
Query: 291 PMRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+ L+ G V+ V +D G+ +FNLGHG+ P DP+ V V+ V S
Sbjct: 295 PVVLLAGWPVVERAVRAVVEDGRRAVDA-GAAGHVFNLGHGVLPATDPEIVTATVELVHS 353
>gi|170739349|ref|YP_001768004.1| uroporphyrinogen decarboxylase [Methylobacterium sp. 4-46]
gi|168193623|gb|ACA15570.1| uroporphyrinogen decarboxylase [Methylobacterium sp. 4-46]
Length = 357
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 149/348 (42%), Positives = 206/348 (59%), Gaps = 11/348 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VL G ++PPP W+MRQAGRYLPEYR++R K +FLD+CYTP++ E+TLQPIRR
Sbjct: 9 RPVLRVLSGESLSPPPAWMMRQAGRYLPEYRELRAKAGSFLDLCYTPDFATEVTLQPIRR 68
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIY--LLNPNIDLFLNYLLPI 123
+ F+AAILFSDILV+ ALG+ VRFVE EGPR+D + + L +++L P+
Sbjct: 69 FGFEAAILFSDILVVPHALGQGVRFVEGEGPRLDALEDPAAFGTLRGAGDARVMDHLAPV 128
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
F+++S LR LP TL+GFCGAPWTVASYMI G D R A ++ + L++
Sbjct: 129 FETVSRLRAALPRETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAARDPALLDGLIER 188
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG-------EHEFENYAARSVGRIISAVRRK 236
L VS EYL QI AG D +QIF++H G L ++ + RI++ +R +
Sbjct: 189 LVAVSTEYLARQIEAGADAVQIFESHGGTLPGMPEGEAGDALTRWSLGPIARIVAGLRAR 248
Query: 237 YPNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRL 294
P A+ I F +G G T ++A+G+DW V L+ V QGNL P L
Sbjct: 249 VPGARVIVFPRGTGLDGHARTLAATGADAVGVDWDVDLAALRGRLPGRAVTQGNLHPHTL 308
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G + V+AIL P IFNLGHGITP+ +V ++ +R
Sbjct: 309 IAGGAALDAAVDAILAATAGLPHIFNLGHGITPETPIAHVERMLARLR 356
>gi|229143778|ref|ZP_04272198.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST24]
gi|228639653|gb|EEK96063.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST24]
Length = 323
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 178/323 (55%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR+ + I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--DVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V +ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKSILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|170783148|ref|YP_001711482.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157718|emb|CAQ02920.1| uroporphyrinogen decarboxylase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 369
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 115/348 (33%), Positives = 179/348 (51%), Gaps = 12/348 (3%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++E +G+ P+W MRQAGR LPEYR++R + LD C PE E+TLQP
Sbjct: 27 TSSSLLVEAYRGHRGERAPVWFMRQAGRSLPEYRELRVGTR-MLDACLDPEMASEITLQP 85
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR++ DA I FSDI++ G V V GP ++ P+ T P++D L
Sbjct: 86 VRRHHVDAGIFFSDIVIPLKLAGVGVDIVAGRGPVLEKPVRTAADVAALPSLD--PAALE 143
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI Q+++ +L LIGF GAP+T+A+Y++ GG KDH R + + A++ L+
Sbjct: 144 PIRQAVARTAAEL-GDTPLIGFAGAPFTLAAYLVEGGPSKDHIAARGLMHADPDAWDALM 202
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR----RKY 237
+ ++++ +L AQ+ AG Q+FD+ AG L ++ A + + VR
Sbjct: 203 RWCAEITGVFLHAQVMAGASAAQLFDSWAGGLSLADYTQRVAPASALALDHVRTITAADG 262
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVV 296
+ F G G +L + +A+G+DW +PL A L PVQGN+DP L
Sbjct: 263 RTVPLVHFGVGTGELLGAMHDV-GVDAVGVDWRIPLDEASRRLGGSVPVQGNIDPALLAA 321
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ V +L+ + P + NLGHG+ P+ DP + +V VR
Sbjct: 322 PWPILEAHVRDVLERGKTAPAHVLNLGHGVPPETDPTVLTRIVDLVRE 369
>gi|184200495|ref|YP_001854702.1| uroporphyrinogen decarboxylase [Kocuria rhizophila DC2201]
gi|183580725|dbj|BAG29196.1| uroporphyrinogen decarboxylase [Kocuria rhizophila DC2201]
Length = 407
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 116/345 (33%), Positives = 179/345 (51%), Gaps = 10/345 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ ++ L+G P+W MRQAGR LPEYR R+ L+ C TP E+TLQP
Sbjct: 68 TSQSPLIRTLRGLPAAHRPVWFMRQAGRSLPEYRAAREGTG-MLEACLTPALAAEITLQP 126
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR+ DAAI FSDI+V G V V GP ++ P+ T P +L + L
Sbjct: 127 VRRHGVDAAIFFSDIVVPMKLAGVGVDIVAGRGPVLEHPVRTAADVAALP--ELPDSALD 184
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+ ++++ +L LIGF GAP+T+A+Y + GG +DH + R + + A++ L
Sbjct: 185 PVREAVARTVAEL-GETPLIGFAGAPFTIAAYAVEGGPSRDHLRPRTMMHADPAAWDALA 243
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + S +L AQ+ AG +Q+FD+ AG L ++E + R + + AV
Sbjct: 244 QWAARTSGAFLRAQVEAGASAVQLFDSWAGSLSLGDYEAHVQRHSAQALGAVADL--GVP 301
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G G +L R ++A+G+D+ +PL A L VQGN+DP L +V
Sbjct: 302 RIHFGTGTGELLVAMRE-AGADAVGVDYRIPLDEASRRLGGRTVVQGNIDPALLPAPREV 360
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V +L + P + NLGHG+ P DP+ + +LV + E
Sbjct: 361 LHEHVRDVLRRGSAAPGHVVNLGHGVPPDTDPRVLSELVTFIHKE 405
>gi|322368533|ref|ZP_08043101.1| uroporphyrinogen decarboxylase [Haladaptatus paucihalophilus DX253]
gi|320551817|gb|EFW93463.1| uroporphyrinogen decarboxylase [Haladaptatus paucihalophilus DX253]
Length = 334
Score = 359 bits (923), Expect = 2e-97, Method: Composition-based stats.
Identities = 102/338 (30%), Positives = 165/338 (48%), Gaps = 9/338 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ +G PP+WLMRQAGRY+PEYR IR+++ F + PE +TL P
Sbjct: 3 DLLVRAARGERTERPPVWLMRQAGRYIPEYRDIREQY-TFKEAIKNPEVAERITLLPWEL 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ D ++FSDIL + + LG + R GP + T + D+ + +
Sbjct: 62 FEPDGLVMFSDILTVLEPLGFDYRIESGVGPVVSNPVTDPGDVPTEFADVATE-IDYVGD 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ L+ + + ++IGF G P+T+ASY++ R F + AF LL +
Sbjct: 121 LLARLQSSIGDETSIIGFSGGPYTLASYVVGDEPTS-RKPIRRFRTNHPEAFRDLLSMFT 179
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
DV EY+ Q+ G DV+Q+FDT AG L ++ + RI A+ + I F
Sbjct: 180 DVVEEYVRYQVEQGADVVQVFDTWAGVLTPDDYREFVLPLHQRIFDAI-----DVPSIVF 234
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
A+ G L + + ++ +GLDW+V ++ A E + PVQGNLDP L+ + + +
Sbjct: 235 ARHPGGKL-DLLAESGADVVGLDWTVDMADAREQLGDTPVQGNLDPSYLLGSPEFVKEKT 293
Query: 306 NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +++ G I NLGHGI +N V +
Sbjct: 294 HEVIEKAGDSGHILNLGHGIDRTTPVENATAFVDAAKE 331
>gi|322381023|ref|ZP_08055059.1| uroporphyrinogen decarboxylase [Helicobacter suis HS5]
gi|321146545|gb|EFX41409.1| uroporphyrinogen decarboxylase [Helicobacter suis HS5]
Length = 339
Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 178/339 (52%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G PIW+MRQAGRYL EY++IRK+ KNFLD+C + +TLQP+ +
Sbjct: 3 FIDACLGKQTPYTPIWMMRQAGRYLSEYQEIRKQAKNFLDLCANVDLASTITLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDIL++ +G + FV GP+ + E + L ++ ++
Sbjct: 63 VDAAILFSDILILPHTMGLPLEFVPGFGPKF--LRGIESLEDIQVLHTAYQKLEFVYDTL 120
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S +R KL LIGF GAPWT+A+YMI K + +++ Y + + + LLD LS
Sbjct: 121 SSVRAKLEPSKALIGFSGAPWTLATYMIESQGSKTYHKSKKLLYTDPKLLHTLLDMLSTE 180
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG D I +FD+ A L + + + +I ++ + I F K
Sbjct: 181 IIGYLSMQIKAGADAIMLFDSWANALECKAYLEFGWSYIQKITHTLKTMHKTIPIIVFPK 240
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L++ D + G DWS PL A L +QGNL+P RL + M++GV
Sbjct: 241 GISGYLEHLN--GDFDVFGCDWSTPLELAKRILGHRYVLQGNLEPARLY-NQEAMLEGVM 297
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL+V+G P FIFNLGHG+ + ++LV+ V +
Sbjct: 298 HILEVMGKNPGFIFNLGHGMLADLPCTIAIELVRLVHEK 336
>gi|270015170|gb|EFA11618.1| hypothetical protein TcasGA2_TC030590 [Tribolium castaneum]
Length = 330
Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 181/347 (52%), Gaps = 34/347 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++L +G V + P+W+MRQAGRYLPE+ + RK +F ++C TP+ E+TL PI
Sbjct: 8 KNDRLLRAARGEVPDKLPVWVMRQAGRYLPEFMEFRKD-HSFFEICQTPQLACEVTLMPI 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
+RY+ DAAI+FSDILVI ALG V P+T + + LN ++ L +
Sbjct: 67 KRYDLDAAIIFSDILVIPQALGMVVEMKAGI-----PLTLENFHELNKT--GAVDRLKYV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I++ R KL + L GF GAP + + Y + + LL+
Sbjct: 120 GEAITLTRHKLDGKVPLFGFSGAP------------------AKKWLYAYPKIAHKLLEL 161
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR-----RKYP 238
L++V +Y++ Q+ AG ++QIFD++A L + + + + +I +VR +K
Sbjct: 162 LTEVIIDYVVMQVEAGAQILQIFDSNADLLNKELYTKFGLPYLKKIRDSVRLKLNQKKLE 221
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVV 296
+ FAKGA Y L L +G+DW++ L K VQGNLDP L
Sbjct: 222 QVPMVLFAKGAHYCLAEQADL-GYEVLGVDWTLEPQVVRTLLKGKNVTVQGNLDPCALYA 280
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +I V+ +++ GS +I NLGHGI P +++ LV+TV +
Sbjct: 281 PKEELIALVHKMVEEFGSQRYIVNLGHGIYPDAPTESLQTLVETVHN 327
>gi|322378458|ref|ZP_08052910.1| uroporphyrinogen decarboxylase [Helicobacter suis HS1]
gi|321149102|gb|EFX43550.1| uroporphyrinogen decarboxylase [Helicobacter suis HS1]
Length = 339
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 121/339 (35%), Positives = 178/339 (52%), Gaps = 7/339 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G PIW+MRQAGRYL EY++IRK+ KNFLD+C + +TLQP+ +
Sbjct: 3 FIDACLGKQTPYTPIWMMRQAGRYLSEYQEIRKQAKNFLDLCANVDLASTITLQPVEILD 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILFSDIL++ +G + FV GP+ + E + L ++ ++
Sbjct: 63 VDAAILFSDILILPHTMGLPLEFVPGFGPKF--LRGIESLEDIQVLHTAYQKLEFVYDTL 120
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
S +R KL LIGF GAPWT+A+YMI K + +++ Y + + + LLD LS
Sbjct: 121 SSVRAKLEPSKALIGFSGAPWTLATYMIESQGSKTYHKSKKLLYTDPKLLHTLLDMLSTE 180
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
YL QI AG D I +FD+ A L + + + +I ++ + I F K
Sbjct: 181 IIGYLSMQIKAGADAIMLFDSWANALECKAYLEFGWSYIQKITHTLKTMHKTIPIIVFPK 240
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G L++ D + G DWS PL A L +QGNL+P RL + M++GV
Sbjct: 241 GISGYLEHLN--GDFDVFGCDWSTPLELAKRILGHRYVLQGNLEPARLY-NQEAMLEGVM 297
Query: 307 AILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL+V+G P FIFNLGHG+ + ++LV+ V +
Sbjct: 298 HILEVMGKNPGFIFNLGHGMLADLPRTIAIELVRLVHEK 336
>gi|228957446|ref|ZP_04119200.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228977792|ref|ZP_04138176.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis Bt407]
gi|229126478|ref|ZP_04255492.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-Cer4]
gi|229149379|ref|ZP_04277615.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1550]
gi|229177601|ref|ZP_04304978.1| Uroporphyrinogen decarboxylase [Bacillus cereus 172560W]
gi|228605791|gb|EEK63235.1| Uroporphyrinogen decarboxylase [Bacillus cereus 172560W]
gi|228634021|gb|EEK90614.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1550]
gi|228656867|gb|EEL12691.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-Cer4]
gi|228781902|gb|EEM30096.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis Bt407]
gi|228802200|gb|EEM49063.1| Uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|326938814|gb|AEA14710.1| uroporphyrinogen decarboxylase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 323
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|229042916|ref|ZP_04190649.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH676]
gi|228726381|gb|EEL77605.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH676]
Length = 323
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGIHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|289641270|ref|ZP_06473436.1| uroporphyrinogen decarboxylase [Frankia symbiont of Datisca
glomerata]
gi|289508868|gb|EFD29801.1| uroporphyrinogen decarboxylase [Frankia symbiont of Datisca
glomerata]
Length = 319
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 10/323 (3%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGR LPEYR++R LD C P+ E+TLQPIRR+ DAAILFSDI++
Sbjct: 2 WFMRQAGRALPEYRRLRAGTA-MLDSCRDPDMVTEITLQPIRRFRTDAAILFSDIVLPLV 60
Query: 83 ALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
A+G ++ V GP + +PI L L + + + +++ L ++L LI
Sbjct: 61 AIGVDIDIVAGVGPVVAEPIRDG--AALARLRPLAGDDVPYVTEAVHTLVRELGP-TPLI 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAP+T+ASY++ GG + H + + Y + ++ L D L+D++ YL Q+ AGV
Sbjct: 118 GFAGAPFTLASYLVEGGPSRTHARTKQLMYSAPQVWHELADRLADITIGYLRVQVDAGVS 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L E ++ Y R++ A I F G +L
Sbjct: 178 ALQLFDSWAGALDEADYRRYVLPHSRRVLEAFA--GDGVPRIHFGVNTGELLAVMAE-AG 234
Query: 262 SNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL-DVLGSGPFIF 319
++ +G+DW VPL A + VQGNLDP + V+ + V+ + + +F
Sbjct: 235 ADVVGVDWRVPLDEAAHRIGPGRAVQGNLDPTAVFAPRDVLAEKVHDVCSRGAKADGHVF 294
Query: 320 NLGHGITPQVDPKNVLDLVKTVR 342
NLGHG+ P+ DP + +V+ V
Sbjct: 295 NLGHGVLPETDPDVLAHIVELVH 317
>gi|293334721|ref|NP_001169341.1| hypothetical protein LOC100383208 [Zea mays]
gi|224028823|gb|ACN33487.1| unknown [Zea mays]
Length = 338
Score = 359 bits (922), Expect = 3e-97, Method: Composition-based stats.
Identities = 99/322 (30%), Positives = 171/322 (53%), Gaps = 5/322 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ EY+ + K+ +F + + VE+TLQP R + D ILFSDIL A
Sbjct: 1 MMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPWRAFAPDGVILFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G +++GP + P+ ++ IDL + L + +S+ ILR ++ L+G
Sbjct: 61 IGVPFDISDSKGPVIQSPVRSEGQVRELVPIDLDM--LQFVGESLKILRNEIDGKAALLG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y++ GG + + + LL L++ ++Y+I Q+++G
Sbjct: 119 FVGAPWTIATYIVEGGMTNTYTNIKNMCHTAPDVLRCLLSHLAEAISDYIIYQVNSGAQC 178
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
IQIFD+ G L H +E ++ + +I++ ++++ P+ + + G G +L+ + T
Sbjct: 179 IQIFDSWGGQLPPHVWEQWSKPYIKKIVNRIKKECPHVPLVLYRNGNGGLLERMKD-TRV 237
Query: 263 NAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ IGLDW+V ++ + G VQGN+DP L V+ D + ++ G+ I NL
Sbjct: 238 DVIGLDWTVDMADGRKRLGNGISVQGNVDPAFLFSPLPVLTDEIRRVVKAAGTKGHILNL 297
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHG+ + + V RS
Sbjct: 298 GHGVLQKTPEEAVAHFFDVTRS 319
>gi|108799179|ref|YP_639376.1| uroporphyrinogen decarboxylase [Mycobacterium sp. MCS]
gi|108769598|gb|ABG08320.1| uroporphyrinogen decarboxylase [Mycobacterium sp. MCS]
Length = 372
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 119/360 (33%), Positives = 179/360 (49%), Gaps = 24/360 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L +G P+W MRQAGR LPEYR +R + + C+ +
Sbjct: 19 MNTRRELPDSPYLAAARGRKPARVPVWFMRQAGRSLPEYRALRAR-NTMMQACFDADLIT 77
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V A G + V + GP +D P+ T ++
Sbjct: 78 EITLQPVRRHGVDAAILFSDIVVPLRASGIALDIVPDVGPVIDHPVRTAADVAAIRPLER 137
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ Q++ +L L + LIGF GAP+T+ASY++ GG K H +
Sbjct: 138 --QTVEPVEQAVRMLTAAL-GDVPLIGFAGAPFTLASYLVEGGPSKHHEHTKAMMLGAPD 194
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+DV+ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 195 TWHALMSALTDVTIAFLQAQVDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFQALAP 254
Query: 236 KYPNAKFISFAKGAGYMLKNYRRL---TDS-NAIGLDWSVPLSFALELQKEG-PVQGNLD 290
F G +L + + +G+DW L+ A + G +QGNLD
Sbjct: 255 A--GVPMTHFGVGTAELLGAMSEAIATSGAPGVVGVDWRTSLTDAAGRVERGSALQGNLD 312
Query: 291 PMRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+ L+ G V+ V +D G+ +FNLGHG+ P DP+ V V+ V S
Sbjct: 313 PVVLLAGWPVVERAVRAVVEDGRRAVDA-GAAGHVFNLGHGVLPATDPEIVTATVELVHS 371
>gi|288818087|ref|YP_003432435.1| uroporphyrinogen-III decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|288787487|dbj|BAI69234.1| uroporphyrinogen-III decarboxylase [Hydrogenobacter thermophilus
TK-6]
gi|308751689|gb|ADO45172.1| uroporphyrinogen decarboxylase [Hydrogenobacter thermophilus TK-6]
Length = 336
Score = 359 bits (921), Expect = 4e-97, Method: Composition-based stats.
Identities = 107/342 (31%), Positives = 183/342 (53%), Gaps = 11/342 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L ++G I P+WLMRQAGRY+ EYR++R+K ++FL C E V+++L P+
Sbjct: 2 KDSLLLRSIRGEKIERFPVWLMRQAGRYMKEYRELREKERDFLSFCKNVELAVKVSLLPL 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
+ DA I+FSDIL+ + +G + F E EGP + +++ L +++ +
Sbjct: 62 ELLDVDAVIIFSDILIPLEPMGVCIEFKEGEGPVIS--WDRDVKALKRISYKDTDFVNEV 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ + K+ + +IGFCG P+T+ SY+I G KD ++F ++ ++ L+
Sbjct: 120 IKGV----KEAQKDVPVIGFCGGPFTLLSYLIEGRGGKDMKDTKIFMWKQ-EDYHALMSL 174
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D EYL QI AG D++QIFD+ A L ++ +YA + +++ ++R++ N I
Sbjct: 175 LVDNLIEYLKGQILAGADLVQIFDSWAMYLPYEDYRDYAETYLKKLLEGIKREF-NVPII 233
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F +G+G L+ + L + I +DW+V + + QGNLDP L + +
Sbjct: 234 YFYRGSGSFLEAIKDLP-VDVISVDWTVDMLGGMRSVHR-AFQGNLDPHVLYADEETIFK 291
Query: 304 GVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + +IFNLGHG+ P ++ V LV V+S
Sbjct: 292 KTLELLRCVPRKTKYIFNLGHGLMPDMEFNKVKFLVNAVKSF 333
>gi|229195379|ref|ZP_04322148.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1293]
gi|228588078|gb|EEK46127.1| Uroporphyrinogen decarboxylase [Bacillus cereus m1293]
Length = 323
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 108/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQIHAG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQIHAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|167998813|ref|XP_001752112.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696507|gb|EDQ82845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 333
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 175/325 (53%), Gaps = 7/325 (2%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ +K +F + + VE++LQP + + D I+FSDIL A
Sbjct: 1 MMRQAGRYMAVYRKLAEKHPSFRERSENVDLIVEISLQPWKAFRPDGVIIFSDILTPLPA 60
Query: 84 LGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+G E +GP ++ PI ++E + L+P + L+ + + +S+SILR+++ + ++
Sbjct: 61 IGIPFEIDEAKGPLLETPIVSEEGLEALHP---IDLDKVNFVGESLSILREEVGDGAAVL 117
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWT+A+Y++ G + + + + +Q +L L++ AEY+I Q+ AG
Sbjct: 118 GFVGSPWTLATYIVEGKTTRTYTKIKSMTHQQPELLKSILSHLANEIAEYVIFQVKAGAQ 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
IQIFD+ G L H+++ ++ + ++++ VR P + + G G +L+ D
Sbjct: 178 CIQIFDSWGGQLPPHQWDQWSKPYIQQLVAKVRDACPGVPLVMYINGNGGLLERMA-TVD 236
Query: 262 SNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ IGLDW++ ++ L VQGN+DP L + + + +++ G+ I N
Sbjct: 237 VDVIGLDWTIDMADGRRRLGDSIAVQGNVDPAVLFAPLPAITEAIESVVSKAGTNGHILN 296
Query: 321 LGHGITPQVDPKNVLDLVKTVRSEK 345
LGHG+ + V T RS
Sbjct: 297 LGHGVLVGTPEEGVAHFFDTARSLS 321
>gi|196044232|ref|ZP_03111468.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB108]
gi|206976592|ref|ZP_03237498.1| uroporphyrinogen decarboxylase [Bacillus cereus H3081.97]
gi|222094800|ref|YP_002528860.1| uroporphyrinogen decarboxylase [Bacillus cereus Q1]
gi|229137862|ref|ZP_04266461.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST26]
gi|196024871|gb|EDX63542.1| uroporphyrinogen decarboxylase [Bacillus cereus 03BB108]
gi|206745275|gb|EDZ56676.1| uroporphyrinogen decarboxylase [Bacillus cereus H3081.97]
gi|221238858|gb|ACM11568.1| uroporphyrinogen decarboxylase [Bacillus cereus Q1]
gi|228645519|gb|EEL01752.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST26]
Length = 323
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|229160140|ref|ZP_04288141.1| Uroporphyrinogen decarboxylase [Bacillus cereus R309803]
gi|228623351|gb|EEK80176.1| Uroporphyrinogen decarboxylase [Bacillus cereus R309803]
Length = 323
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR+ I GA +++ ++ L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRKV--GVPMIMHGVGAAHLVNEWQDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKEPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|222151795|ref|YP_002560953.1| uroporphyrinogen decarboxylase [Macrococcus caseolyticus JCSC5402]
gi|222120922|dbj|BAH18257.1| uroporphyrinogen decarboxylase [Macrococcus caseolyticus JCSC5402]
Length = 324
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 173/323 (53%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKE-THSLFEITHDPELCAYVTKLPVDQYNTDAAILYKDIMSPLGAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI ++ I + I +I +L + ++ LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSKADVEKLGEIHPE-QDVPYILDTIKLLTTE-QLNVPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG K++ + + Y+ A++ L+D L+D+ Y AQI AG +I
Sbjct: 118 TGAPFTLASYMIEGGPSKNYNKTKAMMYEAPEAWHLLMDKLADMCITYTHAQIDAGCKMI 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ G L ++ + A + RI ++ K +F GA ++++ + L +
Sbjct: 178 QVFDSWVGALNRADYHTFIAPHMERIFKEIKAK--GVPVTTFGVGASHLIEEWNALP-VD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW + + A +L +QGNLDP L+ +V+ + ILD L S +IFNLG
Sbjct: 235 VLGLDWRLQIEEARQLGITKTLQGNLDPAILMAPWEVIESHLKRILDQGLQSNSYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V P + + V
Sbjct: 295 HGVFPEVQPDTLRRVSTFVHDYS 317
>gi|162456911|ref|YP_001619278.1| putative uroporphyrinogen decarboxylase [Sorangium cellulosum 'So
ce 56']
gi|189083024|sp|A9FZW7|DCUP_SORC5 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|161167493|emb|CAN98798.1| putative Uroporphyrinogen decarboxylase [Sorangium cellulosum 'So
ce 56']
Length = 349
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 111/340 (32%), Positives = 172/340 (50%), Gaps = 7/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + + P+W MRQAGRY+ EYR++RKK+ L++C TPE +E+TLQP+ R
Sbjct: 3 DRFLRACRREPTDVTPVWFMRQAGRYMAEYRELRKKY-TLLEICKTPELALEVTLQPL-R 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILF+DIL+ + +G F + EGP + + + L +
Sbjct: 61 LGMDAAILFADILLPLEPMGAPFEFAKGEGPVIHEPVRDRAGIERLRVFEPEEGLGYVLD 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ ++RK+L LIGF GAP+T+ASY++ GG D+ + + + A++ L+ +S
Sbjct: 121 AVRLIRKELDGKTPLIGFAGAPFTMASYLVEGGKSSDYRLTKQLMWSDPEAWSALMGKIS 180
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+V L AQ+ AG +Q+FD+ G L ++ + V I+ + I F
Sbjct: 181 EVVRRLLRAQVAAGAQAVQLFDSWVGSLSIDDYREHVQPHVRYILRDLEAT--GVPVIHF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L+ +R IG+DW PL A + + VQGNLDP+ L V
Sbjct: 239 GTNTGALLEA-QRDAGGTVIGVDWRTPLDKAWQRVGYDRAVQGNLDPLLLCAPRAVAERR 297
Query: 305 VNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
A+L+ G IFNLGHGI P+ V ++ V S
Sbjct: 298 ARAVLEEAGGRAGHIFNLGHGIIPETPVDTVKAVIDLVHS 337
>gi|229154746|ref|ZP_04282861.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 4342]
gi|228628694|gb|EEK85406.1| Uroporphyrinogen decarboxylase [Bacillus cereus ATCC 4342]
Length = 323
Score = 358 bits (920), Expect = 5e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|261408414|ref|YP_003244655.1| uroporphyrinogen decarboxylase [Paenibacillus sp. Y412MC10]
gi|261284877|gb|ACX66848.1| uroporphyrinogen decarboxylase [Paenibacillus sp. Y412MC10]
Length = 352
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 181/345 (52%), Gaps = 11/345 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + + ++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R
Sbjct: 4 NDQFIRACRKQEVDHVPVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ ++G + V+N GP +D PI + ID+ L +
Sbjct: 63 KLGVDAAILYSDIMNPVASIGVDFDIVKNIGPVIDNPIRSAADVEKLRPIDVE-GDLGHV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL K+L + LI F GAP+T+ASY+I G K++ + + Y + + L+D
Sbjct: 122 LETIRILDKEL--DVPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + G Q+FD+ G L +F+ + ++ RI + ++ + I
Sbjct: 180 LGDMVIAYLRAHVANGGKAFQLFDSWVGALSPKDFQTFVLPTIQRIFAELQDL--SVPKI 237
Query: 244 SFA-KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
F +G +L L+ ++ IGLDW V ++ L+ + VQGNLDP L V+
Sbjct: 238 YFPGVSSGELLPTLTDLS-TDVIGLDWRVSITEGRRRLEHKYAVQGNLDPTVLTGPMPVI 296
Query: 302 IDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D F+FNLGHG+ P+ + + +L +
Sbjct: 297 QQYAKEIIDQGIQEPGFVFNLGHGLFPEASLEKLRELTSYIHEYS 341
>gi|229108634|ref|ZP_04238245.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-15]
gi|228674775|gb|EEL30008.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-15]
Length = 323
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR+ I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVVDYRVFIKPAMERIFAEVRKM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|283457691|ref|YP_003362277.1| uroporphyrinogen-III decarboxylase [Rothia mucilaginosa DY-18]
gi|283133692|dbj|BAI64457.1| uroporphyrinogen-III decarboxylase [Rothia mucilaginosa DY-18]
Length = 442
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 120/346 (34%), Positives = 183/346 (52%), Gaps = 10/346 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+L L G + P+W MRQAGR LPEYRQ+R+ LD C TP+ E+T+Q
Sbjct: 101 TTADSPMLRALTGRPSSHRPVWFMRQAGRSLPEYRQVREGIP-MLDACLTPDLAAEITVQ 159
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR+ DA I FSDI++ G NV V +GP +D P+ T + P + + L
Sbjct: 160 PVRRHKVDAGIFFSDIVIPMKLAGVNVDIVPGKGPVLDQPVRTLDEVRDLPELKD--SDL 217
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI ++++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A++ L
Sbjct: 218 DPIREAVAATVEML-GDTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPAAWHEL 276
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ + + ++L AQI AG +Q+FD+ AG LGE ++ Y + VR
Sbjct: 277 AAWAARTAGQFLRAQIEAGASAVQLFDSWAGSLGESDYRRYVQAHSATALDMVREY--GV 334
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQ 299
I F G +L ++ IG+D+ +PLS A L P+QGN+DP L G++
Sbjct: 335 PRIHFGTGTTALLPAMHE-AGADVIGVDYRLPLSAANTLLNGAVPLQGNIDPALLAAGSE 393
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ V+ +L + P + NLGHG+ P DP+ + DLV + +
Sbjct: 394 NLYAHVDEVLAEGNAAPSHVVNLGHGVPPTTDPQVLTDLVAYIHEK 439
>gi|47567548|ref|ZP_00238259.1| uroporphyrinogen decarboxylase [Bacillus cereus G9241]
gi|47555743|gb|EAL14083.1| uroporphyrinogen decarboxylase [Bacillus cereus G9241]
Length = 323
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARTRGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|229131976|ref|ZP_04260840.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST196]
gi|228651480|gb|EEL07451.1| Uroporphyrinogen decarboxylase [Bacillus cereus BDRD-ST196]
Length = 323
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP +D PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDSPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AGV +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGVKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|190566523|ref|ZP_03019440.1| uroporphyrinogen decarboxylase [Bacillus anthracis Tsiankovskii-I]
gi|227816079|ref|YP_002816088.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CDC 684]
gi|190562075|gb|EDV16043.1| uroporphyrinogen decarboxylase [Bacillus anthracis Tsiankovskii-I]
gi|227005079|gb|ACP14822.1| uroporphyrinogen decarboxylase [Bacillus anthracis str. CDC 684]
Length = 323
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALIDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|229056802|ref|ZP_04196203.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH603]
gi|228720543|gb|EEL72109.1| Uroporphyrinogen decarboxylase [Bacillus cereus AH603]
Length = 323
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 109/323 (33%), Positives = 176/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP +D PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AGV +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGVKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGAVNVADYRIFIKPAMERIFAEVRPM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWPVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|329928218|ref|ZP_08282149.1| uroporphyrinogen decarboxylase [Paenibacillus sp. HGF5]
gi|328937986|gb|EGG34386.1| uroporphyrinogen decarboxylase [Paenibacillus sp. HGF5]
Length = 352
Score = 358 bits (918), Expect = 9e-97, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 180/345 (52%), Gaps = 11/345 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + + ++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+TL P+R
Sbjct: 4 NDQFIRACRKQEVDHVPVWYMRQAGRYDPEYRKIKEKY-SLLEICSQPELAAEVTLMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ ++G + V+N GP +D PI ID+ L +
Sbjct: 63 KLGVDAAILYSDIMNPVASIGVDFDIVKNIGPVIDNPIRNAADVEKLRPIDVE-GDLGHV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL K+L + LI F GAP+T+ASY+I G K++ + + Y + + L+D
Sbjct: 122 LETIRILDKEL--DVPLITFAGAPFTIASYLIEGRPSKNYLRTKELMYSEPKVWFSLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + G Q+FD+ G L +F+ + ++ RI + ++ + I
Sbjct: 180 LGDMVIAYLRAHVANGGKAFQLFDSWVGALSPKDFQTFVLPTIQRIFAELQDL--SVPKI 237
Query: 244 SFA-KGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVM 301
F +G +L L+ ++ IGLDW V ++ L+ + VQGNLDP L V+
Sbjct: 238 YFPGVSSGELLPTLTDLS-TDVIGLDWRVSIAEGRRRLEHKYAVQGNLDPTVLTGPMPVI 296
Query: 302 IDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D F+FNLGHG+ P+ + + +L +
Sbjct: 297 QQYAKEIIDQGIQEPGFVFNLGHGLFPEASLEKLRELTSYIHEYS 341
>gi|313673714|ref|YP_004051825.1| uroporphyrinogen decarboxylase [Calditerrivibrio nitroreducens DSM
19672]
gi|312940470|gb|ADR19662.1| uroporphyrinogen decarboxylase [Calditerrivibrio nitroreducens DSM
19672]
Length = 336
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 189/343 (55%), Gaps = 15/343 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++VL G ++ PP+WLMRQAGRY+PEY ++R+K FL++C PE ++T QP+
Sbjct: 2 NNLLIDVLDGKKVDRPPVWLMRQAGRYMPEYMEVRRKV-TFLELCKNPELAAKVTHQPVD 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
DAAILFSDIL+ + +G + F P + +P+ TQ+ ++ + +
Sbjct: 61 ILGVDAAILFSDILIPVEPMGVKLDFDPA--PVISNPVRTQKDVDRLTILE-PYKDVPFV 117
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ +L K L ++ LIGF GAP+T+A YM+ GG K+ + + + + ++F+ L++
Sbjct: 118 VETVKLLVKDL--NVPLIGFSGAPFTLACYMVEGGGSKNFIEIKRMMHNDYKSFSTLMEK 175
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+ + +YL AQI G V+QIFDT AG L E+ V ++ ++ NA +
Sbjct: 176 LTISTIKYLQAQIDNGCPVVQIFDTWAGILSPCEYAEMVLPFVNILVDNLK----NAHVV 231
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG--PVQGNLDPMRLVVGNQVM 301
FAK + K L + IG+DW + L A G +QGN+DP+ L + +
Sbjct: 232 YFAKDSATFYKYISNL-KCSCIGVDWKIELDEADMQLGTGKFVLQGNMDPVILFTNREKI 290
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ I+D S IFNLGHGI P +NV LV+ +++
Sbjct: 291 MNIAKLIVDKGKSLKGHIFNLGHGILPNTPVENVKYLVELIKN 333
>gi|251796117|ref|YP_003010848.1| uroporphyrinogen decarboxylase [Paenibacillus sp. JDR-2]
gi|247543743|gb|ACT00762.1| uroporphyrinogen decarboxylase [Paenibacillus sp. JDR-2]
Length = 356
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 111/344 (32%), Positives = 179/344 (52%), Gaps = 9/344 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ + + +++ P+W MRQAGRY PEYR+I++K+ + L++C PE E+T+ P+R
Sbjct: 4 NDRFIRACRKELVDTVPVWYMRQAGRYDPEYRKIKEKY-SLLEICKQPELAAEVTMMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ ++G + V N GP + +PI T ID+ L +
Sbjct: 63 KLGVDAAILYSDIMNPVASIGIDFDIVANIGPVIHNPIRTAADVERLTPIDVE-GDLGHV 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I IL K+L + LI F GAP+T+ASY+I G K++ + + Y + + L+D
Sbjct: 122 LETIRILDKEL--EVPLITFAGAPFTIASYLIEGKPSKNYLRTKALMYGEPKVWFSLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + +G Q+FD+ G L +F + ++ RI + + P K
Sbjct: 180 LGDMVIAYLRAHMASGGKAFQLFDSWVGALTPADFSKFVLPTIERIFAEL-SDLPQPKIY 238
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMI 302
+G +L R L ++ IGLDW V + L + VQGNLDP+ L V+
Sbjct: 239 FPGVSSGELLPELRNL-KADVIGLDWRVSIPEGRRRLDGKYAVQGNLDPVILTAPMSVIE 297
Query: 303 DGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+D F+FNLGHG+ P+ + + +L + S
Sbjct: 298 SYAAEIIDQGIQQPGFVFNLGHGLFPEASLEKLTELTAFIHSYS 341
>gi|15604713|ref|NP_221231.1| uroporphyrinogen decarboxylase [Rickettsia prowazekii str. Madrid
E]
gi|6225244|sp|Q9ZC83|DCUP_RICPR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3861408|emb|CAA15307.1| UROPORPHYRINOGEN DECARBOXYLASE (hemE) [Rickettsia prowazekii]
gi|292572550|gb|ADE30465.1| Uroporphyrinogen decarboxylase [Rickettsia prowazekii Rp22]
Length = 345
Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats.
Identities = 134/338 (39%), Positives = 202/338 (59%), Gaps = 6/338 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++IL L+ N PIW MRQAGRYLPEY+++R+ KNFLD CY E+TLQPIRR
Sbjct: 2 KQILNPLK--NSNKIPIWFMRQAGRYLPEYKKVRETTKNFLDFCYDVNKATEVTLQPIRR 59
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL-LNPNIDLFLNYLLPIF 124
Y DAAI+FSDILV+ +ALG V F EN GP + +Q+ + L + + L + I
Sbjct: 60 YGLDAAIIFSDILVLPNALGWEVDFKENIGPVLKQFKSQKDFQYLQRDSNNKLEKVYKII 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++KLP++ +LIGF G+PWTV SYM+ G +D ++ F Y+N LL+F+
Sbjct: 120 ---KKVKEKLPSNTSLIGFAGSPWTVMSYMLEGKGKRDFRTSKKFIYENKILAKDLLNFI 176
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
++ +++YLI Q+ +GVD+++IFD+ +G L E +F + +II V+ + I+
Sbjct: 177 TEKTSDYLINQVKSGVDLLKIFDSWSGVLAEDDFTEFVIEPTKKIILKVKEVFVKTPIIT 236
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F KGAG + + + + + +D VPL E + +QGNLDP+ L+ +++ +
Sbjct: 237 FPKGAGLLYEKFIEEVPIDILAVDQMVPLEKMKEWSNKVIIQGNLDPVILLTNKEIIKEK 296
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
IL + FIFNLGHGI P+ P+NV L + VR
Sbjct: 297 TYKILQAMKGKNFIFNLGHGILPETHPENVEFLTQYVR 334
>gi|253573268|ref|ZP_04850611.1| uroporphyrinogen decarboxylase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846796|gb|EES74801.1| uroporphyrinogen decarboxylase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 353
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 114/345 (33%), Positives = 185/345 (53%), Gaps = 11/345 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++ L+ ++ P+W MRQAGRY P+YR+I++K+ + L++C PE E+T+ P+R
Sbjct: 4 NDRLIRALRKQEVDRLPVWYMRQAGRYDPDYRKIKEKY-SLLEICRQPELAAEVTMMPVR 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+ DAAIL+SDI+ +LG V+N GP ++ PI T ID+ + L I
Sbjct: 63 KLGVDAAILYSDIMNPVASLGVKFDIVKNFGPVIEQPIRTLADIERLRPIDVHKD-LSHI 121
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I+IL K+L + LI F GAP+T+ASY+I G K + + + Y + A+ L+D
Sbjct: 122 LETIAILDKEL--DVPLITFAGAPFTIASYLIEGRPSKSYSRTKAMMYGDPEAWFKLMDK 179
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L D+ YL A + +G Q+FD+ G L +F+ Y ++ RI + ++ + I
Sbjct: 180 LGDMVITYLRAHVESGGKAFQLFDSWVGALAPKDFQRYVLPTITRIFAELQDL--DVPKI 237
Query: 244 SFA-KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVM 301
F +G +L + ++AIGLDW V +S + +QGNLDP L V+
Sbjct: 238 YFPGVSSGELLPTLTDIA-ADAIGLDWRVSISEGRRRTGGKFAMQGNLDPYVLTAPMDVI 296
Query: 302 IDGVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
I+ D L + F+FNLGHG+ P+ + +L + V
Sbjct: 297 KAQAKEIIDDGLNAPGFVFNLGHGLFPEASLDKLRELTEFVHEYS 341
>gi|294085208|ref|YP_003551968.1| uroporphyrinogen decarboxylase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664783|gb|ADE39884.1| uroporphyrinogen decarboxylase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 341
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 130/339 (38%), Positives = 187/339 (55%), Gaps = 2/339 (0%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
L+ L G + PPIW+MRQAGRYL EYR IR+ +F+ C E +T+QPI R+
Sbjct: 4 FLKTLAGQKMPIPPIWMMRQAGRYLKEYRDIRETTPDFISFCLDAEKASNVTIQPIVRFG 63
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
FDAAI+FSDIL++ AL RNVRF N GP +DP+ D+ L P+ +I
Sbjct: 64 FDAAIIFSDILMVPWALDRNVRFKPNHGPMLDPLADAASLDEALLADV-PTKLAPVANAI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R L + LIGF GAPWTV +YM+ GG KD +R + + F+ ++D ++
Sbjct: 123 TRTRSLLRDDTALIGFAGAPWTVMTYMLEGGSSKDFNLSRQMLWNDPAGFDKIMDIVTQA 182
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ E+L Q HAG D + +FD+ A + + + II+A+R + + I F K
Sbjct: 183 TIEFLCLQAHAGADALMLFDSWASAVPSWHRDAVVNKPAATIIAALRARGISQPVIGFPK 242
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVN 306
G G + Y +A+GLD + + +A + PVQGNLDP+ L+ G+ VM+ ++
Sbjct: 243 GIGEGILPYVDQVGVDALGLDHGMDIRWAHKNLPAYLPVQGNLDPISLLSGDDVMLANID 302
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL V P IFNLGHGITP NV ++ VR +
Sbjct: 303 DILGVFADRPHIFNLGHGITPATPIANVTKMITHVRQAR 341
>gi|168000031|ref|XP_001752720.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696251|gb|EDQ82591.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 387
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 101/342 (29%), Positives = 161/342 (47%), Gaps = 4/342 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ +L V +G P+WLMRQAGRY+ ++R+ + +F + T + +EL+LQP
Sbjct: 30 EPLLLRVARGEEAERTPVWLMRQAGRYMADFRKFSDRI-SFRERSETADIAIELSLQPWL 88
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ D I+FSDIL ALG V+ +GP + P+ T E +D L I
Sbjct: 89 AFRTDGVIMFSDILTPLPALGIEFTMVKGKGPVIPSPVRTLEDIQNLRTLDDPDQSLPFI 148
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q +S LRK++ TLIGF G PWT+A+Y + G K+ + + N + L
Sbjct: 149 RQILSSLRKEVEGKATLIGFIGTPWTLAAYAMEGSSDKNLIKTKSIMMHNPEILHAFLAH 208
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D Y+ QI +G ++Q+FD+ A L +F ++ ++I V+ P+ I
Sbjct: 209 LTDALVTYVCHQIDSGAQIVQLFDSWAHHLSPEQFSEFSWPYAEQLIDRVKIARPDVPLI 268
Query: 244 SFAKGAGYMLKNYRRLTDSN-AIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
A G L + + +GLDW+ + A L + +QGN+DPM L V+
Sbjct: 269 FHANGGTGKLHIVAQRKHQDVVVGLDWATEMREARSLLGPKTVLQGNVDPMVLFGSEDVI 328
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G I N+GHG+ ++V + R
Sbjct: 329 RRAAEQNIRDAGGNYHILNVGHGVVQGTPEESVKLFCQVARE 370
>gi|163839966|ref|YP_001624371.1| uroporphyrinogen decarboxylase [Renibacterium salmoninarum ATCC
33209]
gi|162953442|gb|ABY22957.1| uroporphyrinogen decarboxylase [Renibacterium salmoninarum ATCC
33209]
Length = 378
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 116/344 (33%), Positives = 182/344 (52%), Gaps = 10/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ ++ G + P+W MRQAGR LPEYR++R+ + LD C P+ E+TLQP
Sbjct: 31 TTESPLIMAYSGKTPSRRPVWFMRQAGRSLPEYRKVREGI-SMLDSCLKPDLASEITLQP 89
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR++ DAAI FSDI++ G V V GP ++ P+ T P + + L
Sbjct: 90 VRRHDVDAAIFFSDIVIPLKLAGVGVDIVPGVGPVLEKPVRTLADVRALPKLTE--DSLE 147
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI Q++++ +L + LIGF GAP+T+A+YM+ G +DH R + + +A+ L
Sbjct: 148 PIRQAVALTVAEL-GNTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPQAWQELA 206
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ +D S +L AQ+ AG Q+FD+ AG LG +++ + A + + + VR A
Sbjct: 207 AWAADASGMFLRAQLEAGASAAQLFDSWAGSLGLSDYQTHVAPASKQALDHVRDL--GAP 264
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G +L R + + IG+D+ +PL A L P+QGN+DP L V
Sbjct: 265 LIHFGTGTSELLLAMRDV-GVDVIGVDYRLPLDEANRRLGGMTPLQGNIDPALLPAPWPV 323
Query: 301 MIDGVNAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +L S P + NLGHG+ P+ DP + +V+ V S
Sbjct: 324 LEAHILDVLRRGESAPGNVVNLGHGVPPETDPSVLSRIVELVHS 367
>gi|229095670|ref|ZP_04226651.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-29]
gi|229114623|ref|ZP_04244037.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-3]
gi|228668688|gb|EEL24116.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock1-3]
gi|228687802|gb|EEL41699.1| Uroporphyrinogen decarboxylase [Bacillus cereus Rock3-29]
Length = 323
Score = 356 bits (915), Expect = 2e-96, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ RI + VR I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVVDYRVFIKPAMERIFAEVRTM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVYKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|291234861|ref|XP_002737366.1| PREDICTED: updo-like [Saccoglossus kowalevskii]
Length = 320
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 116/346 (33%), Positives = 176/346 (50%), Gaps = 47/346 (13%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL +G P+W+MRQAGRYLPE++++R + F +C TP E+TLQPI
Sbjct: 14 KNDLILRAARGEKTEKTPVWVMRQAGRYLPEFKEMRAE-NEFFHVCQTPSLACEVTLQPI 72
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT-TQEIYLLNPNIDLFLNYLL 121
+R++ DAAI+FSDILVI ALG V+ + +GP D PIT ++ L N+D+ L
Sbjct: 73 KRFDLDAAIIFSDILVIPQALGLEVQMIPGKGPTFDDPITKVSDLGRLKKNVDVN-ESLG 131
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++IS+ R KL + LIGF G+PWT+ SY I GG ++ + YQN A + L
Sbjct: 132 YVFEAISLTRHKLEGKVPLIGFAGSPWTLMSYSIEGGGSTTFSSSKAWLYQNVDASHQFL 191
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
++DV+ ++L+ Q+ AG
Sbjct: 192 QLITDVTVDFLVGQVLAGAQ---------------------------------------- 211
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I FAKGA Y L + ++ + + +DW+V A E+ +QGNLDP + +
Sbjct: 212 -IIFAKGAHYALSELSQ-SNYDVVSIDWTVKPKCARQEVADRVSLQGNLDPCAIHSSKEE 269
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V ++ G+ +I NLGHGI P DP++V V V +
Sbjct: 270 ISNSVKKMISEFGTQKYIANLGHGIYPTADPEHVEAFVNAVHKHSL 315
>gi|328793755|ref|XP_001122233.2| PREDICTED: uroporphyrinogen decarboxylase [Apis mellifera]
Length = 346
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 117/350 (33%), Positives = 175/350 (50%), Gaps = 24/350 (6%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL+ ++G PIW+MRQAGRYLPE+++IR K +F +C TP E+TLQPI
Sbjct: 10 KNDLILKAIRGESTERIPIWIMRQAGRYLPEFQEIRSK-HDFFSICQTPTLACEVTLQPI 68
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI---TTQEIYLLNPNIDLFLNYL 120
+R++ DA I+FSDILVI A+G V + GP + T + L+ PN++ L Y
Sbjct: 69 KRFDLDAGIIFSDILVIPQAMGLTVEMIPGMGPVLPKPLKDPTDLVRLIQPNVEKDLKY- 127
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I++ R KL + LIGF GA WT+ SYMI GG + R + Y+ + L
Sbjct: 128 --VGDAITLTRYKLEGKVPLIGFTGAAWTLMSYMIQGGGSSTMIRAREWLYKYPDDSHKL 185
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
L +++V +YL+ Q+ AG E Y+ + + I VR++
Sbjct: 186 LQLITNVIIDYLVMQVKAGAQXXXX----------XXXEIYSFKYLKEISEKVRQRLKKE 235
Query: 238 --PNAKFISFAKGAG-YMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMR 293
P I+F KGA L+ + +GLDW++ A + E +QGN DP
Sbjct: 236 NIPEVPMIAFPKGATINSLEMLAKSKTYEVLGLDWTIDPIEARKKFGSEIILQGNFDPCA 295
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L Q +I+ + G +I NLGHGI P +V +K + S
Sbjct: 296 LYGSEQEIINRAKDMALKFGKIRYIANLGHGILPDTPIASVTAFIKGIHS 345
>gi|237785639|ref|YP_002906344.1| uroporphyrinogen decarboxylase [Corynebacterium kroppenstedtii DSM
44385]
gi|237758551|gb|ACR17801.1| uroporphyrinogen decarboxylase [Corynebacterium kroppenstedtii DSM
44385]
Length = 384
Score = 356 bits (913), Expect = 3e-96, Method: Composition-based stats.
Identities = 111/369 (30%), Positives = 178/369 (48%), Gaps = 30/369 (8%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L+ G + P+W MRQAGR LPEYR++R+ L+ C+TP+ E+TLQ
Sbjct: 20 TLSQSSLLDAAYGATPHHRPVWFMRQAGRSLPEYRKLRENIG-MLEACFTPDAAAEITLQ 78
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR+N DAAI FSDI+V A G V V GP +D PI ++ P +D + +
Sbjct: 79 PVRRHNVDAAIFFSDIVVPLKAAGIGVEIVAGRGPIVDHPIRSRADIDSLPELD--PDSI 136
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I +++ + +L + LIGF GAP+T+ASY+I GG K H + + + +++ L
Sbjct: 137 SSIGEAVREIIGELRDDQALIGFAGAPFTIASYLIEGGPSKTHQHTKAMMHADPDSWHAL 196
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK---- 236
+ L+D +L QI G+D +Q+FD+ AG L ++ + A I V +
Sbjct: 197 MRVLTDYIKVFLGVQIDGGIDAMQLFDSWAGYLHARDYNDLVAPYSAEIFRFVSERSSRG 256
Query: 237 -YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-------------QKE 282
I F G +L + + T + +G+DW V ++ A +
Sbjct: 257 GRRPIPRIHFGVTTGELLGSMAQ-TGPDVMGVDWRVDMATAAQRINVALADKNGEAGSGA 315
Query: 283 GPVQGNLDPMRLVVGNQVMIDG-------VNAILDVLGSGPFIFNLGHGITPQVDPKNVL 335
+QGN+DP L G + + + ++ I NLGHG+ DP +
Sbjct: 316 ITLQGNIDPALLFAGKEAVDKEINHLLTTTDQLISEGKISGHIVNLGHGVLADTDPDVIS 375
Query: 336 DLVKTVRSE 344
+V+ V S
Sbjct: 376 HIVEKVHSW 384
>gi|294933075|ref|XP_002780585.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
gi|239890519|gb|EER12380.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
Length = 370
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 111/348 (31%), Positives = 187/348 (53%), Gaps = 8/348 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ ++L +G ++ P+W+MRQAGRYLPE++++R + +F+ +C P+ E+T+QP
Sbjct: 26 KQNRLLRAARGEEVDEIPVWIMRQAGRYLPEFKELRAE-HDFVKVCQDPDLASEVTIQPY 84
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYL 120
RR+N DA I+FSDIL I +G+++ V +GP + P T ++I + L
Sbjct: 85 RRFNKLDACIVFSDILTIPMLMGQHLEMVPGKGPVLSPKLETPEDIERILNLKPNVGEGL 144
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ +I KL N +T+IGFCGAPW++ YM+ GG K + R + Y +
Sbjct: 145 AYVYDAIFATVSKLENQLTVIGFCGAPWSLFCYMVEGGGSKTWAKARTWLYSYPEDAKRV 204
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ ++D+ EYL+ Q AG ++Q+FDT+ G + + + RI + V+R+ P+A
Sbjct: 205 MAAITDICIEYLVNQYDAGAKILQVFDTNGGEITPACYAQFCLEDFKRIPAEVKRQRPDA 264
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F K + + +AI + W P A + +QGNLDP L V
Sbjct: 265 LVIGFPKDVQDLTSF--EDSAYDAISVSWRKPADEARRDLPDKVLQGNLDPAMLYSSAAV 322
Query: 301 MIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ D V A ++ G G +I NLGHG+ P + P+ + + ++S K+
Sbjct: 323 VKDAVVANVNAFGGGHSKYIANLGHGMMPDMTPEMAGNFIDAIKSIKL 370
>gi|229068727|ref|ZP_04202024.1| Uroporphyrinogen decarboxylase [Bacillus cereus F65185]
gi|228714344|gb|EEL66222.1| Uroporphyrinogen decarboxylase [Bacillus cereus F65185]
Length = 323
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 106/323 (32%), Positives = 175/323 (54%), Gaps = 8/323 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR PEYR+I++K+ + ++ + PE +T P+ +YN DAAIL+ DI+ A+
Sbjct: 1 MRQAGRSQPEYRKIKEKY-SLFEITHNPELCAYVTKLPVDQYNVDAAILYKDIMSPLPAI 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V GP + +PI + + I+ + + I +I +L ++ + + LIGF
Sbjct: 60 GVDVEIKSGIGPVIDNPIRSLQDVEKLGEINPE-DDVPYILDTIRLLTTEMLD-VPLIGF 117
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASYMI GG +++ + F Y +A+ L+D L+D+ YL AQI+AG +
Sbjct: 118 SGAPFTLASYMIEGGPSRNYHNTKAFMYAEPKAWFALMDKLADMVITYLKAQINAGAKAV 177
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ G + ++ + ++ I + VR+ I GA +++ + L +
Sbjct: 178 QIFDSWVGTVNVADYRVFIKPAMELIFAEVRKM--GVPMIMHGVGAAHLVNEWHDLP-LD 234
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLG 322
+GLDW +P+ A VQGN+DP L+ V+ + V ILD + +IFNLG
Sbjct: 235 VVGLDWRLPIEEARARGVHKAVQGNMDPSFLLAPWSVIEEHVKGILDQGMKQPGYIFNLG 294
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
HG+ P+V+P + L +
Sbjct: 295 HGVFPEVNPDTLKRLTTFIHEYS 317
>gi|319441609|ref|ZP_07990765.1| uroporphyrinogen decarboxylase [Corynebacterium variabile DSM
44702]
Length = 335
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 171/339 (50%), Gaps = 24/339 (7%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W+MRQAGR LPEYR++R LD C+ P+ E+TLQP+RR++ DAAILFSDI+V
Sbjct: 2 WMMRQAGRSLPEYRELRAGV-EMLDSCFRPDLLSEITLQPVRRHDADAAILFSDIVVPLK 60
Query: 83 ALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
A G V V GP ++ P+ T P ++ L + + I + +L + LI
Sbjct: 61 AAGVAVDIVPGRGPVLEHPVRTPADIAALPTVE--PGQLESVVEGIGGVLDELRDDQVLI 118
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAP+T+ASY+I GG K+HG + Y + ++ L++ L+ +L Q+ AG+D
Sbjct: 119 GFAGAPFTLASYLIEGGPSKNHGITKSLMYSEPQTWHALMEKLTPTVITFLRTQLEAGID 178
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L ++ + A RI AVR I F +L +
Sbjct: 179 ALQLFDSWAGFLSLKDYREFVAPYSQRIFDAVRPY--GVPMIHFGVNTAELLGEMAAV-G 235
Query: 262 SNAIGLDWSVPLSFA----------LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI--- 308
+ IG+DW PL A L+ +QGNLDP L+ G +V+ V I
Sbjct: 236 PDIIGVDWKTPLDVAAARVTADLRDRGLRVPRAIQGNLDPAVLLAGPEVIAGHVRRICAE 295
Query: 309 ----LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + IFNLGHG+ P+ DP + V +
Sbjct: 296 GDAAIAAGNATGHIFNLGHGVLPETDPDAITRAFAEVHA 334
>gi|255326982|ref|ZP_05368058.1| uroporphyrinogen decarboxylase [Rothia mucilaginosa ATCC 25296]
gi|255296199|gb|EET75540.1| uroporphyrinogen decarboxylase [Rothia mucilaginosa ATCC 25296]
Length = 393
Score = 355 bits (912), Expect = 4e-96, Method: Composition-based stats.
Identities = 120/345 (34%), Positives = 182/345 (52%), Gaps = 10/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+L L G + P+W MRQAGR LPEYRQ+R+ LD C TP+ E+T+Q
Sbjct: 51 TTADSPMLRALTGRPSSHRPVWFMRQAGRSLPEYRQVREGIP-MLDACLTPDLAAEITVQ 109
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYL 120
P+RR+ DA I FSDI++ G NV V +GP +D P+ T + P + + L
Sbjct: 110 PVRRHKVDAGIFFSDIVIPMKLAGVNVDIVPGKGPVLDQPVRTLDEVRALPELKD--SDL 167
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
PI ++++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A++ L
Sbjct: 168 DPIREAVAATVEML-GDTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPAAWHEL 226
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ + + ++L AQI AG +Q+FD+ AG LGE ++ Y + VR
Sbjct: 227 AAWAARTAGQFLRAQIEAGASAVQLFDSWAGSLGEGDYRRYVQAHSATALDMVREY--GV 284
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQ 299
I F G +L ++ IG+D+ +PLS A L P+QGN+DP L G++
Sbjct: 285 PRIHFGTGTTALLPAMHE-AGADVIGVDYRLPLSAANTLLNGAVPLQGNIDPALLAAGSE 343
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V+ +L + P + NLGHG+ P DP+ + DLV +
Sbjct: 344 NLYAHVDEVLAEGNAAPSHVVNLGHGVPPTTDPQVLTDLVAYIHE 388
>gi|256833693|ref|YP_003162420.1| uroporphyrinogen decarboxylase [Jonesia denitrificans DSM 20603]
gi|256687224|gb|ACV10117.1| uroporphyrinogen decarboxylase [Jonesia denitrificans DSM 20603]
Length = 353
Score = 355 bits (912), Expect = 5e-96, Method: Composition-based stats.
Identities = 112/341 (32%), Positives = 179/341 (52%), Gaps = 8/341 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ +G + P+W MRQAGR LPEY R+ L+ C P+ E+T+QP+RR
Sbjct: 17 SSLVRAFRGLPHDHIPVWFMRQAGRSLPEYIAARRGIG-MLESCLRPDLAAEITMQPVRR 75
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
+N DAAI FSDI++ G +V V GP + PI TQ ++ L + L PI
Sbjct: 76 HNVDAAIFFSDIVIPLRLAGVDVDIVSGVGPVLGSPIRTQADLDALESLTLTEDALAPIR 135
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++I+++ +L + LIGF GAP+T+A+YM+ G +DH R + L+ +
Sbjct: 136 EAITLITAELGSR-PLIGFAGAPFTLAAYMVEGRPSRDHLAARHMMVGQPDLWARLMTWC 194
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ V+ ++L QI +G Q+FD+ AG L + + A + R+ + + + I
Sbjct: 195 ARVTGQFLRTQILSGASAAQLFDSWAGSLSRDLYVAHVAPASARVFAHISDL--DVPRIH 252
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMID 303
F G++L + R + + IG+D+ PLS A L P+QGN+DP L V+ D
Sbjct: 253 FGTHTGHLLTDMREV-GATVIGVDYRTPLSEANAILGGTTPLQGNIDPAYLGAPWPVLED 311
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V A+++ + P + NLGHG+ P DP + +V+ V S
Sbjct: 312 HVRAVVESGRAAPGHVVNLGHGVPPTTDPTVLTRIVELVHS 352
>gi|167463588|ref|ZP_02328677.1| uroporphyrinogen decarboxylase [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383218|ref|ZP_08057029.1| uroporphyrinogen decarboxylase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321152487|gb|EFX45273.1| uroporphyrinogen decarboxylase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 357
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 9/348 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M L + I+ P+W MRQAGRY P+YR+I++ + L++C PE E+T+
Sbjct: 1 MKGMNDLFLRACRRESIDTVPVWYMRQAGRYDPDYRKIKESY-TLLEICRQPELAAEVTM 59
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY 119
P+++ DAAIL+SDI+ +LG V+N GP ++ P+ T + ID+
Sbjct: 60 MPVKKLGVDAAILYSDIMNPVASLGVKFDIVKNIGPVIEHPLRTSKDVETLRPIDVD-GD 118
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L I ++I IL ++L + LI F GAP+T+ASY+I G K + Q + Y + +
Sbjct: 119 LPHIMETIRILDREL--TVPLITFAGAPFTIASYLIEGRPSKSYIQTKTMMYSQPKVWFA 176
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L++ L ++ YL AQI G IQ+FD+ G L +F Y ++ RI ++ +
Sbjct: 177 LMEKLGNMIIAYLKAQIANGAKAIQLFDSWVGTLSPEDFSFYVLPTIERIFEDIQDQ--P 234
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGN 298
I F + L R ++ IGLDW V + + VQGNLDP L
Sbjct: 235 VPKIYFPGVSSGELLPVLRHLKADVIGLDWRVSVEEGRKRLDHTFAVQGNLDPYVLTAPM 294
Query: 299 QVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ AI+D F+FNLGHG+ P+ + +L V
Sbjct: 295 PLIQAKAKAIIDQGIQRPGFVFNLGHGLFPEASLDKLRELTDFVHEYS 342
>gi|296131258|ref|YP_003638508.1| uroporphyrinogen decarboxylase [Cellulomonas flavigena DSM 20109]
gi|296023073|gb|ADG76309.1| uroporphyrinogen decarboxylase [Cellulomonas flavigena DSM 20109]
Length = 354
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 109/343 (31%), Positives = 174/343 (50%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ G P+W MRQAGR LPEYR R LD C P+ E+TLQP+R
Sbjct: 16 DSALVTAYSGTRPERLPVWFMRQAGRSLPEYRASRAGTA-MLDACLDPDLASEITLQPVR 74
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNI-DLFLNYLLP 122
R+ DAA+ FSDI+V +G +V V GP + P+ T + ++ L L P
Sbjct: 75 RHGVDAAVFFSDIVVPLRLVGVDVEIVPGTGPVIGTPVRTLDDVARLRDLGPLDAERLAP 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + +L + L+GF GAP+T+A+Y++ GG +DH R + + A+ L+D
Sbjct: 135 VAAGVERTVAQL-DRTPLVGFAGAPFTLAAYLVEGGPSRDHLAARRLMHADPAAWAALMD 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ ++V+ ++ AQ+ AG Q+FD+ AG L ++ + A + R+++ R
Sbjct: 194 WTAEVTGAFVAAQVTAGASAAQLFDSWAGALSLADYTTHCAPASARVLAQARAL--GVPT 251
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
+ F G +L R ++ +G+D+ VPL A L P+QGN+DP L V+
Sbjct: 252 VHFGVATGELLVAMRD-AGADVMGVDYRVPLDEASRRLGGGTPLQGNVDPALLAAPWDVL 310
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ + P + NLGHG+ P+ DP + LV+ V S
Sbjct: 311 EAHVRDVVRRGAAAPAHVVNLGHGVPPETDPTVLTRLVQLVHS 353
>gi|304570645|ref|YP_832251.2| uroporphyrinogen decarboxylase [Arthrobacter sp. FB24]
Length = 373
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 172/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +G P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+R
Sbjct: 35 DSPLITAYRGGKPTRRPVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELASEITLQPVR 93
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAI FSDI++ G V V GP +D P+ T E P L L PI
Sbjct: 94 RHDVDAAIFFSDIVIPLKLAGVGVDIVPGVGPVLDKPVRTAEDVAALP--QLTWEALEPI 151
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L LIGF GAP+T+A+YM+ G +DH R + + +N L ++
Sbjct: 152 REAVRLTVAQL-GKTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANW 210
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D S +L AQ+ AG Q+FD+ AG LG +++ + A + R + VR + A I
Sbjct: 211 AADASGMFLRAQLEAGASAGQLFDSWAGSLGLADYKRFVAPASARALDHVR--HLGAPLI 268
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L R + + +PL A L P+QGN+DP L V+
Sbjct: 269 HFGTGTSELLVAMRDVGVDVVGVD-YRLPLDEANRRLGGTVPLQGNIDPALLSAPWAVLE 327
Query: 303 DGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ + + NLGHG+ P+ DP + +V+ + S
Sbjct: 328 AHVREVIKAGSFAPGHVLNLGHGVPPETDPDVLTRVVELIHS 369
>gi|303230314|ref|ZP_07317079.1| uroporphyrinogen decarboxylase [Veillonella atypica ACS-049-V-Sch6]
gi|302515025|gb|EFL57002.1| uroporphyrinogen decarboxylase [Veillonella atypica ACS-049-V-Sch6]
Length = 348
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 176/343 (51%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+++QG P+W MRQAGR YR+I++K+ F ++ PE ++T P++
Sbjct: 2 NTAYLDMIQGKNPGITPVWYMRQAGRSQAAYRKIKEKYTLF-EITKQPELCAQVTELPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
Y DAAIL+ DI+ A+G NV GP D PI E D + I
Sbjct: 61 EYGVDAAILYKDIMSPMVAIGVNVDIKPGVGPVFDTPIRRMEDIERLYAFDAT--KVEYI 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ + + LIGFCGAP+T+ASY+I GG K + + R +N L++
Sbjct: 119 SKTIELLTTEVLD-VPLIGFCGAPFTIASYLIEGGPTKSYNKTRGMLISEPEIWNRLMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S EYL Q AG + +QIFD+ G + E+E + RIIS V+ ++PN
Sbjct: 178 LADMSIEYLSMQARAGANALQIFDSWVGAVNSTEYEQAIFPHMKRIISTVKSRFPNLPLA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + +L + I LDW L A + VQGNLDP L + +
Sbjct: 238 MNGVGTDHLISTWAKLP-LDVIALDWRSSLGAAKDRGVTQTVQGNLDPAYLYGDTKTIAK 296
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ IL D + G +FNLGHG+ P+ DP + L V +
Sbjct: 297 VVDEILMDGVRHGKHVFNLGHGVFPEADPAKLHWLTDYVHEKS 339
>gi|317508454|ref|ZP_07966124.1| uroporphyrinogen decarboxylase [Segniliparus rugosus ATCC BAA-974]
gi|316253301|gb|EFV12701.1| uroporphyrinogen decarboxylase [Segniliparus rugosus ATCC BAA-974]
Length = 363
Score = 354 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 117/349 (33%), Positives = 171/349 (48%), Gaps = 15/349 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
L L G+ + P+W MRQAGR LPEYR +R ++ L C PE E+TLQP+RR
Sbjct: 20 SPFLVALAGDRPSRRPVWFMRQAGRSLPEYRALRAG-RDMLATCLDPELVCEITLQPVRR 78
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIF 124
+ DAAILFSDI+V G V GP +D P+ + P L P+
Sbjct: 79 HGVDAAILFSDIVVPLKTAGVGVTIKPGVGPVLDAPVRARADVDALPPP--SPEGLEPVA 136
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ L +L LIGF GAP+T+ASY++ GG K H + + F LLD L
Sbjct: 137 SAVGSLIAEL-GQTPLIGFAGAPFTLASYLVEGGPSKHHEKTKALMTGAPDVFAALLDKL 195
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+D + +L AQ+ AG D +Q+FD+ G L ++E + R+ + + + +
Sbjct: 196 ADHTISFLTAQLAAGADAVQVFDSWVGALTLADYERHVLPHTRRVFAEIAQF--GVPGVH 253
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F G++L T + AIG DW PL A + + +QGNLDP L+ +
Sbjct: 254 FGVNTGHLLGAMAG-TGAQAIGADWRTPLPEAAKAVGPGLALQGNLDPALLLAPRAALEA 312
Query: 304 GVNAILDVL------GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+L G+ +FNLGHG+ P+ DP + +V V SE +
Sbjct: 313 ETRRVLADADAALAEGTPGHVFNLGHGVLPETDPGALTAVVDLVHSEPV 361
>gi|169603205|ref|XP_001795024.1| hypothetical protein SNOG_04611 [Phaeosphaeria nodorum SN15]
gi|160706347|gb|EAT88371.2| hypothetical protein SNOG_04611 [Phaeosphaeria nodorum SN15]
Length = 351
Score = 354 bits (908), Expect = 1e-95, Method: Composition-based stats.
Identities = 118/354 (33%), Positives = 176/354 (49%), Gaps = 31/354 (8%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL + AGRYLPEY + + K +F + C +PE LTLQPI
Sbjct: 9 KNDLILRTAK--------------AGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPI 53
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN-- 118
RY DAAI+FSDILVI A+G V V+ +GP +P+ T E ++ ++
Sbjct: 54 ERYAGLIDAAIIFSDILVIPQAMGMEVIMVDKKGPHFPEPLQTPEDKQYKEVLEREVDVA 113
Query: 119 -YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q + + Y+
Sbjct: 114 ESLDYVYKAITMTRHKLAGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQTKTWIYKYPAES 173
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK- 236
LL ++++ EYL Q+ AG +IQ+FD+ AG L F+ ++ + I + +
Sbjct: 174 KALLQKIAELCVEYLALQVQAGAQMIQVFDSWAGELSPSCFKEFSLPYLNIIADNLPARL 233
Query: 237 ----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
FAKGA Y L + T N IGLDW + A ++ K +QGN D
Sbjct: 234 KSKGLEPVPMTVFAKGAWYALHDLCE-TKYNTIGLDWLHDPAEAYKIARAKGKVLQGNAD 292
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L ++ + V ++ G G +I NLGHGITP V P ++ + +
Sbjct: 293 PGVLYGTHESITKVVENMVAGFGGGKEGWIANLGHGITPFVKPDDLKFYFEEIH 346
>gi|189183422|ref|YP_001937207.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str. Ikeda]
gi|238056491|sp|B3CR66|DCUP_ORITI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|189180193|dbj|BAG39973.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str. Ikeda]
Length = 342
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 132/340 (38%), Positives = 199/340 (58%), Gaps = 4/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
KI++ + N PIW MRQAGRYLPEY+ +RK +F ++CY P E+TLQPI R
Sbjct: 2 SKIIQAFNSSNRNYTPIWFMRQAGRYLPEYQMLRKTTNSFFELCYDPIKAAEVTLQPIAR 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
++FDAAI+FSDILV+ D+LG N+RF+ N GP + I + ++ +++
Sbjct: 62 FDFDAAIIFSDILVLPDSLGINIRFINNLGPTAEKIPNLLDLQKLKIQNTKISK---VYE 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I I+RKKL +LIGFCG PWTV +Y++ + + ++ L+
Sbjct: 119 AIDIVRKKLNKQKSLIGFCGGPWTVLTYILGYNSRNTPKFQEIKSNNKHELILDSINILT 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ ++L QI AG D++QIFD+ AG L EF Y + I+ ++ K+P+ K I F
Sbjct: 179 KHTIDHLENQILAGADIVQIFDSWAGILPYQEFSEYVIKPTSNIVKTLKEKFPHIKIIGF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG- 304
KGAG + Y + T+ + I D+++PL+ L+LQK VQGNL+P ++ + +I+
Sbjct: 239 PKGAGKLYHKYTKETNVDGISCDYNLPLNEMLKLQKNALVQGNLNPNTILSEDSKIIEES 298
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I+D L + FIFNLGHGI P+ KNV +VK V++
Sbjct: 299 VIKIMDTLSNNRFIFNLGHGILPETPIKNVELIVKLVKNY 338
>gi|303228663|ref|ZP_07315488.1| uroporphyrinogen decarboxylase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516643|gb|EFL58560.1| uroporphyrinogen decarboxylase [Veillonella atypica
ACS-134-V-Col7a]
Length = 348
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 116/343 (33%), Positives = 176/343 (51%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+++QG P+W MRQAGR YR+I++K+ F ++ PE ++T P++
Sbjct: 2 NTAYLDMIQGKNPGITPVWYMRQAGRSQAAYRKIKEKYTLF-EITKQPELCAQVTELPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
Y DAAIL+ DI+ A+G NV GP D PI E D + I
Sbjct: 61 EYGVDAAILYKDIMSPMVAIGVNVDIKPGVGPVFDTPIRRMEDIERLYAFDAT--KVEYI 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L ++ + + LIGFCGAP+T+ASY+I GG K + + R +N L++
Sbjct: 119 SKTIELLTTEVLD-VPLIGFCGAPFTIASYLIEGGPTKSYNKTRGMLISKPEIWNRLMEK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S EYL Q AG + +QIFD+ G + E+E + RIIS V+ ++PN
Sbjct: 178 LADMSIEYLSMQARAGANALQIFDSWVGAVNSTEYEQAIFPHMKRIISTVKSRFPNLPLA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + +L + I LDW L A + VQGNLDP L + +
Sbjct: 238 MNGVGTDHLISTWAKLP-LDVIALDWRSSLGAAKDRGVTQTVQGNLDPAYLYGDTKTIAK 296
Query: 304 GVNAIL-DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ IL D + G +FNLGHG+ P+ DP + L V +
Sbjct: 297 VVDEILMDGVRHGKHVFNLGHGVFPEADPAKLHWLTDYVHEKS 339
>gi|300741891|ref|ZP_07071912.1| uroporphyrinogen decarboxylase [Rothia dentocariosa M567]
gi|300381076|gb|EFJ77638.1| uroporphyrinogen decarboxylase [Rothia dentocariosa M567]
Length = 395
Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 121/342 (35%), Positives = 176/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L+ L G P+W MRQAGR LPEYR+ R+ LD C TPE E+T+QP+R
Sbjct: 56 DSPMLQALTGRASEHRPVWFMRQAGRSLPEYRKAREGIP-MLDACLTPELAAEITVQPVR 114
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DA I FSDI++ G +V V GP ++ P+ T + P +L L PI
Sbjct: 115 RHKVDAGIFFSDIVIPMKLAGVDVDIVPGRGPVLEHPVRTLDEVRALP--ELTDTALDPI 172
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ L LIGF GAP+TVA+YM+ GG +DH + R + + A+ L +
Sbjct: 173 REAVAATVDML-GSTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPVAWRELAQW 231
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ S ++L AQI AG +Q+FD+ AG LGE ++ Y +S V I
Sbjct: 232 AARTSGQFLRAQIEAGASAVQLFDSWAGSLGEADYRRYVQEHSAAALSMVEEF--GVPRI 289
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L ++ IG+D+ +PL A L P+QGN+DP L G + +
Sbjct: 290 HFGTGTADLLPAMHE-AGADVIGVDYRLPLDEANRRLNGAVPLQGNIDPALLAAGRETLY 348
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ +L S P I NLGHG+ P DP+ + DLV +
Sbjct: 349 AHVDEVLAAGASAPAHIVNLGHGVPPTTDPQVLTDLVTYLHE 390
>gi|258651776|ref|YP_003200932.1| uroporphyrinogen decarboxylase [Nakamurella multipartita DSM 44233]
gi|258555001|gb|ACV77943.1| uroporphyrinogen decarboxylase [Nakamurella multipartita DSM 44233]
Length = 372
Score = 353 bits (906), Expect = 2e-95, Method: Composition-based stats.
Identities = 115/340 (33%), Positives = 173/340 (50%), Gaps = 10/340 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+L +G P+W MRQAGR LPEYR++R+ L+ C PE E+TLQP+RR+
Sbjct: 37 PLLAAYRGTRPAHRPVWFMRQAGRSLPEYREVRRGIG-MLESCLMPELAAEITLQPVRRH 95
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDI+V G +V+ V GP + PI T P +D +
Sbjct: 96 GVDAAILFSDIVVPLKLAGIDVQIVAGTGPVVAAPIRTAADVAALPTLDPDALAPVAAE- 154
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ LIGF GAP+T+ASY++ GG +DH + + + ++ LL +++
Sbjct: 155 --AAGVVAELGSTPLIGFAGAPFTLASYLVEGGPSRDHRLTKTLMHAEPQVWHALLTWVA 212
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V+ +L AQI AG +Q+FD+ AG L ++E + A + +AV + F
Sbjct: 213 GVTGAFLRAQILAGASAVQVFDSWAGALSRPDYERFVAPHSAAVFAAVADL--PVPRVHF 270
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDG 304
G G +L R + ++ +G+D +PL A L PVQGN+DP L G Q +
Sbjct: 271 GVGTGELLTAMRDV-GADVVGIDHRIPLDEASDRLGGATPVQGNIDPALLFAGRQALHAH 329
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ + P + NLGHG+ P DP + +LV+ V S
Sbjct: 330 AEDVIRRGRAAPGHVVNLGHGVPPDTDPDVLTELVEFVHS 369
>gi|171855200|sp|A0JYN1|DCUP_ARTS2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|116611427|gb|ABK04151.1| uroporphyrinogen decarboxylase [Arthrobacter sp. FB24]
Length = 345
Score = 352 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 172/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +G P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+R
Sbjct: 7 DSPLITAYRGGKPTRRPVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELASEITLQPVR 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAI FSDI++ G V V GP +D P+ T E P L L PI
Sbjct: 66 RHDVDAAIFFSDIVIPLKLAGVGVDIVPGVGPVLDKPVRTAEDVAALP--QLTWEALEPI 123
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L LIGF GAP+T+A+YM+ G +DH R + + +N L ++
Sbjct: 124 REAVRLTVAQL-GKTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANW 182
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D S +L AQ+ AG Q+FD+ AG LG +++ + A + R + VR + A I
Sbjct: 183 AADASGMFLRAQLEAGASAGQLFDSWAGSLGLADYKRFVAPASARALDHVR--HLGAPLI 240
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L R + + +PL A L P+QGN+DP L V+
Sbjct: 241 HFGTGTSELLVAMRDVGVDVVGVD-YRLPLDEANRRLGGTVPLQGNIDPALLSAPWAVLE 299
Query: 303 DGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ + + NLGHG+ P+ DP + +V+ + S
Sbjct: 300 AHVREVIKAGSFAPGHVLNLGHGVPPETDPDVLTRVVELIHS 341
>gi|296394324|ref|YP_003659208.1| uroporphyrinogen decarboxylase [Segniliparus rotundus DSM 44985]
gi|296181471|gb|ADG98377.1| uroporphyrinogen decarboxylase [Segniliparus rotundus DSM 44985]
Length = 362
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 114/347 (32%), Positives = 165/347 (47%), Gaps = 15/347 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L L G + P+W MRQAGR LPEYR +R ++ L+ C PE E+TLQP+R
Sbjct: 18 DSPFLVALAGKRPSRRPVWFMRQAGRSLPEYRALRAG-RDMLETCLDPELVCEITLQPLR 76
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAILFSDI+V G V GP +D P+ +Q P L P+
Sbjct: 77 RHGVDAAILFSDIVVPLKTAGVGVTIKPGVGPVLDAPVGSQADVDALPPAST--EGLEPV 134
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ H LIGF GAP+T+ASY++ GG K+H + + F LL
Sbjct: 135 AKA-VKALVAALGHTPLIGFAGAPFTLASYLVEGGPSKNHAKTKALMTGAPDVFAALLSK 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D++ +L Q+ AGVD +Q+FD+ AG L ++E + R+ + + I
Sbjct: 194 LADLTVSFLRVQLAAGVDAVQVFDSWAGALSLADYERHVLPHTRRVFAEIADF--GVPGI 251
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMI 302
F G++L + IG+DW PL A + +QGNLDP L+ +
Sbjct: 252 HFGVNTGHLLGA-TAGCGARVIGVDWRTPLVDAARAVGSGLVLQGNLDPALLLAPRPALE 310
Query: 303 DGVNAI------LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G+ IFNLGHG+ P+ DP + +V V
Sbjct: 311 AQTRRVLADADAALAAGAAGHIFNLGHGVLPETDPDALTAVVDIVHE 357
>gi|170750688|ref|YP_001756948.1| uroporphyrinogen decarboxylase [Methylobacterium radiotolerans JCM
2831]
gi|170657210|gb|ACB26265.1| uroporphyrinogen decarboxylase [Methylobacterium radiotolerans JCM
2831]
Length = 392
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 155/375 (41%), Positives = 219/375 (58%), Gaps = 34/375 (9%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++K+L VL+G I PPP W+MRQAGRYLPEYR R + +FLD+CY+P++ VE+TLQ
Sbjct: 19 TTSERKVLRVLEGEAIGPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYSPDFAVEVTLQ 78
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNI--DLFLNY 119
PIRR+ FDAAILFSDILV+ ALG++VRFVE EGPR+DP+ + + +++
Sbjct: 79 PIRRFGFDAAILFSDILVVPHALGQDVRFVEGEGPRLDPLDGRAAFARLREAGDPAVMSH 138
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L P+F++++ LR +LP TL+GFCGAPWTVASYMI G D R A ++ +
Sbjct: 139 LAPVFETVTRLRAELPGETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAEGDTALVDT 198
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG------------------------- 214
L+D L V EYL+ Q+ AG D +QIF++HAG L
Sbjct: 199 LIDRLVAVQTEYLVRQLEAGADAVQIFESHAGTLPLAVLAPGGTVEPVGDVAESALPGAA 258
Query: 215 -EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWS 270
++ R + R+++ VR + P AK I FA+G+G L + R T ++A+G+DW
Sbjct: 259 AADALTRWSLRPIARMVAGVRARVPGAKIIVFARGSG--LDGHARVVPETGADAVGVDWG 316
Query: 271 VPLSFALELQKEGPV-QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQV 329
V L + V QGNL P L+ G + V+A+L+ P IFNLGHGITPQ
Sbjct: 317 VDLKALRQTVPAATVTQGNLHPETLIAGGAALDAAVDAVLEATAGLPHIFNLGHGITPQT 376
Query: 330 DPKNVLDLVKTVRSE 344
+V ++ +R +
Sbjct: 377 PVAHVERMLARLRGQ 391
>gi|254420353|ref|ZP_05034077.1| uroporphyrinogen decarboxylase [Brevundimonas sp. BAL3]
gi|196186530|gb|EDX81506.1| uroporphyrinogen decarboxylase [Brevundimonas sp. BAL3]
Length = 352
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 124/343 (36%), Positives = 194/343 (56%), Gaps = 8/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ L+G ++ PP+W MRQAGRYLPEYR++R + +F+ C PE E TLQP+
Sbjct: 10 QTPLMIRALRGETLDRPPVWFMRQAGRYLPEYRRLRAEAPDFIAFCLNPEMAAEATLQPM 69
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ FDAAI+F+DIL+I ALG++V F EGPR+ + + L P+ +L
Sbjct: 70 RRFGFDAAIVFADILLIPRALGQDVWFETGEGPRLGEMPIPGRMAELAPDAGA---HLSA 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG----FIKDHGQNRVFAYQNSRAFN 178
+ +++SI+RK L LIGF GAPWTVA+YM+ G + Q R +AY + R +
Sbjct: 127 VGETLSIVRKALEPERALIGFAGAPWTVATYMLDGEHRTIGKGERAQARTYAYADPRRVD 186
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ L + +A YL Q AG V++IF++ A L + FE + ++ R
Sbjct: 187 ETLEVLVEATARYLKMQADAGAQVLKIFESWAEGLPDDLFERLVLKPHQALVRRTRELGV 246
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F +G+ + + Y + +A+ LD + PL +Q+ P+QG LDP+ L G
Sbjct: 247 TVPLIGFPRGSAALAERYAEEVEVDAVALDTACPLEVGKRVQQIKPIQGALDPLLLRAGG 306
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + V+ +++ G GP++FNLGHGI P V +V ++K +
Sbjct: 307 ERLDRRVDQLMEAWGQGPWVFNLGHGILPDVPIDHVERVLKRI 349
>gi|182414510|ref|YP_001819576.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
gi|177841724|gb|ACB75976.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
Length = 342
Score = 352 bits (904), Expect = 4e-95, Method: Composition-based stats.
Identities = 127/349 (36%), Positives = 196/349 (56%), Gaps = 11/349 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN R ++ L ++ PP+W+MRQAGRYLPEYR ++ + +FL+M TP E+TL
Sbjct: 1 MNSR-ERFLAACACQPLDRPPLWIMRQAGRYLPEYRALKAR-SSFLEMVRTPSLAAEVTL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLN 118
QP+ R+ DAAILFSDILVI +ALG+ RF + G M+ T +I L P +
Sbjct: 59 QPLHRFALDAAILFSDILVIPEALGQGYRFRDEGGIAMEFRLENTAQIDALAP-ANAVPE 117
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++++L+K+L + L+GF G+PWT+A+YM+ GG ++ + + Y + F+
Sbjct: 118 RLRYVADTLALLKKELAGNKALLGFGGSPWTLATYMVEGGSSEEFERIKQLFYTDRPTFD 177
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ L+ Y QI AGVD IQIFD+ G + ++E + + + RI++A+ R
Sbjct: 178 QLLEKLTAALIAYFRMQIAAGVDAIQIFDSWGGIIAGPDYEAASLQWIRRIVTALPR--- 234
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
+ I +AKG L + + + + +DW+ L+ L VQGNLDP+ L
Sbjct: 235 DFPIILYAKGTAPQLMD-QAFCGARVLSVDWTNDLAIVRRTLPGNVAVQGNLDPVLLNTT 293
Query: 298 NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ +L+ + G+ IFNLGHGI PQ + V LV TV + K
Sbjct: 294 PAIVQRETARLLESMRGTAGHIFNLGHGILPQARLECVEALVTTVTTWK 342
>gi|220913239|ref|YP_002488548.1| uroporphyrinogen decarboxylase [Arthrobacter chlorophenolicus A6]
gi|219860117|gb|ACL40459.1| uroporphyrinogen decarboxylase [Arthrobacter chlorophenolicus A6]
Length = 381
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 113/342 (33%), Positives = 172/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +G + P+W MRQAGR LPEY ++R+ LD C PE E+TLQP+R
Sbjct: 43 DSPLITAYRGGKPSRRPVWFMRQAGRSLPEYLKVREGIA-MLDSCLRPELASEITLQPVR 101
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DA I FSDI++ G V V GP +D P+ T P L L PI
Sbjct: 102 RHDVDAGIFFSDIVIPLKLAGVGVDIVPGVGPVLDKPVRTAVDVAALPK--LTWEALEPI 159
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L LIGF GAP+T+A+YM+ G +DH R + + +N L ++
Sbjct: 160 REAVRLTVAEL-GKTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWNALANW 218
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D S +L AQ+ AG Q+FD+ AG LG +++ + A + R + VR + A I
Sbjct: 219 AADASGLFLRAQLEAGASAGQLFDSWAGSLGLADYQRFVASASSRALDHVR--HLGAPLI 276
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L R + + +PL A L P+QGN+DP L V+
Sbjct: 277 HFGTGTSELLVAMRDVGVDVVGVD-YRLPLDEANRRLGGSVPLQGNIDPALLSAPWDVLE 335
Query: 303 DGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ G+ + NLGHG+ P+ DP + +VK + S
Sbjct: 336 AHVREVIAAGAGAPGHVLNLGHGVPPETDPDVLTRVVKLIHS 377
>gi|220916322|ref|YP_002491626.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954176|gb|ACL64560.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 350
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-------DPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + +
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIGNPVRTRADVDALR-VPVPKK 124
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y +
Sbjct: 125 DLPYVLDGVRAIRAALADRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPATAH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR+
Sbjct: 184 ALFEKLTQAAIVQIEEQVAAGAHAAQIFESWLGELAREDLEEFSFPYLARIAEAVRKT-- 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A VQGN D L+
Sbjct: 242 GVPSILFSTGTTAHLEPMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLLLGPR 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V + +L G P +IFNLGHGI +NV +V V +
Sbjct: 301 DVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAVHAF 347
>gi|197121558|ref|YP_002133509.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. K]
gi|196171407|gb|ACG72380.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. K]
Length = 350
Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGP-------RMDPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E +P+ T+ + +
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALR-VPVPKK 124
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y +
Sbjct: 125 DLPYVLDGVRAIRAALADRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPATAH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR+
Sbjct: 184 ALFEKLTQAAIVQIEEQVAAGAHAAQIFESWLGELAREDLEEFSFPYLARIAEAVRKT-- 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A VQGN D L+
Sbjct: 242 GVPSILFSTGTTAHLEPMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLLLGPR 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V + +L G P +IFNLGHGI +NV +V V +
Sbjct: 301 DVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAVHAF 347
>gi|120403471|ref|YP_953300.1| uroporphyrinogen decarboxylase [Mycobacterium vanbaalenii PYR-1]
gi|166234261|sp|A1T7Z4|DCUP_MYCVP RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|119956289|gb|ABM13294.1| uroporphyrinogen decarboxylase [Mycobacterium vanbaalenii PYR-1]
Length = 354
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 114/360 (31%), Positives = 181/360 (50%), Gaps = 24/360 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L + G P+W+MRQAGR LPEYR +R K + C+ +
Sbjct: 1 MNTRRELPESPYLAAVAGRKPLRVPVWMMRQAGRSLPEYRALRAK-NTMMQACFDADLIT 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V A G ++ V + GP + P+ T + ++
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAQPVRTADDVAAIRPLE- 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + P+ +I L +L + LIGF GAP+T+ASY++ GG ++H + + +
Sbjct: 119 -PSRVDPVATAIGRLVGEL-GDVPLIGFAGAPFTLASYLVEGGPSRNHERTKAMMLGETA 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L+ L+D++ +L AQ+ AGVD IQ+FD+ AG L ++ Y R+ +++
Sbjct: 177 TWHALMTALTDITIAFLRAQVDAGVDAIQVFDSWAGTLSLADYRTYVLPHSARVFASLAG 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPL-SFALELQKEGPVQGNLD 290
F G +L + +G+DW L A ++ +QGNLD
Sbjct: 237 A--GVPMTHFGVGTAELLGAMSEAVTGHGVPAMVGVDWRTSLTDAAARVRPGTALQGNLD 294
Query: 291 PMRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
P+ L+ G V+ V +D G+ +FNLGHG+ P DP + D V V
Sbjct: 295 PVVLLAGWPVVERAVRAVVEDGRRAVDA-GAVGHVFNLGHGVLPATDPAVITDTVALVHE 353
>gi|219120415|ref|XP_002180946.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217407662|gb|EEC47598.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 431
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 113/348 (32%), Positives = 171/348 (49%), Gaps = 9/348 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ +G + P+W+MRQAGRY+ +R+ F + TP+Y VEL+LQ R
Sbjct: 83 RDILVRAARGETVERTPVWMMRQAGRYMEAFREYSDVLP-FRERSETPDYAVELSLQCHR 141
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
Y D I+FSDIL LG + V+ GP + E + N F + + I
Sbjct: 142 AYGMDGIIMFSDILTPLPTLGIDFDVVKGTGPVITTKVRTEEDVNNMPRHEFDDKVPFIK 201
Query: 125 QSISILRKK-LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW---- 179
+ ++ L ++ + +LIGF GAP+T+A+Y I G KD + + R N
Sbjct: 202 EILNRLSQEAEDANTSLIGFVGAPFTLAAYTIEGKSSKDCLTTKKLLMADERGDNACISL 261
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LD L+D+ +Y QI G VIQ+F++ A L H FE YA + + I ++ +YP+
Sbjct: 262 FLDKLADMIGDYACYQIEHGAQVIQVFESWAHQLSPHWFETYAKPAAQKAIRKIKSQYPD 321
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGN 298
I FA G L+ +R ++ I +DW+V LS A L + PV GNLDP L
Sbjct: 322 TPVIYFANGGSSYLE-LQRDMGADMIAVDWAVNLSQARTILGPDVPVSGNLDPTVLFGSK 380
Query: 299 QVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +D G G + NLGHG+ + V LV V+ K
Sbjct: 381 EQIEQAVRDCIDQAGGPGRHLLNLGHGVMQGTPEEAVKWLVDEVKRYK 428
>gi|152965551|ref|YP_001361335.1| uroporphyrinogen decarboxylase [Kineococcus radiotolerans SRS30216]
gi|151360068|gb|ABS03071.1| uroporphyrinogen decarboxylase [Kineococcus radiotolerans SRS30216]
Length = 354
Score = 350 bits (899), Expect = 1e-94, Method: Composition-based stats.
Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 18/358 (5%)
Query: 1 MNERKQKILEVLQGNVINP-PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M L +G P+W MRQAGR LPEYR+ R L+ C PE E+T
Sbjct: 1 MPLENSAYLHAARGGTTPRRTPVWFMRQAGRSLPEYREARAGT-TMLESCRIPELVAEIT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY+ DAA+ +SDI+V +A G V V GP + +P T+ P +L L+
Sbjct: 60 LQPVRRYDVDAAVFYSDIVVPLEAAGVGVEIVAGTGPVIAEPFRTRADLDRLP--ELSLD 117
Query: 119 YLLPIFQSISILRKKL---PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L + ++++ +L + + LIGF GAP+T+ASY++ GG +D + + + + +
Sbjct: 118 ALQHVTDAVALTTAQLAGIGDGVPLIGFAGAPFTLASYLVEGGPSRDLLRTKALMHADPQ 177
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
++ L L+ ++ +L AQ+ AG +Q+FD+ G L ++E A ++AV
Sbjct: 178 LWHDLAARLAQIAGTFLRAQVLAGASAVQLFDSWVGALPLADYERLVAPHSSAALAAVSD 237
Query: 236 KYPNAKFISFAKGAGYMLKNYRRL-TDSNAIGLDWSVPLSF-----ALELQKEGPVQGNL 289
F G G +L + + +G+D+ VPL A + VQGNL
Sbjct: 238 L--GVPRTHFGTGTGELLGAMAAVDGGVDVLGVDFRVPLDVGAARGAAGAGRPVAVQGNL 295
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
DP L V+ ++ IL G + NLGHG+ P DP + +V+ V + +
Sbjct: 296 DPALLFAPWDVLRADLHRILAEGERAGGGHVVNLGHGVPPTADPAVLARVVEEVHAWR 353
>gi|325963983|ref|YP_004241889.1| uroporphyrinogen decarboxylase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323470070|gb|ADX73755.1| uroporphyrinogen decarboxylase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 364
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 112/342 (32%), Positives = 173/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +G + P+W MRQAGR LPEY ++RK LD C PE E+TLQP+R
Sbjct: 26 DSPLITAYRGGKPSRRPVWFMRQAGRSLPEYLEVRKGVA-MLDSCLRPELASEITLQPVR 84
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R++ DA I FSDI++ G V V GP +D P+ T P L L PI
Sbjct: 85 RHDVDAGIFFSDIVIPLKLAGVGVDIVPGVGPVLDTPVRTAADVAALP--QLTWESLEPI 142
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L + LIGF GAP+T+A+YM+ G +DH R + + ++ L ++
Sbjct: 143 REAVRLTVAEL-GNTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWSALANW 201
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+D S +L AQ+ AG Q+FD+ AG LG ++ Y A + R + VR + A I
Sbjct: 202 AADASGMFLQAQLEAGASAAQLFDSWAGSLGLADYTKYVAPASTRALDHVR--HLGAPLI 259
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L R + + +PL A L P+QGN+DP L +++
Sbjct: 260 HFGTGTSELLVAMRDVGVDVVGVD-YRLPLDEANRRLGGTVPLQGNIDPALLPAPWEILE 318
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ + P + NLGHG+ P+ DP + +V+ + S
Sbjct: 319 AHVREVIAAGAAAPGHVVNLGHGVPPETDPAVLTRVVELIHS 360
>gi|225020281|ref|ZP_03709473.1| hypothetical protein CORMATOL_00284 [Corynebacterium matruchotii
ATCC 33806]
gi|224947025|gb|EEG28234.1| hypothetical protein CORMATOL_00284 [Corynebacterium matruchotii
ATCC 33806]
Length = 330
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 116/331 (35%), Positives = 166/331 (50%), Gaps = 19/331 (5%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYRQ+R + LD C+ PE E+TLQP+RR++ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRQVRAGI-DMLDSCFMPELLAEITLQPVRRHDVDAAILFSDIVVPLKAA 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G +V V GP + PI + P +D ++ + I I+ L + LIGF
Sbjct: 60 GVDVEIVSGRGPVVAQPILSMSDVDKLPILDSDID---GVMAGIGIIIDNLTSSQALIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG ++H + + + ++ L+ L+ +L QI AG+D +
Sbjct: 117 AGAPFTLASYLVEGGPSRNHEKTKAMMHAQPETWHALMRKLTPTITHFLSMQISAGIDAM 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ AG L E ++ Y I +A+ + I F G G +L + ++
Sbjct: 177 QLFDSWAGFLTERDYREYVLPYSTEIFAAIAGA--DIPRIHFGVGTGELLGAMSQ-AGAD 233
Query: 264 AIGLDWSVPLSFALEL----QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG---- 315
G+DW VPL A VQGNLDP L G +V+ V I
Sbjct: 234 VTGVDWRVPLDVAARRIHHAVGPKSVQGNLDPALLCAGEEVVRAEVTRICAEADRAISAG 293
Query: 316 ---PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHG+ P DP+ + V V
Sbjct: 294 HAIGHIFNLGHGVLPTTDPEMITRAVSLVHE 324
>gi|197106995|ref|YP_002132372.1| uroporphyrinogen decarboxylase [Phenylobacterium zucineum HLK1]
gi|254767701|sp|B4RD11|DCUP_PHEZH RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|196480415|gb|ACG79943.1| uroporphyrinogen decarboxylase [Phenylobacterium zucineum HLK1]
Length = 345
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 124/347 (35%), Positives = 181/347 (52%), Gaps = 4/347 (1%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+ K+L L G + PPIW MRQAGR LPEYR++R + K+F+ C PE E TL
Sbjct: 1 MSTPPPKLLRALAGETLERPPIWFMRQAGRSLPEYRELRSRAKDFIAFCLDPEMAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RR+ D AI+F+DIL+I ALG++V F EGP++ + I L ++ L
Sbjct: 61 QPMRRFPMDGAIVFADILLIPLALGQDVWFEAGEGPKLGELPP--IEALRDQVEASTGRL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ +R +L LIGF GAPWTVA+YM+ + AY + + L
Sbjct: 119 SAVGETLARVRAELEPDRALIGFAGAPWTVATYMLERKGSEREAARAY-AYAHPDELDAL 177
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD L D +A YL+ Q AG +++F++ A L E FE R I+ VR
Sbjct: 178 LDVLVDATARYLVMQAKAGAQALKLFESWAESLSEDVFERIVVRPHAAIVEKVRAAGVTV 237
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQ 299
I F +GAG ++ Y I LD + LQ +G +QG LD + L G
Sbjct: 238 PIIGFPRGAGAQVETYAEGVPVEGIALDVQATAALGRRLQAQGRCIQGALDNLLLREGGP 297
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ V+ +L G GP+IFNLGHG+ P +N+ +V V + +
Sbjct: 298 ALDARVDQLLAQWGDGPWIFNLGHGVLPDTPIENIARVVSRVTGKPV 344
>gi|218529747|ref|YP_002420563.1| uroporphyrinogen decarboxylase [Methylobacterium chloromethanicum
CM4]
gi|218522050|gb|ACK82635.1| uroporphyrinogen decarboxylase [Methylobacterium chloromethanicum
CM4]
Length = 360
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 157/351 (44%), Positives = 214/351 (60%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + Q L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPTLLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE----HEFENYAARSVGRIISAVRRKYP 238
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R++ VR + P
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPESSDGDALKRYSLGPITRMVQGVRAQVP 251
Query: 239 NAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRL 294
+AK I FAKG+G L+ + R T ++A+G+DW V L+ V QGNL P L
Sbjct: 252 DAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTVTQGNLHPETL 309
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G + + V+AIL P IFNLGHGITPQ +V ++ +R +
Sbjct: 310 IEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGGR 360
>gi|322436926|ref|YP_004219138.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX9]
gi|321164653|gb|ADW70358.1| uroporphyrinogen decarboxylase [Acidobacterium sp. MP5ACTX9]
Length = 393
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 108/388 (27%), Positives = 177/388 (45%), Gaps = 49/388 (12%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + + ++ P+W +RQAGRY+PEY +R K L++C TPE E+T+
Sbjct: 8 QNSSRFVRACLRQPVDRTPVWFLRQAGRYMPEYMAVR-KHHTLLEICRTPEIAAEVTITA 66
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYL 120
R DAAI+F+D+L+ +G + FV EGP ++ PI T E + L + L Y+
Sbjct: 67 AERLGVDAAIIFADLLLPFTPMGLDFEFVAGEGPVVNTPIRTYEQVQALRTDRSEDLIYV 126
Query: 121 LPIFQSIS---------ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+ ++ + + + +IGFCGAP+T+ASYMI GG +++ + + Y
Sbjct: 127 SQSIEKVAKHFASPRPPEAGQTDGDQLGIIGFCGAPFTLASYMIEGGSSRNYIEAKKMMY 186
Query: 172 -----------------------QNSR---------AFNWLLDFLSDVSAEYLIAQIHAG 199
+ A+ L++ L V + Q+ AG
Sbjct: 187 ASGATTESRHSERSSEPPYLHSSTEPQSPMETTGSAAWPLLMEKLVTVLTAFAAQQVEAG 246
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
DVIQ+FD+ AG L ++ + +++ +R I F +L
Sbjct: 247 ADVIQVFDSWAGALSVEDYRQFCLAPTKQLVENIRNM--GVPAIYFGVDTASLLPTMTE- 303
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-F 317
T ++ +GLDW +PL + + +QGNLDP+ L +V+ V IL + P
Sbjct: 304 TGADVLGLDWRIPLDEGWKSVGTAHAIQGNLDPIALFAPQEVLHARVKTILQQAANRPGH 363
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IFNLGHGI P +NV+ + + V
Sbjct: 364 IFNLGHGIVPGTPVENVIQVARWVHELS 391
>gi|167648971|ref|YP_001686634.1| uroporphyrinogen decarboxylase [Caulobacter sp. K31]
gi|167351401|gb|ABZ74136.1| uroporphyrinogen decarboxylase [Caulobacter sp. K31]
Length = 346
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 129/340 (37%), Positives = 185/340 (54%), Gaps = 3/340 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ K+L VL G PP+W MRQAGRYLPEYR +R F+D C PE E+TLQP+R
Sbjct: 10 QPKLLSVLDGTSAKRPPVWFMRQAGRYLPEYRAVRATEPTFIDFCLNPEKAAEVTLQPMR 69
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ +DAAI+F+DIL+I ALG+ V F EGP++ + + I + L +
Sbjct: 70 RFPYDAAIVFADILLIPQALGQKVWFEAGEGPKLGELPS--IESMRELTGQAGQALGAVG 127
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++S +R L LIGF GAPWTVA+YMI GG D R FAYQ S + L+ L
Sbjct: 128 ETLSRVRSVLEPERALIGFAGAPWTVATYMIEGGSS-DRSGARTFAYQQSDKLDALIQVL 186
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
D + +YL Q +G V+++F++ A L E FE + I+ +R K I
Sbjct: 187 VDATIDYLAMQAASGAQVLKLFESWAEGLSEPLFERLVTKPHTAIVEGLRAKGVTTPIIG 246
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
F +GAG +++ Y R + LD + +QK +QG LDP+ L G ++
Sbjct: 247 FPRGAGTLVEAYARTAPVQGVALDTQASAALGQAIQKTKAIQGALDPLLLRAGGDALLTR 306
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V+ +L+ G GP+IFNLGHGI P +V ++ V +
Sbjct: 307 VDQLLEQWGHGPYIFNLGHGILPDTPIAHVESVLARVTGK 346
>gi|188580750|ref|YP_001924195.1| uroporphyrinogen decarboxylase [Methylobacterium populi BJ001]
gi|179344248|gb|ACB79660.1| uroporphyrinogen decarboxylase [Methylobacterium populi BJ001]
Length = 361
Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 212/358 (59%), Gaps = 15/358 (4%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M E K + +L V+ G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E
Sbjct: 6 MAEAKTADRPVLRVMSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATE 65
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDL 115
+TLQPIRR+ F+A+ILFSDILV+ ALG++VRFVE EGPR+D + Q L
Sbjct: 66 VTLQPIRRFGFEASILFSDILVVPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPA 125
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++L P+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A +
Sbjct: 126 IFSHLAPVFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTPDLAPARALAASDPA 185
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE----HEFENYAARSVGRIIS 231
+ LLD L V EYL+ Q+ AG D +QIF++HAG L + + ++ + R++
Sbjct: 186 LLDALLDRLVTVQIEYLVRQLRAGADAVQIFESHAGVLPDSADGDALKRFSLGPIARMVG 245
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFALELQKEGPV-QG 287
+R + P AK I FA+G+G L + R T ++ +G+DW V L+ V QG
Sbjct: 246 GIRAEVPGAKIIVFARGSG--LDGHARVIPETGADVVGVDWGVDLAALRGRVPATTVTQG 303
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
NL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R +
Sbjct: 304 NLHPETLIEGGRALDAAVDAILAATEGQPHIFNLGHGITPQTPIAHVEQMLARLRGGR 361
>gi|227505113|ref|ZP_03935162.1| uroporphyrinogen decarboxylase [Corynebacterium striatum ATCC 6940]
gi|227198316|gb|EEI78364.1| uroporphyrinogen decarboxylase [Corynebacterium striatum ATCC 6940]
Length = 321
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 112/328 (34%), Positives = 168/328 (51%), Gaps = 16/328 (4%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR++R+ + LD C+ PE E+TLQP+RR++ D AILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRKVREGI-DMLDSCFMPELLAEITLQPVRRHDVDGAILFSDIVVPLKAA 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V GP MD PI T++ P +D + + + I I+ +L LIGF
Sbjct: 60 GVGVNIVPGRGPVMDAPIRTRQDVENLPILDQD---VPEVREGIRIILDELNPQQALIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG K+H + + + ++ L+ L+ +L Q+ AG+D +
Sbjct: 117 VGAPFTLASYLVEGGPSKNHEKTKALMHAEPETWHVLMKRLTPTIISFLELQMEAGIDAM 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ AG L E ++ + RI++A + I F G G +L S
Sbjct: 177 QLFDSWAGYLNERDYREFVLPYSTRILAAAEGR---VPRIHFGVGTGELLGAMSE-AGSE 232
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-------P 316
+G+D+ V + A + +QGNLDP L G+ + V I D + +
Sbjct: 233 VMGVDYRVSMDAAAKRVSARTLQGNLDPALLFAGDDAIRGAVRTIKDEVAAAQAAGDIDT 292
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
I+N GHG+ P D V V + E
Sbjct: 293 HIWNSGHGVLPTTDADAVTRAVAIIHEE 320
>gi|119961786|ref|YP_948467.1| uroporphyrinogen decarboxylase [Arthrobacter aurescens TC1]
gi|119948645|gb|ABM07556.1| uroporphyrinogen decarboxylase [Arthrobacter aurescens TC1]
Length = 371
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 170/344 (49%), Gaps = 10/344 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ +G + P+W MRQAGR LPEY ++R+ LD C PE E+TLQP
Sbjct: 31 TSDSPLITAYRGGTPSRRPVWFMRQAGRSLPEYLKVREGVA-MLDSCLRPELAAEITLQP 89
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR++ DAAI FSDI++ G V V GP +D P+ T P L L
Sbjct: 90 VRRHDVDAAIFFSDIVIPLKLAGVGVDIVPGVGPVLDKPVRTAADVAALPT--LTWEALE 147
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI +++ + +L LIGF GAP+T+A+YM+ G +DH R + + + L
Sbjct: 148 PIREAVRLTVAEL-GKTPLIGFAGAPFTLAAYMVEGKPSRDHLGPRTMMHADPETWAALA 206
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
++ +D S +L AQ+ AG Q+FD+ AG LG ++ Y A + R + VR A
Sbjct: 207 NWAADTSGMFLQAQLEAGASAAQLFDSWAGSLGLADYTKYVAPASTRALDHVRGL--GAP 264
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQV 300
I F G +L R + + +PL A L P+QGN+DP L +V
Sbjct: 265 LIHFGTGTSELLVAMRDVGVDVVGVD-YRLPLDEANRRLGGTVPLQGNIDPALLSAPWEV 323
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ V ++ P + NLGHG+ P+ DP + +V+ + S
Sbjct: 324 LEAHVREVIAAGSHAPGHVLNLGHGVPPETDPTVLTRVVELIHS 367
>gi|311111785|ref|YP_003983007.1| uroporphyrinogen decarboxylase [Rothia dentocariosa ATCC 17931]
gi|310943279|gb|ADP39573.1| uroporphyrinogen decarboxylase [Rothia dentocariosa ATCC 17931]
Length = 395
Score = 349 bits (895), Expect = 4e-94, Method: Composition-based stats.
Identities = 120/342 (35%), Positives = 175/342 (51%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L+ L G P+W MRQAGR LPEYR+ R+ LD C TPE E+T+QP+R
Sbjct: 56 DSPMLQALTGRASEHRPVWFMRQAGRSLPEYRKAREGIP-MLDACLTPELAAEITVQPVR 114
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
R+ DA I FSDI++ G NV V GP ++ P+ T + P +L L PI
Sbjct: 115 RHKVDAGIFFSDIVIPMKLAGVNVDIVPGRGPVLEHPVRTLDEVRALP--ELTDAALDPI 172
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+S++ + L LIGF GAP+TVA+YM+ GG +DH + R + + A+ L +
Sbjct: 173 RESVAATVEML-GSTPLIGFAGAPFTVAAYMVEGGPSRDHLRPRTMMHADPVAWRELAQW 231
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ + ++L AQI AG +Q+FD+ AG LGE ++ Y + V I
Sbjct: 232 AARTAGQFLRAQIEAGASAVQLFDSWAGSLGEADYRRYVQEHSAAALGMVEEF--GVPRI 289
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMI 302
F G +L ++ IG+D+ +PL A L P+QGN+DP L G + +
Sbjct: 290 HFGTGTAELLPAMHE-AGADVIGVDYRLPLDEANRRLNGAVPLQGNIDPALLAAGRETLY 348
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ +L S P I NLGHG+ P DP+ + DLV +
Sbjct: 349 AHADEVLAAGASAPAHIVNLGHGVPPTTDPQVLTDLVTYLHE 390
>gi|50954007|ref|YP_061295.1| uroporphyrinogen decarboxylase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|71648663|sp|Q6AHF5|DCUP_LEIXX RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|50950489|gb|AAT88190.1| uroporphyrinogen decarboxylase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 377
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 115/360 (31%), Positives = 174/360 (48%), Gaps = 23/360 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+++ QG P+W MRQAGR LPEYR +R + LD+C P E+TLQP+RR
Sbjct: 20 SRLVRSYQGERQEVTPVWFMRQAGRSLPEYRDLRVGTR-MLDVCLDPAMASEITLQPVRR 78
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNID---LFLNYLL 121
+ DA I FSDI+V G V +GP + + T +D L +
Sbjct: 79 HGVDAGIFFSDIVVPLKLAGVEVEIQPGKGPVFERAVRTSADVDRLSAVDPAALAADTFA 138
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +++ + +L N LIGF GAP+T+A+Y++ GG KDH + R + A+ L+
Sbjct: 139 AVQEAVRLTTAEL-NETPLIGFAGAPFTLAAYLVEGGPSKDHLRARTLMHAAPGAWARLM 197
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR------- 234
D+ +D+S +L AQ+ AG Q+FD+ AG L ++ +AA + R S VR
Sbjct: 198 DWTADLSGAFLRAQVLAGASAAQLFDSWAGSLSLRDYAEHAAPASARAFSHVRDLTYTVP 257
Query: 235 -------RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQ 286
+ F G G +L ++AIG+D L A L P+Q
Sbjct: 258 SADPDGEAVVRAVPIVHFGVGTGELLPAMHE-AGADAIGVDHRTLLDEASRRLGHIVPLQ 316
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GN DP L +V+ +LD + P +FNLGHG+ P+ DP + +V+ V +
Sbjct: 317 GNADPAMLAAPWEVLSGHALDVLDRGRAAPAHVFNLGHGVPPETDPAVLTRVVELVHGWR 376
>gi|269958018|ref|YP_003327807.1| uroporphyrinogen decarboxylase [Xylanimonas cellulosilytica DSM
15894]
gi|269306699|gb|ACZ32249.1| uroporphyrinogen decarboxylase [Xylanimonas cellulosilytica DSM
15894]
Length = 378
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 176/349 (50%), Gaps = 12/349 (3%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ L+G+ P+W MRQAGR LPEYR++R+ LD C P E+TLQP
Sbjct: 33 TTASPLVRALRGDRPERLPVWFMRQAGRSLPEYREVRRGHA-MLDSCLNPPLATEITLQP 91
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RR+ DAAI FSDI+V G V V GP MD P T + L L
Sbjct: 92 VRRHGVDAAIFFSDIVVPLRLAGVAVDIVPGVGPVMDQPYRTPSDVDRLVSTALDDEALA 151
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
PI +++++ +L LIGF GAP+T+A+Y++ G +DH R + + + ++ L+
Sbjct: 152 PIREAVALTVAQLGG-TPLIGFGGAPFTLAAYLVEGRPSRDHLAARTLMHADPQTWDRLV 210
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ + ++ ++L Q+ AG +Q+FD+ AG L ++ A S R ++AV
Sbjct: 211 TWTASLTGDFLRTQVLAGASAVQLFDSWAGSLSLADYTARVAPSSARALAAVADL--GVP 268
Query: 242 FISFAKGAGYMLKNYRRLTDSNAI-----GLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
I F G ++L R + S I G+D+ PL AL + +QGNLDP L
Sbjct: 269 GIHFGTGTAHLLPAMRDVLTSAGIADRTVGVDYRTPLDEALGMIGAGVNLQGNLDPALLA 328
Query: 296 VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+V+ V ++ P + NLGHG+ P+ DP + +V+ V S
Sbjct: 329 APWEVLEAHVRDVVARGAEAPGHVVNLGHGVPPETDPTVLTRVVELVHS 377
>gi|302381477|ref|YP_003817300.1| uroporphyrinogen decarboxylase [Brevundimonas subvibrioides ATCC
15264]
gi|302192105|gb|ADK99676.1| uroporphyrinogen decarboxylase [Brevundimonas subvibrioides ATCC
15264]
Length = 359
Score = 348 bits (894), Expect = 6e-94, Method: Composition-based stats.
Identities = 126/340 (37%), Positives = 186/340 (54%), Gaps = 6/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ VLQG + PP+W MRQAGRYLPEYR +R + +F+ C PE E TLQP+RR
Sbjct: 19 PSLIRVLQGETLERPPVWFMRQAGRYLPEYRALRAEAPDFIAFCLNPEMAAEATLQPMRR 78
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
+ FDAAI+F+DIL+I ALG++V F EGPR+ + + + + + YL + Q
Sbjct: 79 FGFDAAIVFADILLIPQALGQDVWFETGEGPRLGLMPS--VGRMQELAEGAGQYLHQVGQ 136
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGG----FIKDHGQNRVFAYQNSRAFNWLL 181
++S++R +L LIGF GAPWTVA+YM+ G + R +AY + +L
Sbjct: 137 TLSLVRSQLEPERALIGFAGAPWTVATYMLDGHHNTIGKGERATARSYAYAEPEKVDEVL 196
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
L + +A YL Q AG D ++IF++ A L + FE + ++ VR
Sbjct: 197 AVLVEATARYLKMQADAGADALKIFESWAEGLPDDLFERLVLKPHQALVRRVRELGVTVP 256
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVM 301
I F +G+ Y R D + LD + L +Q P+QG LDP+ L VG +
Sbjct: 257 LIGFPRGSALHADRYAREVDVQGVALDTACSLERGKLVQAIKPIQGALDPLLLRVGGAAL 316
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
V+ +++ GSGP+IFNLGHGI P V +V ++K +
Sbjct: 317 DRRVDQLVEAWGSGPWIFNLGHGILPDVPIAHVEQVLKRI 356
>gi|284167553|ref|YP_003405831.1| uroporphyrinogen decarboxylase [Haloterrigena turkmenica DSM 5511]
gi|284017208|gb|ADB63158.1| uroporphyrinogen decarboxylase [Haloterrigena turkmenica DSM 5511]
Length = 337
Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 177/344 (51%), Gaps = 10/344 (2%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ +G PP+WLMRQAGR+LPEYR++R + +F + TP+ +TL
Sbjct: 1 MTT--PLLVRAARGERTERPPVWLMRQAGRHLPEYRELRSE-HSFREAIETPDIAETITL 57
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP RY D ++FSDIL + LG + R GP + P + + + L
Sbjct: 58 QPYERYGVDGVVMFSDILTCLEPLGFDYRIESGVGPVI-PNPVEGPDDVPADHRDVETEL 116
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ + L + +IGF G P+T+ASY ++GG +G R F + AF L
Sbjct: 117 DFVYDLLDRLSASVAETDAVIGFAGGPFTLASYAVAGGADHQNGAIRRFRAEQPAAFEEL 176
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ +DV AEYL Q+ G DV+Q+FDT+A L ++E Y +I+SA+ +A
Sbjct: 177 LERFADVVAEYLRLQVDHGADVVQLFDTYASVLPPADYEEYVRPLHRKILSAI-----DA 231
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F +G G L+ R ++A+ LDW+V + A E PVQGNLDP L +
Sbjct: 232 PTILFVRGMGGRLEQL-RTGGADAVSLDWTVDMEHAREELGTTPVQGNLDPTLLFADPET 290
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ D +++ G ++ NLGHG+ + ++V V+T ++
Sbjct: 291 VRDRTARMIEAAGPRGYVCNLGHGVGKETPIESVAAFVETAKNW 334
>gi|145224500|ref|YP_001135178.1| uroporphyrinogen decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|189083011|sp|A4TCS1|DCUP_MYCGI RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|145216986|gb|ABP46390.1| uroporphyrinogen decarboxylase [Mycobacterium gilvum PYR-GCK]
Length = 354
Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 177/359 (49%), Gaps = 24/359 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W+MRQAGR LPEYR++R K + C+ +
Sbjct: 1 MNTRRELPESPYLAAAAGRKPHRVPVWMMRQAGRSLPEYRELRAK-NTMMQACFDADLIT 59
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V A G ++ V + GP + PI T L
Sbjct: 60 EITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAHPIRTAADVA--TVSPL 117
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ +I L L + LIGF GAP+T+ASY+I GG ++H + + +
Sbjct: 118 RRETVAPVATAIGQLTAAL-GDVALIGFAGAPFTLASYLIEGGPSRNHERTKAMMLGETE 176
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+N L+ L+DV+ E+L Q+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 177 TWNALMAALTDVTIEFLRVQLDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFEALAG 236
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN----AIGLDWSVPL-SFALELQKEGPVQGNLD 290
F G +L + +G+DW L A ++ +QGNLD
Sbjct: 237 Y--GVPMTHFGVGTAELLGAMSEAVSGHGVPAVVGVDWRTSLTDAAARVRPGCALQGNLD 294
Query: 291 PMRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P+ L+ G V+ V +D G+ +FNLGHG+ P DP + D V V
Sbjct: 295 PVVLLAGWPVVERAVRAVVEDGRRAVDA-GATGHVFNLGHGVLPATDPAIITDAVALVH 352
>gi|315444831|ref|YP_004077710.1| uroporphyrinogen decarboxylase [Mycobacterium sp. Spyr1]
gi|315263134|gb|ADT99875.1| uroporphyrinogen decarboxylase [Mycobacterium sp. Spyr1]
Length = 360
Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 177/359 (49%), Gaps = 24/359 (6%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
MN R++ L G + P+W+MRQAGR LPEYR++R K + C+ +
Sbjct: 7 MNTRRELPESPYLAAAAGRKPHRVPVWMMRQAGRSLPEYRELRAK-NTMMQACFDADLIT 65
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQP+RR+ DAAILFSDI+V A G ++ V + GP + PI T L
Sbjct: 66 EITLQPVRRHGVDAAILFSDIVVPLRAAGIDLDIVPDVGPVIAHPIRTAADVA--TVSPL 123
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ +I L L + LIGF GAP+T+ASY+I GG ++H + + +
Sbjct: 124 RRETVAPVATAIGQLTAAL-GDVALIGFAGAPFTLASYLIEGGPSRNHERTKAMMLGETE 182
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+N L+ L+DV+ E+L Q+ AGVD IQ+FD+ AG L ++ Y R+ A+
Sbjct: 183 TWNALMAALTDVTIEFLRVQLDAGVDAIQVFDSWAGTLSLADYRAYVLPHSARVFEALAG 242
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSN----AIGLDWSVPL-SFALELQKEGPVQGNLD 290
F G +L + +G+DW L A ++ +QGNLD
Sbjct: 243 Y--GVPMTHFGVGTAELLGAMSEAVSGHGVPAVVGVDWRTSLTDAAARVRPGCALQGNLD 300
Query: 291 PMRLVVGNQVMIDGV-------NAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P+ L+ G V+ V +D G+ +FNLGHG+ P DP + D V V
Sbjct: 301 PVVLLAGWPVVERAVRAVVEDGRRAVDA-GATGHVFNLGHGVLPATDPAIITDAVALVH 358
>gi|148284564|ref|YP_001248654.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str.
Boryong]
gi|166234265|sp|A5CDS4|DCUP_ORITB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|146740003|emb|CAM80076.1| uroporphyrinogen decarboxylase [Orientia tsutsugamushi str.
Boryong]
Length = 342
Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 129/340 (37%), Positives = 196/340 (57%), Gaps = 4/340 (1%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
KI++ + N PIW MRQAGRYLPEY+ +++ +F ++CY P E TLQPI R
Sbjct: 2 SKIIQAFHSSNKNYTPIWFMRQAGRYLPEYQVLKRTTNSFFELCYNPIKAAEATLQPIAR 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
++FDAAI+FSDILV+ D+LG N+RF+ N P + I + + ++ +++
Sbjct: 62 FDFDAAIIFSDILVLPDSLGINIRFINNLCPTAEKIPNLLDLQKSKIQNTKISK---VYE 118
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+I I+RKKL +LIGFCG PWTV +Y++ + + + ++ L+
Sbjct: 119 AIDIVRKKLNKKKSLIGFCGGPWTVLTYILGYNSRNTPKFHEIKSNNKHELIVDSINILT 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ ++L QI AG D++QIFD+ AG L EF Y + I+ ++ K+P+ K I F
Sbjct: 179 KHTIDHLANQILAGADIVQIFDSWAGILPYQEFSEYVIKPTSNIVKTLKEKFPHIKIIGF 238
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG- 304
KGAG + Y + T+ + I D+ + L L+LQK VQGNL+P ++ N +I+
Sbjct: 239 PKGAGKLYHKYTKETNVDGISCDYDLQLDEMLKLQKNVLVQGNLNPNTILSKNSKIIEES 298
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
V I+D L + FIFNLGHGI P+ KNV +VK V++
Sbjct: 299 VIKIMDTLSNNRFIFNLGHGILPETPIKNVELIVKLVKNY 338
>gi|313894132|ref|ZP_07827698.1| uroporphyrinogen decarboxylase [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441696|gb|EFR60122.1| uroporphyrinogen decarboxylase [Veillonella sp. oral taxon 158 str.
F0412]
Length = 347
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 171/343 (49%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++
Sbjct: 2 NTAYLDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
Y DAAIL+ DI+ A+ NV GP PI + D + I
Sbjct: 61 EYGVDAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVEKLDAFD--PTKVDYI 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+
Sbjct: 119 GKTITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDVWNALMTK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S YL Q AG + +QIFD+ G + +++ + RII V+ KYP+
Sbjct: 178 LADMSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + L + I LDW + A E VQGNLDP L + +
Sbjct: 238 MNGVGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFADEKTLAR 296
Query: 304 GVNAI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I L+ + G IFNLGHG+ P+ DPK + L V
Sbjct: 297 EVDRILLEGIRYGRHIFNLGHGVFPEADPKKLHWLTDYVHERS 339
>gi|149922633|ref|ZP_01911061.1| uroporphyrinogen decarboxylase [Plesiocystis pacifica SIR-1]
gi|149816519|gb|EDM76016.1| uroporphyrinogen decarboxylase [Plesiocystis pacifica SIR-1]
Length = 325
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 123/327 (37%), Positives = 182/327 (55%), Gaps = 13/327 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEYR IR K +FL++C TPE E+TLQPI R + DAAILFSDILV+ DA+
Sbjct: 1 MRQAGRYLPEYRAIRSKV-SFLELCRTPELAAEVTLQPIDRLDVDAAILFSDILVVFDAM 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
V F GP++ P+ T+ + L + ++ +K L + + LIGF
Sbjct: 60 DVAVEFKP--GPQLPSPVRTRADVE-GLRWGEPVGELEYVMNAVRACKKALADRVPLIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
CGAP+T SY+I GG +D + + + F L+ +SD+ A YLI QI AGVD +
Sbjct: 117 CGAPFTTCSYLIEGGGSRDFLEVKKLLFTEPALFRSLMANMSDLLARYLIGQIDAGVDAV 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRR 258
QIFD+ AG LG ++ + ++ V+ P I FA+G +L +
Sbjct: 177 QIFDSWAGALGPRDYIEHVLPHTRTLVERVQAHIPEGRDQPVPVILFARGNMNILGATAQ 236
Query: 259 LTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL-DVLGSGP 316
+ ++ +G+DWS+ + A+E + + VQGNLDP L+ +++ D V +L + G+
Sbjct: 237 VP-ADVVGVDWSIGMDQAIEIVGSDRVVQGNLDPGVLLGSPELIRDRVRDVLREAAGAKA 295
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI+ +P + +V V
Sbjct: 296 HIFNLGHGISRVTNPDHAKAMVDAVHE 322
>gi|293194181|ref|ZP_06609944.1| uroporphyrinogen decarboxylase [Actinomyces odontolyticus F0309]
gi|292819766|gb|EFF78778.1| uroporphyrinogen decarboxylase [Actinomyces odontolyticus F0309]
Length = 365
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 113/365 (30%), Positives = 168/365 (46%), Gaps = 27/365 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELT 59
M ++ L G P P+W MRQAGR LPEYR++R L+ C P+ E T
Sbjct: 1 MTT--PPLIAALTGQR-GPTPVWFMRQAGRSLPEYRELRADVGLPMLEACLRPDVAAEAT 57
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPN------ 112
+QP+RR+ DA I FSDI+V G V GP +D P T+E +
Sbjct: 58 VQPVRRHGVDAGIFFSDIMVPLRLAGVGVEIEPGVGPVLDHPYRTRESIDELLSHRYGEG 117
Query: 113 --------IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+ ++ ++L +LIGF GAP+T+A+YM+ G +DH
Sbjct: 118 SWTDSTGRARDCAEGAQSVRDGVATAVREL-GSTSLIGFGGAPFTLAAYMVEGRPSRDHM 176
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
R A + A++ L+++ + VSA+++ AQI AG Q+FD+ G L + A
Sbjct: 177 AARSLAASDPGAWDALMNWCAWVSADFITAQIEAGASAAQLFDSWVGSLSPRTYRESVAP 236
Query: 225 SVGRIISAVRRKY-----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+ V A I F G+ +L + + ++ +G+DW LS+A+
Sbjct: 237 YSRLVAQRVAGAVSPVTGERAPLIHFGTGSAPILADMAEV-GADCVGVDWKTDLSWAVTQ 295
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLV 338
VQGNLDP L V+ V ILD S +FNLGHG+ P DP + +V
Sbjct: 296 VPGKAVQGNLDPALLQAPWNVIEQAVRDILDAGRSASGHVFNLGHGVPPTTDPDVLTRIV 355
Query: 339 KTVRS 343
+ V
Sbjct: 356 ELVHE 360
>gi|269797283|ref|YP_003311183.1| uroporphyrinogen decarboxylase [Veillonella parvula DSM 2008]
gi|269093912|gb|ACZ23903.1| uroporphyrinogen decarboxylase [Veillonella parvula DSM 2008]
Length = 353
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 171/343 (49%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++
Sbjct: 8 NTAYLDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVK 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
Y DAAIL+ DI+ A+ NV GP PI + D + I
Sbjct: 67 EYGVDAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVDKLETFD--PTKVDYI 124
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+
Sbjct: 125 AKTITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDMWNALMTK 183
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S YL Q AG + +QIFD+ G + +++ + RII V+ KYP+
Sbjct: 184 LADMSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMA 243
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + L + I LDW + A E VQGNLDP L + +
Sbjct: 244 MNGVGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAR 302
Query: 304 GVNAI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I LD + G IFNLGHG+ P+ DP+ + L V
Sbjct: 303 EVDRILLDGVRYGRHIFNLGHGVFPEADPQKLHWLTDYVHERS 345
>gi|323449657|gb|EGB05543.1| hypothetical protein AURANDRAFT_30614 [Aureococcus anophagefferens]
Length = 389
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 13/351 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L +G + P+W+MRQAGR++ YR + KK+ F + PE +E++LQP
Sbjct: 39 PLLLRAARGEAVERTPVWMMRQAGRHMQVYRDLVKKYPTFRERSEIPEAALEISLQPWEA 98
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-EIYLLNPNIDLFLNYLLPIF 124
Y D ILFSDIL A+G + + E + PI T+ + L +
Sbjct: 99 YGVDGVILFSDILTPLPAMGVDFQISEGGAIAISPIRTEAHLAELKKANFDAATACPFVG 158
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISG--GFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + LR K+ + T++GF G P+T+ASY++ G G + + + +LD
Sbjct: 159 EVLGKLRDKVGSSATVLGFVGLPFTLASYLVEGKTGTTSGFAEVGKMRSEQPELLHGILD 218
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L++ Y Q+ +G VIQ+FD+ AG L E ++ +A ++I A++ K+P
Sbjct: 219 LLAENIGAYACYQVESGAQVIQVFDSWAGHLPEDQYLEFAVPYQKKVIEAIKAKHPETPV 278
Query: 243 ISF------AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
I + +K G++ ++ + ++ + +D++V L +QGNLDP L
Sbjct: 279 IIYMAPDVHSKDGGFL--DHLAASGADCVSVDYTVDFGETRARLPAGVAMQGNLDPKILR 336
Query: 296 VGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G + + IL I NLGHGI + V TV++ +
Sbjct: 337 DGPLDKIKEETEKILAAGNCNMHIMNLGHGIEADTPEPHAKFFVDTVQAFR 387
>gi|282849317|ref|ZP_06258702.1| uroporphyrinogen decarboxylase [Veillonella parvula ATCC 17745]
gi|282581021|gb|EFB86419.1| uroporphyrinogen decarboxylase [Veillonella parvula ATCC 17745]
Length = 347
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 173/343 (50%), Gaps = 7/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++
Sbjct: 2 NTAYLDMIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVK 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
Y DAAIL+ DI+ A+ NV GP PI + + D + I
Sbjct: 61 EYGVDAAILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSMADVEALDSFD--PTKVEYI 118
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I++L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+
Sbjct: 119 GKTITLLTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPHVWNALMTK 177
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+D+S YL Q AG + +QIFD+ G + +++ + RII AV+ KYP+
Sbjct: 178 LADMSIAYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKAVKAKYPHLPIA 237
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
G +++ + L + I LDW + A E VQGNLDP L + +
Sbjct: 238 MNGVGTDHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAH 296
Query: 304 GVNAI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V+ I L+ + G IFNLGHG+ P+ DP+ + L V
Sbjct: 297 EVDRILLEGVRYGRHIFNLGHGVFPEADPQKLHWLTDYVHERS 339
>gi|332668765|ref|YP_004451772.1| uroporphyrinogen decarboxylase [Cellulomonas fimi ATCC 484]
gi|332337802|gb|AEE44385.1| uroporphyrinogen decarboxylase [Cellulomonas fimi ATCC 484]
Length = 354
Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 176/343 (51%), Gaps = 9/343 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ G + P+W MRQAGR LPEYR +R + LD C P E+TLQP+R
Sbjct: 16 NSPLVRAYSGERPSRRPVWFMRQAGRSLPEYRALRAGTR-MLDACLDPGMASEITLQPVR 74
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNI-DLFLNYLLP 122
R++ DAAI FSDI+V G +V GP M P+ T + ++ L L P
Sbjct: 75 RHDVDAAIFFSDIVVPLRLAGVDVEIKPGVGPVMGAPVRTADDVARLRDLGPLTPERLAP 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + ++ +L LIGF GAP+T+A+Y++ GG +DH R + + + + L
Sbjct: 135 VSEGVAATVAQL-GSTPLIGFAGAPFTLAAYLVEGGPSRDHLAARTLMHADPQTWTALTQ 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ +DV+ +L AQ+ AG Q+FD+ AG LG ++ + A + R ++AV + +
Sbjct: 194 WAADVTGAFLRAQVLAGASATQLFDSWAGSLGLADYTAHVAPASARALAAVADL--DVRK 251
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVM 301
+ F G +L R + ++ +G+D+ +PL A L P+QGN+DP L V+
Sbjct: 252 VHFGTGTSELLAAMRDV-GADVVGVDYRLPLDEANRRLGGTTPLQGNIDPALLAAPWPVL 310
Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V ++ P + NLGHG+ P+ DP + +V V S
Sbjct: 311 EAHVRDVVARGAQAPAHVVNLGHGVPPETDPDVLTRVVTLVHS 353
>gi|154508273|ref|ZP_02043915.1| hypothetical protein ACTODO_00769 [Actinomyces odontolyticus ATCC
17982]
gi|153797907|gb|EDN80327.1| hypothetical protein ACTODO_00769 [Actinomyces odontolyticus ATCC
17982]
Length = 365
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 114/365 (31%), Positives = 168/365 (46%), Gaps = 27/365 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELT 59
M ++ L G P P+W MRQAGR LPEYR++R L+ C P+ E T
Sbjct: 1 MTT--PPLIAALTGQR-GPTPVWFMRQAGRSLPEYRELRADVGLPMLEACLRPDVAAEAT 57
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPN------ 112
+QP+RR+ DA I FSDI+V G V GP +D P T+E +
Sbjct: 58 VQPVRRHGVDAGIFFSDIMVPLRLAGVGVEIEPGVGPVLDHPYRTRESIDELLSHRYGEG 117
Query: 113 --------IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+ ++ ++L +LIGF GAP+T+A+YM+ G +DH
Sbjct: 118 SWTDSTGRARDCAEGAQSVRDGVATAVREL-GSTSLIGFGGAPFTLAAYMVEGRPSRDHM 176
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
R A + A++ L+++ + VSA+++ AQI AG Q+FD+ G L + A
Sbjct: 177 AARSLAASDPGAWDALMNWCAWVSADFITAQIEAGASAAQLFDSWVGSLSPRTYRESVAP 236
Query: 225 SVGRIISAVRRKY-----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+ V A I F G+ +L + + + +G+DW LS+A+
Sbjct: 237 YSRLVAQRVAGAVSPVTGERAPLIHFGTGSAPILADMAEV-GVDCVGVDWKTDLSWAVTQ 295
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLV 338
VQGNLDP L V+ V ILD S P +FNLGHG+ P DP + +V
Sbjct: 296 VPGKAVQGNLDPALLQAPWHVIEQAVRDILDAGRSAPGHVFNLGHGVPPTTDPDVLTRIV 355
Query: 339 KTVRS 343
+ V
Sbjct: 356 ELVHE 360
>gi|237838243|ref|XP_002368419.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii ME49]
gi|211966083|gb|EEB01279.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii ME49]
Length = 665
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 114/374 (30%), Positives = 177/374 (47%), Gaps = 48/374 (12%)
Query: 14 GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN-FDAAI 72
G P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA I
Sbjct: 281 GEEPFLTPVWMMRQAGRYLPEFRNMRRQHG-FLEVCRDPRLASELTLQPYRRFPQLDAVI 339
Query: 73 LFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
+FSDILVI +A+G + E GPR P Q++ P+I+ L Y +F ++
Sbjct: 340 IFSDILVIPEAMGMKLSMEEGVGPRFAWRIESPADMQKLN-FKPDIEETLGY---VFDAV 395
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ ++L I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D+
Sbjct: 396 YVTSQQLAGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITDI 455
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
EYL+ Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 456 CVEYLVGQVDAGAQVLQVFDTNASQFAAETYDEIGAPYMASIAERVKARRPHVTMIAFPK 515
Query: 248 -----------------GAGYMLKNY-------------------RRLTDSNAIGLDWSV 271
G+ +++ LT S+A +
Sbjct: 516 DRPSAGFADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESDR 575
Query: 272 PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP 331
+ +QGNLDP L + ++ G G I NLGHG+ P++ P
Sbjct: 576 DRKSDVR-GDRKALQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMKP 634
Query: 332 KNVLDLVKTVRSEK 345
++ + V+
Sbjct: 635 EHAKAFIDGVKEAS 648
>gi|221505711|gb|EEE31356.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii VEG]
Length = 665
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 113/375 (30%), Positives = 177/375 (47%), Gaps = 48/375 (12%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN-FDAA 71
G P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA
Sbjct: 280 AGEEPFLTPVWMMRQAGRYLPEFRNMRRQHG-FLEVCRDPRLASELTLQPYRRFPQLDAV 338
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
I+FSDILVI +A+G + E GPR P Q++ P+++ L Y +F +
Sbjct: 339 IIFSDILVIPEAMGMKLSMEEGVGPRFAWRIESPADMQKLN-FKPDVEGTLGY---VFDA 394
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + ++L I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D
Sbjct: 395 VYVTSQQLAGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITD 454
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ EYL+ Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F
Sbjct: 455 ICVEYLVGQVDAGAQVLQVFDTNASQFAAETYDEIGAPYMASIAKRVKARRPHVTMIAFP 514
Query: 247 K-----------------GAGYMLKNY-------------------RRLTDSNAIGLDWS 270
K G+ +++ LT S+A +
Sbjct: 515 KDRPSAGFADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESD 574
Query: 271 VPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
+ +QGNLDP L + ++ G G I NLGHG+ P++
Sbjct: 575 RDRKSDVR-GDRKALQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMK 633
Query: 331 PKNVLDLVKTVRSEK 345
P++ + V+
Sbjct: 634 PEHAKAFIDGVKEAS 648
>gi|221484311|gb|EEE22607.1| uroporphyrinogen decarboxylase, putative [Toxoplasma gondii GT1]
Length = 665
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 114/375 (30%), Positives = 177/375 (47%), Gaps = 48/375 (12%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN-FDAA 71
G P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DA
Sbjct: 280 AGEEPFLTPVWMMRQAGRYLPEFRNMRRQHG-FLEVCRDPRLASELTLQPYRRFPQLDAV 338
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
I+FSDILVI +A+G + E GPR P Q++ P+I+ L Y +F +
Sbjct: 339 IIFSDILVIPEAMGMKLSMEEGVGPRFAWRIESPADMQKLN-FKPDIEGTLGY---VFDA 394
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + ++L I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D
Sbjct: 395 VYVTSQQLAGAIPLIGFCGGPLTLLTYMVEGGGSKTWRQAKKFVYEHPEATHTLLQVITD 454
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ EYL+ Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F
Sbjct: 455 ICVEYLVGQVDAGAQVLQVFDTNASQFAAEAYDEIGAPYMASIAKRVKARRPHVTMIAFP 514
Query: 247 K-----------------GAGYMLKNY-------------------RRLTDSNAIGLDWS 270
K G+ +++ LT S+A +
Sbjct: 515 KDRPSAGFADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESD 574
Query: 271 VPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
+ +QGNLDP L + ++ G G I NLGHG+ P++
Sbjct: 575 RDRKSDVR-GDRKALQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMK 633
Query: 331 PKNVLDLVKTVRSEK 345
P++ + V+
Sbjct: 634 PEHAKAFIDGVKEAS 648
>gi|289548317|ref|YP_003473305.1| uroporphyrinogen decarboxylase [Thermocrinis albus DSM 14484]
gi|289181934|gb|ADC89178.1| uroporphyrinogen decarboxylase [Thermocrinis albus DSM 14484]
Length = 336
Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 10/343 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L+ ++G I P+WLMRQAGRY+P+YR++R K +FL C + E++L P+
Sbjct: 2 KNPLLLQSIKGEPIKRFPVWLMRQAGRYMPQYRELRNKAPDFLTFCKDVKLATEVSLLPL 61
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
DA I+FSDIL+ + +G V F + EGP ++ E+ L ++++ I
Sbjct: 62 HLLGVDAIIIFSDILIPLEPMGVKVSFKDGEGPSLE--WDGEVKNLRVPSFREVSFVGEI 119
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ + L+K+ + +IGFCG P+T+ASY+I GG + + F + + L++
Sbjct: 120 IEEVKRLQKE----VPVIGFCGGPFTLASYIIEGGSSSTLKKTKTFMWNRKDEWEHLMNL 175
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L + YL+ Q AG DV+QIFDT L +FENY R + R++ V+ K I
Sbjct: 176 LVETLTHYLVGQAKAGADVLQIFDTWISYLPFEDFENY-KRWLLRLVMQVKEKT-QVPII 233
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
F +G+ L+ +A+ +DW+V + ++ QGN+DP L V+I+
Sbjct: 234 YFFRGSSSFLEALEGE-KLDAVSVDWTVDMIGWMKRAPHLTFQGNMDPSLLYCEEDVIIE 292
Query: 304 GVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L + S +IFNLGHG++P +D V LV TV+S
Sbjct: 293 KTRGLLQKVPRSTRYIFNLGHGLSPDMDLNKVKLLVNTVKSFS 335
>gi|222475640|ref|YP_002564057.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Florida]
gi|255003633|ref|ZP_05278597.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Puerto Rico]
gi|222419778|gb|ACM49801.1| uroporphyrinogen decarboxylase (hemE) [Anaplasma marginale str.
Florida]
Length = 346
Score = 344 bits (884), Expect = 8e-93, Method: Composition-based stats.
Identities = 137/351 (39%), Positives = 203/351 (57%), Gaps = 15/351 (4%)
Query: 2 NERKQKIL-EVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
++++ ++L VL + PIW MRQAGRYLPEY ++ F+NFLD CYTPE E+T
Sbjct: 4 SKKQSRVLERVLTKKERQEKIPIWFMRQAGRYLPEYHKVMDNFQNFLDACYTPEVVEEIT 63
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP++R++ DAAI+FSDI+V+ DALG V F+ +GP++ I Q + +
Sbjct: 64 LQPVKRFDIDAAIIFSDIMVVLDALGYEVSFIRGQGPKIGNIIHQY------STTESIAK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-----FIKDHGQNRVFAYQNS 174
L P+F+ I +RK L + TLIGF G+PWT+ +Y++ KD V + +
Sbjct: 118 LQPVFEGIRKVRKSLDSDKTLIGFAGSPWTLLTYVLGKENNFLKIRKDICLETVHKHTKN 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ L++ ++D+++ YL QI +GVDVIQ+FD+ A L FE Y +I+ VR
Sbjct: 178 KVT-ELVNRITDLTSHYLAKQIESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFVR 236
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL 294
++PN I F GAG M K Y T +AI +D+S+P S+ E +G +QGNLDP L
Sbjct: 237 VRHPNFPIIGFPMGAGVMYKTYLEKTGISAISVDYSIPTSWIKEHL-DGVIQGNLDPSLL 295
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ I++ LG P IFNLGHGI P+ ++V L+++VR
Sbjct: 296 AYNQKASDSQSMKIVEELGDKPLIFNLGHGILPETPIQHVESLIRSVRKAS 346
>gi|315497194|ref|YP_004085998.1| uroporphyrinogen decarboxylase [Asticcacaulis excentricus CB 48]
gi|315415206|gb|ADU11847.1| uroporphyrinogen decarboxylase [Asticcacaulis excentricus CB 48]
Length = 341
Score = 344 bits (884), Expect = 1e-92, Method: Composition-based stats.
Identities = 128/343 (37%), Positives = 181/343 (52%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M I+ VLQG + PP+W MRQAGR+LPEYR++R +FL C PE E TL
Sbjct: 1 MTSHTPSIVSVLQGQTLKTPPVWFMRQAGRHLPEYRELRATTPDFLSFCLNPEKAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP+RRY D AILFSDILVI ALG++VRF EGP + + + + L
Sbjct: 61 QPVRRYGMDGAILFSDILVIPMALGQDVRFEAGEGPVLGELPL--VAQMADLAGSAGEAL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ ILR +LP +TL+GFCG PWTV +YM++G D R F Y+ + +
Sbjct: 119 KAVGETLKILRSELPREVTLLGFCGGPWTVMTYMLNGRKAHDRSLIRAFVYEKPQLVAQV 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D + + SA+YL Q G V++IF++ A + F+ R++ VR
Sbjct: 179 MDVVIEASAQYLKMQADCGAQVLKIFESWAEGFPDPLFDQLVIEPHQRLVQRVRELGVTL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F +GA +Y D + L + PL +QK+ P+QG LDP+ L G
Sbjct: 239 PIIGFPRGAEARCLDYVEQVDVQGMALGTATPLKLGQAIQKKRPIQGALDPVVLRSGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ D V + G GP+IFNLGHGI P +V + +RS
Sbjct: 299 LDDMVLKMKSAWGQGPYIFNLGHGIFPDTPIAHVERTLHLIRS 341
>gi|223998822|ref|XP_002289084.1| uroporphyrinogen III decarboxylase [Thalassiosira pseudonana
CCMP1335]
gi|220976192|gb|EED94520.1| uroporphyrinogen III decarboxylase [Thalassiosira pseudonana
CCMP1335]
Length = 403
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ G + P+WLMRQAGRY+ +RQ K+ F + TP +EL+LQ R
Sbjct: 51 RDILVRCASGQQVERTPVWLMRQAGRYMSAFRQYSDKYP-FRERSETPSMAIELSLQCHR 109
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNID-LFLNYLLP 122
Y D I+FSDIL LG V+ GP + + T+ +++ + + LP
Sbjct: 110 AYGMDGIIMFSDILTPLPTLGIEFDVVKGLGPVISTEVRTEADVAKLKDVESVNFDETLP 169
Query: 123 IFQSI--SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR----A 176
+ I S+ ++ + +LIGF GAP+T+A+Y I G K + + A
Sbjct: 170 FIREILGSLSKEAEEANTSLIGFVGAPFTLAAYTIEGKSSKHCLSTKKMMMADEDGSSKA 229
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LD L+ + Y QI G VIQ+F++ A L +FE +A + + I ++ K
Sbjct: 230 VSQFLDKLAVMIGNYACHQIECGAQVIQVFESWAHQLSPRQFEAFAKPAAQKAIRIIKEK 289
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
YP+ I FA G L+ ++ + I +DWSV + A + L + P+ GN+DP L
Sbjct: 290 YPDVPVIYFANGGSSYLE-LQKDMGCDMIAVDWSVDMKEARKILGPDIPISGNIDPTILF 348
Query: 296 VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +D G G + NLGHG+ + V LV + +
Sbjct: 349 GTKEQIEQAVRDCIDKAGGPGKHLLNLGHGVMQGTPEEAVGWLVDECKRYR 399
>gi|70780276|gb|AAZ08389.1| uroporphyrinogen III decarboxylase [Toxoplasma gondii]
Length = 665
Score = 344 bits (882), Expect = 1e-92, Method: Composition-based stats.
Identities = 114/375 (30%), Positives = 178/375 (47%), Gaps = 48/375 (12%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN-FDAA 71
G P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP RR+ DAA
Sbjct: 280 AGEEPFLTPVWMMRQAGRYLPEFRNMRRQHG-FLEVCRDPRLASELTLQPYRRFPQLDAA 338
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQS 126
I+FSDILVI +A+G + E GPR P +++ P+I+ L Y +F +
Sbjct: 339 IIFSDILVIPEAMGMKLSMEEGVGPRFAWRIESPADMRKLN-FKPDIEGTLGY---VFDA 394
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ + ++L I LIGFCG P T+ +YM+ GG K Q + F Y++ A + LL ++D
Sbjct: 395 VYVTSQQLAGAIPLIGFCGGPLTLLTYMVEGGGGKTWRQAKKFVYEHPEATHTLLQVITD 454
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
+ EYL+ Q+ AG V+Q+FDT+A ++ A + I V+ + P+ I+F
Sbjct: 455 ICVEYLVGQVDAGAQVLQVFDTNASQFAAEAYDEIGAPYMASIAKRVKARRPHVTMIAFP 514
Query: 247 K-----------------GAGYMLKNY-------------------RRLTDSNAIGLDWS 270
K G+ +++ LT S+A +
Sbjct: 515 KDRPSAGFADSAFDVISLGSSAEIESMQRRFSGQCEEKIDQVTAGEAELTRSDASATESD 574
Query: 271 VPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
+ +QGNLDP L + ++ G G I NLGHG+ P++
Sbjct: 575 RDRKSDVR-GDRKALQGNLDPQVLYTDTATIKRETAKMIRRFGVGRHIANLGHGMEPEMK 633
Query: 331 PKNVLDLVKTVRSEK 345
P++ + V+
Sbjct: 634 PEHAKAFIDGVKEAS 648
>gi|171462855|ref|YP_001796968.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192393|gb|ACB43354.1| uroporphyrinogen decarboxylase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 347
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 118/339 (34%), Positives = 175/339 (51%), Gaps = 25/339 (7%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPEY R + +FL + P Y E+TLQP+ RY DAAILFSDIL I DA+
Sbjct: 1 MRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTIPDAM 60
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL----PNHIT 139
G ++F EGP + P+ T+E D ++ L +F ++S +RK L +
Sbjct: 61 GLGLKFTAGEGPSFECPLRTEEAIKKLRLAD--MDQLKYVFDAVSEIRKALIQDGKQRVP 118
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A YMI G D + + +LD + A YLI Q+ AG
Sbjct: 119 LIGFSGSPWTLACYMIDGSSADDFRHAKTMMFSRPDLMQHILDINAQSVAAYLIEQVKAG 178
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYR 257
+ IFDT G L + ++ + S+ ++I+ + R++ I F KG L +
Sbjct: 179 AQALMIFDTWGGMLPDGWYQKMSLASMQKVIAMLPREHEGRKIPVILFTKGGAIWLNDMA 238
Query: 258 RLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLG 313
+ ++ I LDW++ LS A + + K +QGNLDP+ L + + + N +L+ L
Sbjct: 239 Q-AGADVIALDWTMSLSRARKQLLAIDKPLALQGNLDPLILFAEPKRITEQANLLLEDLA 297
Query: 314 SGP-----------FIFNLGHGITPQVDPKNVLDLVKTV 341
S P +FNLGHG + P++V L + V
Sbjct: 298 SAPVLKSGLHPLDGHVFNLGHGTSQFTPPESVTALAEAV 336
>gi|269103662|ref|ZP_06156359.1| uroporphyrinogen III decarboxylase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163560|gb|EEZ42056.1| uroporphyrinogen III decarboxylase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 292
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 94/288 (32%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+RR+ DAAILFSDIL I DA+G + F EGP+ + T + + + L
Sbjct: 1 MRRFELDAAILFSDILTIPDAMGLGLYFEAGEGPKFERPITCKADVDKIGLPDPEGELQY 60
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y + + LLD
Sbjct: 61 VMNAVRQIRKDLQGQVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQTLHLLLD 120
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--A 240
L+D EYL AQI AG + +FDT G L ++ ++ R + +I+ + R+
Sbjct: 121 KLADSVIEYLNAQIKAGAQAVMVFDTWGGVLTPRDYNEFSLRYMHKIVDGLIRENEGRRV 180
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQ 299
F K G L+ T + +GLDW++ ++ A + + +QGN+DP L +
Sbjct: 181 PVTLFTKNGGMWLEQIAA-TGCDGVGLDWTIDIAEAKRRIGDKVALQGNMDPSMLYAQPE 239
Query: 300 VMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ V IL+ G G +FNLGHGI V P+N V V
Sbjct: 240 RIRQEVATILEGFGDGGTGHVFNLGHGIHLDVPPENAEVFVNAVHELS 287
>gi|322711595|gb|EFZ03168.1| uroporphyrinogen decarboxylase [Metarhizium anisopliae ARSEF 23]
Length = 376
Score = 343 bits (880), Expect = 2e-92, Method: Composition-based stats.
Identities = 110/380 (28%), Positives = 171/380 (45%), Gaps = 58/380 (15%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L W AGRYLPEY + + ++F + C PE LTLQP+
Sbjct: 9 KNDLLLRAA----------W----AGRYLPEYHEAK-GNRDFFECCRDPEIASTLTLQPV 53
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
R+ DAAI+FSDILVI A+G V V+ +GP +P+ T + +LN ++ +
Sbjct: 54 ERFAGLLDAAIIFSDILVIPQAMGMEVEMVDKKGPHFPNPLKTPKDGQYDQVLNRDVQVA 113
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ RKK+ + LIGFCGAPWT+ YM+ GG K ++ + Y+
Sbjct: 114 -KELDYVYKAITLTRKKIAGRVPLIGFCGAPWTLFCYMVEGGGTKLFAHSKTWIYKYPEE 172
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++D+ ++L Q+ AG ++ +FD+ AG L F ++ + I + K
Sbjct: 173 SKRLLSKIADICVDHLARQVEAGAQMVMVFDSWAGELSPSSFREFSEPYLSHIAQKLPSK 232
Query: 237 -----YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNL 289
F KGA Y L + L N +G+DW AL ++ QGN
Sbjct: 233 LKSLGLDRVPMTVFPKGAWYALDSVCNL-GYNVVGMDWLQDPVAALRIRGSRNVVFQGNA 291
Query: 290 DPMRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGH------------------------ 323
DP L + + V ++ +I NLGH
Sbjct: 292 DPGVLYGTKEAITLAVEQMVKGFWVDKKGWIANLGHGMAQAETNNLCWPSDLRIANHIPC 351
Query: 324 -GITPQVDPKNVLDLVKTVR 342
GITP VDP N+ + +
Sbjct: 352 TGITPGVDPDNLKHFFEEIH 371
>gi|325092952|gb|EGC46262.1| uroporphyrinogen decarboxylase [Ajellomyces capsulatus H88]
Length = 323
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 107/306 (34%), Positives = 168/306 (54%), Gaps = 16/306 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPI 67
Query: 64 RRY--NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP P+ + + +L+ N+D+
Sbjct: 68 ERYVGLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPLKSPDDPQYRQILDKNVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 -KELDYVYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYRYPEA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +++ + I + + ++
Sbjct: 187 SKALLQKIAEICVEYLALQVVAGSQLVQVFDSWAGELSPASFADFSLPYLRYISANLPKR 246
Query: 237 Y-----PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLD 290
FAKGA Y L + + + +GLDW A+ + + +QGN D
Sbjct: 247 LAELGQEAVPMTVFAKGAWYALDSLCG-SGYDVVGLDWLHDPVEAMNIARGRVTLQGNAD 305
Query: 291 PMRLVV 296
P L
Sbjct: 306 PGCLYG 311
>gi|294793134|ref|ZP_06758280.1| uroporphyrinogen decarboxylase [Veillonella sp. 6_1_27]
gi|294794828|ref|ZP_06759963.1| uroporphyrinogen decarboxylase [Veillonella sp. 3_1_44]
gi|294454190|gb|EFG22564.1| uroporphyrinogen decarboxylase [Veillonella sp. 3_1_44]
gi|294456079|gb|EFG24443.1| uroporphyrinogen decarboxylase [Veillonella sp. 6_1_27]
Length = 340
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 112/337 (33%), Positives = 169/337 (50%), Gaps = 7/337 (2%)
Query: 11 VLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y DA
Sbjct: 1 MIQGKNPGVTPVWYMRQAGRSQAEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGVDA 59
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISI 129
AIL+ DI+ A+ NV GP PI + D + I ++I++
Sbjct: 60 AILYKDIMSPMVAMNVNVELKAGVGPVFSTPIRSIADVDKLETFD--PTKVDYIAKTITL 117
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D+S
Sbjct: 118 LTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDMWNALMTKLADMSI 176
Query: 190 EYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA 249
YL Q AG + +QIFD+ G + +++ + RII V+ KYP+ G
Sbjct: 177 AYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKAKYPHLPMAMNGVGT 236
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI- 308
+++ + L + I LDW + A E VQGNLDP L + + V+ I
Sbjct: 237 DHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFGDEKTLAREVDRIL 295
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD + G IFNLGHG+ P+ DPK + L V
Sbjct: 296 LDGVRYGRHIFNLGHGVFPEADPKKLHWLTDYVHERS 332
>gi|296118426|ref|ZP_06837005.1| uroporphyrinogen decarboxylase [Corynebacterium ammoniagenes DSM
20306]
gi|295968567|gb|EFG81813.1| uroporphyrinogen decarboxylase [Corynebacterium ammoniagenes DSM
20306]
Length = 325
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 20/332 (6%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR R+ LD C+ PE E+TLQP+RR++ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRTAREGI-TMLDSCFMPELLAEITLQPVRRHDVDAAILFSDIVVPLRAA 59
Query: 85 GRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V GP MD P+ T+ P +D ++ + I I+ +L + LIGF
Sbjct: 60 GIGVDIVAGRGPVMDKPVRTRSDIDNLPILD---EHVDEVADGIRIILDELTDTQALIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG K+H + + + ++ L+ L +L QI AG+D +
Sbjct: 117 VGAPFTLASYLVEGGPSKNHEKTKALMHSEPETWHALMKRLVPTIINFLDVQIDAGIDAM 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
Q+FD+ AG L ++ Y +I+ V+ I F G G +L S
Sbjct: 177 QLFDSWAGYLNREDYRKYVLPYSTQILDHVQGV---VPRIHFGVGTGELLPAMAE-AGSE 232
Query: 264 AIGLDWSVPLSFALEL----QKEGPVQGNLDPMRLVVGNQVMIDGVNAILD-------VL 312
+G+D+ V + A E +QGNLDP L G+ + V +I D
Sbjct: 233 VMGVDYRVRMDEAAERIHAAHGAHALQGNLDPAMLFAGDDAVRQAVRSIRDQVATAQQAG 292
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I+NLGHG+ P + + + V + E
Sbjct: 293 HATGHIWNLGHGVLPTTEAEAITRAVAIIHEE 324
>gi|238019893|ref|ZP_04600319.1| hypothetical protein VEIDISOL_01769 [Veillonella dispar ATCC 17748]
gi|237863417|gb|EEP64707.1| hypothetical protein VEIDISOL_01769 [Veillonella dispar ATCC 17748]
Length = 340
Score = 342 bits (878), Expect = 4e-92, Method: Composition-based stats.
Identities = 110/337 (32%), Positives = 169/337 (50%), Gaps = 7/337 (2%)
Query: 11 VLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA 70
++QG P+W MRQAGR EYR+I++K+ F ++ PE +T P++ Y DA
Sbjct: 1 MIQGKNPGVTPVWYMRQAGRSQTEYRKIKEKYTLF-EITKEPELCARVTELPVKEYGVDA 59
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISI 129
AIL+ DI+ + V GP + PI + D + I ++I++
Sbjct: 60 AILYKDIMSPMVGMNVKVELKAGVGPVFNTPIRSMVDVDKLDAFD--PTKVDYIGKTITL 117
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
L + + + LIGFCGAP+T+ASY+I GG K++ + R +N L+ L+D+S
Sbjct: 118 LTSGMLD-VPLIGFCGAPFTIASYLIEGGPTKNYNKTRGMLIGAPDVWNALMTKLADMSI 176
Query: 190 EYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA 249
EYL Q AG + +QIFD+ G + +++ + RII V+ +YP+ G
Sbjct: 177 EYLSMQAEAGANALQIFDSWVGAVNADQYKQGIYPHMERIIKTVKERYPHLPMAMNGVGT 236
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI- 308
+++ + L + I LDW + A E VQGNLDP L + + V+ I
Sbjct: 237 DHLVSIWSHLP-LDVIALDWRSSIVMANERGVTQTVQGNLDPAYLFADEKTLAHEVDRIL 295
Query: 309 LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
LD + G IFNLGHG+ P+ DPK + L V
Sbjct: 296 LDGVRYGRHIFNLGHGVFPEADPKKLHWLTDYVHERS 332
>gi|297627044|ref|YP_003688807.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922809|emb|CBL57387.1| Uroporphyrinogen decarboxylase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 632
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 111/342 (32%), Positives = 174/342 (50%), Gaps = 10/342 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L +G P+W MRQAGR LPEYR R+ L+ C P ELTLQP+R
Sbjct: 290 DSALLSACRGERPARTPVWFMRQAGRSLPEYRAAREST-TMLESCLDPALAAELTLQPVR 348
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
RY DAAI +SDI+V G +V GP + P+ +++ P + L PI
Sbjct: 349 RYGVDAAIFYSDIMVPLKLAGVDVEIEPGVGPVLAHPVRSRDDIAALPTLTD--EALTPI 406
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I + +LP+ + LIGF GAP+TVASY++ G + H + + + +A+ LL++
Sbjct: 407 REAIGRVTTQLPD-VPLIGFAGAPFTVASYLVEGRPNRTHPRTHELMHDDPQAWEALLEW 465
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+++V +L AQ+ AG +Q+FD+ G L ++ + + GR++ A+ I
Sbjct: 466 VAEVDIAFLRAQVLAGASAVQLFDSWVGELSLVDYLVHVQPASGRVLRALGEL--GVPRI 523
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMI 302
F G G++L R ++ +G+ + L A E L P+QGN+DP L + +
Sbjct: 524 HFGTGTGHLLVAMRD-AGADVMGVGADLTLDAANELLGGRTPLQGNIDPAVLAGSPEAVD 582
Query: 303 DGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
V A+L G+ P I NL HG+ DP + +V V
Sbjct: 583 AAVAAVLTAGGAAPAHIVNLAHGVPKDTDPDVLAHIVDLVHG 624
>gi|325193804|emb|CCA28013.1| uroporphyrinogen decarboxylase putative [Albugo laibachii Nc14]
Length = 332
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 106/329 (32%), Positives = 177/329 (53%), Gaps = 11/329 (3%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR+LPE+R +RK +F MC PE VE++LQP RRY DA I+FSDILVI A+
Sbjct: 1 MRQAGRHLPEFRSLRKAGYDFFMMCTVPELAVEVSLQPFRRYGVDAVIIFSDILVIPMAM 60
Query: 85 GRNVRFVENEGPRMD-PITTQEIYL---LNPNIDLFLNYLLPIFQSISILRKKLPNHITL 140
G + V + GP PI + L P+I+ L Y + +I++ R+++ + L
Sbjct: 61 GMQISMVPSVGPVFSKPIRDLKDVETLNLTPDIEESLGY---VLDAINLARQEIDGQVPL 117
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
IGFCG P T+ YMI G + + F Y++ + LL L+D+ +L+AQ AG
Sbjct: 118 IGFCGGPLTLLCYMIEGRGSRTKSIFKTFLYEHPAKVHTLLYALTDICIRFLVAQQRAGA 177
Query: 201 DVIQIFDTH-AGCLGEHEFENYAARSVGRIISAVRRKYPN-AKFISFAKGAGYMLKNYRR 258
V+Q+F++ A + + + +A + +I + V+ + F+KG Y +
Sbjct: 178 QVLQVFESVAAESVTQKHYFEFAFPYLEQIAARVKDACGETVPIVCFSKGTPYAYEALA- 236
Query: 259 LTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPF 317
T +++ +DW + ++ + +QGN+DP + +++ V A+L+ G+ +
Sbjct: 237 TTKYDSLQVDWQSDVYQVRDIVDGKLSLQGNMDPCAIYASPEIIKSNVRAMLESFGTQNY 296
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ NLGHG P ++P +V VK+V+ +
Sbjct: 297 VANLGHGCFPDMEPSHVDTFVKSVQELSL 325
>gi|269958334|ref|YP_003328121.1| uroporphyrinogen decarboxylase [Anaplasma centrale str. Israel]
gi|269848163|gb|ACZ48807.1| uroporphyrinogen decarboxylase [Anaplasma centrale str. Israel]
Length = 346
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 135/352 (38%), Positives = 203/352 (57%), Gaps = 17/352 (4%)
Query: 2 NERKQKIL-EVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
++++ ++L VL + PIW MRQAGRYLPEY ++ F+NFLD CYTPE ++T
Sbjct: 4 SKKQGRVLERVLIEKKRQEKIPIWFMRQAGRYLPEYHEVMNNFENFLDACYTPEVVEKIT 63
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP++R++ DAAI+FSDI+V+ D+LG V F+ +GP++ + Q +I +
Sbjct: 64 LQPVKRFDIDAAIIFSDIMVVLDSLGYEVNFMRGQGPQIGKVIHQY------SISESITK 117
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV-----FAYQNS 174
L P+F+ I +RK L TLIGF G+PWT+ +Y + K+ + R A+++
Sbjct: 118 LQPVFEGIRRVRKSLDIDKTLIGFAGSPWTLLTYALGKE--KNFFKIRKDICLETAHKHP 175
Query: 175 R-AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
L++ ++D+++ YL QI +GVDVIQ+FD+ A L FE Y +I+ V
Sbjct: 176 ENKITELVNRITDLTSHYLAKQIESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFV 235
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMR 293
R ++PN I F GAG M K Y T +AI +D+S+P S+ E G +QGNLDP
Sbjct: 236 RVRHPNFPIIGFPMGAGVMYKTYLEKTGISAISVDYSIPTSWIKEHL-NGVIQGNLDPSL 294
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L + I++ LG P IFNLGHGI P+ ++V L+++VR
Sbjct: 295 LAYNQKASDSKSIKIVEELGDKPLIFNLGHGILPETPIQHVESLIRSVRKAS 346
>gi|114556208|ref|XP_001154711.1| PREDICTED: uroporphyrinogen decarboxylase isoform 6 [Pan
troglodytes]
Length = 325
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 101/295 (34%), Positives = 156/295 (52%), Gaps = 8/295 (2%)
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF 116
+T QP+RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++
Sbjct: 26 VTYQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVV 85
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L +FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A
Sbjct: 86 ASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQA 145
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LL L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 146 SHQLLRILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKAR 205
Query: 237 YPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
I FAK + L+ + +GLDW+V A E + K +QGNLD
Sbjct: 206 LREAGLAPVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLD 264
Query: 291 PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L + + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 265 PCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 319
>gi|229822487|ref|YP_002884013.1| uroporphyrinogen decarboxylase [Beutenbergia cavernae DSM 12333]
gi|229568400|gb|ACQ82251.1| uroporphyrinogen decarboxylase [Beutenbergia cavernae DSM 12333]
Length = 370
Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 107/349 (30%), Positives = 164/349 (46%), Gaps = 17/349 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+L G + P +W MRQAGR LPEYR R L+ C TPE E+TLQP+R
Sbjct: 28 NSPLLAAYHGRPVG-PAVWFMRQAGRSLPEYRAARAGT-EMLEACLTPELAAEITLQPVR 85
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R+ DAAI FSDI+V G +V GP + +P+ I
Sbjct: 86 RHGVDAAIFFSDIVVPLALAGVDVHIEPGLGPVIAEPVRDATAARAL--AARAPGDAARI 143
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + +L LIGF GAP+T+A+Y++ G +DH R + + A++ LL +
Sbjct: 144 TEAVRLTVAEL-GATPLIGFAGAPFTLAAYLVEGRPSRDHLAARTMMHADPEAWDALLGW 202
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
++++S +L AQ+ AG +Q+FD+ AG LG ++ + R R + AV +
Sbjct: 203 VAEISGAFLRAQVMAGASAVQLFDSWAGSLGRADYAAHVQRYSARTLDAVADL--GVPMV 260
Query: 244 SFAKGAGYMLKNYRRL-------TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV 295
F G +L R T +G+D + L A L P+QGN+DP L
Sbjct: 261 HFGTGTSDLLDLLRDAIPAGSPGTGPAVVGVDHRIGLDEANARLGGATPLQGNIDPAFLA 320
Query: 296 VGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V+ V ++ + + NLGHG+ P DP + +V+ V
Sbjct: 321 APWPVLEAHVRDVVARGTAAPGHVVNLGHGVPPDTDPGVLTRVVELVHG 369
>gi|88607724|ref|YP_504657.1| uroporphyrinogen decarboxylase [Anaplasma phagocytophilum HZ]
gi|88598787|gb|ABD44257.1| uroporphyrinogen decarboxylase [Anaplasma phagocytophilum HZ]
Length = 343
Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 127/345 (36%), Positives = 188/345 (54%), Gaps = 10/345 (2%)
Query: 2 NERKQKILEVLQ--GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
N++ +L + PIW MRQAGRYLPEY+++ ++FL+ CYTPE E+T
Sbjct: 7 NKKTITVLREILTTRRSTQRLPIWFMRQAGRYLPEYQKVMAHVQDFLEACYTPEIVEEVT 66
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQPI+R++ DAAI+FSDI+ + DALG V F GP+++ T +E+ L + L
Sbjct: 67 LQPIQRFDLDAAIIFSDIMTVPDALGFEVVFKRGYGPQINAKTRREVTL-----EWSLEK 121
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ P+ +SI +RK L + +LIGF G+PWTVA+Y++ K +
Sbjct: 122 VSPVLESIKRVRKSLSPNKSLIGFAGSPWTVATYILEQE--KKITDIFALHRSGDNSVAK 179
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L+D + + YL Q+ GVD++Q+FD++A L FE + RI+ +R+ +P+
Sbjct: 180 LIDEIVSFTTVYLKKQVEYGVDILQLFDSNASGLPVDLFETFIVEPTQRIVKELRKHHPS 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F KGAG + +Y T +A+ +D+S+P + + G VQGNLDP L +
Sbjct: 240 IPIIGFPKGAGVLYTHYALTTGISAVSVDYSIPSQWI-KNNISGVVQGNLDPFLLAYDVE 298
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ I+ L P IFNLGHGI P NV LV VRS
Sbjct: 299 GALKCAGEIIADLRDKPLIFNLGHGIIPPTPVDNVYRLVDFVRSF 343
>gi|239048271|ref|NP_001131512.2| hypothetical protein LOC100192850 [Zea mays]
gi|238908591|gb|ACF79949.2| unknown [Zea mays]
Length = 374
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 9/320 (2%)
Query: 5 KQKILEVLQGNV-INPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G + PP W+MRQAGRY+ EY+ + K+ +F + + VE+TLQP
Sbjct: 43 EPLLVRAARGEDGLPRPPAWMMRQAGRYMAEYQALAKRHPSFRERSENTDLIVEITLQPW 102
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
R + D ILFSDIL A+G +++GP + P+ ++E IDL + L
Sbjct: 103 RAFAPDGVILFSDILTPLPAIGVPFDISDSKGPVIQSPVRSKEQVRELVPIDLDM--LQF 160
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +S+ ILR ++ L+GF GAPWT+A+Y++ GG + + + LL
Sbjct: 161 VGESLKILRNEIDGKAALLGFVGAPWTIATYIVEGGMTNTYTNIKSMCHTAPDVLKGLLS 220
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ ++Y+I Q+++ IQIFD+ G L H +E ++ + +I+S ++++ PN
Sbjct: 221 HLAQAISDYIIYQVNSRAQCIQIFDSWGGQLPPHVWEQWSKPYIKQIVSRIKKECPNVPL 280
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVM 301
+ + G G +L+ + T + IGLDW+V + L VQGN+DP L V+
Sbjct: 281 VLYINGNGGLLERMKN-TGVDVIGLDWTVDMTDGRRRLGNGISVQGNVDPAFLFSPLPVL 339
Query: 302 IDGVNAILDVLGSGPFIFNL 321
D ++ ++ F FNL
Sbjct: 340 TDEIHRLVKA---QRFPFNL 356
>gi|256253976|ref|ZP_05459512.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|261221116|ref|ZP_05935397.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|260919700|gb|EEX86353.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 273
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 147/273 (53%), Positives = 193/273 (70%), Gaps = 2/273 (0%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+K+L+V+ G + PPPIW+MRQAGRYLPEYR+ RKK +FLD+CY+P+ VE+TLQPIR
Sbjct: 2 NRKVLKVIDGETVFPPPIWMMRQAGRYLPEYRETRKKAGSFLDLCYSPDLAVEVTLQPIR 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
R+ FDAAILFSDILV+ ALGR++RF E +GP M PI EI+ L + L P++
Sbjct: 62 RFGFDAAILFSDILVVPHALGRDLRFEEGKGPLMTPIDADEIFWL--ETEGVAKRLEPVY 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ ++R++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY+ AF LL+ L
Sbjct: 120 ETVRLVREQLPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYRFPEAFEKLLNDL 179
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+DVSAEYLI Q+ AG D +QIFD+ +G L E FE + R V RI+ VR YP A+ I
Sbjct: 180 ADVSAEYLIEQLGAGADAVQIFDSWSGVLDEDCFERFCIRPVARIVQKVRAVYPQARIIG 239
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL 277
F KGAG + YR T + +GLDWSVPLSFA
Sbjct: 240 FPKGAGMLYAGYREKTGVDMLGLDWSVPLSFAA 272
>gi|172044644|sp|Q2IPY2|DCUP_ANADE RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 335 bits (859), Expect = 7e-90, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 3 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-------DPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + +
Sbjct: 62 FGFDAAILFSDILVHLPAMGLDLTFEKGEKGKGDGGPKIGNPVRTRADVDALR-VPVPKK 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y +
Sbjct: 121 DLPYVLDGVRAIRTALADRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPATAH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR+
Sbjct: 180 ALFEKLTQAAIVQIEEQVAAGAQAAQIFESWLGELAREDLEEFSFPYLARIAEAVRKT-- 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A VQGN D L+
Sbjct: 238 GVPSIIFSTGTTAHLERMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLLLGPR 296
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V + +L G P +IFNLGHGI +NV +V V +
Sbjct: 297 EVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAVHAF 343
>gi|240138052|ref|YP_002962524.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens AM1]
gi|240008021|gb|ACS39247.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens AM1]
Length = 360
Score = 334 bits (858), Expect = 8e-90, Method: Composition-based stats.
Identities = 157/351 (44%), Positives = 214/351 (60%), Gaps = 12/351 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + Q L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE----HEFENYAARSVGRIISAVRRKYP 238
L V EYL+ Q+ AG DV+QIF++HAG L E + Y+ + R++ VR + P
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPESSDGDALKRYSLGPITRMVQGVRAQVP 251
Query: 239 NAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRL 294
+AK I FAKG+G L+ + R T ++A+G+DW V L+ V QGNL P L
Sbjct: 252 DAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTVTQGNLHPETL 309
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G + + V+AIL P IFNLGHGITPQ +V ++ +R +
Sbjct: 310 IEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGSR 360
>gi|50841794|ref|YP_055021.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium acnes
KPA171202]
gi|50839396|gb|AAT82063.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium acnes
KPA171202]
Length = 426
Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 174/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 74 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 132
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 133 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 190
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 191 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 250
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 251 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 310
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 311 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 367
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 368 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 425
>gi|218663122|ref|ZP_03519052.1| uroporphyrinogen decarboxylase [Rhizobium etli IE4771]
Length = 431
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 153/266 (57%), Positives = 199/266 (74%), Gaps = 2/266 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M++ ++KI+ VL G ++PPP+WLMRQAGRYLPEYR+ R K +FLD+CYTP+Y VE+TL
Sbjct: 1 MSDTRRKIMRVLDGESLSPPPLWLMRQAGRYLPEYRETRAKAGSFLDLCYTPDYAVEVTL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRRY FDAAILFSDILVI DA+ RNVRF E GP MDPI I LN + + YL
Sbjct: 61 QPIRRYGFDAAILFSDILVIPDAMKRNVRFTEGHGPEMDPIDEAGIGRLN--GEEVVAYL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
P+ +++ LR++LP+ TL+GFCGAPWTVA+YMI+G D R+FAY RAF L
Sbjct: 119 RPVLETVRRLREELPDETTLLGFCGAPWTVATYMIAGHGTPDQAPARLFAYNYPRAFEHL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L L+DVS++YL+AQI AG D +QIFD+ AG LGE EFE +A R V R+I++++ + P+A
Sbjct: 179 LMLLADVSSDYLVAQIDAGADAVQIFDSWAGVLGEREFETFAIRPVARMIASIKSRRPHA 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIG 266
+ I+FAKGAGY LK YR+ T ++AIG
Sbjct: 239 RIIAFAKGAGYQLKTYRQKTGADAIG 264
>gi|329891174|ref|ZP_08269517.1| uroporphyrinogen decarboxylase [Brevundimonas diminuta ATCC 11568]
gi|328846475|gb|EGF96039.1| uroporphyrinogen decarboxylase [Brevundimonas diminuta ATCC 11568]
Length = 325
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 120/323 (37%), Positives = 176/323 (54%), Gaps = 6/323 (1%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGRYLPEYR +R K +F+ C PE E TLQP+RR+ FDAAI+F+DIL+I
Sbjct: 2 WFMRQAGRYLPEYRALRAKAPDFIAFCLNPEMAAEATLQPMRRFGFDAAIVFADILLIPG 61
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
ALG+ V F EGPR+ + + + + L + Q++S++R +L LIG
Sbjct: 62 ALGQKVWFEAGEGPRLGALPS--VQSMADKAQQAGEALKAVGQTLSLVRAELEPERALIG 119
Query: 143 FCGAPWTVASYMISGG----FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
F GAPWTVA+YM+ G + R +AY N LLD L + +A YL Q A
Sbjct: 120 FAGAPWTVATYMLDGEARTIGKGERAAARTYAYTNPELVAGLLDVLVESTAHYLKMQQDA 179
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G V++IF++ A L + FE + ++++ R + F +G+ + + Y R
Sbjct: 180 GAQVLKIFESWAEGLPDDLFETLVLKPHQKLVARARELGVTVPLMGFPRGSAALAERYAR 239
Query: 259 LTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
D + LD + PL +Q P+QG LDP+ L G + V+ +++ G GP+I
Sbjct: 240 ECDVQGVALDTACPLDVGRRVQAIKPIQGALDPLLLRAGGDALDRRVDQLMEAWGQGPWI 299
Query: 319 FNLGHGITPQVDPKNVLDLVKTV 341
FNLGHGI P V +V ++K +
Sbjct: 300 FNLGHGILPDVPIAHVEQVLKRI 322
>gi|289705150|ref|ZP_06501554.1| uroporphyrinogen decarboxylase [Micrococcus luteus SK58]
gi|289558178|gb|EFD51465.1| uroporphyrinogen decarboxylase [Micrococcus luteus SK58]
Length = 407
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 104/361 (28%), Positives = 173/361 (47%), Gaps = 21/361 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ +L L+G + P+W MRQAGR LPEYRQ+R+ LD C P+ E+T+Q
Sbjct: 31 STAASPLLRALRGQRPDRHPVWFMRQAGRSLPEYRQVREGIG-MLDSCLMPDLVREITMQ 89
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYL 120
P+RR++ DAAI FSDI+V G +V GP + + T + P ++ L
Sbjct: 90 PVRRHDVDAAIFFSDIVVPLRLAGVDVEIQPGVGPVLGRAVRTADDVAALPVLEDAA--L 147
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
I ++++ +L LIGF GAP+T+A+YM+ G +DH R + + + L
Sbjct: 148 DVIREAVAATVAELGPR-PLIGFAGAPFTLAAYMVEGRPSRDHFGPRRMMHADPETWAAL 206
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY--- 237
D+ + VS ++L AQ+ +G Q+FD+ AG L ++ + ++ V
Sbjct: 207 ADWAATVSGQFLRAQLESGASAAQLFDSWAGSLSADDYLEHVQPHSRAALAHVADLAGPG 266
Query: 238 --PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL---------QKEGPVQ 286
A + F G G L + R + A+G+D + L+ A + P+Q
Sbjct: 267 VPDGAPLLHFGTGTGEFLHHMRD-AGATAVGVDHRLTLAEAHRRLSANPGPDGRGAVPLQ 325
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GN+DP L +V+ V ++ + + NL HG+ P+ D + +V+ + S
Sbjct: 326 GNIDPALLAAPWEVLEAHVRDVVASGAVAPGHVVNLAHGVPPETDAAVLTRVVELIHSLP 385
Query: 346 I 346
+
Sbjct: 386 V 386
>gi|329847381|ref|ZP_08262409.1| uroporphyrinogen decarboxylase [Asticcacaulis biprosthecum C19]
gi|328842444|gb|EGF92013.1| uroporphyrinogen decarboxylase [Asticcacaulis biprosthecum C19]
Length = 342
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 130/343 (37%), Positives = 185/343 (53%), Gaps = 2/343 (0%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M K ++ VL G + PPP+W MRQAGRYLPEYR +R F+D C PE E TL
Sbjct: 1 MQAGKASLIRVLGGETVTPPPVWFMRQAGRYLPEYRALRATTSGFVDFCLNPEKAAEATL 60
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QPIRR+ FDAAILFSDIL+I ALG+++ F EGP + + + + + L
Sbjct: 61 QPIRRFGFDAAILFSDILMIPLALGQDLTFAAGEGPVLGELPS--LEAMRDKAPFAGEAL 118
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ ++ L TLIGFCG PWTV +YM++G D R F Y + L
Sbjct: 119 KNVGETVARVKAGLTEATTLIGFCGGPWTVMTYMLNGRKANDRSLIRAFVYDDPTTVLSL 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D + + SA+YL Q G V++IF++ A + F+ + R+I VR
Sbjct: 179 IDIVIEASAQYLKVQADQGAQVLKIFESWAEGFPDPYFDLLVTQPHIRLIHRVRELGVTL 238
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQV 300
I F +GA +Y + A+ L + PL+ +ELQK P+QG LDP+ L G
Sbjct: 239 PIIGFPRGAEARCLDYAQAVTIEAMALGTATPLALGIELQKIRPIQGALDPVVLRSGGAA 298
Query: 301 MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ ++ IL+ G GP IFNLGHGI P +V +K +RS
Sbjct: 299 LDAAIDRILEAWGQGPLIFNLGHGIFPDTPIAHVEQALKRIRS 341
>gi|86157515|ref|YP_464300.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774026|gb|ABC80863.1| uroporphyrinogen decarboxylase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 350
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 104/347 (29%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ L + ++ P+W+MRQAGRY P YR +R+K +FL++C +PE ++T+ PI
Sbjct: 7 HRFLAACRREPVDRVPVWMMRQAGRYQPSYRAVRQKV-SFLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-------DPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E + +P+ T+ + +
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLTFEKGEKGKGDGGPKIGNPVRTRADVDALR-VPVPKK 124
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y +
Sbjct: 125 DLPYVLDGVRAIRTALADRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPATAH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + Q+ AG QIF++ G L + E ++ + RI AVR+
Sbjct: 184 ALFEKLTQAAIVQIEEQVAAGAQAAQIFESWLGELAREDLEEFSFPYLARIAEAVRKT-- 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A VQGN D L+
Sbjct: 242 GVPSIIFSTGTTAHLERMAKL-GYDVVSVDWRIPIDEARARLPGVAVQGNYDSTLLLGPR 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V + +L G P +IFNLGHGI +NV +V V +
Sbjct: 301 EVAVARAQQLLRAAGPTPGYIFNLGHGIQVGTPTENVKAVVDAVHAF 347
>gi|328908099|gb|EGG27858.1| uroporphyrinogen decarboxylase, HemE [Propionibacterium sp. P08]
Length = 401
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 109/358 (30%), Positives = 174/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ RK LD C PE
Sbjct: 49 MTETTTFTANSSLLQAMTGHRPAVTPVWFMRQAGRSLPEYREARKGT-TMLDSCLNPELA 107
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 108 AEITCQPVRRHHVDGAVLYSDIMVPLALAGTGVRIEPGVGPVLDEPVRTASD--VDRITQ 165
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
I ++ ++ +L + LIGF GAP+T+++Y++ G +DH R + +
Sbjct: 166 RNAGDSSVIEEAARLVVAELGDTTPLIGFAGAPFTISAYLVEGSPSRDHLSARAMMHSDP 225
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+A+ L+++++D+ A +L AQ+ G IQ+FD+ AG L ++ A R ++ V
Sbjct: 226 QAWARLMEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLSATDYRASVAPFSQRALANVD 285
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALELQ----KEGPVQ 286
N + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 286 ---LNTPVVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSEMEMPVQ 342
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 343 GNIDPALLFAGWEPLETATREIVTAGRQAPGHVVNLGHGVPSSTDPDVLTRLVELVHS 400
>gi|323454186|gb|EGB10056.1| hypothetical protein AURANDRAFT_71143 [Aureococcus anophagefferens]
Length = 388
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 12/349 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ +G + P+WLMRQAGRY+ ++R+ K F + +P+ EL+LQ R
Sbjct: 39 DLLVRAARGEDVERTPVWLMRQAGRYMADFRKYSDKIP-FRERSESPDIATELSLQCWRA 97
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY-----L 120
+ D I+FSDIL ALG + V+ +GP + T + + ++ + L
Sbjct: 98 FGVDGVIMFSDILTPLPALGVDFDVVKGKGPLIT-DTLGDAKRIAAFVEACGGFDPGAQL 156
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ LRK+ +L+GF GAPWT+ +Y GG + + + + +
Sbjct: 157 PFVGETLRNLRKETEGKTSLVGFVGAPWTLCAYATEGGASRHALKIKALMHDEPALAHAA 216
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD ++D A Y I QI G ++Q+F++ A L +F ++ R+ +AVR +P
Sbjct: 217 LDAMADAVAAYAIHQIDEGAQMVQVFESWAHQLNPADFAAFSKPYALRVAAAVREAHPGV 276
Query: 241 KFISFAKGAGYML---KNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVV 296
+ FA G L ++ +A+ LDW+V ++ A +L PVQGN+DP L+
Sbjct: 277 PVLFFANGGSSYLGLQRDMAGDAHYSALSLDWAVDMADARAQLGPSVPVQGNVDPSLLLG 336
Query: 297 GNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ D V +D G G I NLGHG+ NV V R
Sbjct: 337 SVADIDDAVKKCIDGAGGPGKHILNLGHGVLQPTPEANVAAFVDAARKH 385
>gi|171769477|sp|A7H9E0|DCUP_ANADF RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
Length = 346
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LE + ++ P+W+MRQAGRY P YR +R FL++C +PE ++T+ PI
Sbjct: 3 HRFLEACRKQPVDRLPVWMMRQAGRYQPSYRAVRANVG-FLELCRSPELIAQVTVAPIDE 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGP-------RMDPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E +P+ T+ +
Sbjct: 62 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALK-VPAPKK 120
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y R +
Sbjct: 121 DLPYVLDGVRAIRAALRDRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPRTAH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + QI AG QIF++ G L + E +A + RI AV+R
Sbjct: 180 ALFEKLTQAAIVQIEEQIAAGAQAAQIFESWLGELDRADLEEFAFPYLARIAEAVKRT-- 237
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A +QGN+D L+
Sbjct: 238 GVPSIFFSTGTTAHLEPISKL-GYDVVSVDWRIPIDEARRRAPGVAIQGNMDSTVLLGPK 296
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V ++ +I+ G P +IFNLGHGI P + V +V V +
Sbjct: 297 EVAVERALSIVRAAGREPGYIFNLGHGIQPGTPTETVKAVVDAVHAF 343
>gi|114556204|ref|XP_001154358.1| PREDICTED: uroporphyrinogen decarboxylase isoform 4 [Pan
troglodytes]
Length = 298
Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats.
Identities = 99/284 (34%), Positives = 151/284 (53%), Gaps = 8/284 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
L+D YL+ Q+ AG +Q+F++HAG LG F +A + + V+ +
Sbjct: 194 ILTDALVPYLVGQVAAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGL 253
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
I FAK + L+ + +GLDW+V A
Sbjct: 254 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARRRSG 296
>gi|257069783|ref|YP_003156038.1| uroporphyrinogen decarboxylase [Brachybacterium faecium DSM 4810]
gi|256560601|gb|ACU86448.1| uroporphyrinogen decarboxylase [Brachybacterium faecium DSM 4810]
Length = 346
Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 9/341 (2%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
+L+ L+G P +W MRQAGR LPEYR +R+ LD C PE E+T+QP+RR+
Sbjct: 6 LLQELRGVRAATPSVWFMRQAGRSLPEYRSLREGT-TMLDSCVRPEMAAEITVQPVRRHR 64
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQ-EIYLLNPNIDLFLNYLLPIFQ 125
DA I FSDI+V A G V GP D P+ T+ ++ L P D + L PI +
Sbjct: 65 VDAGIFFSDIVVPARQAGLGVEIQPGVGPVFDHPVRTEADVDALPPLGDDYEAALDPIRE 124
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ + +L LIGF GAP+TVASYM+ GG +DH + R + L +++
Sbjct: 125 AVRLTVAEL-GTTPLIGFAGAPFTVASYMVEGGPSRDHLRTRALMRSQPEVWARLASWVA 183
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++S +L AQ+ AG +Q+FD+ G L ++ + + ++ V I F
Sbjct: 184 ELSGRFLRAQVLAGASAVQLFDSWVGALSVEQYLAHVQQHSADALAHVTAL--PVPRIHF 241
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDG 304
GA ++L + A+G+D + L ALEL +G PVQGN+DP L Q
Sbjct: 242 GVGAAHLLPQMFE-AGATAMGVDHRLRLDHALELLPQGTPVQGNIDPAVLFTSEQARFAE 300
Query: 305 VNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + + NLGHG+ P DP+ + DLV + ++
Sbjct: 301 AREVLAAGAAASGHVVNLGHGVPPTADPQVLTDLVSFLHAQ 341
>gi|153003995|ref|YP_001378320.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. Fw109-5]
gi|152027568|gb|ABS25336.1| uroporphyrinogen decarboxylase [Anaeromyxobacter sp. Fw109-5]
Length = 350
Score = 332 bits (851), Expect = 5e-89, Method: Composition-based stats.
Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 14/347 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ LE + ++ P+W+MRQAGRY P YR +R FL++C +PE ++T+ PI
Sbjct: 7 HRFLEACRKQPVDRLPVWMMRQAGRYQPSYRAVRANVG-FLELCRSPELIAQVTVAPIDE 65
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGP-------RMDPITTQEIYLLNPNIDLFLN 118
+ FDAAILFSDILV A+G ++ F + E +P+ T+ +
Sbjct: 66 FGFDAAILFSDILVHLPAMGLDLSFEKGEKGKGDGGPKIANPVRTRADVDALK-VPAPKK 124
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + + +R L + + LIGF G P+TVASY + G + + + Y R +
Sbjct: 125 DLPYVLDGVRAIRAALRDRVPLIGFVGGPFTVASYAVEG-GSQGFTRLKTMLYAEPRTAH 183
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L + L+ + + QI AG QIF++ G L + E +A + RI AV+R
Sbjct: 184 ALFEKLTQAAIVQIEEQIAAGAQAAQIFESWLGELDRADLEEFAFPYLARIAEAVKRT-- 241
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
I F+ G L+ +L + + +DW +P+ A +QGN+D L+
Sbjct: 242 GVPSIFFSTGTTAHLEPISKL-GYDVVSVDWRIPIDEARRRAPGVAIQGNMDSTVLLGPK 300
Query: 299 QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V ++ +I+ G P +IFNLGHGI P + V +V V +
Sbjct: 301 EVAVERALSIVRAAGREPGYIFNLGHGIQPGTPTETVKAVVDAVHAF 347
>gi|325115608|emb|CBZ51163.1| uroporphyrinogen decarboxylase,related [Neospora caninum Liverpool]
Length = 651
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 112/367 (30%), Positives = 176/367 (47%), Gaps = 46/367 (12%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN-FDAAILFSDIL 78
P+W+MRQAGRYLPE+R +R++ FL++C P ELTLQP R+ DA I+FSDIL
Sbjct: 275 TPVWMMRQAGRYLPEFRNMRRQHG-FLEVCRDPRLASELTLQPYHRFPQLDAVIIFSDIL 333
Query: 79 VIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
VI +A+G + E GPR P +++ L P+I+ L Y +F ++ + ++
Sbjct: 334 VIPEAMGMKLSMEEGVGPRFAWRIESPADIKKLT-LKPDIENTLGY---VFDAVYVTSQR 389
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L I LIGFCG P T+ +YM+ GG K + + F Y+ A + LL +SD+ +YL+
Sbjct: 390 LAGGIPLIGFCGGPLTLLTYMVEGGGSKTWRRAKKFIYEEPEATHTLLQVISDICVDYLV 449
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK------ 247
Q AG V+Q+FDT+A ++ A + I V+ + P+ I+F K
Sbjct: 450 GQADAGAQVLQVFDTNASQFAADTYDEIGAPFLASIAERVKERRPHVTMIAFPKDRPSPV 509
Query: 248 -----------GAGYMLKNYRR---------LTDSNAIGLDWSVPLSFAL---------E 278
G+ + + +R + A G + S E
Sbjct: 510 FADSAFDVISLGSSAEIDSMQRRFSGRRETGKSGEAAEGAESRGTCSGEAGERRDRDNGE 569
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
+QGNLDP L + ++ G G I NLGHG+ P++ P++ +
Sbjct: 570 RADGKALQGNLDPQILYTDIATIKRETAKMIRRFGVGRHIANLGHGMEPEMSPEHAQAFI 629
Query: 339 KTVRSEK 345
++V+
Sbjct: 630 ESVKEAS 636
>gi|254797288|ref|YP_003082130.1| uroporphyrinogen decarboxylase [Neorickettsia risticii str.
Illinois]
gi|254590528|gb|ACT69890.1| uroporphyrinogen decarboxylase [Neorickettsia risticii str.
Illinois]
Length = 322
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 123/322 (38%), Positives = 177/322 (54%), Gaps = 11/322 (3%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGRYLPEY +I KK F MC +P+ E+TLQPIRR++ DAAI+FSDILV+
Sbjct: 9 WFMRQAGRYLPEYLEISKKM-TFFQMCESPKIASEITLQPIRRFDLDAAIIFSDILVLPR 67
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
ALG N+ ++ GP ++ I+ D+F + P +I+I RK LP + +LIG
Sbjct: 68 ALGCNIDIKKSIGPIIERISNPN----ELTHDVFEEKISPTLNAIAITRKSLPENKSLIG 123
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F G PWTVA Y+I GG+ K + + F + F ++ L+D + +YL Q+ G D
Sbjct: 124 FAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNEQVKHGADF 183
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
+QIF++ A +EFE + RI S++ + I F KGAG Y + T
Sbjct: 184 VQIFESFAWAASSNEFEEFIIGPTRRIASSI-----DVPVIGFPKGAGVSYLQYVKETSV 238
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ I D S+PL + ++ LQ +QGNLDP L + + I+D FIFNL
Sbjct: 239 DVISTDHSLPLDWIVDNLQTHAVIQGNLDPYLLAFNKKEALLQTERIIDAFSGKNFIFNL 298
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHGI + +V ++ +RS
Sbjct: 299 GHGIYKETPLSSVEAVLDFIRS 320
>gi|315106335|gb|EFT78311.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL030PA1]
Length = 353
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 174/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|313765240|gb|EFS36604.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL013PA1]
gi|313772846|gb|EFS38812.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL074PA1]
gi|313802781|gb|EFS43999.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA2]
gi|313810985|gb|EFS48699.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL083PA1]
gi|313815288|gb|EFS53002.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL059PA1]
gi|313828703|gb|EFS66417.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL063PA2]
gi|313831751|gb|EFS69465.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL007PA1]
gi|313834368|gb|EFS72082.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL056PA1]
gi|313840065|gb|EFS77779.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL086PA1]
gi|314916107|gb|EFS79938.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA4]
gi|314917028|gb|EFS80859.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA1]
gi|314921304|gb|EFS85135.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA3]
gi|314931034|gb|EFS94865.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL067PA1]
gi|314955014|gb|EFS99420.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL027PA1]
gi|314959053|gb|EFT03155.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA1]
gi|314964543|gb|EFT08643.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL082PA1]
gi|314969643|gb|EFT13741.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA1]
gi|314974709|gb|EFT18804.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL053PA1]
gi|314977095|gb|EFT21190.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL045PA1]
gi|314985505|gb|EFT29597.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA1]
gi|315078441|gb|EFT50472.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL053PA2]
gi|315082094|gb|EFT54070.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL078PA1]
gi|315097340|gb|EFT69316.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL038PA1]
gi|315099445|gb|EFT71421.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL059PA2]
gi|315102050|gb|EFT74026.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL046PA1]
gi|315110124|gb|EFT82100.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL030PA2]
gi|327331374|gb|EGE73113.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL096PA2]
gi|327447244|gb|EGE93898.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL043PA1]
gi|327449723|gb|EGE96377.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL043PA2]
gi|327454573|gb|EGF01228.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA3]
gi|327456645|gb|EGF03300.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL083PA2]
gi|328755628|gb|EGF69244.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA1]
gi|328756708|gb|EGF70324.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL025PA2]
gi|328761897|gb|EGF75407.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL099PA1]
Length = 353
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|313835647|gb|EFS73361.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA2]
gi|314928319|gb|EFS92150.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL044PA1]
gi|314970248|gb|EFT14346.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL037PA3]
Length = 353
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 109/358 (30%), Positives = 174/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ RK LD C PE
Sbjct: 1 MTETTTFTANSSLLQAMTGHRPAVTPVWFMRQAGRSLPEYREARKGT-TMLDSCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGTGVRIEPGVGPVLDEPVRTASD--VDRITQ 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
I ++ ++ +L + LIGF GAP+T+++Y++ G +DH R + +
Sbjct: 118 RNAGDSSVIEEAARLVVAELGDTTPLIGFAGAPFTISAYLVEGSPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+A+ L+++++D+ A +L AQ+ G IQ+FD+ AG L ++ A R ++ V
Sbjct: 178 QAWARLMEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLSATDYRASVAPFSQRALANVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALELQ----KEGPVQ 286
N + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---LNTPVVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSEMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLETATREIVTAGRQAPGHVVNLGHGVPSSTDPDVLTRLVELVHS 352
>gi|58699451|ref|ZP_00374193.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534031|gb|EAL58288.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 301
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 116/305 (38%), Positives = 169/305 (55%), Gaps = 7/305 (2%)
Query: 40 KKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD 99
+ NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP +
Sbjct: 4 ENMNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIK 63
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
P+ + + LPI +I +R +LP +LIGF G PWTVASY+I GG
Sbjct: 64 PVESPK---ELKGPQEIETKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGS 120
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFE 219
K + F +++ +++V+ YLI QI G DVIQ+FD++AG L E F+
Sbjct: 121 SKTFSKVLNF---YPSCLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFK 177
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
Y RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A
Sbjct: 178 EYVIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKAN 237
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
P+QGNLDP L I I+D PFIFNLGHG+ P +N+ LV
Sbjct: 238 L-NIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVN 296
Query: 340 TVRSE 344
V+S
Sbjct: 297 LVKSY 301
>gi|88608180|ref|YP_506832.1| uroporphyrinogen decarboxylase [Neorickettsia sennetsu str.
Miyayama]
gi|123491245|sp|Q2GCG4|DCUP_NEOSM RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|88600349|gb|ABD45817.1| uroporphyrinogen decarboxylase [Neorickettsia sennetsu str.
Miyayama]
Length = 324
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 123/322 (38%), Positives = 175/322 (54%), Gaps = 11/322 (3%)
Query: 23 WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIAD 82
W MRQAGRYLPEY +I K+ F MC +PE E+TLQPI+R++ DAAI+FSDILV+
Sbjct: 11 WFMRQAGRYLPEYLKISKEM-TFFQMCESPEIASEITLQPIKRFDLDAAIVFSDILVLPR 69
Query: 83 ALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
ALG N+ ++ GP ++ I D F + P +I+I RK LP + +LIG
Sbjct: 70 ALGCNIDIKKSTGPVIERINNPNWL----TYDAFEEKISPTLNTIAITRKSLPQNKSLIG 125
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F G PWTVA Y+I GG+ K + + F + F ++ L+D + +YL Q+ G D
Sbjct: 126 FAGGPWTVALYIIEGGWDKTFLRTKEFINKRYHEFKEIISILTDATIQYLNKQLKHGADF 185
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
IQIF++ A +EF+ + RI+S++ + I F KGAG Y + T
Sbjct: 186 IQIFESFAWAASSNEFKEFIVEPTRRIVSSI-----DVPVIGFPKGAGVSYLQYVKETSV 240
Query: 263 NAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
+ I D S+PL + A LQ VQGNLDP L + + I+D FIFNL
Sbjct: 241 DVISTDHSLPLDWIADNLQTHAVVQGNLDPYLLAFNKKEALLQTERIVDAFSEKNFIFNL 300
Query: 322 GHGITPQVDPKNVLDLVKTVRS 343
GHGI + +V ++ +R+
Sbjct: 301 GHGIYKETPLSSVEAVLDFIRA 322
>gi|239918011|ref|YP_002957569.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
gi|281415811|ref|ZP_06247553.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
gi|239839218|gb|ACS31015.1| uroporphyrinogen decarboxylase [Micrococcus luteus NCTC 2665]
Length = 407
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 21/357 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+L L+G + P+W MRQAGR LPEYR++R+ LD C P+ E+T+QP+RR
Sbjct: 35 SPLLRALRGQRPDRHPVWFMRQAGRSLPEYRRVREGIG-MLDSCLMPDLVREITMQPVRR 93
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAAI FSDI+V G +V GP + + T + P ++ L I
Sbjct: 94 HDVDAAIFFSDIVVPLRLAGVDVEIQPGVGPVLGQAVRTPDDVAALPVLEDAA--LDVIR 151
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++++ +L LIGF GAP+T+A+YM+ G +DH R + + + L +
Sbjct: 152 EAVAATVAELGPR-PLIGFAGAPFTLAAYMVEGRPSRDHFGPRRMMHADPETWAALAGWA 210
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PN 239
+ VS ++L AQ+ +G Q+FD+ AG L ++ + ++ V
Sbjct: 211 ATVSGQFLRAQLESGASAAQLFDSWAGSLSADDYLEHVQPHSTAALAHVADLAGPGVPDG 270
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL---------QKEGPVQGNLD 290
A + F G G L + R + A+G+D + L+ A + P+QGN+D
Sbjct: 271 APLLHFGTGTGEFLHHMRD-AGATAVGVDHRLTLAEAHRRLSANPGPDGRGAVPLQGNID 329
Query: 291 PMRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
P L +V+ V ++ + + NL HG+ P+ D + +V+ + S +
Sbjct: 330 PALLAAPWEVLEAHVRDVVASGAVAPGHVVNLAHGVPPETDAAVLTRVVELIHSLPV 386
>gi|295129871|ref|YP_003580534.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK137]
gi|291375822|gb|ADD99676.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK137]
Length = 354
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 2 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 61 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 118
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 119 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 178
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 179 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 238
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D L A E PVQ
Sbjct: 239 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQ 295
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 296 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|289424561|ref|ZP_06426344.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK187]
gi|289155258|gb|EFD03940.1| uroporphyrinogen decarboxylase [Propionibacterium acnes SK187]
gi|327334884|gb|EGE76595.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL097PA1]
Length = 354
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 174/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 2 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 61 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 118
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 119 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 178
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 179 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 238
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 239 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 295
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 296 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|256372593|ref|YP_003110417.1| uroporphyrinogen decarboxylase [Acidimicrobium ferrooxidans DSM
10331]
gi|256009177|gb|ACU54744.1| uroporphyrinogen decarboxylase [Acidimicrobium ferrooxidans DSM
10331]
Length = 356
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 9/345 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ + +L L + P+W MRQAGR LPEYR +R ++ L + PE +TLQ
Sbjct: 6 HSPEPALLAALARRPGHHVPVWFMRQAGRSLPEYRAVR-GVESILTVLEDPELAATITLQ 64
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ RY+ DAAIL+SDI+ A G V V GP DP L + L
Sbjct: 65 PVERYHVDAAILYSDIMAPLAAAGVGVDIVPGLGPTFDPPIRARSDLARLDR-FHPEALE 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ ++ P + LIGF G P+TVASY+I G +D+ + ++ F LL
Sbjct: 124 AMASTVRLVTAASP--VPLIGFAGGPFTVASYLIEGRPSRDYSATKRLMLADAGLFAALL 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L+D++A + Q+ AG +QIFD+ AG L F ++ AR + R+ + +
Sbjct: 182 ERLTDIAAASIAVQVEAGASAVQIFDSWAGALSGPAFRDHVARHLRRLAAVIGEL--GVP 239
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQV 300
I F+ G ++ + L +A+G+DW V L FA +QGNLDP ++ V
Sbjct: 240 SIYFSVGTAHLEADICEL-GFDAVGIDWRVDLEGFATRHGSRLALQGNLDPAYVLAPVDV 298
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
++ A+L P ++FNLGHG+ P+ DP + +V V E
Sbjct: 299 VLAEARAVLTASAPAPGYVFNLGHGVLPESDPDVLARVVDLVHDE 343
>gi|332674711|gb|AEE71527.1| uroporphyrinogen decarboxylase [Propionibacterium acnes 266]
Length = 366
Score = 329 bits (845), Expect = 3e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 14 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 72
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 73 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 130
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 131 RHVEDPSVIEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 190
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V
Sbjct: 191 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD 250
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 251 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 307
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 308 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 365
>gi|163850923|ref|YP_001638966.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens PA1]
gi|163662528|gb|ABY29895.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens PA1]
Length = 370
Score = 329 bits (843), Expect = 4e-88, Method: Composition-based stats.
Identities = 156/361 (43%), Positives = 213/361 (59%), Gaps = 22/361 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + Q L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE--------------HEFENYAARSVGR 228
L V EYL+ Q+ AG DV+QIF++HAG L + Y+ + R
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPALERHAGVLPESSDGDALKRYSLGPITR 251
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFALELQKEGPV 285
++ VR + P+AK I FAKG+G L+ + R T ++A+G+DW V L+ V
Sbjct: 252 MVQGVRAQVPDAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTV 309
Query: 286 -QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
QGNL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R
Sbjct: 310 TQGNLHPETLIEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGG 369
Query: 345 K 345
+
Sbjct: 370 R 370
>gi|309790866|ref|ZP_07685410.1| uroporphyrinogen decarboxylase [Oscillochloris trichoides DG6]
gi|308227153|gb|EFO80837.1| uroporphyrinogen decarboxylase [Oscillochloris trichoides DG6]
Length = 312
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 163/310 (52%), Gaps = 7/310 (2%)
Query: 38 IRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR 97
+R+++ FL M PE E+TLQP + ++ DAAI+F+DIL + LG + F + EGP
Sbjct: 1 MRERYG-FLQMVKIPEVAAEVTLQPAQAFDIDAAIIFADILPPLEGLGIELTFEKGEGPV 59
Query: 98 M-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS 156
+ +P+ + D +I I++++L I L GF GAP+T+ASY I
Sbjct: 60 IHNPVRSPADIAALKRCDPR-ETAAYTLDAIRIVQRELNGRIPLFGFSGAPFTLASYAIE 118
Query: 157 GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
GG +++ + + Y++ ++++ L++ L+ + ++YLIAQ+ AG +++QIFD+ AG L +
Sbjct: 119 GGGSREYRRTKQLMYRDPQSWHALMEKLNVLVSDYLIAQVEAGCNIVQIFDSWAGSLSPN 178
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF- 275
+F Y V +I+ VR + I F M + ++ IGLDW V L
Sbjct: 179 DFAEYVLPHVKTVIATVRAAT-DVPIIFFGTEMFGM-SSMLSDVGADVIGLDWRVQLDEG 236
Query: 276 ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNV 334
L + VQGNLDPM L + IL G P IFN+GHGI + +NV
Sbjct: 237 WAALGHKVAVQGNLDPMTLHAPWPEIERRAADILRRAGGRPGHIFNVGHGILTETPEENV 296
Query: 335 LDLVKTVRSE 344
LV V +
Sbjct: 297 GRLVDFVHNF 306
>gi|58696989|ref|ZP_00372469.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58536762|gb|EAL60012.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila simulans]
Length = 296
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 116/303 (38%), Positives = 168/303 (55%), Gaps = 7/303 (2%)
Query: 42 FKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI 101
NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+
Sbjct: 1 MNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPV 60
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
+ + LPI +I +R +LP +LIGF G PWTVASY+I GG K
Sbjct: 61 ESPK---ELKGPQEIETKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSK 117
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ F +++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y
Sbjct: 118 TFSKVLNF---YPSCLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEY 174
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A
Sbjct: 175 VIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKANL- 233
Query: 282 EGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
P+QGNLDP L I I+D PFIFNLGHG+ P +N+ LV V
Sbjct: 234 NIPLQGNLDPNLLAYNKTEAIKEAKRIIDCFRDLPFIFNLGHGVLPDTPVENIAALVNLV 293
Query: 342 RSE 344
+S
Sbjct: 294 KSY 296
>gi|313817303|gb|EFS55017.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL046PA2]
gi|313821949|gb|EFS59663.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA1]
gi|313824155|gb|EFS61869.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA2]
gi|314926609|gb|EFS90440.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL036PA3]
gi|314961326|gb|EFT05427.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA2]
gi|314987329|gb|EFT31420.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA2]
gi|314989128|gb|EFT33219.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL005PA3]
gi|315082763|gb|EFT54739.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL027PA2]
gi|315086122|gb|EFT58098.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL002PA3]
gi|328758362|gb|EGF71978.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL020PA1]
Length = 353
Score = 328 bits (842), Expect = 6e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|227876578|ref|ZP_03994688.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35243]
gi|307699914|ref|ZP_07636965.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris FB024-16]
gi|227842779|gb|EEJ52978.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35243]
gi|307614952|gb|EFN94170.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris FB024-16]
Length = 360
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 108/352 (30%), Positives = 173/352 (49%), Gaps = 19/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L G P+W MRQAGR LPEYR R L C TP+ E+TLQP+
Sbjct: 14 SNSPFRAALAGVRPAQTPVWFMRQAGRSLPEYRAARAGVG-MLTACTTPDLVAEITLQPV 72
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAA+ FSDI++ G + V+ GP +D P+ + + + + L ++
Sbjct: 73 RRHDVDAAVFFSDIVIPLYLCGVGIDMVDGIGPVLDSPVRS--VADVERLVGLEVSDWSV 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-------KDHGQNRVFAYQNSR 175
I + ++ R++L L+GF GAP+T+ASY+I G + + R F +
Sbjct: 131 IEDAAALGRRELAFEKVLLGFAGAPFTLASYLIESGQPGVSKVQRRACLRTREFMRCQPQ 190
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ L + + +S E+L AQI G + +Q+FD+ G L E E+ YA + A +
Sbjct: 191 TWAKLATWCARLSGEFLAAQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK- 249
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++FA A ++L+ D ++G D + L A E +QGNLDP L+
Sbjct: 250 ---GVNHVNFAVAASHLLEALGETADVVSVGTD--ISLDTAAARLPETVLQGNLDPELLI 304
Query: 296 VGN-QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + +L + P IFNLGHG+ P+ DP + +LV V + +
Sbjct: 305 QSDSEKIWSEADKVLQAGQAAPAHIFNLGHGVKPETDPGLLTELVARVHAWR 356
>gi|254560612|ref|YP_003067707.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens DM4]
gi|254267890|emb|CAX23756.1| uroporphyrinogen decarboxylase [Methylobacterium extorquens DM4]
Length = 370
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 156/361 (43%), Positives = 213/361 (59%), Gaps = 22/361 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +L VL G I+PPP W+MRQAGRYLPEYR R + +FLD+CY P + E+TLQPIR
Sbjct: 12 ERPVLRVLSGEAISPPPAWMMRQAGRYLPEYRATRAEAGSFLDLCYNPAFATEVTLQPIR 71
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYLLP 122
R+ F+A+ILFSDILVI ALG++VRFVE EGPR+D + Q L ++L P
Sbjct: 72 RFGFEASILFSDILVIPHALGQDVRFVEGEGPRLDALEGRAQFERLREAGDPAIFSHLAP 131
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F+++ +R LP+ TL+GFCGAPWTVASYMI G D R A + + LLD
Sbjct: 132 VFEAVERIRGALPHETTLLGFCGAPWTVASYMIGGRGTVDLAPARALAAADPALLDALLD 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE--------------HEFENYAARSVGR 228
L V EYL+ Q+ AG DV+QIF++HAG L + Y+ + R
Sbjct: 192 RLVAVQTEYLVRQLRAGADVVQIFESHAGVLPALERHAGVLPESSDGDALKRYSLGPITR 251
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFALELQKEGPV 285
++ VR + P+AK I FAKG+G L+ + R T ++A+G+DW V L+ V
Sbjct: 252 MVQGVRAQVPDAKIIVFAKGSG--LEGHARVVPETGASAVGVDWGVDLAALRARVPASTV 309
Query: 286 -QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
QGNL P L+ G + + V+AIL P IFNLGHGITPQ +V ++ +R
Sbjct: 310 TQGNLHPETLIEGGRALDAAVDAILAATEGLPHIFNLGHGITPQTPIAHVEQMLARLRGG 369
Query: 345 K 345
+
Sbjct: 370 R 370
>gi|313814510|gb|EFS52224.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL025PA1]
gi|314922349|gb|EFS86180.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL001PA1]
gi|314965340|gb|EFT09439.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL082PA2]
gi|315094184|gb|EFT66160.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL060PA1]
gi|315104840|gb|EFT76816.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL050PA2]
gi|327329285|gb|EGE71045.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL103PA1]
Length = 366
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 110/358 (30%), Positives = 176/358 (49%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 14 MTETTTFTADSPLLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 72
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 73 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 130
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 131 RHVEDPSAIEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 190
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V
Sbjct: 191 QTWARLMEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD 250
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 251 ---PNIPVVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 307
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 308 GNIDPALLFAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 365
>gi|313806436|gb|EFS44943.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL087PA2]
gi|313826522|gb|EFS64236.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL063PA1]
gi|314980330|gb|EFT24424.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL072PA2]
gi|315087706|gb|EFT59682.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL072PA1]
gi|327333361|gb|EGE75081.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL096PA3]
Length = 353
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|306817533|ref|ZP_07451276.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35239]
gi|304649575|gb|EFM46857.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris ATCC 35239]
Length = 360
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 108/352 (30%), Positives = 173/352 (49%), Gaps = 19/352 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L G P+W MRQAGR LPEYR R L C TP+ E+TLQP+
Sbjct: 14 SNSPFRAALAGVRPAQTPVWFMRQAGRSLPEYRAARAGVG-MLTACTTPDLVAEITLQPV 72
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAA+ FSDI++ G + V+ GP +D P+ + + + + L ++
Sbjct: 73 RRHDVDAAVFFSDIVIPLYLCGVGIDMVDGIGPVLDSPVRS--VADVERLVGLEVSDWSV 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-------KDHGQNRVFAYQNSR 175
I + ++ R++L L+GF GAP+T+ASY+I G + + R F +
Sbjct: 131 IEDAAALGRRELAFEKVLLGFAGAPFTLASYLIESGQPGVSKAQRRACLRTREFMRCQPQ 190
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
A+ L + + +S E+L AQI G + +Q+FD+ G L E E+ YA + A +
Sbjct: 191 AWAKLATWCARLSGEFLAAQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK- 249
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++FA A ++L+ D ++G D + L A +QGNLDP L+
Sbjct: 250 ---GVNHVNFAVAASHLLEALGETADVVSVGTD--ISLKAAAARLPGKVLQGNLDPELLI 304
Query: 296 VGN-QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + + +L + P IFNLGHG+ P+ DP + +LV V + +
Sbjct: 305 QSDSEKIWSEADKVLQAGQAAPAHIFNLGHGVKPETDPGLLTELVARVHAWQ 356
>gi|313793131|gb|EFS41198.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA1]
gi|327457078|gb|EGF03733.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL092PA1]
Length = 353
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 107/358 (29%), Positives = 172/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEAARLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L ++ A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASDYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRTSLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + L + V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLAELVHS 352
>gi|289428892|ref|ZP_06430572.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J165]
gi|289157893|gb|EFD06116.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J165]
Length = 354
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 2 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 61 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 118
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 119 RHVEDPSVIEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 178
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V
Sbjct: 179 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSASNYRASVAPFSQRALATVD 238
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 239 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 295
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 296 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|314982573|gb|EFT26665.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA3]
gi|315091098|gb|EFT63074.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL110PA4]
Length = 353
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 110/358 (30%), Positives = 176/358 (49%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFTADSPLLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSAIEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---PNIPVVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|327445622|gb|EGE92276.1| uroporphyrinogen decarboxylase [Propionibacterium acnes HL013PA2]
Length = 353
Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats.
Identities = 108/358 (30%), Positives = 173/358 (48%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 1 MTETTTFMADSPLLQAMTGHRPTVTPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 59
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 60 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 117
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 118 RHVEDPSVIEEATRLAITELGDATPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 177
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G Q+FD+ AG L + A R ++ V
Sbjct: 178 QTWARLMEWVADLDAAFLAAQLRGGARAFQLFDSWAGSLSAGNYRASVAPFSQRALATVD 237
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 238 ---PNIPVVHFGINATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 294
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 295 GNIDPALLFAGWEPLESATRDIVAAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 352
>gi|282853363|ref|ZP_06262700.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J139]
gi|282582816|gb|EFB88196.1| uroporphyrinogen decarboxylase [Propionibacterium acnes J139]
Length = 354
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 110/358 (30%), Positives = 176/358 (49%), Gaps = 21/358 (5%)
Query: 1 MNER-----KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E +L+ + G+ P+W MRQAGR LPEYR+ R+ L+ C PE
Sbjct: 2 MTETTTFTADSPLLQAMTGHRPTVAPVWFMRQAGRSLPEYREAREGT-TMLESCLNPELA 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
E+T QP+RR++ D A+L+SDI+V G VR GP +D P+ T ++
Sbjct: 61 AEITCQPVRRHHVDGAVLYSDIMVPLALAGAEVRIEPGVGPVLDEPVRTASD--VDRITR 118
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ I ++ + +L + LIGF GAP+T+A+Y++ GG +DH R + +
Sbjct: 119 RHVEDPSAIEEAARLAITELGDVTPLIGFAGAPFTIAAYLVEGGPSRDHLSARAMMHSDP 178
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + L+++++D+ A +L AQ+ G IQ+FD+ AG LG ++ A R ++ V
Sbjct: 179 QTWARLMEWVADLDAAFLAAQLRGGARAIQLFDSWAGSLGASDYRASVAPFSQRALATVD 238
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTD----SNAIGLDWSVPLSFALEL----QKEGPVQ 286
PN + F A ++L + ++ +G+D + L A E PVQ
Sbjct: 239 ---PNIPVVHFGVNATHLLSEFAQVAATASRYPVLGVDHRISLDEACATLMVSGMEMPVQ 295
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+DP L G + + I+ P + NLGHG+ DP + LV+ V S
Sbjct: 296 GNIDPALLFAGWEPLETATRDIVTAGRQAPGHVVNLGHGVPSNTDPNVLTRLVELVHS 353
>gi|303274130|ref|XP_003056388.1| uroporphyrinogen decarboxylase [Micromonas pusilla CCMP1545]
gi|226462472|gb|EEH59764.1| uroporphyrinogen decarboxylase [Micromonas pusilla CCMP1545]
Length = 414
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 117/362 (32%), Positives = 181/362 (50%), Gaps = 19/362 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRK-KFKNFLDMCYTPEYTVELTL 60
+L +G ++ P+WL RQAGR+LPEY + +K K KNFL++ P+ E TL
Sbjct: 45 TPPNDSMLRAAKGEKVDRTPVWLFRQAGRHLPEYNEYKKVKNKNFLELLKDPKDVAECTL 104
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNY 119
QP+RRYN DA ILFSDILV+A+A+ NV G + +P+ E P+
Sbjct: 105 QPVRRYNVDAGILFSDILVVAEAMNINVEMPGGRGIVVVNPLNKPEDLERLPSSVDVHKK 164
Query: 120 LLPIFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L + ++I + +++ + LIGF APWT+ YM+ G K+ G ++ + +
Sbjct: 165 LGHVLEAIKEINRQIDKENLGVPLIGFSAAPWTLLYYMVGGSSKKNTGNGMLWLRDHPKE 224
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LLD L+ V +YL AQIHAGV ++Q+F+ + E F N+A + RI +R +
Sbjct: 225 SRLLLDSLTTVVIDYLDAQIHAGVHMVQVFEAMCEHIDEENFINFAYPCLERIAIEIRSR 284
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE---------GPVQG 287
+P+ + F + A Y L Y + + + +D ++ A + +E G +QG
Sbjct: 285 HPDTPILGFTRDAPYGLH-YLQHAGYDVMTVDTTMRGHDARAILQEEASARGVEPGQLQG 343
Query: 288 NLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
N DP L + + GV +L G I NLG G+T + DP V V V +
Sbjct: 344 NFDPALLHIDTGGDLKAIESGVKRMLTEFGPQKLIANLGAGLTGKEDPARVDFFVNCVHN 403
Query: 344 EK 345
Sbjct: 404 FS 405
>gi|28493702|ref|NP_787863.1| uroporphyrinogen decarboxylase [Tropheryma whipplei str. Twist]
gi|28572890|ref|NP_789670.1| uroporphyrinogen decarboxylase [Tropheryma whipplei TW08/27]
gi|45476890|sp|Q83FJ0|DCUP_TROWT RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|45476891|sp|Q83H92|DCUP_TROW8 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|28411023|emb|CAD67408.1| uroporphyrinogen decarboxylase [Tropheryma whipplei TW08/27]
gi|28476744|gb|AAO44832.1| uroporphyrinogen decarboxylase [Tropheryma whipplei str. Twist]
Length = 385
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 113/356 (31%), Positives = 174/356 (48%), Gaps = 21/356 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
I+E +G P+W MRQAGR LPEYR +R L+ C P+ E+TLQP+R
Sbjct: 32 NTGIMEAFRGTRPGCLPVWFMRQAGRSLPEYRAVR-GTNTLLEACLNPDLACEITLQPVR 90
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-IYLLNPNIDLFLNYLLP 122
RY+ DAAILFSDI+V G V + GP ++ PI T + + L +++
Sbjct: 91 RYSVDAAILFSDIVVPLKLAGVGVDILPGTGPVLNNPIDTPDRVNTLLAKTADSIDF--G 148
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I I+ + N I LIGF GAP+T+A YM+ GG K H + R + + + + ++
Sbjct: 149 IIAEITRHTVSVLNGIPLIGFAGAPYTLACYMVEGGPSKTHMKARAMMHGDKKTWQKVMM 208
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS----------- 231
+ +S ++L AQI +G +QIFD+ AG L ++ + A I
Sbjct: 209 LAARLSGQFLAAQITSGAQAVQIFDSWAGSLSRKDYVDNVAPFSKMTIDLACGIDGNSDL 268
Query: 232 --AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGN 288
+ +P + FA AG++L R + + + +D++ PL A EL + P+QGN
Sbjct: 269 SKTGKSLWPRVPVLHFAANAGHLLTAIRDI-GVSVMSVDYTKPLDEASELLDDSMPLQGN 327
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+DP L +V+ V I+ P + NLGHG+ P + +V S
Sbjct: 328 IDPAMLFAPWEVLKRHVLDIVQRASRAPSHVLNLGHGVPPDASCDQLARIVDLAHS 383
>gi|164658790|ref|XP_001730520.1| hypothetical protein MGL_2316 [Malassezia globosa CBS 7966]
gi|159104416|gb|EDP43306.1| hypothetical protein MGL_2316 [Malassezia globosa CBS 7966]
Length = 354
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 110/343 (32%), Positives = 174/343 (50%), Gaps = 37/343 (10%)
Query: 34 EYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAILFSDILVIADALGRNVRFV 91
E+R+IR++F F + C PE E+T+QP+RRY+ DAA++FSDILV+ A+G V V
Sbjct: 3 EFRKIREQF-EFFECCRDPEVASEITVQPVRRYDRLLDAAVIFSDILVVPQAMGMEVEMV 61
Query: 92 ENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTV 150
+GP P+ + + +D+ + L + +I + R KL + +IGFCGAPWT+
Sbjct: 62 PGKGPTFLHPLESPKDMARLKKVDIQKD-LGYVLDAIRLTRTKLAGRVPVIGFCGAPWTL 120
Query: 151 ASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
+YMI GG K + + + + LLD ++DV A +L+AQI AG ++Q+FD+ A
Sbjct: 121 MAYMIEGGGSKTWEKAKRWLFDYPEESKALLDRIADVCASFLVAQILAGAQLVQVFDSWA 180
Query: 211 GCLGEHEFENYAARSVGRIISAVR-----RKYPNAKFISFAKGA-GYMLKNYRRLTDSNA 264
G L ++F +A + I V+ + I +A+GA + L R + +
Sbjct: 181 GELTPYDFRTFALPYLRNIAVDVKDNLALKSVEPPPMIVYARGAVNHSLVEISR-SGYDV 239
Query: 265 IGLDWSVPLSFALE--------------------LQKEGPVQGNLDPMRLVVGNQVMIDG 304
+G+D +V ++A + Q +QGNLDP L +V+ D
Sbjct: 240 VGIDHTVEPAWARQCLAQAQSSNRKFSEVEVNKGAQHRIAIQGNLDPAILYARPEVIQDR 299
Query: 305 VNAILDV-----LGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V + G G I NLG GITP VDP ++ ++ V
Sbjct: 300 VRRMFQTKTGGFGGQGALICNLGQGITPGVDPDHLRVFLEAVH 342
>gi|114556202|ref|XP_001154191.1| PREDICTED: similar to Chain A, Gly156asp Mutant Of Human Urod,
Human Uroporphyrinogen Iii Decarboxylase isoform 3 [Pan
troglodytes]
Length = 313
Score = 325 bits (834), Expect = 5e-87, Method: Composition-based stats.
Identities = 102/349 (29%), Positives = 154/349 (44%), Gaps = 63/349 (18%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAP
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAP----------------------------------- 158
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+ + HAG Q+F+ +A + + V+ +
Sbjct: 159 -------ALQLFESHAGHLGPQLFN------------KFALPYIRDVAKQVKARLREAGL 199
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 200 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYA 258
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 259 SEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 307
>gi|297516331|ref|ZP_06934717.1| uroporphyrinogen decarboxylase [Escherichia coli OP50]
Length = 273
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 81 ADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT 139
DA+G + F EGPR P+T + P D + L + ++ +R++L +
Sbjct: 1 PDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-DELGYVMNAVRTIRRELKGEVP 59
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+A+YM+ GG K + Y + +A + LLD L+ YL AQI AG
Sbjct: 60 LIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAG 119
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYR 257
+ IFDT G L +++ ++ + +I+ + R+ F KG G L+
Sbjct: 120 AQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMA 179
Query: 258 RLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG- 315
T +A+GLDW+ ++ A + + +QGN+DP L + + V IL G G
Sbjct: 180 E-TGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGE 238
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+FNLGHGI V P++ V+ V
Sbjct: 239 GHVFNLGHGIHQDVPPEHAGVFVEAVH 265
>gi|255069999|ref|XP_002507081.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
gi|226522356|gb|ACO68339.1| uroporphyrinogen decarboxylase chloroplast precursor [Micromonas
sp. RCC299]
Length = 429
Score = 324 bits (832), Expect = 9e-87, Method: Composition-based stats.
Identities = 109/354 (30%), Positives = 169/354 (47%), Gaps = 17/354 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIR-KKFKNFLDMCYTPEYTVELTLQPI 63
++ +G + P+WL RQAGR+LPEY + + + KNFL++ P+ E+TLQPI
Sbjct: 55 NDIMIRAAKGQKVERTPVWLFRQAGRHLPEYMEYKNARGKNFLELLKDPKDVAEVTLQPI 114
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRYN DA ILFSDILV+A+A+ NV G + +P+ E P L
Sbjct: 115 RRYNIDAGILFSDILVVAEAMNINVEMPGGLGILVPNPLRNPEDLSRLPRSVNVEERLGH 174
Query: 123 IFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++I + +++ + LIGF APWT+ YM+ G K+ + ++
Sbjct: 175 VIEAIKEINRQIEAEALNVPLIGFSAAPWTLMYYMVGGSSKKNTDVGMQWLREHPNESQQ 234
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+ L+ V +YL AQI AGV ++Q+F+ + + F ++A S+ +I ++ ++P
Sbjct: 235 LLERLTTVVIDYLDAQIKAGVHMVQVFEAMCEHIDKDCFLSFAMPSLTKIAKELKARHPE 294
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-------QGNLDPM 292
+ FA+ A Y L + + + +D P A G V QGN DP
Sbjct: 295 IPLLVFARDAPYALP-LLQAAGYDVMTVDTVKPGDVARRELAIGAVGADPKQLQGNFDPA 353
Query: 293 RLVV----GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + V +L G +I NLG G+T DP V V V
Sbjct: 354 LLHAKTGSDEAAIEKAVRNMLISFGPQKYIANLGSGLTGLEDPSKVAFFVDCVH 407
>gi|255513655|gb|EET89920.1| uroporphyrinogen decarboxylase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 346
Score = 324 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 104/344 (30%), Positives = 171/344 (49%), Gaps = 7/344 (2%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
N + + G + P+W MRQAGRYLPEY +I+ +N LD+ P + E+T+
Sbjct: 3 NIKDSLFIRACYGKHVERHPVWFMRQAGRYLPEYSKIK-GARNVLDVQSDPLASSEITVL 61
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
P+ + DAAIL++DI++ A G VR EN GP MD + L
Sbjct: 62 PVDKLGVDAAILYADIMIPIRAAGLGVRIEENIGPVMDFAVGEPDDLAPLERFSCDRDAP 121
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++I ++KL + LIGF P+T+ SY++ G + + R + ++ +
Sbjct: 122 YVLENIVRTKEKLAGRVPLIGFAAGPFTLLSYLLEGRPSRTFDRCRAIIQDDPDLWSRFM 181
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D + ++ YL +Q+ GVD +QIFD+ AG L + + RI+ ++
Sbjct: 182 DMAASMTIRYLRSQVRTGVDAVQIFDSWAGFLEPEVYRKHVLEHTKRIVDEIKGI---VP 238
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQV 300
I F+ + ++++ R L D I + V L A L +QGNLDP V G
Sbjct: 239 IIHFSARSSGIMRDLREL-DCEVISIGPDVELKLARSALGNGKSLQGNLDPSMAVRGGAE 297
Query: 301 MIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
M+ ++ILD + G F+FNLGHG+ P+N++ +V+ V++
Sbjct: 298 MLARTDSILDEMDGVDGFVFNLGHGVAKDTPPENLMKIVERVKA 341
>gi|270488927|ref|ZP_06206001.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM D27]
gi|270337431|gb|EFA48208.1| uroporphyrinogen decarboxylase [Yersinia pestis KIM D27]
Length = 268
Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats.
Identities = 96/260 (36%), Positives = 139/260 (53%), Gaps = 5/260 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MNE + + L L ++ P+W+MRQAGRYLPEY+ R +F+ +C E E+T
Sbjct: 1 MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
+QP+RRY DAAILFSDIL I DA+G + F EGPR PIT + P D
Sbjct: 61 MQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPE-Q 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K + + Y + +
Sbjct: 120 ELGYVMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLH 179
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LLD L+D YL AQI AG + IFDT G L ++ ++ + +I+ + R+
Sbjct: 180 LLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENE 239
Query: 239 N--AKFISFAKGAGYMLKNY 256
F KG G K +
Sbjct: 240 GRRVPVTLFTKGGGRGWKRW 259
>gi|298243811|ref|ZP_06967618.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
gi|297556865|gb|EFH90729.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
Length = 357
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 8/341 (2%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ + + + P+W MRQAG YR++ +K+ + L + TPE + ++ L P++
Sbjct: 19 RFMAACERRQPDATPVWFMRQAGSTFGAYRKMLEKY-DVLTIAKTPELSSQVALFPVQEL 77
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAA+LF+DI++ + +G + GP + PI + +
Sbjct: 78 GVDAAVLFADIMLPIEDMGVELHLEPEVGPIIHHPIRDIQAVEALRTPARD-EVTPFVMD 136
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
I +L ++L +IG GAP+T+A Y+I G +D+ + Y ++ L++ +S
Sbjct: 137 GIRLLHRELEGKQAVIGIAGAPFTLACYLIEGRPSRDYHHAKTMMYSRPDLWHALMEKIS 196
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
V A+YL+AQ+ AG +V+Q+FD+ G L + + R+ AV+ A I F
Sbjct: 197 TVIADYLVAQVQAGANVVQVFDSWVGSLSPSVYRTFVLPYTQRVFQAVKAT--GAPAIHF 254
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDG 304
G +L + + +DW + L A E + E +QGNLDP ++ V+ +
Sbjct: 255 GTGTASLLNVMTEAGG-DVMSIDWRMDLDTAWERIGYERGIQGNLDPALMLTSWPVIEEN 313
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +L + P IFN GH + + LV+ V +
Sbjct: 314 MRDVLRRAANRPGHIFNFGHAMPIGSQADLLRRLVEAVHEQ 354
>gi|299115713|emb|CBN74278.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 429
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 111/359 (30%), Positives = 176/359 (49%), Gaps = 19/359 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIR-KKFKNFLDMCYTPEYTVELTLQP 62
+ ++ +G + P+WL RQAGR+LPEY + +K KNFL++ P+ E+T+QP
Sbjct: 57 KNDLLVRAAKGEKVERTPVWLFRQAGRHLPEYSAYKNEKGKNFLELLQDPDDVAEVTMQP 116
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLN-PNIDLFLNYL 120
IRRYN DAAILFSDILV+ ALG +V G + P+ + P + L
Sbjct: 117 IRRYNLDAAILFSDILVVPQALGIDVEMPGGVGILVPHPLKDPADFEARIPKEVDVKDKL 176
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q+++ ++++L + LIGF APWT+ YM+ G K+ + + A +
Sbjct: 177 SHVIQAVTRIKEELKGKVPLIGFSAAPWTLMFYMVGGSSKKNTDSGERWLQDHPEASAKM 236
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+D L+ V +Y+ AQ+ AG D++Q+F+ G + E F + A + RI S ++ + P
Sbjct: 237 MDLLTGVVIDYMAAQVEAGADILQVFEAMGGFISEDHFYDRAMPYLTRIASELKERCPGV 296
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP--------LSFALELQKE-GPVQGNLDP 291
+ FA+GA Y + + + +D A E +E VQGN DP
Sbjct: 297 PLMVFARGATYANVAL-QAAGYDVVTMDTETGRKATRDALEEAARETGREPAVVQGNFDP 355
Query: 292 MRLVVGNQVM-----IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
RL+ M + ++ LG I NLG G+ + DPK+V V +
Sbjct: 356 -RLLTDESSMSEINVREATETMMRELGPQKLIANLGEGLMGKEDPKSVAAFVDAIHDYS 413
>gi|304390441|ref|ZP_07372394.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304326197|gb|EFL93442.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length = 376
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 109/362 (30%), Positives = 176/362 (48%), Gaps = 31/362 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
I L G P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR
Sbjct: 15 SNIRAALNGIRPLTTPVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAA+ FSDI+V G ++ V + GP + P+T+ + + +L + I
Sbjct: 74 HHVDAAVFFSDIVVPLYLAGADINIVPDRGPVLRQPLTS--VAEVEKLTELEVTDWSVIE 131
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLD 182
Q+ + +R++LP L+GF GAP+T+ASY++ G + + + R F A+N L
Sbjct: 132 QAAAHVRRELPYEKVLLGFAGAPFTLASYLLEAGGPRRRECLETRAFVEAEPAAWNKLAT 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ + +S +++ AQI+ G + +Q+FD+ AG L E+ +A P A
Sbjct: 192 WCAKLSGQFMKAQINGGAEAVQLFDSWAGSLTASEYRQFALPYSSLAFQG----APGATH 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN---- 298
I F G ++++ + + +IG D + L A +QGNLDP LV
Sbjct: 248 IHFGVGTAHLIEAMGEIAEVVSIGSD--LGLDAAARRLPGKVLQGNLDPDLLVTAEQPAQ 305
Query: 299 --------------QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +L + P IFNLGHG+ P+ DP + +L + +
Sbjct: 306 TDSTPTDAKPTDHMEQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
Query: 344 EK 345
+
Sbjct: 366 WR 367
>gi|315654430|ref|ZP_07907338.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
gi|315491465|gb|EFU81082.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
Length = 376
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 107/362 (29%), Positives = 174/362 (48%), Gaps = 31/362 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
I L G P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR
Sbjct: 15 SNIRAALNGIRPLTTPVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAA+ FSDI+V G ++ V GP + P+T+ + + +L + I
Sbjct: 74 HHVDAAVFFSDIVVPLYLAGADINIVPGRGPVLRQPLTS--VAEIEKLTELEVTDWSVIE 131
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLD 182
Q+ + +R++LP L+GF GAP+T+ASY++ G + + + R F A+N L
Sbjct: 132 QAAAHVRRELPYEKVLLGFAGAPFTLASYLLEAGGPRRRECLETRAFIEAEPAAWNKLAT 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ + +S +++ AQI+ G + +Q+FD+ AG L E+ +A R A
Sbjct: 192 WCAKLSGQFMKAQINGGAEAVQLFDSWAGSLTASEYRQFALPYSSLAFQGAR----GATH 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN---- 298
+ F G ++++ + + +I D + L A +QGNLDP LV
Sbjct: 248 VHFGVGTAHLIEAMGEIAEVVSISSD--LGLDVAARRLPGKVLQGNLDPDLLVTAEQSAQ 305
Query: 299 --------------QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +L + P IFNLGHG+ P+ DP + +L + +
Sbjct: 306 TDSTSTDAKPTDHMEQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
Query: 344 EK 345
+
Sbjct: 366 WR 367
>gi|315657644|ref|ZP_07910526.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492116|gb|EFU81725.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 376
Score = 319 bits (818), Expect = 4e-85, Method: Composition-based stats.
Identities = 107/362 (29%), Positives = 174/362 (48%), Gaps = 31/362 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
I L G P+W MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR
Sbjct: 15 SNIRAALNGIRPLTTPVWFMRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRR 73
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ DAA+ FSDI+V G ++ V GP + P+T+ + + +L + I
Sbjct: 74 HHVDAAVFFSDIVVPLYLAGADINIVPGRGPVLRQPLTS--VAEIEKLTELEVTDWSVIE 131
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLD 182
Q+ + +R++LP L+GF GAP+T+ASY++ G + + + R F A+N L
Sbjct: 132 QAAAHVRRELPYEKVLLGFAGAPFTLASYLLEAGGPRRRECLETRAFIEAEPAAWNKLAT 191
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ + +S +++ AQI+ G + +Q+FD+ AG L E+ +A R A
Sbjct: 192 WCAKLSGQFMKAQINGGAEAVQLFDSWAGSLTASEYRQFALPYSSLAFQGAR----GATH 247
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN---- 298
+ F G ++++ + + +I D + L A +QGNLDP LV
Sbjct: 248 VHFGVGTAHLIEAMGEIAEVVSISSD--LGLDAAARRLPGKVLQGNLDPDLLVTAEQSAQ 305
Query: 299 --------------QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + +L + P IFNLGHG+ P+ DP + +L + +
Sbjct: 306 TDSTPTDAKPTDHMEQIWREAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHT 365
Query: 344 EK 345
+
Sbjct: 366 WR 367
>gi|218192783|gb|EEC75210.1| hypothetical protein OsI_11473 [Oryza sativa Indica Group]
Length = 365
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGR------YL---------------PEYRQIRK 40
+ ++ ++G + PP+WLMRQAG YL Y+ + +
Sbjct: 46 TAEEPLLVSAIKGRKVERPPVWLMRQAGSLFHGIQYLIASSSCLNRDKCPFFESYQLLCE 105
Query: 41 KFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MD 99
+ +F + + VE++LQP + + D ILFSDIL + V+ +GP D
Sbjct: 106 RHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIFD 165
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
P+ T + ++ + Q+++ILR+++ N ++GF GAP+T+ASY + GG
Sbjct: 166 PLRTAAAVNEVREF-VPEEWVPYVGQALNILREEVNNEAAVLGFVGAPFTLASYCVEGGS 224
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFE 219
K+ + + A+ + LL + A Y+ Q G +QIFD+ A L +FE
Sbjct: 225 SKNFSKIKKMAFSEPEILHNLLQKCTTSMANYIKYQADNGAQAVQIFDSWATELSPVDFE 284
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-E 278
++ + +I+ +V+ +P I +A G+G +L+ LT + + LDW+V ++
Sbjct: 285 EFSLPYLKQIVDSVKETHPELPLILYASGSGGLLERL-PLTGVDVVSLDWTVDMAEGRKR 343
Query: 279 LQKEGPVQGNLD 290
L VQGN D
Sbjct: 344 LGSNIAVQGNAD 355
>gi|73977144|ref|XP_861870.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 4 [Canis familiaris]
Length = 313
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 102/349 (29%), Positives = 151/349 (43%), Gaps = 63/349 (18%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+++ R ++F C +PE ELTLQP+
Sbjct: 15 KNDTFLRAAWGEDTDYTPVWCMRQAGRYLPEFKETRA-AQDFFSTCRSPEACCELTLQPL 73
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ + + + L
Sbjct: 74 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGY 133
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAP
Sbjct: 134 VFQAITLTRQRLAGRVPLIGFAGAP----------------------------------- 158
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+ + HAG Q+F+ +A V + V+ +
Sbjct: 159 -------ALQLFESHAGHLGPQLFN------------KFALPYVRDVAKRVKARVQEAGL 199
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV 296
I FAK + L+ + +GLDW+V A E + K +QGNLDP L
Sbjct: 200 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYA 258
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 259 SEEEIGRLVQKMLDDFGPQRYIANLGHGLYPDMDPEHVGAFVDAVHKYS 307
>gi|308803785|ref|XP_003079205.1| Uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
gi|116057660|emb|CAL53863.1| Uroporphyrinogen decarboxylase (ISS) [Ostreococcus tauri]
Length = 410
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 112/356 (31%), Positives = 177/356 (49%), Gaps = 19/356 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQ-IRKKFKNFLDMCYTPEYTVELTLQPI 63
++ +G + P+WL RQAGR+LPEY + R + KNFL++ P+ E T+QPI
Sbjct: 46 NDLMIRAARGERVERTPVWLFRQAGRHLPEYNEHKRARSKNFLELLADPKDVAECTMQPI 105
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RRYN DAAILFSDILVIA+AL V +G + +P+ E P + L
Sbjct: 106 RRYNLDAAILFSDILVIAEALNVEVEMPGGKGILVPNPLKGPEDMGRVPKSIDVNDKLSH 165
Query: 123 IFQSISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ S+ + ++ + LIGF APWT+ YM+ G K+ + ++ +
Sbjct: 166 VLASVREINAQIEKEGLGVPLIGFSAAPWTLMYYMVGGSSRKNTDSGMRWLKEHPKEAQE 225
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LLD L+ V +YL AQI GV ++Q+F+ + E F YA + +I + VRR++P+
Sbjct: 226 LLDILTTVVIDYLCAQIENGVHMVQVFEAMCEHITEESFYEYAMPCMAKIAAEVRRRHPD 285
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---------VQGNLD 290
+ FA+ A Y L ++ + I +D ++ + A ++ + VQGN D
Sbjct: 286 IPILGFARDAPYGLAALQQ-AGYDIITIDTAMDRTVARDVLRHDAEARGVEMSGVQGNFD 344
Query: 291 PMRLVVGN----QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P L + + V +L G I NLG G++ + D + V LV ++
Sbjct: 345 PSLLNKEGGSSFEGIEAEVTKMLTEFGPQKLIANLGAGLSGKEDVEKVAYLVDSIH 400
>gi|329945531|ref|ZP_08293269.1| putative uroporphyrinogen decarboxylase [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528776|gb|EGF55725.1| putative uroporphyrinogen decarboxylase [Actinomyces sp. oral taxon
170 str. F0386]
Length = 438
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 106/399 (26%), Positives = 167/399 (41%), Gaps = 58/399 (14%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTL 60
ILE L G P+W MRQAGR LPEYR +R++ L+ C PE E TL
Sbjct: 27 TATTPAILEALAGRRPERTPVWFMRQAGRSLPEYRALRERAGIPMLEACLDPELAAEATL 86
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQE-------------- 105
QP+RR+ DAA+ FSDI+V G VR E GP +D P+ +
Sbjct: 87 QPVRRHGVDAAVFFSDIMVPLRLAGVRVRIEEGVGPVLDAPVRSGREVTELVAHRFGDGP 146
Query: 106 --IYLLNPNIDLFLNYLLPIFQSISILRKKLP--------------------------NH 137
+ I +++ + +L
Sbjct: 147 GPETTAGTAGTAGAEGVAAIEEAVRRVVVELGSPQAPGVREGLSERARAGLEHSAGATGW 206
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
++ F GAP+T+A+Y++ G +DH R + +++ L+ + + ++ E++ Q+
Sbjct: 207 TPVLAFGGAPFTLAAYLVEGRPSRDHLAARTLMRADPGSWDRLMTWCARLTGEFIATQVR 266
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA-----KFISFAKGAGYM 252
AG Q+FD+ AG L + A + A R+ I F G +
Sbjct: 267 AGAAAAQLFDSWAGSLSPRAYRERVAPYSALALDAARQAVSPTTGEVPPLIHFGTGTARL 326
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQ-------KEGPVQGNLDPMRLVVGNQVMIDGV 305
L R+ ++AIG+D + L A+E PVQGNLDP L ++ + V
Sbjct: 327 LGLMRQ-AGADAIGVDERIELGEAIEALAQADPQAGACPVQGNLDPALLAAPWSLVAEEV 385
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+A+L + P + NLGHG+ P + + +V V
Sbjct: 386 DALLAAGRAAPGHVVNLGHGVPPDTEADVLTRIVARVHG 424
>gi|145494596|ref|XP_001433292.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400409|emb|CAK65895.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 105/348 (30%), Positives = 182/348 (52%), Gaps = 17/348 (4%)
Query: 5 KQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++++ Q + P+W+MRQAGRYLPEYR+I+ + +F C P E+TLQP
Sbjct: 39 NNRVVDAFQSFAPFDRAPVWMMRQAGRYLPEYREIKAEM-DFFATCQNPFIAAEITLQPT 97
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNYLL 121
++++ DAAI+FSDILV+ +G + E +GP + +P +T +I L+P +L
Sbjct: 98 KQFDIDAAIIFSDILVLPKMMGMEITIEEKKGPVIANPLVTPDDIQRLHPP---NPEHLE 154
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ ++ + R L LIGFCGAPWTV +YMI GG K + + + Y + +L
Sbjct: 155 HVYDALFLTRLALQGKCNLIGFCGAPWTVFAYMIEGGSSKLFSKVKKWLYLYTEGSLQVL 214
Query: 182 DFLSDVSAEYLIAQIH-AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ SA+YLI Q+ G V+QIFD+ AG + ++ + S+ + +++ P+
Sbjct: 215 ELLAKESAKYLINQVKQGGAQVVQIFDSWAGQIPAQDYIEFIIPSLRILFEDFKKECPDT 274
Query: 241 KFISFAKGAG-------YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
I F K ++ Y + LD +V ++ ++ +QGNL+P
Sbjct: 275 PLIMFPKDQNDKKVIVEFLKLIYNDKPLVDGFQLDSNVSDETLVKIIEANRTIQGNLEPG 334
Query: 293 RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
L ++ ++ +++ L + +I NL HG+TP + + V V+
Sbjct: 335 VLYGTPAIIKKRISQMIEKLQTTRRYIVNLAHGLTPDHEVEKVRLFVQ 382
>gi|262367398|gb|ACY63955.1| uroporphyrinogen decarboxylase [Yersinia pestis D182038]
Length = 273
Score = 315 bits (808), Expect = 6e-84, Method: Composition-based stats.
Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G + F EGPR PIT + P D L + ++ +R++L + LIGF
Sbjct: 4 GWGLYFETGEGPRFQSPITCRADVEKLPIPDPE-QELGYVMNAVRTIRRELAGSVPLIGF 62
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G+PWT+A+YM+ GG K + + Y + + LLD L+D YL AQI AG +
Sbjct: 63 SGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLHLLLDKLADSVILYLNAQIKAGAQSV 122
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTD 261
IFDT G L ++ ++ + +I+ + R+ F KG G L+ T
Sbjct: 123 MIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENEGRRVPVTLFTKGGGPWLEAMAA-TG 181
Query: 262 SNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIF 319
+A+GLDW+ ++ A + + +QGN+DP L + V+ IL G G +F
Sbjct: 182 CDALGLDWTTDIADARRRVGDKVALQGNMDPSVLYAPPARIEQEVSTILASFGQGEGHVF 241
Query: 320 NLGHGITPQVDPKNVLDLVKTVRSEK 345
NLGHGI V P + V V +
Sbjct: 242 NLGHGIHQDVPPAHAGAFVNAVHALS 267
>gi|145497837|ref|XP_001434907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402035|emb|CAK67510.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 107/357 (29%), Positives = 190/357 (53%), Gaps = 16/357 (4%)
Query: 3 ERKQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++L+ Q + PIW+MRQAGRYLPE+++I K ++F D C P E+TLQ
Sbjct: 37 QTNTRLLDAFQSFAQFDRAPIWMMRQAGRYLPEFKEIMKN-RDFFDACQDPFIAAEITLQ 95
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P++++ DAAI+FSDIL + A+G + + +GP + + + T + + D L
Sbjct: 96 PLKQFEIDAAIIFSDILTLPKAMGMEIVMDKEKGPIIKNKLETVDDINRIKSPD--PESL 153
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ ++ + R+ L TLIGFCGAP+TV SYM+ G K + + + YQ ++ +
Sbjct: 154 EHVYDALYLTRQALQGKQTLIGFCGAPFTVFSYMVEGETSKMFLKTKKWLYQYTQETRKV 213
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+D ++ SA+YLI Q+ G VIQIFD+ AG + ++ + S+ ++ +++ PN
Sbjct: 214 MDLIARESAQYLINQVKEGGAQVIQIFDSFAGQIPPIDYIEFVIPSLRILLEGFKQECPN 273
Query: 240 AKFISFAKGAGY-------MLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
I FAK + + LD +V ++ ++ + +QGNL+P
Sbjct: 274 TPLIMFAKDQNGVEVILAFLKMCLGETPLIDGFQLDSNVSDDVLIKIIESDRTIQGNLEP 333
Query: 292 MRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLV-KTVRSEKI 346
L Q++ V+ +++ L + +I NL HG+TP + + V + +++R K+
Sbjct: 334 GVLYGTQQIIKKRVSQMIEKLQTTRRYIMNLSHGLTPDHEVEKVRQFIQESIRQSKL 390
>gi|330722184|gb|EGH00081.1| Uroporphyrinogen III decarboxylase [gamma proteobacterium IMCC2047]
Length = 270
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 7/267 (2%)
Query: 84 LGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + F+ EGP+ + I T + ID + L + ++ +RK+L + LIG
Sbjct: 1 MGLGLYFITGEGPKFEKTIRTAKDVDAISVIDGEKD-LGYVMNAVRTIRKELNGRVPLIG 59
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F G+PWT+A+YMI GG ++ + F A + LLD L+D YL AQI AG
Sbjct: 60 FSGSPWTLATYMIEGGSTREFRHIKEFMLTQPEAMHELLDKLADSVISYLNAQILAGAQA 119
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLT 260
+QIFDT G L + ++ + +I + + R+ I F KG G L +
Sbjct: 120 VQIFDTWGGVLSGPLYREFSLNYMKKIAAGLLRENEGRRIPVIMFTKGGGQWLPDMAA-A 178
Query: 261 DSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFI 318
++ +GLDWS + A + + + +QGN+DP L + + V IL+ GSG +
Sbjct: 179 GADCLGLDWSTDIGMARQLVGDKVSLQGNMDPSMLFAKPERIRQEVAYILERFGSGNGHV 238
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
FNLGHGI+ DP++ V V
Sbjct: 239 FNLGHGISQFADPEHAKVFVDAVHELS 265
>gi|145509701|ref|XP_001440789.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408017|emb|CAK73392.1| unnamed protein product [Paramecium tetraurelia]
Length = 398
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 104/348 (29%), Positives = 183/348 (52%), Gaps = 17/348 (4%)
Query: 5 KQKILEVLQG-NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++++ Q + P+W+MRQAGRYLPEYR+I+ + +F C P E+TLQP
Sbjct: 39 NNRVVDAFQSFAPFDRAPVWMMRQAGRYLPEYREIKAEM-DFFATCQNPFIAAEITLQPT 97
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DP-ITTQEIYLLNPNIDLFLNYLL 121
++++ DAAI+FSDILV+ +G + E +GP + +P +T +I L+P +L
Sbjct: 98 KQFDIDAAIIFSDILVLPKMMGMEITIEEKKGPVIANPLVTPDDIQKLHPP---NPEHLE 154
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ ++ + R L LIGFCGAPWTV +YM+ GG K + + + Y + +L
Sbjct: 155 HVYDALFLTRLALQGKCNLIGFCGAPWTVFAYMVEGGSSKLFSKVKKWLYLYTEGSLQVL 214
Query: 182 DFLSDVSAEYLIAQIH-AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L+ SA+YLI Q+ G V+QIFD+ AG + ++ + S+ + +++ P+
Sbjct: 215 ELLAKESAKYLINQVKQGGAQVVQIFDSWAGQIPALDYIEFIIPSLRILFEDFKKECPDT 274
Query: 241 KFISFAKGAG-------YMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM 292
I F+K ++ Y + LD +V ++ ++ +QGNL+P
Sbjct: 275 PLIMFSKDQNDKKVIIEFLKLTYNDKPLVDGFQLDSNVSDETLIKIIEGNRTIQGNLEPG 334
Query: 293 RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
L ++ ++ +++ L + +I NL HG+TP + + V V+
Sbjct: 335 VLFGNPVIIKKRISQMIEKLQTTRRYIVNLAHGLTPDHEVEKVRLFVQ 382
>gi|145346940|ref|XP_001417939.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578167|gb|ABO96232.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 362
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 110/353 (31%), Positives = 174/353 (49%), Gaps = 19/353 (5%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRY 66
++ +G + P+WL RQAGR+LPEY + +K NFL++ P+ E+T+QPIRRY
Sbjct: 1 MIRAARGERVERTPVWLFRQAGRHLPEYNEYKKSTGKNFLELLADPKDVAEVTMQPIRRY 60
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQ 125
N DAAILFSDILVIA+AL V +G + +P+ E P L +
Sbjct: 61 NLDAAILFSDILVIAEALNIEVEMPGGKGILVPNPLRGPEDMHRVPESIDVNEKLAHVLA 120
Query: 126 SISILRKKLPNH---ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
S+ + ++ + LIGF APWT+ YM+ G K+ + ++ + LLD
Sbjct: 121 SVKEINVQIEKEGLGVPLIGFSAAPWTLMYYMVGGSSRKNTDAGMRWLKEHPKEAQKLLD 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+DV +YL AQ+ AGV ++Q+F+ + E F YA + +I +++++P
Sbjct: 181 ILTDVVIDYLDAQVKAGVHMVQVFEAMCEHITEESFYEYAMPCMEKIARELKKRHPTVPL 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP---------VQGNLDPMR 293
+ FA+ A Y L +R + I +D ++ A ++ VQGN DP
Sbjct: 241 LGFARDAPYGLAALQR-AGYDIITIDTAMDRVVARDVLSHDAETRGVQPSGVQGNFDPSL 299
Query: 294 LVVGN----QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L + + V +L+ G I NLG G+ + D + V LV ++
Sbjct: 300 LNKEGGSSFEGIEREVTQMLEDFGPQKLIANLGAGLGGKEDVEKVAYLVDSIH 352
>gi|238605566|ref|XP_002396486.1| hypothetical protein MPER_03269 [Moniliophthora perniciosa FA553]
gi|215469152|gb|EEB97416.1| hypothetical protein MPER_03269 [Moniliophthora perniciosa FA553]
Length = 280
Score = 311 bits (798), Expect = 9e-83, Method: Composition-based stats.
Identities = 90/279 (32%), Positives = 143/279 (51%), Gaps = 11/279 (3%)
Query: 76 DILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKL 134
DILV+ A+G V N GP+ DP+ T E + L +F++++ R +L
Sbjct: 1 DILVVPQAMGMEVLM--NPGPQFPDPLVTPEDVKKLREVVDVNKELGYVFEALTKTRMEL 58
Query: 135 PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA 194
+ LIGFCGAPWT+ +YMI GG K +++ + ++ LL ++DV ++L+
Sbjct: 59 NGEVPLIGFCGAPWTLLAYMIEGGGTKTFQKSKTWIFKYPEESKVLLMRIADVCVDFLVG 118
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PNAKFISFAKGA 249
Q+ AG ++Q+FD+ AG L H+F ++ ++ I VRR+ P FAKGA
Sbjct: 119 QVKAGAQLLQVFDSWAGELSPHDFNLFSFPTLQHISKGVRRRLREENIPEVPMTLFAKGA 178
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
Y L + + +GLDW + + A + + +QGN+DP L G + V +
Sbjct: 179 NYALSFLAENSGYDVLGLDWCIDPAEARRLVGTKVALQGNMDPNILYAGKPAIESAVKRV 238
Query: 309 LDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ G G +I NLGHGITP VDP++V + +
Sbjct: 239 CEGFRSGKGGWIANLGHGITPGVDPEDVRWFFECIHKYS 277
>gi|269977769|ref|ZP_06184729.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris 28-1]
gi|269934073|gb|EEZ90647.1| uroporphyrinogen decarboxylase [Mobiluncus mulieris 28-1]
Length = 402
Score = 310 bits (795), Expect = 2e-82, Method: Composition-based stats.
Identities = 109/394 (27%), Positives = 173/394 (43%), Gaps = 61/394 (15%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
L G P+W MRQAGR LPEYR R L C TP+ E+TLQP+
Sbjct: 14 SNSPFRAALAGVRPAQTPVWFMRQAGRSLPEYRAARAGVG-MLTACTTPDLVAEITLQPV 72
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
RR++ DAA+ FSDI++ G + V+ GP +D P+ + + + + L ++
Sbjct: 73 RRHDVDAAVFFSDIVIPLYLCGVGIDMVDGIGPVLDSPVRS--VADVERLVGLEVSDWSV 130
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-------KDHGQNRVFAYQNSR 175
I + ++ R++L L+GF GAP+T+ASY+I G + + R F +
Sbjct: 131 IEDAAALGRRELAFEKVLLGFAGAPFTLASYLIESGQPGVSKAQRRACRRTREFMRCQPQ 190
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
A+ L + + +S E+L AQI G + +Q+FD+ G L E E+ YA + A +
Sbjct: 191 AWAKLATWCARLSGEFLAAQIRGGAEAVQLFDSWVGVLTESEYREYAQPYTRMALEAAK- 249
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
++FA A ++L+ D ++G D + L A +QGNL+P LV
Sbjct: 250 ---GVNHVNFAVAASHLLEALGETADVVSVGTD--ISLKAAAARLPGKVLQGNLNPELLV 304
Query: 296 V-------------------------------------------GNQVMIDGVNAILDVL 312
+ + A+L+
Sbjct: 305 AATTGDSGMAPHEPESGTGGEGDGGTCGAPHGKTSSTSTIKMFSAKEKLWQDAEAVLEAG 364
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ P IFNLGHG+ P+ DP + +LV V + +
Sbjct: 365 RAAPAHIFNLGHGVIPETDPGLLTELVARVHAWQ 398
>gi|133723193|gb|ABO37843.1| uroporphyrinogen decarboxylase [Pseudomonas pseudoalcaligenes]
Length = 233
Score = 309 bits (792), Expect = 4e-82, Method: Composition-based stats.
Identities = 86/229 (37%), Positives = 129/229 (56%), Gaps = 1/229 (0%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ PIW+MRQAGRYLPEYR R K +F+ + PE E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPIWMMRQAGRYLPEYRATRAKAGDFVSLMKNPELACEVTIQPL 64
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
RY DAAILFSDIL I DA+G+ + F EGPR + + + I L
Sbjct: 65 DRYPQLDAAILFSDILTIPDAMGQGLFFETGEGPRFKKVVSSLADIEALPIPDPEKDLGY 124
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ +R++L + LIGF G+PWT+A+YM+ GG KD + + Y N +A + LL+
Sbjct: 125 VMDAVRTIRRELNGRVPLIGFSGSPWTLATYMVEGGSSKDFRKTKAMLYDNPQALHALLE 184
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
L+ YL QI AG +QIFD+ G L ++ ++ R + +I+
Sbjct: 185 KLAQSVTAYLNGQILAGAQAVQIFDSWGGALSAAAYQEFSLRYMKQIVD 233
>gi|16081446|ref|NP_393790.1| uroporphyrinogen decarboxylase [Thermoplasma acidophilum DSM 1728]
gi|13878468|sp|Q9HLB9|DCUP_THEAC RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|10639453|emb|CAC11455.1| uroporphyrinogen decarboxylase related protein [Thermoplasma
acidophilum]
Length = 333
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 99/339 (29%), Positives = 169/339 (49%), Gaps = 11/339 (3%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ ++G + P+W MRQAGRYLP Y + R++ +M +P+ V++T P+ R
Sbjct: 2 DPFRKAIKGYDHDRIPVWFMRQAGRYLPSYMKYRQRMG-IEEMMSSPDVIVDVTHDPVDR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAI+F+DI +G VRF+++ GP ++ + D ++ P+ +
Sbjct: 61 IGVDAAIIFADITTPLSGMGLRVRFLDSVGPVVENNIEKSGISAVEEFDPS-SFSHPVLK 119
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+IS R++ + LIGF G P T+ SY+IS G +D + + +A+ ++ L+
Sbjct: 120 AISKYRERYAD--PLIGFAGGPVTLLSYIISDGVDRDLFRVKRMMITEEKAYQAVMTRLT 177
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
D+ E+ QI AGVD QIFD+ AG L E+E++ V I+ + I F
Sbjct: 178 DMIIEFARMQISAGVDAFQIFDSWAGYLSPGEYEHFVKPYVYDILQELSGS---IPTIYF 234
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
+ + + ++ +DW + + F+ E+ E +QGNLDP + + + +
Sbjct: 235 STMTSSYVADM--DLPADFYSIDWRIDMKRFSAEIPDEKGIQGNLDPAIVNY-DYALHEA 291
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ G +IFN GHG+ P DP+ + LV+ V S
Sbjct: 292 SKIVEAASGRDRYIFNTGHGLLPSTDPEKLKRLVEYVHS 330
>gi|221058188|ref|XP_002261602.1| uroporphyrinogen decarboxylase [Plasmodium knowlesi strain H]
gi|194247607|emb|CAQ41007.1| uroporphyrinogen decarboxylase, putative [Plasmodium knowlesi
strain H]
Length = 414
Score = 307 bits (787), Expect = 1e-81, Method: Composition-based stats.
Identities = 102/355 (28%), Positives = 189/355 (53%), Gaps = 26/355 (7%)
Query: 4 RKQKILEVLQGNVINPP----PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
+ +L V++ P+W MRQAGRYLPEYR++R K+ +F+ MC P + E+T
Sbjct: 63 KNDLVLRVIENKDTERAQERIPVWFMRQAGRYLPEYREMRAKY-DFIQMCQNPHLSSEVT 121
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFL 117
+ P +R++ D ++FSDIL+I A+G +V+FVEN GP+ D + +E L P ++ +
Sbjct: 122 IMPFKRFSCDMLVIFSDILIIFIAMGMHVQFVENVGPKFDKTVSSFEEFQKLIPPLEQII 181
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++ SIS+ + K+ N + L+GF G+P+T+ +Y+ K + Y+
Sbjct: 182 KNLHYVYDSISLTKHKINNAVPLLGFAGSPFTLFTYLTKNN-KKTYEDTIQMIYERPGDV 240
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ +L+ LS+V +LI QI +G +VIQ+F+++A + + F +++ + ++I+ V++
Sbjct: 241 HNILNKLSEVCVSHLINQIDSGANVIQLFESNADIIDTNLFCDFSLFYLKKVINMVKKLR 300
Query: 238 PNAKFISFAKGAGY---------MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
P+A I F K + +L + +N +++ + +QG
Sbjct: 301 PHAFIILFLKENFHPDVKDLNIDVLSITHKQLAANTSTFYYNL-------FDGKIILQGA 353
Query: 289 LDPMRLVVGNQVMIDG-VNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
LDP ++V ++ ++ ++ + +I NLGHG+ P +NV + TV
Sbjct: 354 LDPHIMLVNDENLVSKYTCQMVSQIRHTNKYIANLGHGMLPGSKIENVQAFIDTV 408
>gi|313205040|ref|YP_004043697.1| uroporphyrinogen decarboxylase [Paludibacter propionicigenes WB4]
gi|312444356|gb|ADQ80712.1| uroporphyrinogen decarboxylase [Paludibacter propionicigenes WB4]
Length = 344
Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats.
Identities = 119/347 (34%), Positives = 180/347 (51%), Gaps = 16/347 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L+G PP+W MRQAGR LP Y ++R+++ +F ++ PE T E+TL P+
Sbjct: 2 SNTIFTDTLKGIKRERPPVWFMRQAGRVLPSYLKLREQY-SFRELMLNPELTAEVTLLPV 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT--QEIYLLNPNIDLFLNYL 120
DAAILFSDILVI +ALG +++F E +GP D P+ + L P++ L
Sbjct: 61 NDLGVDAAILFSDILVIPEALGMDLKFTE-KGPIFDSPLQDAVNQYSSLQPDV----TKL 115
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK-DHGQNRVFAYQNSRAFNW 179
I++++ ++R++ P + LIGFCGAP+T YM+ G + Y N
Sbjct: 116 EHIYKALDVIRERKPADVGLIGFCGAPFTTFCYMVEGNSANHTFSKAIKLFYNNPDISAK 175
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L+ ++D+S Y + Q G+DV Q+F+THAG + + V RI +AVR N
Sbjct: 176 ILEIITDLSIHYAVEQTKHGIDVFQLFETHAGLIPSDLYMERIMPHVSRITNAVRAN--N 233
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ-KEGPVQGNLDPMRLVVGN 298
I F KG G L ++ +G+DW L A + K+ VQGNLDP L + +
Sbjct: 234 VPVIFFPKGLGLGLAQVNFDV-ADFVGIDWQYSLPEARAIVDKKVGVQGNLDPRILSIDD 292
Query: 299 QVMIDGVNAILDVLGSGPF--IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ M+ A G + IFN GHG +P NV ++ V+S
Sbjct: 293 RTMLKKELAKFKAFGKDNYNWIFNTGHGFSPDNKVDNVKFVIDWVKS 339
>gi|48478485|ref|YP_024191.1| uroporphyrinogen decarboxylase [Picrophilus torridus DSM 9790]
gi|74572041|sp|Q6KZ54|DCUP_PICTO RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|48431133|gb|AAT43998.1| uroporphyrinogen decarboxylase [Picrophilus torridus DSM 9790]
Length = 331
Score = 306 bits (783), Expect = 4e-81, Method: Composition-based stats.
Identities = 105/346 (30%), Positives = 174/346 (50%), Gaps = 19/346 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + +++ + P+W MRQAGRYL EY + +K ++C PE ++
Sbjct: 1 MNS----FISMIRNGYSDTIPVWFMRQAGRYLKEYNE-KKGRMTIKEICMDPELIAGISY 55
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLN 118
P+R N DAAI+FSDI + +ALG + F+ GPR+ I ++ + +
Sbjct: 56 DPVRILNVDAAIIFSDITIPLEALGYKIEFLPG-GPRIINGYIKNHDMKDIIYFEESNFK 114
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y I+ +I I ++K H LIGF G TV SY+I+GG + + + FN
Sbjct: 115 Y--KIYDAIKIFKEKY--HFPLIGFSGGLITVLSYIIAGGPDSNLNLTKRSMLSD-DKFN 169
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
++ + D+ +Y+ Q+ AGVD IQIFD+ G L +ENY + I+S +
Sbjct: 170 DYINIIKDMIIKYIRLQVRAGVDAIQIFDSWLGYLSPQTYENYIKGHIEEILSEI----- 224
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN 298
N I F+ G +++ RL + + I +DW + + A + + +QGNLDP+
Sbjct: 225 NVPVIYFSTGTSSIIEKLSRL-NVDYISVDWRLDMKLARSMVNKKGLQGNLDPLIAAYNL 283
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + I++ G +IFNLGHG+ P+ +N+ +V V +
Sbjct: 284 RYALKETSDIINAAGRSSYIFNLGHGVIPETPVENLKHIVNFVHNF 329
>gi|224008602|ref|XP_002293260.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971386|gb|EED89721.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 364
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 111/357 (31%), Positives = 178/357 (49%), Gaps = 20/357 (5%)
Query: 8 ILEVLQGN-VINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRR 65
++ G + P+WL RQAGR+LPEY++ ++K +FLDM PE E T+QP+RR
Sbjct: 1 MIRAALGRSTVERTPVWLFRQAGRHLPEYQEYKQKTGRSFLDMLSYPEDVAECTMQPVRR 60
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEIYLLNPNIDL--FLN 118
Y+ DAAILFSDILVIA+A+ V G P P +E ++ L
Sbjct: 61 YDVDAAILFSDILVIAEAMNVKVTMPGGVGIQVPAPICGPADMKERLPAAEELNEQFVLE 120
Query: 119 YLLPIFQSISILR---KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
L + +S+ ++R +K I LIGF APWT+ YM+ G K+ + ++
Sbjct: 121 RLGHVIESVKLIRTQMRKEDISIPLIGFSAAPWTLMYYMVGGSSKKNTHIGIEWLNEHPE 180
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
A L+D L+ V EY+ Q+ AG ++Q+F+ + E F +A ++ +I ++
Sbjct: 181 ASTKLMDMLTTVVIEYMSEQVKAGAHMLQLFEAMGMMIDEPNFNKFAMPALEKISKELKS 240
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
+YP+ + FA+GA + + +L + + +D SV S A + + +QGN DP L
Sbjct: 241 RYPDVPLMVFARGASFANEQLSKL-GYDVVTIDGSVDRSTARDVVGGRAGLQGNYDPREL 299
Query: 295 VVG------NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + +L+ LG I NLG G+ + + V + VK V E
Sbjct: 300 IADHDGGRTKETVRKTTRELLEALGPQRLIANLGEGLGGKESTELVNEFVKAVHEES 356
>gi|330938623|gb|EGH42190.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 252
Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats.
Identities = 80/243 (32%), Positives = 127/243 (52%), Gaps = 8/243 (3%)
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
L P+ L Y + ++S +R++L + LIGF G+PWT+A+YM+ GG KD ++
Sbjct: 9 ALPIPDAQQDLGY---VMDAVSTIRRELNGRVPLIGFAGSPWTLATYMVEGGSSKDFRKS 65
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSV 226
+ Y N +A + LLD L+ YL QI AG +QIFD+ G L ++ ++ +
Sbjct: 66 KAMLYDNPQAMHLLLDKLAQSVTSYLNGQILAGAQAVQIFDSWGGSLSSAAYQEFSLAYM 125
Query: 227 GRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEG 283
+I++ + R+ I F KG G L++ + ++ +GLDW+ + A + +
Sbjct: 126 RKIVNRLIRENDGRKVPVIVFTKGGGLWLESIADI-GADTLGLDWTCDIGEARQRVGSKV 184
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+QGN+DP L + + V IL GSG +FNLGHGITP+VDP N + V
Sbjct: 185 SLQGNMDPTVLYARPEAIRQEVARILASYGSGTGHVFNLGHGITPEVDPANAGAFINAVH 244
Query: 343 SEK 345
Sbjct: 245 ELS 247
>gi|298708551|emb|CBJ49184.1| Uroporphyrinogen decarboxylase, chloroplast precursor [Ectocarpus
siliculosus]
Length = 402
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 91/344 (26%), Positives = 151/344 (43%), Gaps = 39/344 (11%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
++ +L V +G P+WLMRQAGRY+ +R+ K+ F
Sbjct: 79 SDEHDILLRVAKGEKAERAPVWLMRQAGRYMSAFRKYSDKYP-FRHRSEN---------- 127
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYL 120
P R GP + +PI T+ ++ L
Sbjct: 128 PGDRDR-------------------------GTGPVISNPIRTKADVEAVRVMEDIDGKL 162
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ LR + TLIGF GAPWT+A+Y I GG K + ++ F+ L
Sbjct: 163 PFVGETLKALRSETEGKSTLIGFVGAPWTLAAYSIEGGSSKHALHTKKMMMEDPTLFHSL 222
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ L++ +Y Q+ G VIQ+F++ A + +FE +A +S +++++P+
Sbjct: 223 MTKLANSIGDYACYQVENGAQVIQVFESWAHQMIPSQFETFAKPYADLAMSILKQRHPDV 282
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
I FA G L++ +R T ++ I LD V + A E L PV GN+DP+ L+
Sbjct: 283 PVIYFANGGSSYLES-QRDTQADMISLDQFVNMRSARERLGASVPVSGNVDPLVLLGPTS 341
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + V + + GS I NLGHG+ +V LV + +
Sbjct: 342 GIKEAVRSCVRDAGSSGHILNLGHGVLQTTPESSVAALVDSAKE 385
>gi|327399381|ref|YP_004340250.1| Uroporphyrinogen decarboxylase [Hippea maritima DSM 10411]
gi|327182010|gb|AEA34191.1| Uroporphyrinogen decarboxylase [Hippea maritima DSM 10411]
Length = 328
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 99/342 (28%), Positives = 161/342 (47%), Gaps = 20/342 (5%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ + L+ L+G P+W MRQAGR+L YR+IR+K+ L+M E VE+TL P
Sbjct: 2 KQSELFLKTLKGEKAGYTPVWFMRQAGRFLKSYRRIREKYP-LLEMFTNKELIVEITLLP 60
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
++ DA I+FSDIL+ G + + + + P + + N L L
Sbjct: 61 -KKLGVDALIIFSDILIPLKLFGAKIIYEDGKSP------SVIMDKSNIQYHENLENLSF 113
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+F++I +++ + L+GF AP+T+ Y+ G + + R Y+N F L+D
Sbjct: 114 LFEAIGEVKRH-KKDLALLGFAAAPFTLLCYVFGG---VEFFKLRGLMYENPDGFKKLMD 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ ++ +YL Q+++G D +Q+FD+ AG L E + RI +++
Sbjct: 170 LTTKMTIDYLNMQLNSGCDAVQLFDSWAGLLDEKTYRELVLPFNQRIAKSIK------PS 223
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
I F K + L + D + +DW L + VQGNLD L +
Sbjct: 224 IYFIK-NSHHLNHLLNKMDFDGFSIDWRSDL-VQVYTSTNRCVQGNLDNTVLFADEATIK 281
Query: 303 DGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
IL P IFNLGHG+ PQ D + + LV + +E
Sbjct: 282 TKTKEILKQTEKIPHIFNLGHGVLPQTDEEKIKMLVDFIHNE 323
>gi|13542123|ref|NP_111811.1| uroporphyrinogen decarboxylase [Thermoplasma volcanium GSS1]
gi|14325554|dbj|BAB60457.1| uroporphyrinogen decarboxylase [Thermoplasma volcanium GSS1]
Length = 332
Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 16/344 (4%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN L+ L G + P+W MRQAGRYL Y+ RKK M + V++T
Sbjct: 1 MNA----FLKALHGLDHDYIPVWFMRQAGRYLNVYKDYRKKLG-LEGMMTDADVIVKITH 55
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNY 119
P+ DAAI+F+DI LG VRF +N GP ++ ++ +N + N+
Sbjct: 56 SPVDMIGVDAAIIFADITTPLPGLGFKVRFEDNVGPIVLNNLSDNGFSGINEFDEASFNH 115
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
P+ ++IS+ R+ LIGFCG+P T+ SY+I+G F KD + + + +
Sbjct: 116 --PVLKAISMYREMYRE--PLIGFCGSPVTLLSYLIAGSFDKDLAKTKRLMLTDPSKYKE 171
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+ L+D S +Y QI GVD Q+FD+ AG L +++ +A + I+S + K
Sbjct: 172 ISTLLTDASVKYAKLQIKKGVDAFQLFDSWAGYLSPRQYKEFAVPYINDILSEIAGK--- 228
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F+ + ++ S+ I +DW V + ++ + +QGNLDP + +
Sbjct: 229 VPTIYFSTMTSSFV--FQSGIISDFISVDWRVEMDKVVKESGDYGLQGNLDPFIVNY-DY 285
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + I V G+ +IFN GHGI P DPK ++++VK V S
Sbjct: 286 AFAESEHIINAVKGNNRYIFNTGHGILPDTDPKRLIEIVKYVHS 329
>gi|300726134|ref|ZP_07059591.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Prevotella bryantii
B14]
gi|299776604|gb|EFI73157.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Prevotella bryantii
B14]
Length = 355
Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats.
Identities = 101/343 (29%), Positives = 172/343 (50%), Gaps = 9/343 (2%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ IL LQG P +W MRQAGR LP+Y ++R +F ++ +TP+ ++TL P
Sbjct: 16 DMNDLILRTLQGKKTERPAVWFMRQAGRVLPDYLKLRD-LHSFDEIMHTPDLCAQVTLMP 74
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+ DAAILFSDILV+ A+G N+ + + +GP Q + + + L
Sbjct: 75 VHTIGVDAAILFSDILVVPTAMGANISWTD-KGPVFSTPLCQYSDA-SKQLKPDASKLDY 132
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD-HGQNRVFAYQNSRAFNWLL 181
I+++I ++ ++ + LIGFCG P T YM+ G + + + N + L+
Sbjct: 133 IYRNIDEIKSRISDGTPLIGFCGGPLTTLCYMLQGRSTDNQFNDAVSYIFSNPAETDRLI 192
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+ L++++ EY Q+ GV + QIF+T+AG L ++E+ + ++ RI AV+
Sbjct: 193 EALTEMTIEYARNQVKHGVQLFQIFETNAGVLPQNEYIAHFMPAIRRIGQAVKEM--GVP 250
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQV 300
I FAKG G L+ + + +DW + A + + +QGNLDP L ++
Sbjct: 251 VIYFAKGLGLGLQAVTPDM-CDFVNIDWQMDFYEARKLVNPAIGLQGNLDPRILFASEEI 309
Query: 301 MIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + + +I NLGHG+ PQ K++ + V+
Sbjct: 310 IQQKLESYRPYWEEHHNWILNLGHGVPPQAPLKSLQFITNYVK 352
>gi|253787601|dbj|BAH84860.1| putative uroporphyrinogen decarboxylase [Cucumis sativus]
Length = 275
Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats.
Identities = 91/273 (33%), Positives = 148/273 (54%), Gaps = 5/273 (1%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+MRQAGRY+ YR++ +K+ +F + T + VE++LQP ++ D I+FSDIL A
Sbjct: 6 IMRQAGRYMAIYRKLAEKYPSFRERSETTDLIVEISLQPWEAFHPDGVIIFSDILTPLPA 65
Query: 84 LGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
LG + GP + PI ++E ID L+ L + +S+ +LRK++ ++G
Sbjct: 66 LGVPFDIEDIRGPVIHSPIRSEEGLKALHPID--LDKLNFVGESLKLLRKEVEGSAAVLG 123
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+A+Y++ GG + + + + LL + +EY+I QI G
Sbjct: 124 FVGAPWTIATYIVEGGTTRTYTTIKRMCHTAPHVLKTLLSHSTQAISEYIIYQIEHGAHC 183
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
IQIFD+ G L +E+++ + +I+S VR K P + + G G +L+ + T
Sbjct: 184 IQIFDSWGGQLPPDMWESWSKPYIQKIVSTVRDKCPETPLVLYINGNGGLLERM-KGTGV 242
Query: 263 NAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+ IGLDW+V ++ L + VQGN+DP L
Sbjct: 243 DVIGLDWTVDMADGRNRLGTDISVQGNVDPESL 275
>gi|298345855|ref|YP_003718542.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 43063]
gi|298235916|gb|ADI67048.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 43063]
Length = 343
Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats.
Identities = 104/343 (30%), Positives = 170/343 (49%), Gaps = 31/343 (9%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR +R+ K L+ C PE E+TLQP+RR++ DAA+ FSDI+V
Sbjct: 1 MRQAGRSLPEYRALREG-KTMLESCTIPEIAAEITLQPVRRHHVDAAVFFSDIVVPLYLA 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G ++ V + GP + P+T+ + + +L + I Q+ + +R++LP L+GF
Sbjct: 60 GADINIVPDRGPVLRQPLTS--VAEVEKLTELEVTDWSVIEQAAAHVRRELPYEKVLLGF 117
Query: 144 CGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GAP+T+ASY++ G + + + R F A+N L + + +S +++ AQI+ G +
Sbjct: 118 AGAPFTLASYLLEAGGPRRRECLETRAFVEAEPAAWNKLATWCAKLSGQFMKAQINGGAE 177
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+Q+FD+ AG L E+ +A P A I F G ++++ + +
Sbjct: 178 AVQLFDSWAGSLTASEYRQFALPYSSLAFQG----APGATHIHFGVGTAHLIEAMGEIAE 233
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGN------------------QVMID 303
+IG D + L A +QGNLDP LV + +
Sbjct: 234 VVSIGSD--LGLDAAARRLPGKVLQGNLDPDLLVTAEQPAQTDSTPTDAKPTDHMEQIWR 291
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+L + P IFNLGHG+ P+ DP + +L + + +
Sbjct: 292 EAEKVLQTGLAAPAHIFNLGHGVRPETDPGVLTELTARIHTWR 334
>gi|240279822|gb|EER43327.1| uroporphyrinogen decarboxylase [Ajellomyces capsulatus H143]
Length = 289
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 94/268 (35%), Positives = 149/268 (55%), Gaps = 14/268 (5%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPI 67
Query: 64 RRY--NFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLF 116
RY DAAI+FSDILVI A+G V ++ +GP P+ + + +L+ N+D+
Sbjct: 68 ERYVGLIDAAIIFSDILVIPQAMGMTVEMIDKKGPSFPSPLKSPDDPQYRQILDKNVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + LIGFCGAPWT+ YM+ GG K Q++ + Y+ A
Sbjct: 128 -KELDYVYKAITLTRHKLKGRVPLIGFCGAPWTLLCYMVEGGGSKMFIQSKTWVYRYPEA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
LL ++++ EYL Q+ AG ++Q+FD+ AG L F +++ + I + + R+
Sbjct: 187 SKALLQKIAEICVEYLALQVVAGSQLVQVFDSWAGELSPASFADFSLPYLRYISANLPRR 246
Query: 237 Y-----PNAKFISFAKGAGYMLKNYRRL 259
FAK ++ + L
Sbjct: 247 LAELGQEAVPMTVFAKDEEGPIEGLQTL 274
>gi|304570543|ref|YP_265770.2| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 333
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 119/345 (34%), Positives = 185/345 (53%), Gaps = 13/345 (3%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++ I+ N PIWLMRQAGRYLPE+R+IRK +F+++C + E+TL
Sbjct: 1 MTPIQETIIN----KKTNNSPIWLMRQAGRYLPEFREIRKLNPDFINLCLNENLSSEITL 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
QP++R++ DAAI+FSDIL+I L + V+F +N GP++ + ++I ++ F+ L
Sbjct: 57 QPLKRFDLDAAIIFSDILMIPYGLNQEVKFEKNFGPKLGLLDLEKISKIDEI--DFVEKL 114
Query: 121 LPIFQSISILRK-KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
P+++SI + + L + LIGF GAPWT+ YMI+ K F ++ N
Sbjct: 115 YPVYKSIKKVSEDNLIKNKNLIGFVGAPWTLLVYMINKHSPKKELVKDFF--KDEFLINR 172
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
+L L ++ QI G VIQIFD+ AG L E + NY +++ ++ N
Sbjct: 173 VLIILEKFLKLHIDQQIKNGATVIQIFDSWAGLLEEKDLPNYVYVPTLNLVNYIKSL--N 230
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
I F +G KNY + +A+ +D+ V A + + + PVQG LDP L+ +
Sbjct: 231 IPVICFPRGIKN-YKNYCDIVKPDAVNIDYDVDPVSACK-EIKIPVQGGLDPKILLTDKE 288
Query: 300 VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ L+ P+IFNLGHG+ P+ +P V LVK V+
Sbjct: 289 NLKKETLKYLNTFKDHPYIFNLGHGVLPETNPNMVEYLVKIVKDY 333
>gi|167535436|ref|XP_001749392.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772258|gb|EDQ85913.1| predicted protein [Monosiga brevicollis MX1]
Length = 643
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 110/370 (29%), Positives = 168/370 (45%), Gaps = 53/370 (14%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + IL+ +G P+W + L P
Sbjct: 67 KNEVILQAARGEETPYVPVWW-----------------------LSPLVAIAALPPLNPP 103
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEI-YLLNPNIDLFLNYLL 121
+ DAAI+FSDILV+ ALG GP PI T E LNP++D+ L
Sbjct: 104 FFTSPDAAIIFSDILVVPQALGLECLMQPGIGPVFPKPIETPEDLARLNPSVDVQAE-LG 162
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++I++ R +L H LIGF GAPWT+ +YMI G K + R + YQ A + LL
Sbjct: 163 YVFEAITLTRHRLQGHAPLIGFAGAPWTLFAYMIEGKSSKTWDKARAWLYQYPEASHRLL 222
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQ-----------------------IFDTHAGCLGEHEF 218
D +++ + +YL+ Q+HAG ++Q +FD+ AG L F
Sbjct: 223 DMITNCTIQYLVGQVHAGAQMLQRRWPINSTPHPHPPPSAADLSGPVFDSWAGSLQHDIF 282
Query: 219 ENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-F 275
+ + RI S+V+ I FAKGA + +K+ TD + GLD + +
Sbjct: 283 REFVLPRLARIASSVKALLGPKAVPMICFAKGAAWAMKDL-EHTDYDVQGLDETADVEQV 341
Query: 276 ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVL 335
A L+ +QGNLDP + + V+ V A++ + I NLGHG+TP ++P+ V
Sbjct: 342 AALLKGRVALQGNLDPAVMYASDDVIRARVGAMMAKFPARGHIANLGHGMTPTMEPRAVA 401
Query: 336 DLVKTVRSEK 345
LV V + +
Sbjct: 402 ALVDAVHAFR 411
>gi|156100807|ref|XP_001616097.1| uroporphyrinogen decarboxylase [Plasmodium vivax SaI-1]
gi|148804971|gb|EDL46370.1| uroporphyrinogen decarboxylase, putative [Plasmodium vivax]
Length = 422
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 187/356 (52%), Gaps = 28/356 (7%)
Query: 4 RKQKILEV----LQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
R +L V +G + P+W MRQAGRYLPEYRQ+R K +F +MC + E+T
Sbjct: 64 RNDLVLRVIENKAEGRALERIPVWFMRQAGRYLPEYRQMRSK-HDFFEMCQDANLSSEVT 122
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT--QEIYLLNPNIDLFL 117
+ P++R+ D ++FSDIL++ A+G ++ F+E+ GP D T +E ++ ++ +
Sbjct: 123 IMPLKRFPCDMLVVFSDILIVFVAMGISITFIESVGPTFDQRVTSFEEFQRVSLPLEEVI 182
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++ +I++ ++K+ N + ++GF G+P+T+ +Y+ + + + Y+
Sbjct: 183 KNLHYVYDAINLTKQKINNAVPILGFAGSPFTLFTYLTKNN-KRTYEDSIRMIYECPEDV 241
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ +L LSDV +L+ QI +G +V+Q+FD++A + H F +++ + R+++ V++
Sbjct: 242 HKILGKLSDVCVSHLVNQIDSGANVVQLFDSNADVIDTHLFAHFSLFYIKRVVNTVKKLR 301
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ----------KEGPVQG 287
P+A I F K + D + +D L + + +QG
Sbjct: 302 PHAFIILFLKENFH--------PDVKHLHIDVLSITHKQLAMNSSSFFYNLFDGKIILQG 353
Query: 288 NLDPMRLVVGNQVMI-DGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
LDP +++ ++ ++ + +++ + +I NLGHG+ P +NV ++ V
Sbjct: 354 ALDPHIMLLQDEELVSQHTSQMINQIRHTNKYIANLGHGMLPGSRVENVRAFIRAV 409
>gi|219128227|ref|XP_002184319.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
gi|217404120|gb|EEC44068.1| uroporphyrinogen decarboxylase [Phaeodactylum tricornutum CCAP
1055/1]
Length = 366
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 111/358 (31%), Positives = 176/358 (49%), Gaps = 17/358 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQP 62
+ +L G + P+WL RQAGR+LPEY+ + + KNFL++ +P E T+QP
Sbjct: 2 QNDLLLRAAVGEKVEQTPLWLFRQAGRHLPEYQDYKAQTNKNFLELLASPACVAECTMQP 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE-IYLLNPNIDLFLN-- 118
IRRY+ DAAILFSDILV+ +ALG V G + +P+T+ E ++ P+ID
Sbjct: 62 IRRYDLDAAILFSDILVVPEALGIQVTMPGGVGILVPEPLTSPEEVHTRLPSIDQITPDF 121
Query: 119 ---YLLPIFQSISILR---KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
L + +++ +R + I LIGF APWT+ YM+ G K+ +
Sbjct: 122 VQTKLAHVIEAVRTIRTQMAEENKSIPLIGFSAAPWTLMYYMVGGSSKKNTELGVTWLED 181
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
A LL L+ + EY+ AQ+ AG V+Q+F+ + + FE +A + I
Sbjct: 182 YPEASGDLLALLTKIVVEYMDAQVLAGAHVLQVFEAMGMMIDDVNFEKHALPCLRTIAQE 241
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
++ ++P+ + F +GA ++ L + I +D SV + +L +QGN DP
Sbjct: 242 LKTRHPDIPLMVFCRGACHLNNQLVGL-GYDVITMDGSVDRTTVRQQLGNTVTLQGNYDP 300
Query: 292 MRLVVGN----QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
L+ N + + +L LG I NLG G+ + P+ V VK + E
Sbjct: 301 AELIEENGKTVETVRATAKKLLQELGPQRLIANLGEGLGGKESPELVDAFVKAIHEES 358
>gi|68063873|ref|XP_673932.1| uroporphyrinogen decarboxylase [Plasmodium berghei strain ANKA]
gi|56492139|emb|CAH96991.1| uroporphyrinogen decarboxylase, putative [Plasmodium berghei]
Length = 419
Score = 299 bits (767), Expect = 3e-79, Method: Composition-based stats.
Identities = 109/363 (30%), Positives = 194/363 (53%), Gaps = 28/363 (7%)
Query: 5 KQKILEVL---------QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
IL V+ + N P W+MRQ+GRYLPEYR+++K + NF D+CY PE +
Sbjct: 63 NDLILRVIENKDKEIDEKDEKNNEIPFWMMRQSGRYLPEYRELKKNY-NFFDLCYNPELS 121
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--EIYLLNPNI 113
+T+ P +R+ D ++FSDIL+I A+G +++FVEN GP + + LN N+
Sbjct: 122 SNITIMPYKRFLCDMVVIFSDILIIFIAMGIDIKFVENVGPIFNKEINNLDDFKKLNLNL 181
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAY 171
+N L ++ SI++ +KK+ N + ++GFCG+P+T+ +Y+ K + + Y
Sbjct: 182 KEIINNLHFVYDSINLTKKKINNSVPVLGFCGSPFTLFTYLTKDNASKLKPYENSLKLIY 241
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
+NS + +L+ L ++ +L+ QI G ++IQIFD++A + ++ F+ ++ + +I+
Sbjct: 242 ENSEDTHQILNILCNICISHLLNQIDGGANLIQIFDSNAEIVDKNIFKEFSLYYINKIVQ 301
Query: 232 AVRRKYPNAKFISFAKGAGY-----MLKNYRRLTDSNAI--GLDWSVPLSFALELQKEGP 284
A++ PN I F K + + + +T I G ++ L Q +
Sbjct: 302 AIKTYRPNTYIILFVKDNFHENIKNLDIDILSITHKQLINNGSNYYYDL-----FQNKII 356
Query: 285 VQGNLDPMRLVVGNQV-MIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+QG LDP L++ N+ + + ++ + +I NLGHGI P +NV ++ V+
Sbjct: 357 LQGALDPHILLLDNKENVQKYTSKMIQQISYKNKYIANLGHGILPNSKIENVYAFIQAVK 416
Query: 343 SEK 345
S K
Sbjct: 417 SVK 419
>gi|727241|gb|AAA64267.1| uroporphyrinogen decarboxylase-like protein [Caulobacter crescentus
CB15]
Length = 294
Score = 299 bits (766), Expect = 4e-79, Method: Composition-based stats.
Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 3/289 (1%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ K L L+G PP+W MRQAGRYLPEYR +R +F+ C+ PE E+TLQP
Sbjct: 9 KQTPKFLSALEGQSHANPPVWFMRQAGRYLPEYRAVRATAPDFISFCFDPEKAAEVTLQP 68
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+RR+ FDA+I+F+DIL+I ALG+ V F EGP++ + + L
Sbjct: 69 MRRFPFDASIVFADILLIPGALGQKVWFEAGEGPKLG--DMPSVESMAEKAGEAGKALSL 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++++ +R L LIGF GAPWTVA+YMI G D R FAYQN + L+
Sbjct: 127 VGETLTRVRSALDPDKALIGFAGAPWTVATYMIEKGSS-DRSGARTFAYQNPETLDALIQ 185
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L D + +YL Q+ AG +++F++ A L E FE + RII +R +
Sbjct: 186 VLVDATIDYLAMQVDAGAQALKLFESWAEGLSEPLFEPLVTQPHIRIIEGLRARGVTVPI 245
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDP 291
I F +GAG ++++Y T + LD S +QK +QG LDP
Sbjct: 246 IGFPRGAGTLVEDYAARTPVQGVALDTSASAKLGQTIQKTKTIQGALDP 294
>gi|217073550|gb|ACJ85135.1| unknown [Medicago truncatula]
Length = 351
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 4/284 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++ +G+ ++ PP W+MRQAGRY+ YR++ +K +F + T + VE++LQP +
Sbjct: 55 DPLLVKAARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWK 114
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ D I+FSDIL A G + + GP + PI ++E + ID + L +
Sbjct: 115 AFRPDGVIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHPID--FDKLRFV 172
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+S+ IL++++ ++GF GAPWT+A+Y++ G + + + + LL
Sbjct: 173 GESLKILQQEVGGDAAVLGFVGAPWTLATYIVERGTTRTYTNIKSMCHTAPHILRTLLSH 232
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
LS A+Y++ Q+ +G IQIFD+ G L H +E ++ + I++ V++K P
Sbjct: 233 LSKAIADYIVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVNLVKKKVPRHTTC 292
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQ 286
S K L T + IGLDW+V ++ L VQ
Sbjct: 293 SLYKMENGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQ 336
>gi|254456526|ref|ZP_05069955.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083528|gb|EDZ60954.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 333
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 109/341 (31%), Positives = 183/341 (53%), Gaps = 13/341 (3%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRY 66
+ +V++ PIW+MRQAGRYLPE+R+IRK +F+ +C + + E+TLQP++R+
Sbjct: 3 PLHQVIKNKNTKIKPIWIMRQAGRYLPEFREIRKLNPDFIKLCLNEDLSSEITLQPLKRF 62
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
+ DAAI+FSDIL++ L + V F +N GP + I EI + + F+ + P++++
Sbjct: 63 DLDAAIIFSDILMLPYGLNQKVEFKKNFGPILGQININEISKI--SETDFVEKIFPVYKA 120
Query: 127 I-SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
+ + ++ ++ IGF GAPWT+ YMI+ K ++ F +N +L L
Sbjct: 121 LDKVSNNQITSNKNTIGFVGAPWTLLVYMINQQSPKKDLKHDFFEDKN--LIKKILSILE 178
Query: 186 DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
++ Q+ G +VIQIFD+ AG L + ENY +++ V+ N I F
Sbjct: 179 KFLMIHIKNQVKNGANVIQIFDSWAGLLQGKDLENYIYFPTLNLVNYVKSL--NVPVICF 236
Query: 246 AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDPMRLVVGNQVMID 303
+ K + + +A+ +D++V ++ K+ P+QG LDP L+ + +
Sbjct: 237 PREIKN-YKKFCEVVKPDAVSIDYNVDP---KQILKDIQIPIQGGLDPKVLLSDKENLKK 292
Query: 304 GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
LD+ P+IFNLGHG+ P+ DP + LVK V+
Sbjct: 293 ETIKYLDIFKDHPYIFNLGHGVLPETDPNMMDHLVKIVKDY 333
>gi|73977142|ref|XP_861837.1| PREDICTED: similar to Uroporphyrinogen decarboxylase (URO-D) (UPD)
isoform 3 [Canis familiaris]
Length = 272
Score = 299 bits (765), Expect = 5e-79, Method: Composition-based stats.
Identities = 85/267 (31%), Positives = 130/267 (48%), Gaps = 8/267 (2%)
Query: 86 RNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
V V +GP +P+ + + + L +FQ+I++ R++L + LIGF
Sbjct: 1 MEVTMVPGKGPSFPEPLREERDLERLRDPAAVASELGYVFQAITLTRQRLAGRVPLIGFA 60
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
GAPWT+ +YMI GG Q + + YQ +A + LL L+D YL+ Q+ AG +Q
Sbjct: 61 GAPWTLMTYMIEGGSSSTMAQAKRWLYQKPQASHQLLRILTDALVPYLVGQVAAGAQALQ 120
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRRL 259
+F++HAG LG F +A V + V+ + I FAK + L+ +
Sbjct: 121 LFESHAGHLGPQLFNKFALPYVRDVAKRVKARVQEAGLAPVPMIIFAKDGHFALEELAQ- 179
Query: 260 TDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFI 318
+GLDW+V A E + K +QGNLDP L + + V +LD G +I
Sbjct: 180 AGYEVVGLDWTVAPEKARERVGKMVTLQGNLDPCALYASEEEIGRLVQKMLDDFGPQRYI 239
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEK 345
NLGHG+ P +DP++V V V
Sbjct: 240 ANLGHGLYPDMDPEHVGAFVDAVHKYS 266
>gi|86170683|ref|XP_966063.1| term=uroporphyrinogen III
decarboxylase;db_xref=PMID:19041871;evidence=inferred
from direct assay [Plasmodium falciparum 3D7]
gi|46362305|emb|CAG25243.1| term=uroporphyrinogen III
decarboxylase;db_xref=PMID:19041871;evidence=inferred
from direct assay [Plasmodium falciparum 3D7]
gi|70780288|gb|AAZ08395.1| uroporphyrinogen III decarboxylase [Plasmodium falciparum]
Length = 413
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 98/332 (29%), Positives = 183/332 (55%), Gaps = 14/332 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+W+MRQAGRYLPEY +IRKK+ +F ++C +P+ + +++ P R+ D ++FSDIL+I
Sbjct: 83 PLWIMRQAGRYLPEYVEIRKKY-DFFEICKSPDLSSYVSIMPYDRFKTDMIVIFSDILII 141
Query: 81 ADALGRNVRFVENEGPRMDP--ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++FVEN GP + + LN N+ ++ L ++ SI++ +KK+ N +
Sbjct: 142 FVAMGIDIKFVENLGPVFNLEIYNMNDFNKLNLNMKEIIDNLYYVYDSINLTKKKINNDV 201
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
++GFCG+P+T+ Y+ K + + F Y+ + +++ LSD+ +LI QI +
Sbjct: 202 PILGFCGSPFTLFMYLTKNN-KKTYEDSFKFLYEKPNDAHQIINKLSDICLNHLINQIDS 260
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G ++IQIFD++A + ++ F ++ + ++I +++ PN I F K + + +
Sbjct: 261 GANIIQIFDSNAELVDKNIFNEFSIIYLKKVIEIIKKYRPNIYIILFIKNNFH---DDIK 317
Query: 259 LTDSNAIGLDWSVPLSFALE-----LQKEGPVQGNLDPMRLVVGNQVMIDG--VNAILDV 311
+ + + + + Q +QG LDP L++ + +I + + ++
Sbjct: 318 NLKIDVLSITHKQLIDNTDQFYFKLFQNNIILQGALDPYILLLNDHELIQKHIIQMMKNI 377
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I NLGHGI P KNV + T+R+
Sbjct: 378 THKNKYIANLGHGILPTTKIKNVNLFIDTIRN 409
>gi|83314562|ref|XP_730413.1| uroporphyrinogen decarboxylase [Plasmodium yoelii yoelii str.
17XNL]
gi|23490130|gb|EAA21978.1| uroporphyrinogen decarboxylase, putative [Plasmodium yoelii yoelii]
Length = 372
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 105/336 (31%), Positives = 189/336 (56%), Gaps = 15/336 (4%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P W+MRQAGRYLPEYR+++K + NF DMCY PE + +T+ P +R+ D ++FSDIL+I
Sbjct: 41 PFWIMRQAGRYLPEYRELKKNY-NFFDMCYNPELSSNITIMPYKRFLCDMVVIFSDILII 99
Query: 81 ADALGRNVRFVENEGPRMDPITTQ--EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
A+G +++F+EN GP + + LN N+ +N L ++ SI++ +KK+ N +
Sbjct: 100 FIAMGIDIQFIENVGPIFNKKINNLDDFKTLNLNLKEIINNLHFVYDSINLTKKKINNSV 159
Query: 139 TLIGFCGAPWTVASYMISGGFIK--DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
L+GFCG+P+T+ +Y+ K + + Y+NS + +L+ L ++ +++ QI
Sbjct: 160 PLLGFCGSPFTLFTYLTKDNTSKLSPYENSLKLIYENSEDTHHILNTLCNICISHVLNQI 219
Query: 197 HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+G ++IQIFD++A + ++ F+ ++ + +II A+++ PN I F K + ++
Sbjct: 220 DSGANLIQIFDSNAEIVDKNIFKKFSLNYINKIIQAIKKYRPNIYVILFIKDNFH--EDI 277
Query: 257 RRLTDSNAIGLDWSVPLSFALE-----LQKEGPVQGNLDPMRLVVGNQVMID--GVNAIL 309
+ L D + + + ++ Q + +QG LDP L++ N+ + I
Sbjct: 278 KNL-DIDVLSITHKQLINNGSNYYYNLFQNKIILQGALDPHILLLDNKKNVQKYASEMIQ 336
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ +I +LGHGI P +NV ++ V+S K
Sbjct: 337 QISHKNKYIASLGHGILPNSKIENVYAFIQAVKSVK 372
>gi|70945538|ref|XP_742577.1| uroporphyrinogen decarboxylase [Plasmodium chabaudi chabaudi]
gi|56521640|emb|CAH75805.1| uroporphyrinogen decarboxylase, putative [Plasmodium chabaudi
chabaudi]
Length = 390
Score = 292 bits (749), Expect = 4e-77, Method: Composition-based stats.
Identities = 104/364 (28%), Positives = 196/364 (53%), Gaps = 31/364 (8%)
Query: 4 RKQKILEVLQ-----------GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTP 52
IL V++ G P W+MRQAGRYLPEYR+++K + +F D+CY P
Sbjct: 32 SNDLILRVIENKDKEIDEKDEGEKNE-IPFWIMRQAGRYLPEYRELKKNY-DFFDLCYNP 89
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIY-LLN 110
E + ++T+ P +R++ D ++FSDIL+I A+G +++FVEN GP + I E + LN
Sbjct: 90 ELSSDITIMPYKRFSCDMVVIFSDILIIFIAMGIDIKFVENVGPIFNKEINNLEDFTKLN 149
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK--DHGQNRV 168
N+ +N L ++ SI++ ++K+ N + ++GFCG+P+T+ +Y+ K + ++
Sbjct: 150 LNLKEIINNLHFVYDSINLTKRKINNSVPVLGFCGSPFTLFTYLTKNHVSKLMPYEKSLK 209
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGR 228
Y++S + +L+ L ++ +L+ QI +G ++IQIFD++A + ++ F+ ++ + +
Sbjct: 210 LIYEHSADTHTILNILCNICISHLLNQIDSGANLIQIFDSNAEIVDKNIFKEFSLYYINK 269
Query: 229 IISAVRRKYPNAKFISFAKGAGY-----MLKNYRRLTDSNAI--GLDWSVPLSFALELQK 281
I+ ++ PN I F K + + +T I G ++ L +
Sbjct: 270 IVHTIKAYRPNTYIILFVKDNFHDDIKNLDIEILSITHKQLINNGSNYYYDL-----FKN 324
Query: 282 EGPVQGNLDPMRLVVG-NQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
+ +QG LDP L++ + + + ++ + +I +LGHGI P +NV ++
Sbjct: 325 KIILQGALDPHILLLDNKETVKKYTSQMIQQISYKNKYIASLGHGILPNSKIENVHAFIQ 384
Query: 340 TVRS 343
V+S
Sbjct: 385 AVKS 388
>gi|323305601|gb|EGA59342.1| Hem12p [Saccharomyces cerevisiae FostersB]
Length = 289
Score = 290 bits (744), Expect = 1e-76, Method: Composition-based stats.
Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 12/282 (4%)
Query: 72 ILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLF-LNYLLPIFQSISI 129
+ DILVI A+G V +E +GP +P+ E + + L L F++I++
Sbjct: 4 LFLVDILVIPQAMGMRVEMLEGKGPHFPEPLRNPEDLQTVLDYKVDVLKELDWAFKAITM 63
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
R KL + L GFCG PWT+ YM GG + + + + LL ++DV+
Sbjct: 64 TRIKLDGEVPLFGFCGGPWTLMVYMTEGGGSRLFRFAKQWINMYPELSHKLLQKITDVAV 123
Query: 190 EYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY------PNAKFI 243
E+L Q+ AG ++Q+F++ G L +F+ ++ + +I V ++ I
Sbjct: 124 EFLSQQVVAGAQILQVFESWGGELSSVDFDEFSLPYLRQIAERVPKRLQELGIMEQIPMI 183
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLVVGNQVMI 302
FAKG+ Y L + + + LDWS A+++ K +QGNLDP + +V+
Sbjct: 184 VFAKGSWYALDKLC-CSGFDVVSLDWSWDPREAVKINKNRVTLQGNLDPGVMYGSKEVIT 242
Query: 303 DGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVR 342
V +++ G G +I N GHG P +DP + ++
Sbjct: 243 KKVKQMIEAFGGGKSRYIVNFGHGTHPFMDPDVIKFFLEECH 284
>gi|257076917|ref|ZP_05571278.1| uroporphyrinogen decarboxylase [Ferroplasma acidarmanus fer1]
Length = 335
Score = 289 bits (739), Expect = 6e-76, Method: Composition-based stats.
Identities = 101/349 (28%), Positives = 173/349 (49%), Gaps = 18/349 (5%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN + L+ + P+W MRQAGRY+ EY+++R K N MC PE T ++T
Sbjct: 1 MNN----FIPALKQEPHDHIPVWFMRQAGRYMDEYKELR-KLYNIRQMCMDPEITEKITY 55
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLN 118
P++ DAAI+F+DI++ +A+G + F + GP + + + ++ L
Sbjct: 56 APVKLLGVDAAIIFADIILPLEAMGYKIDFNSS-GPDIGNGYRHNKSMEGIHEFNTGDLK 114
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
Y + +I + ++ P LIGF G TV SY+I+G + + + +F
Sbjct: 115 YRT--YDAIRLFKQNHP-ETPLIGFSGGIITVMSYIIAGVSDNNLVYTKKVMLNDP-SFG 170
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
+ + ++ +Y+ Q+ AGVD IQIFD+ G L + FE Y + ++ +++ K
Sbjct: 171 IMKKMIKNMILDYVTMQVKAGVDAIQIFDSWLGALSPYTFEKYLKNDIIELVESIKSK-- 228
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVG 297
I F+ G+ M++ + + + + +DW + LS A L +QGNLDP +
Sbjct: 229 -VPVIYFSTGSSGMIEQFNDI-KPDILSVDWRIKLSHARTILNGSIGMQGNLDPYLVQYS 286
Query: 298 NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ ++ IL G +IFNLGHG+ P+ DP + + TV S +
Sbjct: 287 REAALEETGRILGEAGKDDNYIFNLGHGVLPETDPDTLKSITDTVHSYR 335
>gi|91762524|ref|ZP_01264489.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062164|gb|AAZ21167.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718326|gb|EAS84976.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 313
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 112/321 (34%), Positives = 175/321 (54%), Gaps = 9/321 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R+IRK +F+++C + E+TLQP++R++ DAAI+FSDIL+I L
Sbjct: 1 MRQAGRYLPEFREIRKLNPDFINLCLNENLSSEITLQPLKRFDLDAAIIFSDILMIPYGL 60
Query: 85 GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRK-KLPNHITLIGF 143
+ V+F +N GP++ + ++I ++ F+ L P+++SI + + L + LIGF
Sbjct: 61 NQEVKFEKNFGPKLGLLDLEKISKIDEI--DFVEKLYPVYKSIKKVSEDNLIKNKNLIGF 118
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ YMI+ K F ++ N +L L ++ QI G VI
Sbjct: 119 VGAPWTLLVYMINKHSPKKELVKDFF--KDEFLINRVLIILEKFLKLHIDQQIKNGATVI 176
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
QIFD+ AG L E + NY +++ ++ N I F +G KNY + +
Sbjct: 177 QIFDSWAGLLEEKDLPNYVYVPTLNLVNYIKSL--NIPVICFPRGIKN-YKNYCDIVKPD 233
Query: 264 AIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
A+ +D+ V A + + + PVQG LDP L+ + + L+ P+IFNLGH
Sbjct: 234 AVNIDYDVDPVSACK-EIKIPVQGGLDPKILLTDKENLKKETLKYLNTFKDHPYIFNLGH 292
Query: 324 GITPQVDPKNVLDLVKTVRSE 344
G+ P+ +P V LVK V+
Sbjct: 293 GVLPETNPNMVEYLVKIVKDY 313
>gi|154297638|ref|XP_001549245.1| hypothetical protein BC1G_12664 [Botryotinia fuckeliana B05.10]
gi|150858487|gb|EDN33679.1| hypothetical protein BC1G_12664 [Botryotinia fuckeliana B05.10]
Length = 327
Score = 285 bits (731), Expect = 4e-75, Method: Composition-based stats.
Identities = 90/248 (36%), Positives = 138/248 (55%), Gaps = 14/248 (5%)
Query: 15 NVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN--FDAAI 72
+ PP+W+MRQAGRYLPEY + + K +F + C +PE LTLQPI R+ DAAI
Sbjct: 82 QKVERPPMWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPIERFAGLVDAAI 140
Query: 73 LFSDILVIADALGRNVRFVENEGPRM-DPITTQEI----YLLNPNIDLFLNYLLPIFQSI 127
+FSDILVI A+G V V+ +GP +P+ + E +LN +D+ L ++++I
Sbjct: 141 IFSDILVIPQAMGMTVEMVDKKGPHFPEPLESPEDGQYERVLNKKVDVAAE-LDYVYKAI 199
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
++ R KL + L GFCGAPWT+ YM+ GG K + + + Y+ A LL +++V
Sbjct: 200 TLTRHKLKGRVPLFGFCGAPWTLLCYMVEGGGSKLFVKTKTWVYRYPEASKALLQKIAEV 259
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK-----YPNAKF 242
EYL Q+ AG ++Q+FD+ A L F+ ++ + I + ++
Sbjct: 260 CVEYLALQVKAGAQLVQVFDSWAAELSPSSFKEFSRPYLAYISENLPKRLKELGLEQVPM 319
Query: 243 ISFAKGAG 250
+ FAKGA
Sbjct: 320 VVFAKGAW 327
>gi|294675183|ref|YP_003575799.1| uroporphyrinogen decarboxylase [Prevotella ruminicola 23]
gi|294474031|gb|ADE83420.1| uroporphyrinogen decarboxylase [Prevotella ruminicola 23]
Length = 341
Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats.
Identities = 105/340 (30%), Positives = 152/340 (44%), Gaps = 9/340 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
V+ PP+W+MRQAGR LP YRQ+ K F + E+TL PI
Sbjct: 4 NPFFAVINHQPACRPPVWMMRQAGRVLPRYRQLTKMLP-FRTIMSYANLAAEVTLMPIDD 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
DAAILFSDILVI +ALG V + NEGP P ++ + ++L +
Sbjct: 63 MGMDAAILFSDILVIPEALGVKVEWT-NEGPAF-PHPLMDVEHPAAELSFSPSHLNHVAD 120
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD-HGQNRVFAYQNSRAFNWLLDFL 184
++ + + +IGFCG P T YM+ G + Y + LLD +
Sbjct: 121 TLDEIMGQKRADTPVIGFCGGPLTCLCYMLGGRDKTMQFTDVVRYLYTHREESLQLLDAI 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ S Y+ Q G+D QIF++ AG + +++ V RI +AVR+ I
Sbjct: 181 TSASETYVHLQAAHGIDTFQIFESFAGVISAELYQDMIMPFVRRITAAVRQH--GLPIIF 238
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMID 303
F KG G L D + + +DW PL A + +QGN+DP L V+
Sbjct: 239 FPKGFGAGL-QMLTPEDCDFVSIDWQTPLLVARHLVNPAIGIQGNMDPRILFAPQAVIEQ 297
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ L P +IFNLGHG+ +NV + + R
Sbjct: 298 HLQQYLAFFREHPNYIFNLGHGVHKDTPLENVQFVTEWFR 337
>gi|168698515|ref|ZP_02730792.1| uroporphyrinogen decarboxylase [Gemmata obscuriglobus UQM 2246]
Length = 341
Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 98/342 (28%), Positives = 148/342 (43%), Gaps = 15/342 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K ++ +G + P+W MRQAGR+ PE+R++R +F + E + +L P R
Sbjct: 8 KHLLIRAARGERVERAPVWAMRQAGRWDPEFRKVRAGM-SFFEFSENVEASTRASLCP-R 65
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-QEIYLLNPNIDLFLNYLLP 122
R+ DA ILF DI + A+G GP D P+ T ++ L PN
Sbjct: 66 RFGVDAIILFYDITTLPVAMGLPFELKPGAGPVPDRPVRTLGDLDRLAPNP--APETYAH 123
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I Q + ++ +L + ++ F GAP+TVA+Y I G KD R F +N LL+
Sbjct: 124 IRQLLKRVKDELHGDLPVLVFAGAPFTVATYCIGTG--KDVEATRAFVADAPAVWNGLLE 181
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L+ + +L I G D Q+FD+ AG L E++ +A S +
Sbjct: 182 RLTGATVGFLRTLIGDGADAYQLFDSWAGALSPAEYDAWAQP----QHSEILAGATGVPR 237
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVG-NQVM 301
I F K G L+ T ++ I L L+ A QGN+D L G + +
Sbjct: 238 ILFVK-EGPYLERMCA-TGADVISLGSVHDLAAARRDHPHLVFQGNVDEEILRGGTPEQV 295
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
D V A G I NL HG+ N V+ ++
Sbjct: 296 ADAVRACRRAGGGARHILNLNHGVDKDTPVANFEAYVRAAKA 337
>gi|302537556|ref|ZP_07289898.1| uroporphyrinogen decarboxylase [Streptomyces sp. C]
gi|302446451|gb|EFL18267.1| uroporphyrinogen decarboxylase [Streptomyces sp. C]
Length = 290
Score = 283 bits (724), Expect = 3e-74, Method: Composition-based stats.
Identities = 82/250 (32%), Positives = 134/250 (53%), Gaps = 7/250 (2%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ + + P+W MRQAGR LPEYR++R+ L+ C P+ E+T+QP+R
Sbjct: 47 DSAFLKACRREPVPHTPVWFMRQAGRSLPEYRKVREGTA-MLESCMRPDLVTEITMQPVR 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
R++ DAAI FSDI+V A+G ++ GP + PI +E L DL + +
Sbjct: 106 RHDVDAAIFFSDIVVPLKAIGVDLDIKPGIGPVVAQPIRRRED--LAQLRDLTPEDVAYV 163
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +L +L LIGF GAP+T+ASY++ GG K+H + Y + + + LLD
Sbjct: 164 TEAIGMLTGELGG-TPLIGFAGAPFTLASYLVEGGPSKNHEHTKALMYGDPQLWAELLDR 222
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
L+++++ +L QI AG +Q+FD+ G L ++ + +++ +V I
Sbjct: 223 LAEITSAFLKVQIEAGASAVQLFDSWVGALAPADYRRSVMPASAKVLESVASY--GVPRI 280
Query: 244 SFAKGAGYML 253
F G G +L
Sbjct: 281 HFGVGTGELL 290
>gi|221116841|ref|XP_002154197.1| PREDICTED: similar to uroporphyrinogen decarboxylase [Hydra
magnipapillata]
Length = 552
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 128/241 (53%), Gaps = 5/241 (2%)
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
LLN ++D+ + L + +I++ RK L LIGF GAPWT+ +YMI GG K + + +
Sbjct: 311 LLNVDVDVKIE-LKYVLDAITLTRKTLDGKCPLIGFAGAPWTLMAYMIEGGGSKTYSKVK 369
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVG 227
Y + + LL+ L+ V ++L+ Q+ AG ++Q+FD+HAG L F + +
Sbjct: 370 KCLYVDPDSCKNLLNILTRVCIDFLVEQVKAGAQILQVFDSHAGELSADMFNIFCLPYLK 429
Query: 228 RIISAVRRKYP---NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
I ++V++ + I FAKG+ Y LK+ +D + I LDW++ + A L
Sbjct: 430 DIATSVKKVLGPNQSVPMIIFAKGSHYALKDLGE-SDYDVIALDWTMNIEDARRLCPHKT 488
Query: 285 VQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ GNLDP L + + V ++ + G+ +I NLGHGI P VDP ++ V V
Sbjct: 489 LMGNLDPCALYSSKEDIDTRVKKMVQMFGTSKYIANLGHGIYPDVDPDHMEAFVNAVHRH 548
Query: 345 K 345
Sbjct: 549 S 549
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL+ +G ++ P+W+MRQAGRYLPE+R +R + F D+C TP E+T+ PI
Sbjct: 12 KNDLILKATRGENVSRVPVWVMRQAGRYLPEFRNLRVE-NEFFDVCRTPSLACEVTMMPI 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM 98
R+Y+ DAAI+FSDILVI ALG V + +GP
Sbjct: 71 RKYDLDAAIIFSDILVIPQALGMQVEMQKGKGPVF 105
>gi|148529989|gb|ABQ82201.1| uroporphyrinogen III decarboxylase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 276
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 102/273 (37%), Positives = 153/273 (56%), Gaps = 12/273 (4%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
+ +L VLQG + PPPIWLMRQAGRYLPE+R +R + +F+ C TP+ E+TLQPIRR
Sbjct: 3 KPLLRVLQGEAVWPPPIWLMRQAGRYLPEFRALRDQA-DFITRCMTPDLATEITLQPIRR 61
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ 125
Y D AILFSDIL++ A+G+++ FV +GP + I + E L + + P+ +
Sbjct: 62 YAMDGAILFSDILILPWAMGQSLDFVAGKGPILGAIRS-EADLARLDPKRVPDATAPVME 120
Query: 126 SISILRKKLPN----------HITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++S LR L +TL+GF GAP+TVA YM+ G ++ R AY +
Sbjct: 121 TLSRLRAILDGPDPIGAAQGGRVTLLGFAGAPFTVACYMVEGHGSREFDATRGMAYSDPL 180
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
F+ L+ L+ +A+ L+AQI AG + + +FD+ +G L +F + I+ ++
Sbjct: 181 LFDRLMATLTQATADMLVAQIDAGAEAVMLFDSWSGLLPPAQFRRHVIAPTRAIVQEIQA 240
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD 268
+ P I F + AG M Y R T + LD
Sbjct: 241 RRPGVPVIGFPRLAGIMAAEYARETGLRVMALD 273
>gi|219558683|ref|ZP_03537759.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 282
Score = 282 bits (721), Expect = 6e-74, Method: Composition-based stats.
Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 11/267 (4%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 10 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 68
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQPIRRY+ DAAILFSDI+V A G ++ V + GP + DP+ T +D
Sbjct: 69 EITLQPIRRYDVDAAILFSDIVVPLRAAGVDLDIVADVGPVIADPVRTAADVAAMKPLD- 127
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ P+ + S+L +L + LIGF GAP+T+ASY++ GG + H +
Sbjct: 128 -PQAIQPVLVAASLLVAEL-GDVPLIGFAGAPFTLASYLVEGGPSRHHAHVKAMMLAEPA 185
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+++ L+ L+D++ +L+ QI AGVD IQ+FD+ AG L ++ Y R+ +A+
Sbjct: 186 SWHALMAKLTDLTIAFLVGQIDAGVDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGE 245
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDS 262
F G +L +
Sbjct: 246 H--GVPMTHFGVGTAELLCAMSEAVTA 270
>gi|190345411|gb|EDK37292.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 12/272 (4%)
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G ++ VE +GP DP+ + E L L F++I++ RKKL + L+G
Sbjct: 1 MGFDIEMVEGKGPVFTDPLRSPEDIKKVNLKPDVLKSLDWAFKAITLTRKKLNGRVPLLG 60
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+ YM G K + + Y+ + + LL +D E+L Q+ AG +
Sbjct: 61 FVGAPWTLLVYMTEGQGSKMFRYAKQWIYEYTEEAHQLLQATTDACIEFLAQQVVAGAQM 120
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY------PNAKFISFAKGAGYMLKNY 256
+Q+F++ AG LG HEF + + +I + + + + FAKGA Y L +
Sbjct: 121 LQVFESWAGELGPHEFNEFCLPYLRQISAKLPARLRELGVTDDIPLTVFAKGAWYALDDL 180
Query: 257 RRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ N + LDW A+++ + +QGNLDP + N+V+ +++ G
Sbjct: 181 CD-SGYNCVSLDWLYKPEDAVKVVNGRRITLQGNLDPGIMYGSNEVISQKTKQMIEGFGG 239
Query: 315 GP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
G +I N GHG P + P+ V +K
Sbjct: 240 GKQNYIINFGHGTHPFMKPEKVEHFLKECHRY 271
>gi|146419515|ref|XP_001485719.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 274
Score = 280 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 12/272 (4%)
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G ++ VE +GP DP+ + E L L F++I++ RKKL + L+G
Sbjct: 1 MGFDIEMVEGKGPVFTDPLRSPEDIKKVNLKPDVLKSLDWAFKAITLTRKKLNGRVPLLG 60
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
F GAPWT+ YM G K + + Y+ + + LL +D E+L Q+ AG +
Sbjct: 61 FVGAPWTLLVYMTEGQGSKMFRYAKQWIYEYTEEAHQLLQATTDACIEFLAQQVVAGAQM 120
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY------PNAKFISFAKGAGYMLKNY 256
+Q+F++ AG LG HEF + + +I + + + + FAKGA Y L +
Sbjct: 121 LQVFESWAGELGPHEFNEFCLPYLRQISAKLPARLRELGVTDDIPLTVFAKGAWYALDDL 180
Query: 257 RRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L N + LDW A+++ + +QGNLDP + N+V+ +++ G
Sbjct: 181 CDL-GYNCVSLDWLYKPEDAVKVVNGRRITLQGNLDPGIMYGSNEVISQKTKQMIEGFGG 239
Query: 315 GP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
G +I N GHG P + P+ V +K
Sbjct: 240 GKQNYIINFGHGTHPFMKPEKVEHFLKECHRY 271
>gi|301167274|emb|CBW26856.1| uroporphyrinogen decarboxylase [Bacteriovorax marinus SJ]
Length = 345
Score = 275 bits (705), Expect = 6e-72, Method: Composition-based stats.
Identities = 99/331 (29%), Positives = 160/331 (48%), Gaps = 12/331 (3%)
Query: 20 PPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILV 79
P+W MRQAGRY Y+ I+K +F+ MC TP E+T PI + FDAAILFSD+L
Sbjct: 16 VPVWFMRQAGRYHSHYQNIKKN-SDFMTMCKTPALANEITHGPIDDFKFDAAILFSDLLF 74
Query: 80 IADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+ +G + V N GP +D I T + + ++ ++LR L
Sbjct: 75 PLEQMGMGL--VYNPGPILDKRINTLDDLKQLELKASAREFYNFQKEACTLLRSSLDKSK 132
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
TL+GF GAP+T+ SY + G + +++ Y F+ L+ L E + Q
Sbjct: 133 TLLGFVGAPFTLYSYAVEGSHAGNLTSSKLGLYD--GRFHGFLEKLIPELVENMCIQAEG 190
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G D + +FDT G L ++F+ Y ++ + A R ++P+ K I ++K +
Sbjct: 191 GADAMCLFDTAVGELHFNDFKKYIIPALKSVTKAFRERHPDKKVIYYSKLTHMEYLREIQ 250
Query: 259 LTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS--- 314
+ + +G+DW + LS AL EL + +QGN DP L + + + +N + L
Sbjct: 251 DDNIDVLGIDWRMNLSNALSELGNDYYIQGNFDPSWLHLPWEHVESNLNEMWQGLQDKNL 310
Query: 315 --GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I LGHG+ NV + V+ + +
Sbjct: 311 PLDKWICGLGHGVLQHTPESNVRNAVEYIHN 341
>gi|323455110|gb|EGB10979.1| hypothetical protein AURANDRAFT_12414 [Aureococcus anophagefferens]
Length = 360
Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 105/358 (29%), Positives = 167/358 (46%), Gaps = 18/358 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPI 63
+L + +G + P+WL RQAGR++ EY ++K +FL + P E+TLQP+
Sbjct: 1 NDLLLRLARGEAVEEAPVWLFRQAGRHMAEYNAYKEKTGKHFLQLLDDPLDVAEVTLQPL 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITT------QEIYLLNPNIDLF 116
RRY DAAILFSDILV+ AL V G + +P+TT L
Sbjct: 61 RRYGVDAAILFSDILVVPQALDVRVEMPGGRGIVVPEPLTTGPALLEAAKKAAADPAALV 120
Query: 117 LNYLLPIFQSISILRKK---LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
L + +++S +R TL+GF APWT+ Y + GG ++ FA N
Sbjct: 121 AKRLNHVTRAVSEIRSAQLAEDLDRTLLGFSAAPWTLLFYTV-GGSSRNQPPGIDFARAN 179
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV 233
+ +L+ +D+ EY+ AQ+ AG +Q+F+ LG H+FE A + + + +
Sbjct: 180 PDETHAMLEAYTDLVVEYMSAQVDAGAHALQVFEAMGMTLGRHDFEVLALPHLESLATKL 239
Query: 234 RRKYPNAKFISFAKGAG--YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLD 290
+ ++P+ + FA+G + + + I LD + + + G +QGNLD
Sbjct: 240 KARHPDVPLLVFARGVEDPAGVNAKLQSFGYDVITLDTAADRAASRSSLGAGQVLQGNLD 299
Query: 291 PMRLVV---GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P L+ + D + A+L LG I NLG G+ + D V V V +
Sbjct: 300 PKLLLADGSSEAKLHDELEAMLRALGPDKLIANLGEGLMGKEDQGLVNAFVDDVHATS 357
>gi|260941360|ref|XP_002614846.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851269|gb|EEQ40733.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 274
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 12/270 (4%)
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + +E +GP DP+ + L L F++I++ R KL + L+G
Sbjct: 1 MGFEIEMIEGKGPVFVDPLRSPADLSRVQMKPDILTSLDWAFKAITLTRTKLNGRVPLLG 60
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
FCGAPWT+ YM G K + + Y+ ++ + LL ++D E+L Q+ AG +
Sbjct: 61 FCGAPWTLLVYMTEGQGSKMFRFAKQWLYEYTQESHKLLQAITDACIEFLAQQVVAGAQM 120
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN------AKFISFAKGAGYMLKNY 256
+Q+F++ AG LG HEF + + +I S + + FAKGA Y L +
Sbjct: 121 LQVFESWAGELGPHEFAEFCLPYLRQIASKLPLRLKELGVEEKIPLTVFAKGAWYALDDL 180
Query: 257 RRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ + + LDW A+++ +QGNLDP + ++V+ V ++ G
Sbjct: 181 CE-SGYDTVSLDWLYKPEDAVKVVGSRRITLQGNLDPGIMYGTDEVITQKVEQMIKGFGG 239
Query: 315 GP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
G +I N GHG P + P+ + +K
Sbjct: 240 GKQNYIINFGHGTHPFMKPEKIEHFLKECH 269
>gi|89897945|ref|YP_515055.1| uroporphyrinogen decarboxylase [Chlamydophila felis Fe/C-56]
gi|89331317|dbj|BAE80910.1| uroporphyrinogen decarboxylase [Chlamydophila felis Fe/C-56]
Length = 333
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 98/325 (30%), Positives = 153/325 (47%), Gaps = 13/325 (4%)
Query: 16 VINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFS 75
PP+W +RQ GRY+P+YR+++ + + E E TL DAAILF+
Sbjct: 11 EAQRPPVWFLRQVGRYMPQYRELK-GSQTLKAFFHNTEAITEATLLGPSLLKVDAAILFA 69
Query: 76 DILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DIL + D F P QE + +YLL +SI L K+L
Sbjct: 70 DILSLLDGFDIPYDFAPGPKISFSP---QEELRFTKDPQDTFSYLL---ESIRNLVKRL- 122
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LI F +P+T+ASY++ GG KD + F YQ+ F+ LL+ L + + YL Q
Sbjct: 123 -SVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQHPEKFDALLNKLIEGTIIYLKEQ 181
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
IHAG IQ+F++ + L F +Y R+IS +++ + +A F + +
Sbjct: 182 IHAGASAIQLFESSSLRLPSALFSHYVTSPNARLISQLKQ-HVSAPVSLFCRCFDENCLD 240
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
T ++ + D+ V L+ + G +QGN+DP ++ + + L L
Sbjct: 241 LYA-TGADTLHPDYHVNLNKIYTTVPYPGSLQGNIDPALFLLPQDRFLSYLEKYLSSLKH 299
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLV 338
P +IFN GHGI P+ +NV V
Sbjct: 300 QPNYIFNTGHGILPETPLENVQAAV 324
>gi|62185447|ref|YP_220232.1| uroporphyrinogen decarboxylase [Chlamydophila abortus S26/3]
gi|81312404|sp|Q5L510|DCUP_CHLAB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|62148514|emb|CAH64285.1| putative uroporphyrinogen decarboxylase [Chlamydophila abortus
S26/3]
Length = 333
Score = 272 bits (695), Expect = 7e-71, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 17/327 (5%)
Query: 16 VINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFS 75
+ PP+W +RQ GRY+P+YR+++ + D + E E TL DAAILF+
Sbjct: 11 KASRPPVWFLRQVGRYMPQYRELK-GSQTLKDFFHNTEAITEATLLGPSLLKVDAAILFA 69
Query: 76 DILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DIL + D + F P +E + + +YLL ++I L K+L
Sbjct: 70 DILSLLDGFNISYDFAPGPQISFSP---KEELIFTNDPQDTFSYLL---KAIKNLVKRL- 122
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LI F +P+T+A Y++ GG KD + F YQ+ F+ LL L++ + YL Q
Sbjct: 123 -SVPLIAFAASPFTMACYLLEGGASKDFPKTMAFLYQHPERFDALLKQLAEATVIYLKEQ 181
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
I AG IQ+F++ + L F Y R ++I+ ++ + F + +N
Sbjct: 182 IQAGASAIQLFESSSLRLPSALFSRYVTRPNTQLITQLKNSVSS-PISLFCRC---FDEN 237
Query: 256 YRRL--TDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ L T ++ + D+ V L + G +QGN+DP ++ ++ + L VL
Sbjct: 238 FIDLYSTGADTLHPDYHVNLSQIYTAVTHPGSLQGNIDPALFLLPQDQFLNHLEKYLSVL 297
Query: 313 GSGP-FIFNLGHGITPQVDPKNVLDLV 338
P +IFN GHGI P+ +NV V
Sbjct: 298 KHQPKYIFNSGHGILPETPLENVQAAV 324
>gi|330443886|ref|YP_004376872.1| Uroporphyrinogen decarboxylase [Chlamydophila pecorum E58]
gi|328806996|gb|AEB41169.1| Uroporphyrinogen decarboxylase [Chlamydophila pecorum E58]
Length = 330
Score = 270 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 98/335 (29%), Positives = 165/335 (49%), Gaps = 18/335 (5%)
Query: 12 LQGNVINPPPIWLMRQAGRYLPEYRQIRKK--FKNFLDMCYTPEYTVELTLQPIRRYNFD 69
LQ + PP+W +RQ GRY+P+Y +++ K+F + PE +E TL + D
Sbjct: 7 LQRQAPHRPPVWFLRQVGRYMPQYHELKGSQPLKSFF---HNPEAIIEATLLGPELLHVD 63
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISI 129
AAILF+DIL I D + F + GP+++ TQ ++ P + YL ++IS
Sbjct: 64 AAILFADILSILDGFCLSYDF--SPGPKIEFSPTQPLF-FTPEPEETFRYLT---EAIST 117
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
L +L + L+GF +P+T+ASY++ GG KD + F Y+ F LLD L + +A
Sbjct: 118 LTSRL--SVPLLGFAASPFTLASYLLDGGASKDFSKTMAFLYRYPEKFQELLDTLINSTA 175
Query: 190 EYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA 249
YL Q+ AG +Q+F++ + L F Y +I+ ++ K F +
Sbjct: 176 IYLELQVRAGASAVQLFESSSLRLPSALFSQYVTEPNKALIAKLKEK--QIPVSLFCRCF 233
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVNAI 308
T ++ + D+ + L+ ++ +G QGN DP ++ ++ +
Sbjct: 234 EENFSKLLD-TQADTLHPDYHIDLARFAKVAPKGLSFQGNFDPALFLLPEPLLDTYLETF 292
Query: 309 LDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
L+ L P +IFN GHGI P+ +NV ++ V+
Sbjct: 293 LESLRFLPNYIFNSGHGILPETPLENVQHVIAYVQ 327
>gi|296438153|gb|ADH20314.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/11074]
Length = 334
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 100/330 (30%), Positives = 159/330 (48%), Gaps = 17/330 (5%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
PPIW +RQ GRY+P+Y++++ + ++ D E VE TL DAAI+F+DI
Sbjct: 14 QRPPIWFLRQVGRYIPQYQELK-RNRSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADI 72
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
L I + + RF P E + + ++LL ++I L K+L
Sbjct: 73 LSILEGFSVDYRFAPGPEVSYSP---HEPLIFTKDPQETFSFLL---EAIQQLTKRL--T 124
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F +P+T+ASY+I GG +D+ + F YQ F LLD ++ +A YL Q+
Sbjct: 125 VPLIAFAASPFTLASYLIEGGASRDYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQ 184
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG IQ+F++ + L H F Y ++I +++ N F + + +
Sbjct: 185 AGAAAIQLFESSSLRLPPHLFAKYVVAPNTKLIRQIKQT-GNPPISLFCRC---FYQEFL 240
Query: 258 RL--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L ++ + D+ V L ++ G +QGN DP L++ +I + A L L
Sbjct: 241 SLYAIGADTLHPDYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLEAYLAPLKQ 300
Query: 315 GPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI PQ +NV +V + S
Sbjct: 301 QSHYIFNLGHGILPQTPIENVQAVVSCLTS 330
>gi|15605480|ref|NP_220266.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis D/UW-3/CX]
gi|76789488|ref|YP_328574.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis A/HAR-13]
gi|166154089|ref|YP_001654207.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 434/Bu]
gi|166154964|ref|YP_001653219.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803177|ref|YP_002888371.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/Jali20/OT]
gi|237805098|ref|YP_002889252.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311579|ref|ZP_05354149.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 6276]
gi|255317880|ref|ZP_05359126.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 6276s]
gi|301335294|ref|ZP_07223538.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis L2tet1]
gi|8928065|sp|O84752|DCUP_CHLTR RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|123606617|sp|Q3KKU6|DCUP_CHLTA RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058016|sp|B0B8X3|DCUP_CHLT2 RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|238058018|sp|B0BAK2|DCUP_CHLTB RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|3329207|gb|AAC68342.1| Uroporphyrinogen Decarboxylase [Chlamydia trachomatis D/UW-3/CX]
gi|76168018|gb|AAX51026.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis A/HAR-13]
gi|165930077|emb|CAP03560.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 434/Bu]
gi|165930952|emb|CAP06514.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273398|emb|CAX10313.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274411|emb|CAX11206.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis B/Jali20/OT]
gi|296436294|gb|ADH18468.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/9768]
gi|296437223|gb|ADH19393.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/11222]
gi|297140654|gb|ADH97412.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis G/9301]
gi|297748877|gb|ADI51423.1| Uroporphyrinogen decarboxylase [Chlamydia trachomatis D-EC]
gi|297749757|gb|ADI52435.1| Uroporphyrinogen decarboxylase [Chlamydia trachomatis D-LC]
Length = 336
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 100/330 (30%), Positives = 159/330 (48%), Gaps = 17/330 (5%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
PPIW +RQ GRY+P+Y++++ + ++ D E VE TL DAAI+F+DI
Sbjct: 16 QRPPIWFLRQVGRYIPQYQELK-RNRSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADI 74
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
L I + + RF P E + + ++LL ++I L K+L
Sbjct: 75 LSILEGFSVDYRFAPGPEVSYSP---HEPLIFTKDPQETFSFLL---EAIQQLTKRL--T 126
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F +P+T+ASY+I GG +D+ + F YQ F LLD ++ +A YL Q+
Sbjct: 127 VPLIAFAASPFTLASYLIEGGASRDYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQ 186
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG IQ+F++ + L H F Y ++I +++ N F + + +
Sbjct: 187 AGAAAIQLFESSSLRLPPHLFAKYVVAPNTKLIRQIKQT-GNPPISLFCRC---FYQEFL 242
Query: 258 RL--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L ++ + D+ V L ++ G +QGN DP L++ +I + A L L
Sbjct: 243 SLYAIGADTLHPDYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLEAYLAPLKQ 302
Query: 315 GPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI PQ +NV +V + S
Sbjct: 303 QSHYIFNLGHGILPQTPIENVQAVVSCLTS 332
>gi|29840635|ref|NP_829741.1| uroporphyrinogen decarboxylase [Chlamydophila caviae GPIC]
gi|38257421|sp|Q821R0|DCUP_CHLCV RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|29834985|gb|AAP05619.1| uroporphyrinogen decarboxylase [Chlamydophila caviae GPIC]
Length = 333
Score = 267 bits (684), Expect = 2e-69, Method: Composition-based stats.
Identities = 93/325 (28%), Positives = 151/325 (46%), Gaps = 13/325 (4%)
Query: 16 VINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFS 75
PP+W +RQ GRY+P+Y++++ + + E E TL DAAILF+
Sbjct: 11 KTARPPVWFLRQVGRYMPQYKELK-GSQTLKAFFHNTEAITEATLLGPSLLKVDAAILFA 69
Query: 76 DILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLP 135
DIL + D + F P E + + +YLL Q+I L K L
Sbjct: 70 DILSLLDGFNISYDFSPGPQISFSP---YEELIFTKDPQETFSYLL---QAIKNLVKAL- 122
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ LI F +P+T+ASY++ GG KD + F YQ F+ LL L++ + YL Q
Sbjct: 123 -DVPLIAFAASPFTMASYLLDGGASKDFPKTMAFLYQYPDKFDALLKKLTEGTVIYLKEQ 181
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
IHAG IQ+F++ + L F Y ++IS +++ + F + +
Sbjct: 182 IHAGAAAIQLFESSSLRLPSELFSRYVTAPNTQLISQLKQ-CIASPISLFCRCFDENFLD 240
Query: 256 YRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
+ ++ + D+ V L+ + + G +QGN+DP ++ ++ + L L
Sbjct: 241 LYSI-GADTLHPDYHVNLNKIYKTVPQPGSLQGNIDPTLFLLPQDQLLAHLEKYLTTLKD 299
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLV 338
P +IFN GHGI P+ +NV V
Sbjct: 300 QPNYIFNSGHGILPETPLENVQAAV 324
>gi|329943214|ref|ZP_08291988.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci Cal10]
gi|313848366|emb|CBY17370.1| putative uroporphyrinogen decarboxylase [Chlamydophila psittaci
RD1]
gi|328814761|gb|EGF84751.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci Cal10]
gi|328915052|gb|AEB55885.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
Length = 333
Score = 265 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 95/325 (29%), Positives = 159/325 (48%), Gaps = 17/325 (5%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
+ PP+W +RQ GRY+P+YR+++ + + + E TL DAAILF+DI
Sbjct: 13 SRPPVWFLRQVGRYMPQYRELK-GSQTLKAFFHNTDAITEATLLGPSLLKVDAAILFADI 71
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
L + D + F P +E + + +YLL ++I L K+L
Sbjct: 72 LSLLDGFNISYDFAPGPQISFSP---EEELVFTKDPQDTFSYLL---EAIKNLVKRL--S 123
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F +P+T+A Y++ GG KD + F YQ+ + F+ LL L++ + YL QIH
Sbjct: 124 VPLIAFAASPFTMACYLLDGGASKDFPRTMAFLYQHPKRFDALLKQLAEGTVIYLKEQIH 183
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG IQ+F++ + L F Y ++I+ ++ + ++ F + +N+
Sbjct: 184 AGASAIQLFESSSLRLPSALFSRYVTLPNTQLIAQLKN-HVSSPISLFCRC---FDENFI 239
Query: 258 RL--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L T ++ + D+ V LS + G +QGN+DP ++ ++ + L VL
Sbjct: 240 DLYSTGADTLHPDYHVNLSKIYTSVTDPGSLQGNIDPALFLLPQDQFLNHLEKYLSVLKH 299
Query: 315 GP-FIFNLGHGITPQVDPKNVLDLV 338
P +IFN GHGI P+ +NV V
Sbjct: 300 QPKYIFNSGHGILPETPLENVQAAV 324
>gi|255349142|ref|ZP_05381149.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 70]
gi|255503679|ref|ZP_05382069.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis 70s]
gi|255507359|ref|ZP_05382998.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis D(s)2923]
gi|289525791|emb|CBJ15272.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis Sweden2]
gi|296435367|gb|ADH17545.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis E/150]
gi|296439084|gb|ADH21237.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis E/11023]
Length = 336
Score = 265 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 99/330 (30%), Positives = 158/330 (47%), Gaps = 17/330 (5%)
Query: 18 NPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
PPIW +RQ GRY+P+Y++++ + ++ D E VE TL DAAI+F+DI
Sbjct: 16 QRPPIWFLRQVGRYIPQYQELK-RNRSLKDFFLDTESIVEATLLGPSLLGVDAAIVFADI 74
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
L I + + RF P E + + ++LL ++I L K+L
Sbjct: 75 LSILEGFSVDYRFAPGPEVSYSP---HEPLIFTKDPQETFSFLL---EAIQQLTKRL--T 126
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ LI F +P+T+ASY+I GG + + + F YQ F LLD ++ +A YL Q+
Sbjct: 127 VPLIAFAASPFTLASYLIEGGASRGYPKTIAFLYQYPDRFKALLDEITLGTATYLQMQVQ 186
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR 257
AG IQ+F++ + L H F Y ++I +++ N F + + +
Sbjct: 187 AGAAAIQLFESSSLRLPPHLFAKYVVAPNTKLIRQIKQT-GNPPISLFCRC---FYQEFL 242
Query: 258 RL--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
L ++ + D+ V L ++ G +QGN DP L++ +I + A L L
Sbjct: 243 SLYAIGADTLHPDYHVELPEVYRQIHSPGSIQGNFDPALLLLPQDALIAHLEAYLAPLKQ 302
Query: 315 GPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI PQ +NV +V + S
Sbjct: 303 QSHYIFNLGHGILPQTPIENVQAVVSCLTS 332
>gi|301335325|ref|ZP_07223569.1| uroporphyrinogen decarboxylase [Chlamydia trachomatis L2tet1]
gi|301336311|ref|ZP_07224513.1| uroporphyrinogen decarboxylase [Chlamydia muridarum MopnTet14]
Length = 339
Score = 262 bits (671), Expect = 4e-68, Method: Composition-based stats.
Identities = 95/329 (28%), Positives = 153/329 (46%), Gaps = 17/329 (5%)
Query: 19 PPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDIL 78
PP+WL+RQ GRY+P+Y++++K ++ E VE +L DAAI+F+DIL
Sbjct: 20 RPPVWLLRQVGRYMPQYQELKKNRP-LKEVFLDTESIVEASLLGPSLLGVDAAIVFADIL 78
Query: 79 VIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
I + +F P L + ++I +L K+L +
Sbjct: 79 SILEGFAVEYQFAPGPEIVYSP------QQPLVFTKEPLAVFSFLLEAIQLLTKRL--TV 130
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LI F +P+T+ASY++ GG KD + F Y+ F LLD + +A YL Q+ A
Sbjct: 131 PLIAFAASPFTLASYLLEGGAAKDCSKTMAFLYRYPDRFQTLLDEIIKGTAVYLQLQVQA 190
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+F++ + L F Y ++I +++ N F + + +
Sbjct: 191 GATAVQLFESSSLRLPPSLFSQYVVTPNTKLIRQIKQDR-NPPISLFCRC---FYQEFLS 246
Query: 259 L--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L T ++ + D+ V L +L G +QGN DP L++ ++I + A L L
Sbjct: 247 LYATGADTLHPDYHVELPEVYRQLGNPGSIQGNFDPAFLLLPQDMLIKHLEAYLAPLKEQ 306
Query: 316 PF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI PQ +NV +V + S
Sbjct: 307 SHYIFNLGHGILPQTPLENVQAVVSCLTS 335
>gi|15618799|ref|NP_225085.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae CWL029]
gi|15836423|ref|NP_300947.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae J138]
gi|16752146|ref|NP_445513.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae AR39]
gi|33242252|ref|NP_877193.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae TW-183]
gi|8928080|sp|Q9Z716|DCUP_CHLPN RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|4377209|gb|AAD19028.1| Uroporphyrinogen Decarboxylase [Chlamydophila pneumoniae CWL029]
gi|7189889|gb|AAF38756.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae AR39]
gi|8979264|dbj|BAA99098.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae J138]
gi|33236763|gb|AAP98850.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae TW-183]
Length = 329
Score = 262 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++L+ + PPIWL+RQ GRY+P Y++++ ++ + E VE TL +
Sbjct: 4 FFDLLKSQTASHPPIWLLRQVGRYMPPYQELK-GSQSLKTFFHNTEAIVEATLLGPSLLH 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILF+DIL I D F + P ++ + + +YLL +I
Sbjct: 63 VDAAILFADILSILDGFAVTYDFAPGPRIQFSP---EQPFTFTSDPQTIFSYLL---DAI 116
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L++KLP + LI F +P+T+A Y+I GG KD + F Y F+ L+ + +
Sbjct: 117 RTLKQKLP--VPLIVFAASPFTLACYLIDGGASKDFSKTMSFLYVYPEKFDQLISTIIEG 174
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+A YL Q+ AG +Q+F++ + L F Y R+I+ ++ + F +
Sbjct: 175 TAIYLKTQMDAGAAAVQLFESSSLRLPSALFTRYVTEPNRRLIAKLKEQA--IPVSLFCR 232
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
+ T ++ + D+ V L + +QGNLDP ++ + ++ V A
Sbjct: 233 CFEENFYTL-QATQADTLHPDYHVDLHRIQKNLM-LSLQGNLDPAIFLLPQEKLLHYVEA 290
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L L + P FIFN GHGI P+ +NV +V V+ +
Sbjct: 291 FLVPLRTYPNFIFNSGHGILPETPLENVQLVVSYVQRQ 328
>gi|45655597|ref|YP_003406.1| uroporphyrinogen decarboxylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294653591|ref|NP_714560.2| uroporphyrinogen decarboxylase [Leptospira interrogans serovar Lai
str. 56601]
gi|45602568|gb|AAS72043.1| uroporphyrinogen decarboxylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293630694|gb|AAN51575.2| uroporphyrinogen decarboxylase [Leptospira interrogans serovar Lai
str. 56601]
Length = 340
Score = 261 bits (668), Expect = 9e-68, Method: Composition-based stats.
Identities = 93/346 (26%), Positives = 155/346 (44%), Gaps = 20/346 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ VL G PP+W+MRQAGRY Y+ +R K+ +F ++C P+ E+ P+
Sbjct: 3 NERYTNVLNGIAQKIPPVWMMRQAGRYHKHYQTLRTKY-SFEELCKNPDLAAEVAYGPVD 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
++FD AILFSDIL +ALG +R+ ++ GP +D I ++E +++ ++++
Sbjct: 62 EFDFDVAILFSDILFPLEALGMGLRYTDS-GPVLDLEIRSKEDLNKLKSVEDSISFMQFQ 120
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++I +KLP +LIGF G PWT+ +Y + G + + L+
Sbjct: 121 KKAIQRTLEKLPKEKSLIGFVGGPWTLFTYAVCGKHEGNLFLPKTLT----EVRKEFLEK 176
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ E + Q+ G ++I IFDT G L F + + YP K
Sbjct: 177 IIQFLKENISIQLEGGAELILIFDTAGGDLSPELFREIVIPGIK----TLSDFYPG-KVG 231
Query: 244 SFAKGAGY-MLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
+ +G + R +T G D L + + +QGN D L +G +
Sbjct: 232 YYGRGTSSIHFEMIREITTLAGFGFDHRWNLREIFKTESRM-IQGNFDQSLLFLGKEEFK 290
Query: 303 DGVNAILDVLGSGP------FIFNLGHGITPQVDPKNVLDLVKTVR 342
+ L P ++ LGHG+ P+ NV V+ VR
Sbjct: 291 KILMNYLKPFRELPPAERIGWVCGLGHGVMPKTPEYNVKTFVEIVR 336
>gi|269302678|gb|ACZ32778.1| uroporphyrinogen decarboxylase [Chlamydophila pneumoniae LPCoLN]
Length = 329
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/338 (28%), Positives = 162/338 (47%), Gaps = 14/338 (4%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++L+ + PPIWL+RQ GRY+P Y++++ ++ + E VE TL +
Sbjct: 4 FFDLLKSQTASHPPIWLLRQVGRYMPPYQELK-GSQSLKTFFHNTEAIVEATLLGPSLLH 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAILF+DIL I D F + P ++ + + +YLL +I
Sbjct: 63 VDAAILFADILSILDGFAVTYDFAPGPRIQFFP---EQPFTFTSDPQTIFSYLL---DAI 116
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L++KLP + LI F +P+T+A Y+I GG KD + F Y F+ L+ + +
Sbjct: 117 RTLKQKLP--VPLIVFAASPFTLACYLIDGGASKDFSKTMSFLYAYPEKFDQLISTIIEG 174
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+A YL Q+ AG +Q+F++ + L F Y R+I+ ++ + F +
Sbjct: 175 TAIYLKTQMDAGAAAVQLFESSSLRLPSALFTRYVTEPNRRLIAKLKEQA--IPVSLFCR 232
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNA 307
+ T ++ + D+ V L + +QGNLDP ++ + ++ V A
Sbjct: 233 CFEENFYTL-QATQADTLHPDYHVDLHRIQKNLMP-SLQGNLDPAIFLLPQEKLLHYVEA 290
Query: 308 ILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L L + P FIFN GHGI P+ +NV +V V+ +
Sbjct: 291 FLVPLRTYPNFIFNSGHGILPETPLENVQLVVSYVQRQ 328
>gi|15834747|ref|NP_296506.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
gi|270284914|ref|ZP_06194308.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
gi|270288941|ref|ZP_06195243.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Weiss]
gi|13878473|sp|Q9PLH7|DCUP_CHLMU RecName: Full=Uroporphyrinogen decarboxylase; Short=UPD;
Short=URO-D
gi|7190158|gb|AAF39001.1| uroporphyrinogen decarboxylase [Chlamydia muridarum Nigg]
Length = 334
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/329 (29%), Positives = 154/329 (46%), Gaps = 17/329 (5%)
Query: 19 PPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDIL 78
PP+WL+RQ GRY+P+Y++++ ++ E +E TL DAAI+F+DIL
Sbjct: 15 RPPVWLLRQVGRYMPQYQELKTNRP-LKELFLDTESIIEATLLGPSLLGVDAAIVFTDIL 73
Query: 79 VIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
I + RF P + + + ++I L K+L +
Sbjct: 74 SILEGFAIEYRFAPGPEIIYSPHQPFVF------TEDPFSTFSFLIEAIQKLTKRL--TV 125
Query: 139 TLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA 198
LI F +P+T+ASY+I GG KD + F YQ F LL+ + +A YL Q+ A
Sbjct: 126 PLIAFAASPFTLASYLIEGGASKDCSKTIAFLYQYPDKFEALLNEIIKGTAIYLQLQVQA 185
Query: 199 GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
G +Q+F++ + L F Y ++I ++++ N F + + +
Sbjct: 186 GASAVQLFESSSLRLPPSLFSKYVVSPNAKLIRLIKQR-ENPPVSLFCRC---FYQEFLS 241
Query: 259 L--TDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
L T ++ + D+ V LS +L G +QGN DP L++ ++I + L L
Sbjct: 242 LYATGADTLHPDYHVELSEIYRQLGDPGSIQGNFDPALLLLPQDLLIAHLETYLAPLKQQ 301
Query: 316 PF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
IFNLGHGI PQ +NV +VK + S
Sbjct: 302 SHYIFNLGHGILPQTPLENVQAVVKCLTS 330
>gi|116332460|ref|YP_802177.1| uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116127327|gb|ABJ77419.1| Uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 340
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/346 (25%), Positives = 158/346 (45%), Gaps = 20/346 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ + G PP+W+MRQAGRY Y+ +R+K+ F ++C PE E+ P+
Sbjct: 4 KRYSNAISGVAQKIPPVWMMRQAGRYHKHYQTLRQKY-TFEELCKNPELAAEVAFGPVDE 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIF 124
++FD AILFSDIL +ALG +R+ + GP ++ I +++ ++ ++++
Sbjct: 63 FDFDVAILFSDILFSLEALGMGLRYTDA-GPVLNFSIRSEKDLKKLKPVEDSISFMQFQK 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + R+++P ++IGF G PWT+ +Y +SG + ++ N L+ +
Sbjct: 122 KAMHLTRERIPEDKSVIGFVGGPWTLFTYAVSGKHEGNLSLPKILT----DVRNEFLEKI 177
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
E + Q+ G +++ IFDT G L F + + YP K
Sbjct: 178 IRFLRENISLQLEGGAELVMIFDTAGGDLSPELFREIVIPGIK----ILADSYPG-KVGY 232
Query: 245 FAKG-AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ KG + +R+ G D L + +K VQGN D L + +
Sbjct: 233 YGKGTTSPHFQAVQRIPTLAGFGFDHRWDLKEIFKNEKRM-VQGNFDQNLLFMEKEEFKR 291
Query: 304 GVNAILDVLG------SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + L ++ LGHG+ P+ +NV V+ VR
Sbjct: 292 TLKSYLMPYRDLSPEERIGWVCGLGHGVMPKTPEENVKSFVEIVRE 337
>gi|116329571|ref|YP_799290.1| uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116122464|gb|ABJ80357.1| Uroporphyrinogen decarboxylase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 340
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 89/346 (25%), Positives = 159/346 (45%), Gaps = 20/346 (5%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ + G PP+W+MRQAGRY Y+ +R+K+ F ++C PE E+ P+
Sbjct: 4 KRYSNAISGVAQKIPPVWMMRQAGRYHKHYQTLRQKY-TFEELCKNPELAAEVAFGPVDE 62
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIF 124
++FD AILFSDIL +ALG +R+ + GP ++ I +++ ++ ++++
Sbjct: 63 FDFDVAILFSDILFSLEALGMGLRYTDA-GPVLNFSIRSEKDLKKLKPVEDSISFMQFQK 121
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ + R+++P ++IGF G PWT+ +Y +SG + ++ N L+ +
Sbjct: 122 KAMHLTRERIPEDKSVIGFVGGPWTLFTYAVSGKHEGNLSLPKILT----DVRNEFLEKI 177
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
E + Q+ G +++ IFDT G L F + + YP K
Sbjct: 178 IRFLRENISLQLEGGAELVMIFDTAGGDLSPELFREIVIPGIK----ILADSYPG-KVGY 232
Query: 245 FAKG-AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+ KG A + +R+ G D L + +K VQGN D L + +
Sbjct: 233 YGKGTASPHFQAVQRIPTLAGFGFDHRWDLKEIFKNEKRM-VQGNFDQNLLFMEKEEFKR 291
Query: 304 GVNAILDVLG------SGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + L ++ LGHG+ P+ +NV V+ VR
Sbjct: 292 TLKSYLMPYRDLSPEERIGWVCGLGHGVMPKTPEENVKSFVEIVRE 337
>gi|116110650|gb|ABJ74704.1| Updo [Drosophila pseudoobscura]
gi|116110652|gb|ABJ74705.1| Updo [Drosophila miranda]
gi|116110654|gb|ABJ74706.1| Updo [Drosophila miranda]
gi|116110656|gb|ABJ74707.1| Updo [Drosophila miranda]
gi|116110658|gb|ABJ74708.1| Updo [Drosophila miranda]
gi|116110660|gb|ABJ74709.1| Updo [Drosophila miranda]
gi|116110662|gb|ABJ74710.1| Updo [Drosophila miranda]
gi|116110664|gb|ABJ74711.1| Updo [Drosophila miranda]
gi|116110666|gb|ABJ74712.1| Updo [Drosophila miranda]
gi|116110668|gb|ABJ74713.1| Updo [Drosophila miranda]
gi|116110670|gb|ABJ74714.1| Updo [Drosophila miranda]
gi|116110672|gb|ABJ74715.1| Updo [Drosophila miranda]
gi|116110674|gb|ABJ74716.1| Updo [Drosophila miranda]
gi|116110676|gb|ABJ74717.1| Updo [Drosophila miranda]
gi|116110678|gb|ABJ74718.1| Updo [Drosophila miranda]
gi|116110680|gb|ABJ74719.1| Updo [Drosophila miranda]
gi|116110682|gb|ABJ74720.1| Updo [Drosophila miranda]
gi|116110684|gb|ABJ74721.1| Updo [Drosophila miranda]
gi|116110686|gb|ABJ74722.1| Updo [Drosophila miranda]
Length = 254
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 126/256 (49%), Gaps = 9/256 (3%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLK-RLTPDGALSRLT 59
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 60 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFL 119
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + +F +A + RI + ++
Sbjct: 120 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEDFLLWAVPYLRRIRDELVDRLTKKA 179
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 180 VPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMY 238
Query: 296 VGNQVMIDGVNAILDV 311
+ ++
Sbjct: 239 RDADELRALTTEMVHK 254
>gi|116110688|gb|ABJ74723.1| Updo [Drosophila miranda]
gi|116110690|gb|ABJ74724.1| Updo [Drosophila miranda]
gi|116110692|gb|ABJ74725.1| Updo [Drosophila miranda]
gi|116110694|gb|ABJ74726.1| Updo [Drosophila miranda]
gi|116110696|gb|ABJ74727.1| Updo [Drosophila miranda]
gi|116110698|gb|ABJ74728.1| Updo [Drosophila miranda]
gi|116110700|gb|ABJ74729.1| Updo [Drosophila miranda]
gi|116110702|gb|ABJ74730.1| Updo [Drosophila miranda]
gi|116110704|gb|ABJ74731.1| Updo [Drosophila miranda]
gi|116110706|gb|ABJ74732.1| Updo [Drosophila miranda]
gi|116110708|gb|ABJ74733.1| Updo [Drosophila miranda]
gi|116110710|gb|ABJ74734.1| Updo [Drosophila miranda]
gi|116110712|gb|ABJ74735.1| Updo [Drosophila miranda]
gi|116110714|gb|ABJ74736.1| Updo [Drosophila miranda]
gi|116110716|gb|ABJ74737.1| Updo [Drosophila miranda]
gi|116110718|gb|ABJ74738.1| Updo [Drosophila miranda]
gi|116110720|gb|ABJ74739.1| Updo [Drosophila miranda]
gi|116110722|gb|ABJ74740.1| Updo [Drosophila miranda]
Length = 254
Score = 254 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 9/256 (3%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+RR++ DA+I+FSDILVI ALG V GP + PI T E L D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLKLL-TPDGALSRLT 59
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 60 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLSDHPEDTKLFL 119
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + F +A + RI + ++
Sbjct: 120 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEHFLLWAVPYLRRIRDELVDRLTKKA 179
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V A + +QGNLDP +
Sbjct: 180 VPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPIEARALVGPNITLQGNLDPQDMY 238
Query: 296 VGNQVMIDGVNAILDV 311
+ ++
Sbjct: 239 RDADELRALTTEMVHK 254
>gi|116110648|gb|ABJ74703.1| Updo [Drosophila affinis]
Length = 254
Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 9/256 (3%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLL 121
+RR++ DA+I+FSDILVI ALG V GP + PI T E D L+ L
Sbjct: 1 LRRFDLDASIIFSDILVIPQALGLTVEMHAGVGPVLPQPINTPEDLK-RLTPDGALSRLT 59
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +I+++R KL + LIGF GAPWT+ YMI GG K + + + + L
Sbjct: 60 YVGDAITMMRHKLEGRVPLIGFTGAPWTLMGYMIEGGGSKTMSKAKAWLADHPEDTRLFL 119
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAV-----RRK 236
+ L+D +YL Q+ AG ++Q+F++ A L + EF +A + RI + ++
Sbjct: 120 NLLTDAIVDYLEMQVKAGAQMLQVFESSAEHLTKEEFLIWAVPYLRRIRDELVDRLTKKA 179
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV 295
P FAKGAG+ LK L + IGLDW+V A ++ +QGNLDP +
Sbjct: 180 VPLVPITLFAKGAGHSLKEQSEL-GYDVIGLDWTVDPVEARAQVGPNITLQGNLDPQDMY 238
Query: 296 VGNQVMIDGVNAILDV 311
+ ++
Sbjct: 239 RDADELRTLTTEMVHK 254
>gi|323943614|gb|EGB39722.1| uroporphyrinogen decarboxylase [Escherichia coli H120]
Length = 200
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
M+ GG K + Y + +A + LLD L+ YL AQI AG + IFDT G L
Sbjct: 1 MVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVL 60
Query: 214 GEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+++ ++ + +I+ + R+ F KG G L+ T +A+GLDW+
Sbjct: 61 TGRDYQQFSLYYMHKIVDGLVRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTT 119
Query: 272 PLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQV 329
++ A + + +QGN+DP L + + V IL G G +FNLGHGI V
Sbjct: 120 DIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDV 179
Query: 330 DPKNVLDLVKTVR 342
P++ V+ V
Sbjct: 180 PPEHAGVFVEAVH 192
>gi|183220563|ref|YP_001838559.1| uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910673|ref|YP_001962228.1| uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775349|gb|ABZ93650.1| Uroporphyrinogen decarboxylase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778985|gb|ABZ97283.1| Uroporphyrinogen decarboxylase (URO-D; UPD) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 347
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 83/345 (24%), Positives = 152/345 (44%), Gaps = 17/345 (4%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ +Q + PPIW MRQAGRY YR++++ + +F+++C PE E+ L P++
Sbjct: 8 NERFANAIQLVPQDVPPIWFMRQAGRYHSHYRKLKETY-SFMELCKEPELAAEVALGPVK 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
+ FD +ILFSD+L +ALG + + + ++ L P ++ + L+
Sbjct: 67 EFGFDVSILFSDLLFPLEALGMGLTYDPGPKLSFSLTSITDLNKLKP-VEEAIEGLVFQK 125
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q++ R+ LP ++LIGF G P+T+ +Y G + + N + L
Sbjct: 126 QAVIRTREVLPKDVSLIGFVGGPFTLMTYASIGKHDGNLSFIK----TNQNFVDEFYTIL 181
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ + + Q+ G +V+ +FDT AG L + F Y A + + + +PN
Sbjct: 182 LPLLKKNIELQLQGGAEVVMMFDTAAGMLDPNNFRRYVAEPIAE----LTKTFPNQIGYY 237
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMID 303
++ ++ D G+D + L E +G +QGN D L +
Sbjct: 238 AKNSTEEHIRQIHKIPDLVGFGVDHRFSIPNVLHEFGGKGFIQGNFDQELLFADPVTLKH 297
Query: 304 GVNAIL------DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ L D ++ LGHG+ ++ L++ R
Sbjct: 298 KIKEYLLPIKDMDPKDRVGWVAGLGHGVLQFTPEASIHSLIEETR 342
>gi|42524807|ref|NP_970187.1| uroporphyrinogen decarboxylase [Bdellovibrio bacteriovorus HD100]
gi|39577017|emb|CAE78246.1| uroporphyrinogen decarboxylase [Bdellovibrio bacteriovorus HD100]
Length = 339
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 94/347 (27%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
L+ PPIW MRQAGRY Y+ +R +F +C E E+ P+
Sbjct: 2 NTLFHNALKRTPQAVPPIWFMRQAGRYHKHYQGMRAN-HSFDQLCKRAELAAEVARGPVA 60
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
++FD +ILFSDIL +ALG + + + GP++ T E ++ + ++
Sbjct: 61 EFDFDVSILFSDILYPLEALGMGLEYTD-HGPQLGFKLTPETIGTLGGVEEAVKFMHFQK 119
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ R LP++ +LIGF G PWT+ Y + G Q++ A F L+ +
Sbjct: 120 EAVQATRAVLPSNKSLIGFVGGPWTLFVYAVEGSHAGSLIQSKKLA----PMFPQFLEKM 175
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ E + Q+ GV+++ IFDT AG + F+ + + R + + YP K
Sbjct: 176 YPLLKENIRLQLEGGVEIVMIFDTAAGEVSPLFFQEWIQPVLAR----LSQDYPG-KIGY 230
Query: 245 FAKGAGYML--KNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMI 302
++KG + ++ L + G D L +Q +G VQGN D L +
Sbjct: 231 YSKGTQAVFFNDAFKALPWA-GQGFDHRNYLPDCFNIQNKGFVQGNFDQSLLFMDEADFK 289
Query: 303 DGVNAILDVLGS------GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ L + + ++ LGHG+ P+ KNV V TVR
Sbjct: 290 KAMHTYLAPMKNMSKEQRAGWVSGLGHGVLPKTPEKNVKLFVDTVRE 336
>gi|239789762|dbj|BAH71483.1| ACYPI004051 [Acyrthosiphon pisum]
Length = 198
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 81/194 (41%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +IL +G ++ P+W+MRQAGRYLPE+R++R ++ +F +C TPE E+TLQPI
Sbjct: 7 KNDRILRAARGEEVDRIPVWVMRQAGRYLPEFRELRSRY-DFFTICRTPELACEVTLQPI 65
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYLL 121
+RY+ DA+I+FSDILVI ALG V + GP + DP+ ++ LN +ID+ L
Sbjct: 66 QRYDLDASIIFSDILVIVQALGMIVEMQPSVGPVIPDPLKEPIDLDRLNQSIDVK-QELG 124
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+F++I++ R +L + LIGF GAPWT+ YMI GG K + + + Y+ LL
Sbjct: 125 YVFEAITLTRHRLNGQVPLIGFTGAPWTLMCYMIEGGGSKTMSKAKKWLYKYPEESKKLL 184
Query: 182 DFLSDVSAEYLIAQ 195
L+D+ +YLI Q
Sbjct: 185 QILTDIIVKYLIEQ 198
>gi|56417276|ref|YP_154350.1| uroporphyrinogen decarboxylase [Anaplasma marginale str. St.
Maries]
gi|56388508|gb|AAV87095.1| uroporphyrinogen decarboxylase [Anaplasma marginale str. St.
Maries]
Length = 265
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 96/273 (35%), Positives = 146/273 (53%), Gaps = 13/273 (4%)
Query: 78 LVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+V+ DALG V F+ +GP++ I Q + + L P+F+ I +RK L +
Sbjct: 1 MVVLDALGYEVSFIRGQGPKIGNIIHQY------STTESIAKLQPVFEGIRKVRKSLDSD 54
Query: 138 ITLIGFCGAPWTVASYMISGG-----FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
TLIGF G+PWT+ +Y++ KD V + ++ L++ ++D+++ YL
Sbjct: 55 KTLIGFAGSPWTLLTYVLGKENNFLKIRKDICLETVHKHTKNKVT-ELVNRITDLTSHYL 113
Query: 193 IAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
QI +GVDVIQ+FD+ A L FE Y +I+ VR ++PN I F GAG M
Sbjct: 114 AKQIESGVDVIQLFDSSASLLPVEIFEEYVITPTKKIVDFVRVRHPNFPIIGFPMGAGVM 173
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
K Y T +AI +D+S+P S+ E +G +QGNLDP L + I++ L
Sbjct: 174 YKTYLEKTGISAISVDYSIPTSWIKEHL-DGVIQGNLDPSLLAYNQKASDSQSMKIVEEL 232
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G P IFNLGHGI P+ ++V L+++VR
Sbjct: 233 GDKPLIFNLGHGILPETPIQHVESLIRSVRKAS 265
>gi|261885409|ref|ZP_06009448.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 210
Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 112/197 (56%)
Query: 8 ILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYN 67
++ G PIW+MRQAGRYLPEY +R +FL +C + E+TLQP+
Sbjct: 3 FIDACFGKPTPYTPIWMMRQAGRYLPEYMAVRDAAGDFLSLCKDYKKASEVTLQPVDILG 62
Query: 68 FDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
DAAI+FSDILV+ +G ++F++ EGP + L +++ + L ++ +I
Sbjct: 63 VDAAIMFSDILVVPLEMGMELKFIKGEGPVFENPILSMDSLDKLSVEKAVKNLSYVYDTI 122
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ R+KL + LIGFCGAPW++A+YMI GG K + ++ Y N + + +L ++
Sbjct: 123 KLTREKLSSDKALIGFCGAPWSIATYMIEGGSTKTYNISKKMLYDNPQFLHAILRKVTKA 182
Query: 188 SAEYLIAQIHAGVDVIQ 204
YL QI AGV+ +Q
Sbjct: 183 IKLYLEEQIKAGVNAVQ 199
>gi|58699355|ref|ZP_00374126.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534126|gb|EAL58354.1| uroporphyrinogen decarboxylase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 233
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 90/237 (37%), Positives = 136/237 (57%), Gaps = 6/237 (2%)
Query: 42 FKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI 101
NF+++CY + ELTLQP+ R++ DAAI+FSDIL+IAD LG +V FV GP + P+
Sbjct: 1 MNNFMEICYNTDLVTELTLQPVTRFDMDAAIIFSDILIIADVLGCDVNFVRGVGPIIKPV 60
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
+ + LPI +I +R +LP +LIGF G PWTVASY+I GG K
Sbjct: 61 ESPK---ELKGPQEIETKTLPILNAIKKVRSQLPKEKSLIGFAGGPWTVASYIIEGGSSK 117
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ F +++ +++V+ YLI QI G DVIQ+FD++AG L E F+ Y
Sbjct: 118 TFSKVLNF---YPSCLKEIIERITEVTIIYLIKQIEFGADVIQLFDSNAGALSEPLFKEY 174
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE 278
RII A++ ++ + I F + AG + K+Y T +A+ +D++VP+ +A
Sbjct: 175 VIEPTKRIILAIKDRFSDFPIIGFPRSAGNLYKDYCEQTGVSAVSIDYNVPIKWAKA 231
>gi|156030999|ref|XP_001584825.1| hypothetical protein SS1G_14280 [Sclerotinia sclerotiorum 1980]
gi|154700671|gb|EDO00410.1| hypothetical protein SS1G_14280 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 224
Score = 239 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 117/206 (56%), Gaps = 9/206 (4%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ IL G+ + PP+W+MRQAGRYLPEY + + K +F + C +PE LTLQPI
Sbjct: 9 QNDLILRTAWGHKVERPPMWVMRQAGRYLPEYHEAKGK-NDFFECCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRM-----DPITTQEIYLLNPNIDLF 116
R+ DAAI+FSDILVI ALG V V+ +GP P Q +L N+D+
Sbjct: 68 ERFAGLVDAAIIFSDILVIPQALGMTVEMVDKKGPHFPEPLESPYDGQYERVLKKNVDVA 127
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L ++++I++ R KL + L GFCGAPWT+ YM+ GG K + + + Y+ A
Sbjct: 128 AE-LDYVYKAITLTRHKLKGRVPLFGFCGAPWTLLCYMVEGGGSKLFVKTKTWVYKYPEA 186
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDV 202
LL +++V EYL Q+ AG V
Sbjct: 187 SKALLQKIAEVCVEYLALQVKAGAQV 212
>gi|308125692|ref|ZP_07663482.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
gi|308115542|gb|EFO53082.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
Length = 191
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 2/192 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLKEPVDYTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELASEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
LQP+RR+ DAAILFSDIL I DA+G +RF EGP D T + + +
Sbjct: 61 LQPLRRFPLDAAILFSDILTIPDAMGLGLRFAAGEGPVFDNPITCKADVEKIGLPDPEGE 120
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + ++ +RK L + LIGF G+PWT+A+YM+ GG K + + Y +
Sbjct: 121 LQYVMNAVRQIRKDLNGDVPLIGFSGSPWTLATYMVEGGSSKAFTKIKKMMYAEPQLC-I 179
Query: 180 LLDFLSDVSAEY 191
D L+D +Y
Sbjct: 180 STDKLADSVIDY 191
>gi|307110481|gb|EFN58717.1| hypothetical protein CHLNCDRAFT_140365 [Chlorella variabilis]
Length = 261
Score = 238 bits (609), Expect = 7e-61, Method: Composition-based stats.
Identities = 69/241 (28%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKD 162
E +D L+ L + +++S LR ++ L+GF G PWT+A+Y + G ++
Sbjct: 1 MEQVRALAPLDDPLSSLPFVHETLSTLRGEIGGSGAALLGFVGTPWTLAAYSVEGRAERN 60
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
+ + Y + + + LLD L++ Y+ QI AG V+Q+FD+ A L + ++
Sbjct: 61 CRRTKTMMYGSPQVLHALLDHLTEALIVYVGYQIEAGAQVVQLFDSWAHHLTPEQSAEFS 120
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
RII+AVR KYP+ I A G + ++ IGLDW ++ A +
Sbjct: 121 MPYAERIIAAVRAKYPHVPLIFHANGGAGKHAQLAACS-ADVIGLDWECTMAGARQAMGA 179
Query: 283 G-PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G +QGN+DPM L + + V L G I N+GHG+ ++V +
Sbjct: 180 GRTLQGNVDPMVLFGPEAAIREAVTRCLVEAGPHHHILNVGHGVIEGTPEESVGLFCELA 239
Query: 342 R 342
R
Sbjct: 240 R 240
>gi|332749194|gb|EGJ79616.1| uroporphyrinogen decarboxylase family protein [Shigella flexneri
2747-71]
Length = 185
Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGR 228
Y + +A + LLD L+ YL AQI AG + IFDT G L +++ ++ + +
Sbjct: 1 MMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHK 60
Query: 229 IISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPV 285
I+ + R+ F KG G L+ T +A+GLDW+ ++ A + + +
Sbjct: 61 IVDGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVAL 119
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
QGN+DP L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 120 QGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 177
>gi|224015230|ref|XP_002297273.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968067|gb|EED86423.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 314
Score = 235 bits (599), Expect = 9e-60, Method: Composition-based stats.
Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 9/250 (3%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ G + P+WLMRQAGRY+ +RQ K+ F + TP +EL+LQ R
Sbjct: 51 RDILVRCASGQQVERTPVWLMRQAGRYMSAFRQYSDKYP-FRERSETPSMAIELSLQCHR 109
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNID-LFLNYLLP 122
Y D I+FSDIL LG V+ GP + + T+ +++ + + LP
Sbjct: 110 AYGMDGIIMFSDILTPLPTLGIEFDVVKGLGPVISTEVRTEADVAKLKDVESVNFDETLP 169
Query: 123 IFQSI--SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR----A 176
+ I S+ ++ + +LIGF GAP+T+A+Y I G K + + A
Sbjct: 170 FIREILGSLSKEAEEANTSLIGFVGAPFTLAAYTIEGKSSKHCLSTKKMMMADEDGSSKA 229
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ LD L+ + Y QI G VIQ+F++ A L +FE +A + + I ++ K
Sbjct: 230 VSQFLDKLAVMIGNYACHQIECGAQVIQVFESWAHQLSPRQFEAFAKSAAQKAIRIIKEK 289
Query: 237 YPNAKFISFA 246
YP+ F
Sbjct: 290 YPDVPRDLFC 299
>gi|226328703|ref|ZP_03804221.1| hypothetical protein PROPEN_02598 [Proteus penneri ATCC 35198]
gi|225201889|gb|EEG84243.1| hypothetical protein PROPEN_02598 [Proteus penneri ATCC 35198]
Length = 187
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
Y +A + LLD L+D YL AQI AG I IFDT G L +++ ++ + +I
Sbjct: 1 MYAEPQALHLLLDKLADSVILYLNAQIKAGAQSIMIFDTWGGVLTGRDYQLFSLHYMHKI 60
Query: 230 ISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQ 286
+ + R+Y F KG G L+ T +A+GLDW++ + A + + +Q
Sbjct: 61 VDGLIREYDGRKVPVTLFTKGGGRWLEAMAA-TGCDALGLDWTIDIEDARRRVGDKVALQ 119
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP L + V IL G G +FNLGHGI V P++ + V
Sbjct: 120 GNMDPSMLYAPPARIEQEVETILAGFGKGNGHVFNLGHGIHQDVPPEHAGAFIDAVH 176
>gi|331665653|ref|ZP_08366549.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
gi|331057171|gb|EGI29163.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
Length = 184
Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
Y + +A + LLD L+ YL AQI AG + IFDT G L +++ ++ + +I
Sbjct: 1 MYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKI 60
Query: 230 ISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQ 286
+ + R+ F KG G L+ T +A+GLDW+ ++ A + + +Q
Sbjct: 61 VDGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGNKVALQ 119
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP L + + V IL G G +FNLGHGI V P++ V+ V
Sbjct: 120 GNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVH 176
>gi|224128734|ref|XP_002328953.1| predicted protein [Populus trichocarpa]
gi|222839187|gb|EEE77538.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ N +GF GAP T+ASY++ GG K + + A+ + + LL A+Y+
Sbjct: 1 VENKAAGLGFVGAPLTLASYVVEGGSSKHFTKVKRLAFSQPKIPHELLQ---TSMAKYIQ 57
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
Q +G +QIF + A L +FE ++ + +I+ V + +PN I A G+G +L
Sbjct: 58 YQADSGAQTVQIFASWATELSPVDFEEFSLPYLKQIVDTVNQSHPNLPLILHASGSGGLL 117
Query: 254 KNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ LTD + + +DWSV ++ L + VQGN+DP L + + + +N ++
Sbjct: 118 ERLA-LTDVDVVSMDWSVDMAEGRRRLGPDVAVQGNVDPGVLFRSKEFITNRINDVVRKA 176
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G G I NLGHGI +NV ++ +
Sbjct: 177 GKGKHILNLGHGIVVGTPEENVAHFLEVAK 206
>gi|332287794|ref|YP_004422695.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
gi|325506680|gb|ADZ18318.1| uroporphyrinogen decarboxylase [Chlamydophila psittaci 6BC]
Length = 307
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 148/311 (47%), Gaps = 17/311 (5%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
+P+YR+++ + + + E TL DAAILF+DIL + D + F
Sbjct: 1 MPQYRELK-GSQTLKAFFHNTDAITEATLLGPSLLKVDAAILFADILSLLDGFNISYDFA 59
Query: 92 ENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVA 151
P +E + + +YLL ++I L K+L + LI F +P+T+A
Sbjct: 60 PGPQISFSP---EEELVFTKDPQDTFSYLL---EAIKNLVKRL--SVPLIAFAASPFTMA 111
Query: 152 SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG 211
Y++ GG KD + F YQ+ + F+ LL L++ + YL QIHAG IQ+F++ +
Sbjct: 112 CYLLDGGASKDFPRTMAFLYQHPKRFDALLKQLAEGTVIYLKEQIHAGASAIQLFESSSL 171
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDW 269
L F Y ++I+ ++ + ++ F + +N+ L T ++ + D+
Sbjct: 172 RLPSALFSRYVTLPNTQLIAQLKN-HVSSPISLFCRC---FDENFIDLYSTGADTLHPDY 227
Query: 270 SVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITP 327
V LS + G +QGN+DP ++ ++ + L VL P +IFN GHGI P
Sbjct: 228 HVNLSKIYTSVTDPGSLQGNIDPALFLLPQDQFLNHLEKYLSVLKHQPKYIFNSGHGILP 287
Query: 328 QVDPKNVLDLV 338
+ +NV V
Sbjct: 288 ETPLENVQAAV 298
>gi|227540671|ref|ZP_03970720.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33300]
gi|227239475|gb|EEI89490.1| uroporphyrinogen decarboxylase [Sphingobacterium spiritivorum ATCC
33300]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 5/216 (2%)
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+++++L I LIGF GAP+T+ SY++ G +D + + + +++L ++D+
Sbjct: 1 KVIQERLNGSIPLIGFAGAPFTILSYLVEGKSSRDFKLTKTLLNNDPKLAHYILQKITDL 60
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+ +YL QI AGV+ +Q+FD+ A L +++ + +IIS + R+ ISFA+
Sbjct: 61 TVDYLNMQIAAGVNAVQLFDSWAMALTWNDYIEFGHAYTQQIISRINRE--GIPVISFAR 118
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVMIDGVN 306
G+ + I LDW+ + +G VQGN DP+ L V+ ++
Sbjct: 119 GSSVFYPIMSE-AKPDVISLDWNADILNVKNNLPKGIAVQGNFDPIILYADKPVIRKKIH 177
Query: 307 AILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ + + G F+FNLGHGI P + +V V +
Sbjct: 178 ELFERMRGQDGFLFNLGHGIMPDMSFDHVKYAVDVI 213
>gi|227496733|ref|ZP_03927007.1| uroporphyrinogen decarboxylase [Actinomyces urogenitalis DSM 15434]
gi|226833748|gb|EEH66131.1| uroporphyrinogen decarboxylase [Actinomyces urogenitalis DSM 15434]
Length = 279
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 25 MRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
MRQAGR LPEYR +R + L++C PE E TLQP+RR+ DAA+ FSDI+V
Sbjct: 1 MRQAGRSLPEYRAMRAEVGLEMLEVCLRPELAAEATLQPVRRHGVDAAVFFSDIMVPLRL 60
Query: 84 LGRNVRFVENEGPRMD-PITTQEIYLLNPN----IDLFLNYLLPIFQSISILRKKLP--- 135
G VR GP +D P+ T++ + D + + Q + + +L
Sbjct: 61 AGVGVRIEPGVGPVIDRPVRTRQDVEELVSHHYGEDEHAAGVDAVSQGVRAVVAELGTPE 120
Query: 136 ------------------------------NHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+IGF GAP+T+A+Y++ G +DH
Sbjct: 121 QAGPAQPLSPRGRRLSEREVAGLAHSRGKSGWTPVIGFGGAPFTLAAYLVEGRPSRDHLA 180
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
R + + A++ L+ + ++V+ +++ Q+ AG Q+FD+ AG L ++ A
Sbjct: 181 ARTLMHADPEAWHALMTWCAEVTGQFIATQVEAGASAAQLFDSWAGSLAPADYRRAVAPY 240
Query: 226 VGRIISAVRRKY-----PNAKFISFAKGAGYMLKNYRRL 259
+ + + + I F G +L RR
Sbjct: 241 SAQALERAGQAVSSATGSSVPLIHFGTGTARILTEMRRA 279
>gi|331665652|ref|ZP_08366548.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
gi|331057170|gb|EGI29162.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [Escherichia coli
TA143]
Length = 183
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 99/170 (58%), Gaps = 3/170 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
L + ++ +R++L + LIGF G+PWT+A+YM+ GG K +
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKK 169
>gi|332749193|gb|EGJ79615.1| uroporphyrinogen decarboxylase family protein [Shigella flexneri
2747-71]
Length = 169
Score = 222 bits (566), Expect = 6e-56, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 98/170 (57%), Gaps = 3/170 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
L + ++ +R +L + LIGF G+PWT+A+YM+ GG K +
Sbjct: 120 ELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKK 169
>gi|315657606|ref|ZP_07910488.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492078|gb|EFU81687.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 359
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 17/350 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQ---IRKKFKNFLDMCYTPEYTVEL 58
I + +G + P+W + Q+ P+ Q +R++ +D C PE V+
Sbjct: 20 TRTDSPIRQAYRGKRPDSTPVWFLGQSALQHPDNWQDLSVREQ----MDYCLRPEVGVKT 75
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFL 117
L P+R++ DAA+ SD+L +G + VR ++ G M P+ + ++ + L
Sbjct: 76 ALDPVRQFGVDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRSTAD--VDRIMALPN 133
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-KDHGQNRVFAYQNSRA 176
+ R +L LI GAP+ ++S ++ G + Q R+F R
Sbjct: 134 PDWSRVETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRN 193
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L+ + S + +L+AQ+ G +VIQ+ D L E E+ A I +
Sbjct: 194 WERLMSWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLTEGEYACLAESYAREIYNEFDE- 252
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
IS + GA ++L + N +G+ + L+ A ++ +QGNLDP +++
Sbjct: 253 --GIIRISCSLGAEHLLSSISPY--VNVLGVGDELTLAEAAQIVPGMVLQGNLDPDLILL 308
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G +L+ S P +FN+ + P DP V LV + +
Sbjct: 309 GGSDAQAAARQVLESGLSAPAHVFNVAGRLDPDSDPDEVHRLVDFIHDYR 358
>gi|55959134|emb|CAI16439.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 193
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQ-- 71
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
ALG V V +GP +P+ ++ + ++ + L
Sbjct: 72 -------------------ALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 112
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAPWT+ +YM+ GG Q + + YQ +A + LL
Sbjct: 113 VFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLR 172
Query: 183 FLSDVSAEYLIAQIHAGVDVI 203
L+D YL+ Q+ AG +
Sbjct: 173 ILTDALVPYLVGQVVAGAQAL 193
>gi|304390398|ref|ZP_07372351.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326154|gb|EFL93399.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 359
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 84/350 (24%), Positives = 151/350 (43%), Gaps = 17/350 (4%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQ---IRKKFKNFLDMCYTPEYTVEL 58
I + +G + P+W + Q+ P+ Q +R++ +D C PE V+
Sbjct: 20 TRTDSPIRQAYRGKRPDSTPVWFLGQSVLQHPDNWQDLSVREQ----MDYCLRPEVGVKT 75
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFL 117
L P+R++ DAA+ SD+L +G + VR ++ G M P+ + ++ + L
Sbjct: 76 ALDPVRQFGVDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRSTAD--VDRIMTLPK 133
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-KDHGQNRVFAYQNSRA 176
+ R +L LI GAP+ ++S ++ G + Q R+F R
Sbjct: 134 PDWSRVETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRN 193
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ L+ + S + +L+AQ+ G +VIQ+ D L E E+ A I +
Sbjct: 194 WERLMSWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLTEGEYACLAESYAREIYNEFDE- 252
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
IS + GA ++L + N +G+ + L+ A ++ +QGNLDP +++
Sbjct: 253 --GIIRISCSLGAEHLLSSISPY--VNVLGVGDELTLAEAAQIVPGMVLQGNLDPDLILL 308
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G +L+ S P +FN+ + P DP V LV + +
Sbjct: 309 GGSDAQAAARQVLESGLSAPAHVFNVAGRLDPDSDPDEVRRLVDFIHDYR 358
>gi|55959136|emb|CAI16441.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 227
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 62/276 (22%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQP+
Sbjct: 8 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQPL 66
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLP 122
RR+ DAAI+FSDILV+ ALG V V +GP +P+ ++ + ++ + L
Sbjct: 67 RRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGY 126
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+FQ+I++ R++L + LIGF GAP
Sbjct: 127 VFQAITLTRQRLAGRVPLIGFAGAP----------------------------------- 151
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--- 239
+ + HAG Q+F+ +A + + V+ +
Sbjct: 152 -------ALQLFESHAGHLGPQLFN------------KFALPYIRDVAKQVKARLREAGL 192
Query: 240 --AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
I FAK + L+ + +GLDW+V
Sbjct: 193 APVPMIIFAKDGHFALEELAQ-AGYEVVGLDWTVAP 227
>gi|330813369|ref|YP_004357608.1| uroporphyrinogen III decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486464|gb|AEA80869.1| uroporphyrinogen III decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 238
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 5/223 (2%)
Query: 21 PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVI 80
P+WLMRQAGRYLPEY++IRKK KNF++ C ++TLQPI+RY+ DAAI+FSDILVI
Sbjct: 14 PLWLMRQAGRYLPEYQKIRKKQKNFINFCLDVNAATKVTLQPIQRYDLDAAIIFSDILVI 73
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLLNPNID-LFLNYLLPIFQSISILRKKLPNHIT 139
ALG+ V F +NEGP + ++ + F+ L ++ +I RK L +
Sbjct: 74 PYALGQQVDFKKNEGPILG---DFKLSTFKKTQEKEFIKKLKNVYLAIKKTRKLLNKKKS 130
Query: 140 LIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAG 199
LIGF G+PWT+ Y+++ K Q +N++ LL + ++ QI AG
Sbjct: 131 LIGFAGSPWTILVYILNKKSPKK-SQVYKEILKNTKQTKELLKIIEKFIYIHIEQQIKAG 189
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
D IQ+FD+ AG L + ++ + + RI+ +++
Sbjct: 190 ADTIQLFDSWAGLLEKKHYDFFCFQPTKRIVKKIKKNTRTFPL 232
>gi|289612975|emb|CBI59979.1| unnamed protein product [Sordaria macrospora]
Length = 191
Score = 213 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
MI+G ++ + R AY + A L+D + ++ +YL+ Q+ AGV+ +Q+FD+ +G L
Sbjct: 1 MIAGKGSREQAEARRMAYGDPAAVQALIDRIVAMTIDYLVGQVEAGVEAVQLFDSWSGSL 60
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
EFE + I+ +R + + I F KGAG L Y R T +AIGLD +V
Sbjct: 61 APAEFERWVIAPTVAIVKGLRVRV-DVPIIGFPKGAGGKLAAYARETGVDAIGLDETVDP 119
Query: 274 SFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+A EL PVQGNLDP+ L+ G + + GV+ +L P +FNLGHGI
Sbjct: 120 VWANHELPMGLPVQGNLDPLLLIAGGEALDAGVDRVLAAFADRPHVFNLGHGIQQDTPIA 179
Query: 333 NVLDLVKTVRS 343
+V LV VR
Sbjct: 180 HVERLVARVRG 190
>gi|13676390|dbj|BAB41184.1| uroporphyrinogen decarboxylase [Amaranthus tricolor]
Length = 191
Score = 213 bits (543), Expect = 3e-53, Method: Composition-based stats.
Identities = 55/193 (28%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 83 ALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
+ V+ +GP DP+ TQE + + + +++ILRK++ N ++
Sbjct: 1 GMNIPFDIVKGKGPIIFDPLRTQEDVDRVREF-VPEESVPYVGNALTILRKEVDNKAAVL 59
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF GAP+T+ASY++ GG K + + A+ + + + LL + A Y+ Q G
Sbjct: 60 GFVGAPFTLASYVVEGGSSKHFSKIKRLAFSDPKVLHALLQKFATSMANYVKYQADHGAQ 119
Query: 202 VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+QIFD+ A L +FE ++ + +I+ +V+ +PN I +A G+G +L+ LT
Sbjct: 120 AVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKSTHPNLPIILYASGSGGLLERL-PLTG 178
Query: 262 SNAIGLDWSVPLS 274
+ + LDW+V ++
Sbjct: 179 VDVVSLDWTVDMA 191
>gi|255520182|ref|ZP_05387419.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-175]
Length = 198
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 157 GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
GG K++ Q + F Y+ + L++ L ++A YLIAQI+AG +Q+FD+ G L
Sbjct: 1 GGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRA 60
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
++ Y + I+ V+ +P I A GA ++L + + + +G+DW ++ A
Sbjct: 61 DYAEYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAEWETMP-LDVVGVDWRETITSA 119
Query: 277 LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLD 336
+ +QGNLDP L+ + + + + + + +IFNLGHG+ P+V P+ +
Sbjct: 120 RKKVPTKAIQGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKK 179
Query: 337 LVKTVRSEK 345
L +
Sbjct: 180 LTNYIHERS 188
>gi|262277147|ref|ZP_06054940.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [alpha proteobacterium
HIMB114]
gi|262224250|gb|EEY74709.1| uroporphyrinogen decarboxylase (URO-D) (UPD) [alpha proteobacterium
HIMB114]
Length = 337
Score = 208 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 103/355 (29%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
QK L PPIWLMRQAGRY Y+ ++ K+ F ++C PE E T+ PI+
Sbjct: 11 NQKFYNALHRIEQKVPPIWLMRQAGRYHSHYQNLKTKY-TFEELCKIPELICETTMGPIQ 69
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
++FDAAILFSDIL D LG + F N GP +P+T Q + F +Y+
Sbjct: 70 DFDFDAAILFSDILFPLDYLGMGLAF--NPGPEFANPLTEQILNKEKEQS--FSDYIKFQ 125
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++R LPN+ +LIGF GAP+T+ + NS N L
Sbjct: 126 IDGLTLIRDTLPNNKSLIGFVGAPYTL------------FKFAQRHPQSNSNLLNNFLPV 173
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ + E + Q +D++ IFDT A L EF + +I KYP K
Sbjct: 174 IEKILEENIDLQFSVDLDILMIFDTEAQHLNLDEFNKNVKPFIEKI----AHKYPG-KIG 228
Query: 244 SFAKGAG----YMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQ 299
F K LK+ + L +G + + F+ + +QGN L + +
Sbjct: 229 YFTKDIDDEKYESLKSIKDL-KLTVVGFNQDI---FSKLSNTDLSLQGNFPNQYLAIED- 283
Query: 300 VMIDGVNAILDVL----------GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
ID LD +I +L HG+ NV + +R+E
Sbjct: 284 --IDEFKKHLDNFIKYIKDQDLAKRAGWICSLDHGVLKTTPEHNVKLFIDKIRTE 336
>gi|116779035|gb|ABK21110.1| unknown [Picea sitchensis]
Length = 178
Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGR 228
A+ + + LL ++ A Y+ Q G V+QIFD+ A L +FE ++ +
Sbjct: 1 MAFCMPKVLHALLHVFAESMANYICYQADNGAQVVQIFDSWATELSPVDFEEFSLPYLKY 60
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQG 287
I+ +V++ +P I +A G+G +L+ L+ + I LDW+V ++ A + + VQG
Sbjct: 61 IVESVKKTHPKLPLILYASGSGGLLERL-PLSGVDVISLDWTVDMAEARRRIGIDIAVQG 119
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
N+DP L + + + G+ I NLGHG+ NV + +
Sbjct: 120 NVDPGALFGSKDFITKRIYDTVSKAGNSKHILNLGHGVLVGTPEDNVAHFFEVAKG 175
>gi|111608958|gb|ABH11036.1| uroporphyrinogen decarboxylase [Polytomella parva]
Length = 221
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ ++ +G I P WLMRQAGRY YR + K+ +F T + VE++LQP
Sbjct: 34 KDPLLVRAARGEEIERVPCWLMRQAGRYQKVYRDLAAKYPSFRQRSETTDLIVEISLQPW 93
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+ + D I+FSDIL A+G +GP + PI T E +ID L+ L
Sbjct: 94 KSFKPDGVIMFSDILTPLPAMGIEFDIDNTKGPIIQKPIRTMEQVDELYDID--LSRLEF 151
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ +++ +R ++ ++GF G+PWT+A+Y++ G + + + +Y N LL
Sbjct: 152 VSSALTHIRAEVGRKSAVLGFIGSPWTLATYIVEGASSQHYRTIKNLSYSNPDILEALLR 211
Query: 183 FLSDVSAEYL 192
L+ +Y+
Sbjct: 212 KLTIALTDYI 221
>gi|76154669|gb|AAX26107.2| SJCHGC03658 protein [Schistosoma japonicum]
Length = 161
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/163 (42%), Positives = 107/163 (65%), Gaps = 4/163 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R +R+K +F ++C TPE +TLQPI R++ DAAI+FSDILVI AL
Sbjct: 1 MRQAGRYLPEFRALREK-HDFFEICRTPELACTVTLQPIYRFDLDAAIIFSDILVIPQAL 59
Query: 85 GRNVRFVENEGPRM-DPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
G V+ GP+ +P+ + +++ LN N+D+ L +++SI++ R +L + LIG
Sbjct: 60 GMEVKMQPGVGPKFTEPLNSIKDLDRLNANVDVR-KELNYVYESITLTRHRLEGKVPLIG 118
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
F GAPWT+ SYM+ GG + + + + Y + ++ LL+ L+
Sbjct: 119 FSGAPWTLMSYMVEGGSSNTYSRAKRWLYNDPQSSQKLLNLLT 161
>gi|213421411|ref|ZP_03354477.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 186
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 2/180 (1%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLL 121
+RRY DAAILFSDIL I DA+G + F EGPR P+T + P D + L
Sbjct: 1 MRRYPLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-DELG 59
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + LL
Sbjct: 60 YVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLL 119
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+ +
Sbjct: 120 DKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLREKRRSP 179
>gi|255026907|ref|ZP_05298893.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-003]
Length = 189
Score = 203 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
+ F Y+ + L++ L ++A YLIAQI+AG +Q+FD+ G L ++ Y
Sbjct: 1 TKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPV 60
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV 285
+ I+ V+ +P I A GA ++L+ + + + +G+DW ++ A + +
Sbjct: 61 IEMIVREVKAVHPTTPIIMQAVGASHLLEEWETMP-LDVVGVDWRETITSARKKVPTKAI 119
Query: 286 QGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
QGNLDP L+ + + + + + + +IFNLGHG+ P+V P+ + L +
Sbjct: 120 QGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKQLTNYIHERS 179
>gi|326774219|ref|ZP_08233498.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
gi|326635926|gb|EGE36833.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
Length = 250
Score = 202 bits (514), Expect = 6e-50, Method: Composition-based stats.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
++ F GAP+T+A+Y++ G +DH R + +++ L+ + + ++ E++ Q+
Sbjct: 19 TPVLAFGGAPFTLAAYLVEGRPSRDHLAARTLMRADPDSWDRLMTWCARLTGEFIATQVR 78
Query: 198 AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY-----PNAKFISFAKGAGYM 252
AG Q+FD+ AG L + A + R+ A I F G +
Sbjct: 79 AGAAAAQLFDSWAGSLSPRAYRERVAPYSALALDVARQAVSPTTGKAAPLIHFGTGTARL 138
Query: 253 LKNYRRLTDSNAIGLDWSVPLSFALELQ-------KEGPVQGNLDPMRLVVGNQVMIDGV 305
L R+ ++A+G+D + L A+E PVQGNLDP L ++ + +
Sbjct: 139 LGLMRQ-AGADAVGVDERIELGEAIEALAEADPQAGACPVQGNLDPALLAAPWPILAEEL 197
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+A+L + P + NLGHG+ P D + +V V
Sbjct: 198 DAVLAAGRAAPGHVVNLGHGVPPATDADVLTRIVARVHG 236
>gi|118487458|gb|ABK95556.1| unknown [Populus trichocarpa]
Length = 159
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
A+Y+ Q +G +QIFD+ A L +FE ++ + +I+ V++ +PN I +A
Sbjct: 1 MAKYIQYQADSGAQTVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQSHPNLPLILYAS 60
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVN 306
G+G +L+ LT + + LDWSV ++ L + VQGN+DP L + + + +
Sbjct: 61 GSGGLLERLA-LTGVDVVSLDWSVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIY 119
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
++ G G I NLGHGI +NV + +
Sbjct: 120 DVVKKAGKGKHILNLGHGIVVGTPEENVAHFFEVAKG 156
>gi|215412486|ref|ZP_03421220.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis
94_M4241A]
Length = 176
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 72/180 (40%), Positives = 109/180 (60%), Gaps = 5/180 (2%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGR LPEYR +R+++ + L C+ P+ E+TLQPIRRY+ DAAILFSDI+V A
Sbjct: 1 MRQAGRSLPEYRALRERY-SMLAACFEPDVACEITLQPIRRYDVDAAILFSDIVVPLRAA 59
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G ++ V + GP + DP+ T +D + P+ + S+L +L + LIGF
Sbjct: 60 GVDLDIVADVGPVIADPVRTAADVAAMKPLD--PQAIQPVLVAASLLVAEL-GDVPLIGF 116
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAP+T+ASY++ GG + H + +++ L+ L+D++ +L+ QI AGVD I
Sbjct: 117 AGAPFTLASYLVEGGPSRHHAHVKAMMLAEPASWHALMAKLTDLTIAFLVGQIDAGVDAI 176
>gi|23005188|ref|ZP_00048138.1| COG0407: Uroporphyrinogen-III decarboxylase [Magnetospirillum
magnetotacticum MS-1]
Length = 204
Score = 188 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 7/188 (3%)
Query: 5 KQKILEVLQ----GNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+ +++ L+ G P+W MRQAGR LPEYR R+ + LD C P+ E+TL
Sbjct: 19 RSPLVQALRAGTTGKRPEITPVWFMRQAGRSLPEYRAAREGV-SMLDSCLRPDLASEITL 77
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI-TTQEIYLLNPNIDLFLNY 119
QP+RR+ DA I FSDI+V G V GP M T + +L +
Sbjct: 78 QPVRRHRVDAGIFFSDIVVPLRLAGVEVEIAPGVGPVMGQAYRTPDDVARLVESELTEDA 137
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L PI +++++ L LIGF GAP+T+A+Y++ G +DH R + +
Sbjct: 138 LAPIREAVALTVDAL-GTTPLIGFAGAPFTLAAYLVEGRPSRDHLAARALLRGDPETWQR 196
Query: 180 LLDFLSDV 187
L+D+ +D+
Sbjct: 197 LVDWAADL 204
>gi|298345898|ref|YP_003718585.1| putative uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC
43063]
gi|298235959|gb|ADI67091.1| possible uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC
43063]
Length = 313
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQ 104
+D C PE V+ L P+R++ DAA+ SD+L +G + VR ++ G M P+ +
Sbjct: 17 MDYCLRPEVGVKTALDPVRQFGVDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRST 76
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-KDH 163
++ + L + R +L LI GAP+ ++S ++ G +
Sbjct: 77 AD--VDRIMTLPKPDWSRVETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQN 134
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
Q R+F R + L+ + S + +L+AQ+ G +VIQ+ D L E E+ A
Sbjct: 135 LQTRIFMQSQPRNWERLMSWCSSLVRHFLMAQVRGGAEVIQMVDPWVRTLTEGEYACLAE 194
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
I + IS + GA ++L + N +G+ + L+ A ++
Sbjct: 195 SYAREIYNEFDE---GIIRISCSLGAEHLLSSISPY--VNVLGVGDELTLAEAAQIVPGM 249
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVR 342
+QGNLDP +++G +L+ S P +FN+ + P DP V LV +
Sbjct: 250 VLQGNLDPDLILLGGSDAQAAARQVLESGLSAPAHVFNVAGRLDPDSDPDEVRRLVDFIH 309
Query: 343 SEK 345
+
Sbjct: 310 DYR 312
>gi|108755399|emb|CAI77923.1| uroporphyrinogen decarboxylase precursor [Guillardia theta]
Length = 261
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQP 62
R ++ V +G P+WL RQAGR+LPEY +K+ NFL + P++ E T+QP
Sbjct: 78 RNDLMVRVARGEKAEKTPVWLFRQAGRHLPEYEAYKKETGCNFLQLLDDPKHVAECTMQP 137
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQ-EIYLLNPNIDLFLNYL 120
IRRYN DAAILFSDILV+A+ALG V +G + P+ + E+ P + L
Sbjct: 138 IRRYNLDAAILFSDILVVAEALGIKVEMPGGKGITVPHPLASPSEVSTRIPASIDVKDKL 197
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ +++K+L + LIGF APWT+ YM+ G K+ + + ++
Sbjct: 198 SHVIDAVKLIKKELDGKVPLIGFSAAPWTLMYYMVGGSSKKNQENRKRWLKEHPVESQKW 257
Query: 181 LDFL 184
LD L
Sbjct: 258 LDIL 261
>gi|323943586|gb|EGB39695.1| uroporphyrinogen decarboxylase [Escherichia coli H120]
Length = 143
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
LQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D +
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPE-D 119
Query: 119 YLLPIFQSISILRKKLPNHITLIG 142
L + ++ +R++L + LIG
Sbjct: 120 ELGYVMNAVRTIRRELKGEVPLIG 143
>gi|213583356|ref|ZP_03365182.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 152
Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFE 219
K + Y + +A + LLD L+ YL AQI AG + IFDT G L +++
Sbjct: 1 SKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQ 60
Query: 220 NYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA- 276
++ + +I+ + R+ F KG G L+ T +A+GLDW+ ++ A
Sbjct: 61 QFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADAR 119
Query: 277 LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
+ + +QGN+DP L + D V IL
Sbjct: 120 RRVGHKVALQGNMDPSMLYAPPARIEDEVATIL 152
>gi|194374481|dbj|BAG57136.1| unnamed protein product [Homo sapiens]
Length = 170
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 23/179 (12%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
MRQAGRYLPE+R+ R ++F C +PE ELTLQ AL
Sbjct: 1 MRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQ---------------------AL 38
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V +GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF
Sbjct: 39 GMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGF 98
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG V
Sbjct: 99 AGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQV 157
>gi|213622166|ref|ZP_03374949.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 145
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 209 HAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIG 266
G L +++ ++ + +I+ + R+ F KG G L+ T +A+G
Sbjct: 1 WGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAE-TGCDALG 59
Query: 267 LDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHG 324
LDW+ ++ A + + +QGN+DP L + D V IL G G +FNLGHG
Sbjct: 60 LDWTTDIADARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILAGFGQGEGHVFNLGHG 119
Query: 325 ITPQVDPKNVLDLVKTVR 342
I V P++ V+ V
Sbjct: 120 IHQDVPPEHAGAFVEAVH 137
>gi|255024904|ref|ZP_05296890.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-208]
Length = 166
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G V GP + +PI T + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVEVEIKSGIGPVIHNPIRTFQDVEKLTMFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++ Q +
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTK 166
>gi|55792589|gb|AAV65387.1| plastid uroporphyrinogen decarboxylase [Prototheca wickerhamii]
Length = 192
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ +G + P W+MRQAGRY YR + K +F + VE++LQP
Sbjct: 18 EPLMVRASRGETVERSPCWMMRQAGRYQKAYRDLALKHPSFRERSEDVGLIVEISLQPWE 77
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPI 123
+ D I+FSDI+ A+G + GPR+ DPI ++E +D L+ L +
Sbjct: 78 SFKPDGVIIFSDIMTPLPAMGIPFEIDDARGPRIADPIRSREQVGQLHALD--LDQLSFV 135
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
++ LR + ++GF G+PWT+A+Y++ GG + + Y +
Sbjct: 136 GDALRALRATVAGQAAVLGFVGSPWTLATYIVEGGSSLTYKTIKSLCYTARGCW 189
>gi|108708052|gb|ABF95847.1| Uroporphyrinogen decarboxylase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 299
Score = 178 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 62/302 (20%), Positives = 116/302 (38%), Gaps = 59/302 (19%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ ++G L +AGR Y+ + ++ +F + + VE++LQP +
Sbjct: 49 EPLLVSAIEGEE-GRETAGLAYEAGR--ESYQLLCERHPSFCERSELVDLVVEISLQPWK 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPI 123
+ D AILFSDIL + V+ +G DP+ T + ++ +
Sbjct: 106 VFTPDGAILFSDILTPLPRMNIPFDIVKGKGSVIFDPLRTAAAVNEVREF-VPEEWVPYV 164
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
Q+++ILR+++ N T++ F GAP+T+ASY + GG K+ + + A
Sbjct: 165 GQALNILREEINNEATVLSFVGAPFTLASYCVEGGSSKNFSKIKKMALSEPEI------- 217
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
+ +V+ +P I
Sbjct: 218 ----------------------------------------------VDSVKETHPELPLI 231
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMID 303
+A G+G +L+ LT + + L L VQGN+DP L + + +
Sbjct: 232 LYASGSGGLLERL-PLTGVDVVSLGTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISN 290
Query: 304 GV 305
+
Sbjct: 291 RI 292
>gi|255024534|ref|ZP_05296520.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J1-208]
Length = 166
Score = 178 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Query: 190 EYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA 249
YLIAQI+AG +Q+FD+ G L ++ Y + I+ V+ +P I A GA
Sbjct: 1 NYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKAAHPTTPIIMQAVGA 60
Query: 250 GYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAIL 309
++L + + + +G+DW ++ A + +QGNLDP L+ + + + +
Sbjct: 61 SHLLAEWETMP-LDVVGVDWRETITSARKKVPTKAIQGNLDPSTLLAPAKCLEEADRILQ 119
Query: 310 DVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +IFNLGHG+ P+V P+ + L +
Sbjct: 120 EGVLEPGYIFNLGHGVFPEVPPEMLKKLTNYIHERS 155
>gi|255025826|ref|ZP_05297812.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL J2-003]
Length = 164
Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKATRKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLN 118
P+ +Y DAAIL+ DI+ +G +V GP + +PI + + +
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEIE 119
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+ + +I +L + + + LIGF GAP+T+ASYMI GG K++
Sbjct: 120 -VPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNY 162
>gi|289808186|ref|ZP_06538815.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 138
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++ +R++L + LIGF G+PWT+A+YM+ GG K + Y + +A + LLD
Sbjct: 1 MNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDK 60
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AK 241
L+ YL AQI AG + IFDT G L +++ ++ + +I+ + R+
Sbjct: 61 LAKSVTLYLNAQIKAGAQSVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP 120
Query: 242 FISFAKGAGYMLKNYRR 258
F KG G L+
Sbjct: 121 VTLFTKGGGQWLEAMAE 137
>gi|21227541|ref|NP_633463.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|22095919|sp|P58984|MTBA_METMA RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|20905921|gb|AAM31135.1| Methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 339
Score = 172 bits (437), Expect = 5e-41, Method: Composition-based stats.
Identities = 71/363 (19%), Positives = 136/363 (37%), Gaps = 43/363 (11%)
Query: 1 MNE--RKQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMC 49
M E K+++ L+ ++ P + M +G + PE
Sbjct: 1 MTEYTPKERLYRALRKQPVDRMPAVCFTQTGTVEQMEASGAFWPEAHA------------ 48
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPITTQEIYL 108
E +L F+A + DI A+ G ++ + + P + + + +
Sbjct: 49 -DAEKMAKLAEAGHTVIGFEAVRVPFDITAEAELFGCGIKAGDLKQQPSVIKHSVKNLED 107
Query: 109 LNP--NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
L+ N L + I +++ IL +K + +IG P+++A ++ + +
Sbjct: 108 LDKIKNYSLDTGRIGTILKAVKILSEKYGKELPVIGSMIGPFSLAQHINGDAWFGNL--- 164
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAAR 224
+ LLDF +D + Y A + G D I I D A +G +E YA
Sbjct: 165 ----FTGEDIVPALLDFCADFNIAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALP 220
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
+I+ A++ + A + L T NAI +D V + A +
Sbjct: 221 YQKKIVDAMK-ELDVATVLHICGNTTNGL-AIMDRTGVNAISVDQRVDIKTATGNVENAI 278
Query: 285 VQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GNLDP+ ++ + + +LD G I +G GI N+ +V+ +
Sbjct: 279 IVGNLDPVAVLWNGTPEDVEAASKKVLDA---GVGILTVGCGIVSMTPSANLQKMVECAK 335
Query: 343 SEK 345
+ +
Sbjct: 336 NYR 338
>gi|20089044|ref|NP_615119.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|21542152|sp|P58869|MTBA_METAC RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|19913902|gb|AAM03599.1| methylcobalamin:CoM methyltransferase isozyme A [Methanosarcina
acetivorans C2A]
Length = 339
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/363 (19%), Positives = 134/363 (36%), Gaps = 43/363 (11%)
Query: 1 MNE--RKQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMC 49
M E K+++ L+ ++ P + M +G Y PE +K +
Sbjct: 1 MTEYTPKERLYRALRKQPVDRMPAVCFTQTATVEQMEASGAYWPEAHADAEKMATLAEAG 60
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDP--ITTQEI 106
+T F+A + DI A+ G ++ + + P + + E
Sbjct: 61 HTV-------------IGFEAVRVPFDITAEAELFGCGIKAGDLKQQPSVIKHVVKNMED 107
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
L + I ++I IL +K + +IG P+++A ++ + +
Sbjct: 108 MEKLKGYSLNEGRVGLILEAIKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGNL--- 164
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAAR 224
+ LLDF SD + Y A + G D I I D A +G +E YA
Sbjct: 165 ----FTGEEIVPALLDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALP 220
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
+I+ A++ + + T N I +D V + A + +
Sbjct: 221 YQKKIVDAMKELDVGTVLHICGNTTNGL--SIMDKTGVNGISVDQRVDIKTATDNVENAI 278
Query: 285 VQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GNLDP+ ++ + + + +LDV G + + G GI N+ +V+ +
Sbjct: 279 IIGNLDPVAILWNGTPEDVAEASKKVLDV---GVGLLSPGCGIVSMTPSANLQKMVECAK 335
Query: 343 SEK 345
+ K
Sbjct: 336 NYK 338
>gi|308125695|ref|ZP_07663483.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
gi|308115554|gb|EFO53094.1| uroporphyrinogen decarboxylase [Vibrio parahaemolyticus K5030]
Length = 146
Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 209 HAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIG 266
L ++ ++ + + +I+ + R+ F K G L+ T +A+G
Sbjct: 1 MGWRLTPRDYNLFSLQYMHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAA-TGCDAVG 59
Query: 267 LDWSVPLSFA-LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGH 323
LDW++ ++ A + + +QGN+DP L + + + V IL+ G +FNLGH
Sbjct: 60 LDWTINIADAKARIGDKVALQGNMDPSMLYASPERIREEVAGILEGFGDAGTGHVFNLGH 119
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
GI V P+N V+ V
Sbjct: 120 GIHLDVPPENAGVFVEAVHELS 141
>gi|73668382|ref|YP_304397.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|1107728|emb|CAA62996.1| methylcobalamin: Coenzyme M methyltransferase (isoenzyme II)
[Methanosarcina barkeri]
gi|72395544|gb|AAZ69817.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
gi|1587219|prf||2206339B methylcobalamin/coenzyme M methyltransferase
Length = 339
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/348 (20%), Positives = 129/348 (37%), Gaps = 32/348 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHTV----------- 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGP-RMDP-ITTQEIYLLNPNIDLFLNYL 120
F+A + DI A+ G ++ + + P + P + E N +L +
Sbjct: 64 --VGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K I +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKEIPIIGSMIGPFSLAQHINGDAWFGNL-------FTGEEIVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I+ A++ +
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAMK-ELD 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV--V 296
A + L T N I +D V + A K + GNLDP+ ++
Sbjct: 234 VATVLHICGNTTNGLGIM-DKTGVNGISVDQKVDIKTATGNVKNALIVGNLDPVAVLWNG 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + +LD G + +G G N+ +++ +S
Sbjct: 293 TPEEIAEVSKKVLDA---GVGLLTVGCGTVSMTPTVNLQKMIECAKSH 337
>gi|219558687|ref|ZP_03537763.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
gi|289570854|ref|ZP_06451081.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
gi|289544608|gb|EFD48256.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 157
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 200 VDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+D IQ+FD+ AG L ++ Y R+ +A+ F G +L
Sbjct: 1 MDAIQVFDSWAGALSPIDYRQYVLPHSARVFAALGEH--GVPMTHFGVGTAELLGAMSEA 58
Query: 260 TDSN-------AIGLDWSVPL-SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDV 311
+ +G+DW PL A + +QGNLDP ++ G + A++D
Sbjct: 59 VTAGERPGRGAVVGVDWRTPLTDAAARVVPGTALQGNLDPAVVLAGWPAVERAARAVVDD 118
Query: 312 ------LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ IFNLGHG+ P+ DP + DLV V S
Sbjct: 119 GRRAVDAGAAGHIFNLGHGVLPESDPAVLADLVSLVHS 156
>gi|298674882|ref|YP_003726632.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287870|gb|ADI73836.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/348 (20%), Positives = 131/348 (37%), Gaps = 25/348 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M ++++ L+G ++ P + Q + E I + D PE L++
Sbjct: 1 MKNMNERLINALKGEEVDKKPAVSVTQTA--IVELMDITG--AEWPDAHSDPEKMATLSM 56
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDLFL 117
+ N +A + V+A+ALG V +N P + P L P+
Sbjct: 57 ASHEQGNLEAIRNPFCLTVLAEALGCGVNMGTKNRQPSITDHPYPKDISDLKMPDDLYNT 116
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ +F+S I++ K + + LI P T+AS ++ K ++ + F
Sbjct: 117 GRIPAVFESSKIIKDKYGDEVPLISGLEGPATLASDLV---SPKSF---MKWSIKKPDNF 170
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
+ ++DF +D EY ++ G DV+ + D A L ++F+N + R V+
Sbjct: 171 DAIMDFATDACIEYANGMVNNGADVVCVADPVASPDLLSPNDFDNRIKPRLQRFAEEVKA 230
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALE-LQKEGPVQGNL-DPM 292
+ G + + T + + L+ V L A E + + GN+ P
Sbjct: 231 -----PTVLHICGNVTPIIDMMADTGFDGLSLEEKVKDLKGAKETVGDRASIVGNVSSPF 285
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
++ G + + G + G GI P NV LV
Sbjct: 286 TILGGTPDKVKEDAK--KAMDDGVDVLAPGCGIAPNSPLANVQALVDA 331
>gi|1061406|gb|AAC44214.1| methylcobamide:CoM methyltransferase isozyme A [Methanosarcina
barkeri]
Length = 339
Score = 163 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/348 (19%), Positives = 128/348 (36%), Gaps = 32/348 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHTV----------- 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGP-RMDP-ITTQEIYLLNPNIDLFLNYL 120
F+A + DI A+ G ++ + + P + P + E N +L +
Sbjct: 64 --VGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K + +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGNL-------FTGEEVVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I A++ +
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIADAMK-ELD 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV--V 296
A + L+ T N I +D V + A K + GNLDP+ ++
Sbjct: 234 VATVLHICGNTTNGLEIM-DKTGVNGISVDQKVDIKTATGSVKNAIIVGNLDPVAVLWNG 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + LD G + +G G N+ +++ +S
Sbjct: 293 TPEEIAEASKKALDA---GVGLLTVGCGTVSMTPTVNLQKMIECAKSH 337
>gi|21542151|sp|O30640|MTBA_METBA RecName: Full=Methylcobamide:CoM methyltransferase mtbA; AltName:
Full=MT2-A; AltName: Full=Methylcobamide:CoM
methyltransferase II isozyme A
gi|2342551|gb|AAC38632.1| methylcobamide:CoM methyltransferase isozyme A [Methanosarcina
barkeri]
Length = 339
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 69/348 (19%), Positives = 128/348 (36%), Gaps = 32/348 (9%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
RKQ++ + + M G Y PE +K + +T
Sbjct: 15 RKQQVDRMPAVCFTQTATVEQMEACGAYWPEAHSDAEKMATLAEAAHTV----------- 63
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVE-NEGP-RMDP-ITTQEIYLLNPNIDLFLNYL 120
F+A + DI A+ G ++ + + P + P + E N +L +
Sbjct: 64 --VGFEAVRVPFDITAEAEFFGCGIKAGDLKQQPSVIKPSVKNLEDLEKLKNYNLKEGRI 121
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +++ IL +K + +IG P+++A ++ + + + L
Sbjct: 122 AVVLEAVKILSEKYGKELPIIGSMIGPFSLAQHINGDAWFGNL-------FTGEEVVPAL 174
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRRKYP 238
LDF SD + Y A + G D I I D A +G +E YA +I+ A++ +
Sbjct: 175 LDFCSDFNVAYAKAMVENGADTIAIIDPTASYELIGGEFYEKYALPYQKKIVDAMK-ELD 233
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV--V 296
A + L T N I +D V + A K + GNLDP+ ++
Sbjct: 234 VATVLHICGNTTNGLGIM-DKTGVNGISVDQKVDIKTATGSVKNAIIVGNLDPVAVLWNG 292
Query: 297 GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + LD G + +G G N+ +++ +S
Sbjct: 293 TPEEIAEASKKALDA---GVGLLTVGCGTVSMTPTVNLQKMIECAKSH 337
>gi|340183|gb|AAB59456.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 161
Score = 163 bits (412), Expect = 4e-38, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 4/154 (2%)
Query: 85 GRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGF 143
G V V ++GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF
Sbjct: 1 GMEVTMVPSKGPSFPEPLREEQDLEALRDPEVVASELGYVFQAITLTRQRLAGRVPLIGF 60
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG
Sbjct: 61 AGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGA--- 117
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
Q+F++HAG LG F +A + + V+ +
Sbjct: 118 QLFESHAGHLGPQLFNKFALPYIRDVAKQVKARL 151
>gi|298674283|ref|YP_003726033.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298287271|gb|ADI73237.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 340
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 67/359 (18%), Positives = 124/359 (34%), Gaps = 45/359 (12%)
Query: 5 KQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K++ + L+G ++ P + M +G Y P D Y +
Sbjct: 8 KERFAKALKGESVDRMPAICATQTGTVEQMEASGAYWP-------------DAHYDADKM 54
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-P--RMDPITTQEIYLLNPN 112
L F+ + DI A+ G ++ + P + T++
Sbjct: 55 TTLAEAAHTAVGFEMVRVPFDITAEAEFFGCELKEGTQKQQPSVVGHVVKTEDDIKSLEG 114
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
DL + I +SI L K + + + G P+++A ++ + +
Sbjct: 115 YDLSQKRIGTICESIKQLADKYGDELPIFGSMIGPFSLAQHLNGDDWFTN-------VMI 167
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRII 230
N LLDF ++ Y Q+ G D + I D A LG F + +++
Sbjct: 168 NEEFGKKLLDFTTEFCVAYAKKQVENGADTVVIIDPTASYELLGPDFFRKFVLPYHKQVV 227
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLD 290
A + + L + ++AI +D V ++ A E + + GNLD
Sbjct: 228 DACKDMGVGT-IVHICGDTTKGLPIM-DESGTDAISVDQKVDVATAKENVQNAKIVGNLD 285
Query: 291 PMRLV--VGNQVMIDGVNAILDVLGS--GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
P+ + V+ + LD P G GI +N+ +V+ +S K
Sbjct: 286 PVETLWNGNPDVIKEKSQESLDKGVDFLAP-----GCGIVSATSNENLQTMVECAKSWK 339
>gi|218192784|gb|EEC75211.1| hypothetical protein OsI_11474 [Oryza sativa Indica Group]
Length = 209
Score = 159 bits (402), Expect = 6e-37, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 46/211 (21%)
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
+ N ++GF GAP+T+ASY + GG K+ + + A+
Sbjct: 41 VNNEAAVLGFVGAPFTLASYCVEGGSSKNFSKIKKMAFSEPEVM---------------- 84
Query: 194 AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
Q D+ R+ R +P I +A G+G +L
Sbjct: 85 ----------QPADSP------------------RLWIVSRETHPELPLILYASGSGGLL 116
Query: 254 KNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ LT + + LDW+V ++ L VQGN+DP L + + + +
Sbjct: 117 ERL-PLTGVDVVSLDWTVDMAEGRKRLGSNIAVQGNVDPGVLFGSKEFISKRIFDTVQKA 175
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G+ + NLGHGI +NV + +
Sbjct: 176 GNSGHVLNLGHGIKVGTPEENVAHFFEVAKG 206
>gi|294869182|ref|XP_002765773.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
gi|239865968|gb|EEQ98490.1| uroporphyrinogen decarboxylase, putative [Perkinsus marinus ATCC
50983]
Length = 168
Score = 158 bits (401), Expect = 8e-37, Method: Composition-based stats.
Identities = 51/144 (35%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
++ ++L +G ++ P+W+MRQAGRYLPE++++R + +F+ +C P+ E+T+QP
Sbjct: 26 KQNRLLRAARGEEVDEIPVWIMRQAGRYLPEFKELRAE-HDFVKVCQDPDLASEVTIQPY 84
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMDPI--TTQEIYLLNPNIDLFLNYL 120
RR+N DA I+FSDIL I +G+++ V +GP + P T ++I + L
Sbjct: 85 RRFNKLDACIVFSDILTIPMLMGQHLEMVPGKGPVLSPKLETPEDIERILNLKPNVGEGL 144
Query: 121 LPIFQSISILRKKLPNHITLIGFC 144
++ +I KL N +T+IGFC
Sbjct: 145 AYVYDAIFATVSKLENQLTVIGFC 168
>gi|219851930|ref|YP_002466362.1| Uroporphyrinogen decarboxylase (URO-D) [Methanosphaerula palustris
E1-9c]
gi|219546189|gb|ACL16639.1| Uroporphyrinogen decarboxylase (URO-D) [Methanosphaerula palustris
E1-9c]
Length = 337
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/359 (22%), Positives = 140/359 (38%), Gaps = 40/359 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQ--------AGRYLPEYRQIRKKFKNFLDMCYTP 52
MN ++I+ L + P+ + Q AG L EY IR
Sbjct: 1 MNS-IERIVSTLNFEKPDRVPV--IAQVFGHAATVAGMNLGEY--IRDG----------- 44
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI----TTQEIYL 108
E ++ + RY +DA D V +A G + + +N+ P + T L
Sbjct: 45 ELLARGQIRALDRYGYDAVFALMDTSVETEAAGSVLTYFKNKYPIVKSYALSQDTDPDNL 104
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P+ + + + ILR+++ + + ++G P T+A+ ++ Q
Sbjct: 105 SVPDPHQA-GRMPALLNAAGILREEIGDEVLVVGCVLGPLTLATQLLG------IEQALY 157
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSV 226
A + F +LDF +DV + AQI AGV + +FD A + F + +
Sbjct: 158 LAIDDPEQFGRVLDFATDVVIRFGTAQIEAGVHLPVVFDPSASPAVIPPMFFYEFEVPRL 217
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ 286
R+ S+++ A ++ A G +L Y + D+SV A E +
Sbjct: 218 TRLFSSLKEHGAVANWLHIAGSVGSILPFYPE-AGVDIANFDYSVNPLDAQEALPRTVLD 276
Query: 287 GNLDPMRLV-VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
GN+ P V + + + ++D G FI + G I + +NV+ LV R+
Sbjct: 277 GNIRPWSFVEAPPEEITRESSRLMDRFAHRGGFILSSGCEIPLESRQENVMALVMAART 335
>gi|38047565|gb|AAR09685.1| similar to Drosophila melanogaster Updo [Drosophila yakuba]
Length = 144
Score = 156 bits (394), Expect = 6e-36, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 207 DTHAGCLGEHEFENYAARSVGRIISAV-----RRKYPNAKFISFAKGAGYMLKNYRRLTD 261
++ A L + +F + + RI + ++ P FAKGAG+ LK L
Sbjct: 1 ESSAEHLSKEQFLQWGVPYLKRIRDELVDRLTKKAIPVVPMTLFAKGAGHSLKEQSEL-G 59
Query: 262 SNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFN 320
+ IGLDW+V A + +QGNLDP + + + ++ G +I N
Sbjct: 60 YDVIGLDWTVDPLEARTLVGPNITLQGNLDPQDMYRDPDELRNLTTEMVHKFGKSRYIAN 119
Query: 321 LGHGITPQVDPKNVLDLVKTVR 342
LGHGITPQ ++ LV+ V
Sbjct: 120 LGHGITPQTPITSMEVLVEAVH 141
>gi|330938624|gb|EGH42191.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 103
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 62/97 (63%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ + L L ++ P+W+MRQAGRYLPEYR R +F+ +C P++ E+T+QP+
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDFMSLCKNPQFACEVTMQPL 64
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP 100
RY DAAILFSDIL I DA+G+ + F EGPR
Sbjct: 65 DRYPLDAAILFSDILTIPDAMGQGLYFETGEGPRFRK 101
>gi|218507364|ref|ZP_03505242.1| uroporphyrinogen decarboxylase [Rhizobium etli Brasil 5]
Length = 117
Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/115 (61%), Positives = 92/115 (80%)
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+I+++R + P+A+ I+FAKGAGY LK YR+ T ++AIGLDWSVPL+FA ELQK+GPVQGN
Sbjct: 1 MIASIRSQRPHARIIAFAKGAGYQLKAYRQKTGADAIGLDWSVPLAFAAELQKDGPVQGN 60
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LDPMR+V G + + +G++ IL LG GP IFNLGHGITPQ DP +V LV+ VR
Sbjct: 61 LDPMRVVAGGRALEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVERVRG 115
>gi|206900521|ref|YP_002250449.1| methylcobamide:CoM methyltransferase MtbA, putative [Dictyoglomus
thermophilum H-6-12]
gi|206739624|gb|ACI18682.1| methylcobamide:CoM methyltransferase MtbA, putative [Dictyoglomus
thermophilum H-6-12]
Length = 319
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/289 (21%), Positives = 124/289 (42%), Gaps = 18/289 (6%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYL 120
+ R+N D F D+ V A+ALG + F EN+ P + P+ ++ ++
Sbjct: 43 VERFNPDGIFPFMDLTVEAEALGLKIEFPENDNPSVREHPVKNRDALNEIKRKWKGVSER 102
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ F + + K N I G+ P+T+A ++ + D G N ++ +
Sbjct: 103 MITFIKVCEMMAKEFN-ILKGGYVIGPFTLAGELV---GVNDLGIN---VIEDPDFVEEV 155
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+DF + V EY A + G+D+I + + A L +F ++ + + S +++
Sbjct: 156 VDFTTSVIFEYAKALLETGIDMIAVLEPTAVILSPQQFREFSMKHFKHLSSELKK----- 210
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLV--VG 297
I G L + + + LD +V L +A E+ + + GNLDP+++
Sbjct: 211 PVIYHICGNTKHLIEDMGKSGAWGLSLDSAVDLKWASEIVPSDVRLIGNLDPVKVFLQGN 270
Query: 298 NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+++ + +L+ + FI + G I +N+ ++ +S K
Sbjct: 271 PEMIYEKTKELLEKMRDVDNFILSSGCDIPLGTPLENIDAFMQAAKSFK 319
>gi|217967122|ref|YP_002352628.1| uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
gi|217336221|gb|ACK42014.1| Uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
Length = 319
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 122/288 (42%), Gaps = 18/288 (6%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYL 120
+ R+N D F D+ V A+ALG + F ENE P + PI +E ++
Sbjct: 44 LERFNPDGIFPFMDLTVEAEALGLKIDFPENENPSVREHPIKDREALAELKRKWNGISGR 103
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +F + + K + I G+ P+T+A ++ + D G N + +
Sbjct: 104 MKVFIKVCEMMVKEFDRI-KGGYVIGPFTLAGELM---GVNDLGIN---VLEEPEFVKEV 156
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++F + V EY G+DV+ + + A L F+ ++ + + S ++R
Sbjct: 157 VEFTTKVILEYAKVLFETGIDVVAVLEPTAVILSPQLFKEFSMKYFKYLSSEIKRPL--- 213
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VG 297
+++++ + + + + LD +V L +A E+ + GNLDP+ +
Sbjct: 214 -IYHICGNTKHLIEDMGK-SGAWGLSLDSAVDLKWASEIVPSKVNLIGNLDPVGVFLQGS 271
Query: 298 NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+++ + +L+ + FI + G I +N+ ++ ++
Sbjct: 272 PEMVYERTWKLLERMKDVENFILSSGCDIPVGTPLENIDAFMQAAKNF 319
>gi|227536216|ref|ZP_03966265.1| possible uroporphyrinogen decarboxylase [Sphingobacterium
spiritivorum ATCC 33300]
gi|227244113|gb|EEI94128.1| possible uroporphyrinogen decarboxylase [Sphingobacterium
spiritivorum ATCC 33300]
Length = 126
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN+ + + G+ PP+W+MRQAGRY+PEY +I+ K+ FL+MC TPE ++
Sbjct: 1 MNKTLQNDLFIRAAFGHQTERPPVWMMRQAGRYMPEYWEIKNKY-TFLEMCKTPEIAADV 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFL 117
T+ P+ + DAAILFSDILV +A+G ++ F + GPR +P+ + E +
Sbjct: 60 TMLPVDLLDIDAAILFSDILVTPEAMGGDLSFEQGVGPRFSNPVRSWEDAE--KLNAQSV 117
Query: 118 NYLLPIFQS 126
+ L + +
Sbjct: 118 DRLQYVADA 126
>gi|269964308|ref|ZP_06178562.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269830956|gb|EEZ85161.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 129
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 226 VGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKE 282
+ +I+ + R+ F K G L+ T +A+GLDW++ ++ A + +
Sbjct: 1 MHKIVDGLIRENDGRRVPVTLFTKNGGMWLEQIAA-TGCDAVGLDWTINIADAKARIGDK 59
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKT 340
+QGN+DP L + + + V IL+ G +FNLGHGI V P+N V+
Sbjct: 60 VALQGNMDPSMLYASPERIREEVAGILEGFGDAGTGHVFNLGHGIHLDVPPENAGVFVEA 119
Query: 341 VRSEK 345
V
Sbjct: 120 VHELS 124
>gi|91772822|ref|YP_565514.1| methylcobalamin:coenzyme M methyltransferase [Methanococcoides
burtonii DSM 6242]
gi|91711837|gb|ABE51764.1| methanol-specific methylcobalamin:CoM methyltransferase
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 70/358 (19%), Positives = 126/358 (35%), Gaps = 44/358 (12%)
Query: 1 MNERKQ--KILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMC 49
M + ++L L ++ P+ LM Q G PE
Sbjct: 1 MTDLNPKERLLNALNREPVDKVPVVSVTQTAIVDLMDQTGAEWPEAH------------- 47
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM-DPITTQEIY 107
E L + +A + V+A+A+G V +N P + D
Sbjct: 48 SDAEKMATLAVASHEIAGLEAVRYPYCLTVLAEAMGCEVNMGTKNRQPSVTDHPYKDVDN 107
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
L+ P+ L + + ++ I+ K+ + I L+ P T+AS ++ +K
Sbjct: 108 LVMPDDLLSNGRIPAVLEATKIIIDKVGDKIPLVAGMEGPVTLASDLV---SVKKF---M 161
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARS 225
++ + +LDF +D Y A AG DVI + D A L F+
Sbjct: 162 KWSIKKPDDLETILDFATDACIVYANALADAGADVICVPDPVASPDLLNPETFDKMLKPR 221
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALE-LQKEG 283
+ R V+ + G + + + ++ V L A++ +
Sbjct: 222 LARFAEGVKC-----PMVLHICGNVTPILDMMADCKFEGLSIEEKVADLKGAIKTVGDRA 276
Query: 284 PVQGNL-DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+ P L+ G+ + + D L G + + G GI P +NV LV+
Sbjct: 277 VIVGNVSSPFTLLSGDVEKVKAESK--DALEGGVAVLSPGCGIAPNTPVENVKALVEA 332
>gi|219666265|ref|YP_002456700.1| uroporphyrinogen decarboxylase [Desulfitobacterium hafniense DCB-2]
gi|219536525|gb|ACL18264.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfitobacterium
hafniense DCB-2]
Length = 335
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 61/299 (20%), Positives = 129/299 (43%), Gaps = 13/299 (4%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLL 109
E + L +++++DA ++ D + A+ALG V F EN P ++ ++ L
Sbjct: 42 QNGEILAQCQLDSQQKFDYDAVFVYGDNCIEAEALGSRVYFPENAYPYIEKYRLEDPRQL 101
Query: 110 NPNIDLFLN---YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
D + + + +++++L+ +L + + + G P ++AS ++ +
Sbjct: 102 KDLPDFNPSTDGRMPELLRAVALLKTELGDSLPIAGVVLGPMSIASQLMGL------ERL 155
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAAR 224
+ F ++ F S ++ + +A + G + + D A L F Y
Sbjct: 156 LYLLLDSPCEFADIIRFASGITLKAGLALLAQGAHISAVIDPSASQSILPSEMFGRYLLP 215
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
++ I S + A ++ + +L YR+ + G+D+ VPL+ AL+ + +
Sbjct: 216 TIRDIFSQFKGAGAMASWLVITGNSQGLLPYYRQ-CGVDIAGIDYEVPLAEALKWEGDFL 274
Query: 285 VQGNLDPMRLVV-GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN+ P R V Q +I ++ + FI + G + P+N+ L+K VR
Sbjct: 275 ISGNIKPYRFVNQTPQEIIREGKELISLAAGRRFILSSGCEVPLDTKPENLAALIKAVR 333
>gi|21227172|ref|NP_633094.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20905508|gb|AAM30766.1| Methylcobalamin: Coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 342
Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 66/351 (18%), Positives = 126/351 (35%), Gaps = 29/351 (8%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E K ++L L+G ++ P+ + Q G + E + + + PE +L
Sbjct: 4 MSEFTLKTRLLAALKGEPVDKVPVCSVTQTG--IVELMDVVG--APWPEAHTNPELMAKL 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDL 115
L +A L + V+ +A+G + +N P + P P L
Sbjct: 60 ALANHELSGLEAVRLPYCLTVLVEAMGCEINMGTKNRQPSVTGHPYPKDLEGAAVPADLL 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++I I+R+K+ + ++G P TVAS ++S ++ + +
Sbjct: 120 QRGRIPVVLEAIKIIREKVGPDVPIVGGMEGPVTVASDLVSVKSF------MKWSIKKTD 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
LD ++ S Y A + AG DVI I D A + F + + + S+V
Sbjct: 174 LLEQALDIATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSV 233
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP-VQGNL-D 290
+ +L + + ++ + E+ + GN+
Sbjct: 234 NS----VTVLHICGNVNPILSDMAD-CGFEGLSVEEKIGSAKKGKEVIGTRARLVGNVSS 288
Query: 291 PMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P L+ + L+ + G GI P +NV LV
Sbjct: 289 PFTLLPGPVDKIKAEAKEALEGGID---VLAPGCGIAPMTPLENVKALVAA 336
>gi|20093166|ref|NP_619241.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19918509|gb|AAM07721.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 342
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 66/351 (18%), Positives = 128/351 (36%), Gaps = 29/351 (8%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E K ++L ++G ++ P+ + Q G + E + + + PE +L
Sbjct: 4 MSEFTLKTRLLAAVKGEPVDKVPVCSVTQTG--IVELMD--EVGAPWPEAHTNPELMAKL 59
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDL 115
L +A + + V+ +A+G + +N P + P P L
Sbjct: 60 ALANYELSGLEAVRVPYCLTVLVEAMGCEINMGTKNRQPSVTGHPFPKALDGAAVPADLL 119
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++I I+R+K+ + +IG P TVAS ++S ++ +
Sbjct: 120 QKGRIPAVLEAIKIIREKVGPDVPIIGGMEGPITVASDLVSVKSF------MKWSIKKPD 173
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
F LD + S Y A + AG D+I I D A + F+ Y + + S+V
Sbjct: 174 LFEQSLDLATAASIAYANAMVEAGADIIAIADPVASPDLMSPDSFKQYLQPRLQKFSSSV 233
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP-VQGNL-D 290
+ +L + ++ + + A E+ + GN+
Sbjct: 234 SSVT----VLHVCGNVNPILSYMAD-CGFEGLSVEEKIGSVKKAKEVIGTRARLIGNISS 288
Query: 291 PMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P L+ + L G + G GI P +N+ +V+
Sbjct: 289 PFTLLPGPVDKIKAESK---QALADGVDVLAPGCGIAPMTPLENIKAMVEA 336
>gi|289808187|ref|ZP_06538816.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 91
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRF 90
LQP+RRY DAAILFSDIL I DA+G + F
Sbjct: 61 LQPLRRYPLDAAILFSDILTIPDAMGLGLYF 91
>gi|1061404|gb|AAC44213.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
barkeri]
Length = 339
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 69/353 (19%), Positives = 129/353 (36%), Gaps = 33/353 (9%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E K ++L L+G ++ P+ + Q G + E + + + PE +L
Sbjct: 1 MSEFTLKTRLLAALEGKPVDKVPVCSVTQTG--IVELMD--EVGAAWPEAHTNPELMAKL 56
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDL 115
+ +A L + V+ +A+G + +N P + P P L
Sbjct: 57 AIANYELSGLEAVRLPYCLTVLGEAMGCEINMGTKNRQPSVTASPYPKNLDGAAVPADLL 116
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
N + + ++I I+R+K+ + +IG P T+AS +IS ++ + +
Sbjct: 117 QRNRIPAVLEAIKIVREKVGPDVPIIGGMEGPVTLASDLISVKSF------MKWSIKKTD 170
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
F LD ++ + Y A + AG DVI I D A + F + + + ++V
Sbjct: 171 LFEQALDISTEAAIAYANAMVEAGADVIAIADPVASPDLMSPDTFRQFLQSRLQKFSASV 230
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGNL 289
+ +L + D GL + A E + + GN+
Sbjct: 231 NS----VTVLHICGKVNAILSDMA---DCGFEGLSVEEKIGDAAEGKKVIGDRARLVGNI 283
Query: 290 -DPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P L+ + L+ + G GI P +N+ LV
Sbjct: 284 SSPFTLLPGPIDKIKAEAKVALEGGID---VLAPGCGIAPMTPLENIKALVAA 333
>gi|294494963|ref|YP_003541456.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
gi|292665962|gb|ADE35811.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
Length = 342
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 62/364 (17%), Positives = 132/364 (36%), Gaps = 54/364 (14%)
Query: 5 KQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
K+++ V +G ++ P + M G Y PE + P
Sbjct: 7 KERLARVFEGKEVDRMPAICATQTGTVEQMDAVGAYWPEAHE-------------DPVKM 53
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
L F+A + DI A+ G ++ E P + +++
Sbjct: 54 AALAEAGHTVVGFEAVRVPFDITAEAEFFGCGIKPSTKEQ---QPSVISHVVSKAEDLEQ 110
Query: 116 FLNY------LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
F Y + + +++ IL K + + +IG P+++A ++ + + ++ F
Sbjct: 111 FEGYNIEDGRIGNVCEAVKILSDKYGDELPIIGSMIGPFSLAQHLNGDSWFMNIMTDQEF 170
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVG 227
L++F ++ +Y + Q+ G D I D A +G ++ +
Sbjct: 171 GL-------KLMEFTTEFCTQYALKQVENGADTFAIIDPTASYQLIGADFYKTFVVPFHQ 223
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
+I+ A+ K I G +AI +D +V + A+E + + G
Sbjct: 224 KIVEALHEK--GIPSILHICGDTTNGLAIMETCGVDAISVDQNVDPAAAVENVDKALILG 281
Query: 288 NLDPMRLV-----VGNQVMIDGVNAILDVLGS--GPFIFNLGHGITPQVDPKNVLDLVKT 340
NLDP+ ++ + + + +LD P G GI + +N+ +++
Sbjct: 282 NLDPVSVLWNQGEDNVEGVKEESKNVLDAGVQLLAP-----GCGIVSKTPTQNLQAMIEA 336
Query: 341 VRSE 344
++
Sbjct: 337 AKNW 340
>gi|89892996|ref|YP_516483.1| hypothetical protein DSY0250 [Desulfitobacterium hafniense Y51]
gi|89332444|dbj|BAE82039.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 289
Score = 142 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 128/293 (43%), Gaps = 13/293 (4%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
+ L +++++DA ++ D + A+ALG V F EN P ++ ++ L D
Sbjct: 2 AQCQLDSQQKFDYDAVFVYGDNCIEAEALGSRVYFPENAYPYIEKYRLEDPRQLKDLPDF 61
Query: 116 FLN---YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ + + +++++L+ +L + + + G P ++AS ++ +
Sbjct: 62 NPSTDGRMPELLRAVALLKTELGDSLPIAGVVLGPMSIASQLMGL------ERLLYLLLD 115
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRII 230
+ F ++ F S ++ + +A + G + + D A L F Y ++ I
Sbjct: 116 SPCEFADIIRFASGITLKAGLALLAQGAHISAVIDPSASQSILPSEMFGRYLLPTIRDIF 175
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLD 290
S + A ++ + +L YR+ + G+D+ VPL+ AL+ + + + GN+
Sbjct: 176 SQFKGAGAMASWLVITGNSQGLLPYYRQ-CGVDIAGIDYEVPLAEALKWEGDFLISGNIK 234
Query: 291 PMRLVV-GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
P R V Q +I ++ + FI + G + P+N+ L+K VR
Sbjct: 235 PYRFVNQTPQEIIREGKELISLAAGRRFILSSGCEVPLDTKPENLAALIKAVR 287
>gi|91774014|ref|YP_566706.1| methylcobalamin:coenzyme M methyltransferase [Methanococcoides
burtonii DSM 6242]
gi|91713029|gb|ABE52956.1| methylamine-specific methylcobamide:CoM methyltransferase
[Methanococcoides burtonii DSM 6242]
Length = 344
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/352 (17%), Positives = 124/352 (35%), Gaps = 32/352 (9%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +K+ + V + M G + PE Y + L
Sbjct: 15 NQTEKVDRMPAICVTQTGTVEQMEACGIFWPE-------------ANYDAKMLAGLAAAG 61
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDPITTQEIYLLNP----NIDLFL 117
F+A + DI A+ G ++ P + + L P +I+
Sbjct: 62 HTEIGFEAIRVPFDITAEAEFFGCGIKDGTKVQQPSVINHVVNSLDDLKPFEGYDINDSS 121
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ I +SI I+ + + +IG P+++A ++ + D +
Sbjct: 122 KRISTILESIKIVADEYGAELPIIGSMIGPFSLAQHLTGDSWFMDIMTKEEYGL------ 175
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRR 235
+++F ++ Y AQI G D + I D A +G ++ + +++ A+
Sbjct: 176 -AIMEFTTEFGIAYANAQIDNGADTLSIIDPTASYSLIGGEFYKKFVVPFHAKLVEAMHA 234
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV 295
+ N + G +AI +D +V + A+ ++ + GNLDP+ +
Sbjct: 235 R--NVPVVLHVCGDTTDGLAIMESAGVDAISVDQNVNAATAVSKVEKALIVGNLDPVNCL 292
Query: 296 --VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +L L + G GI Q ++ +V+ +S K
Sbjct: 293 WNTSVETVTAESERVLKELDGKGLLA-PGCGIVSQTPSAHLRAMVEVAKSYK 343
>gi|325264042|ref|ZP_08130774.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Clostridium sp.
D5]
gi|324030526|gb|EGB91809.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Clostridium sp.
D5]
Length = 338
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 67/346 (19%), Positives = 131/346 (37%), Gaps = 28/346 (8%)
Query: 1 MNERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN ++ L G+ ++ P +M A R +I + F+ E
Sbjct: 1 MNSYERVFAR-LNGDPVDRIPNLCLVMTFAAR------EIGVPYGQFIT---DYRLLSEG 50
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT----TQEIYLLNPNID 114
L+ +Y+ DA + SD + A G V F EN+ P P+ Q+I L
Sbjct: 51 MLRCYEKYHLDALSVCSDPMREAGGFGAEVVFPENDVPY-SPVPLITGCQDIGRLKITEP 109
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ +++ +L+ + N + +IG+ + ++ D
Sbjct: 110 ASSRRMNDRLEAVRLLKSRTGNEVPVIGWVEGAVAESCDLM------DVSNCLCEMLDEP 163
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
A + LL + + + AQ+ AG D+I I D +G +E +A ++IS +
Sbjct: 164 EAMHELLTICLEQAELFARAQLEAGADIIGIGDAACSLIGPDLYEEFALPYQQKLISRIH 223
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMR 293
K + + T ++ + LD+ V L A ++ E + GN DP++
Sbjct: 224 DAGGKVKLHICGNLNPVL--HLVAKTGADIVDLDYMVDLRKACDIFPETSCLNGNFDPVQ 281
Query: 294 LVVGNQ--VMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+++ + V L G + + G + P+N+ ++
Sbjct: 282 ILLQGDIKTIDRAVKECLACAGLHRTMISAGCEVPTFTPPENLEEV 327
>gi|83590291|ref|YP_430300.1| cobalamin B12-binding [Moorella thermoacetica ATCC 39073]
gi|83573205|gb|ABC19757.1| Cobalamin B12-binding protein [Moorella thermoacetica ATCC 39073]
Length = 556
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 72/338 (21%), Positives = 135/338 (39%), Gaps = 32/338 (9%)
Query: 25 MR------QAGRYLP----EYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILF 74
MR Q+GR+L + K ++ ++ E R+ D
Sbjct: 1 MRLIDLVNQSGRHLVFFIGSFPGAAMKGVTLKEVYFSASLQAETACYLAERFQIDFIRPV 60
Query: 75 SDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLPI-FQSISILR 131
+D++V A+A+G R+ +N P + PIT E + + LPI ++I +++
Sbjct: 61 TDLVVEAEAMGLKARYPDNGAPVLVEHPITGPEALANLNLPEPGRDGRLPINLEAIRLIK 120
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
++ +IG P+T+A + D + + + LL F + Y
Sbjct: 121 QR--TDKPVIGSLTGPFTLAGALC------DPAGVAMKTITDPEFLHALLAFCTRALKRY 172
Query: 192 LIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
A + AG D++ I + L +F ++ R + I +A +P + Y
Sbjct: 173 GEALLAAGADILWISEPLGSLLSPAQFWQFSGRYIQEIFAA----FPAMDILHICGDTSY 228
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDP--MRLVVGNQVMIDGVNAI 308
M+K T + + LD V L A ++ ++ + GN+DP + L Q ++ +
Sbjct: 229 MIKEMLA-TGAQGLSLDSRVSLPVLATQMPEDVVLIGNIDPVGVMLEGSPQQVVKATANL 287
Query: 309 LDVLGS-GPFIFNLGHGITP-QVDPKNVLDLVKTVRSE 344
L + FI + G P +V N+ V+T R+
Sbjct: 288 LTAMLPFNNFIVSTGC-TLPFEVPAANISAFVETARNF 324
>gi|73671068|ref|YP_307083.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|72398230|gb|AAZ72503.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
Length = 339
Score = 139 bits (351), Expect = 5e-31, Method: Composition-based stats.
Identities = 66/352 (18%), Positives = 134/352 (38%), Gaps = 31/352 (8%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKN-FLDMCYTPEYTVE 57
MNE K+++L L+G ++ P+ + Q G ++ K + + PE
Sbjct: 1 MNEMALKERLLNALEGKEVDKVPVCSVTQTGIV-----ELMDKVGAPWPEAHSDPEKMAT 55
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNID 114
L + +A + + V+A+A+G V +N P + P + P
Sbjct: 56 LAIANYELSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKSLEGMEMPENL 115
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + + + SI I+R+++ + +IG P T+AS + +K ++ +
Sbjct: 116 LDMGRIRTVLDSIKIIRERVGPDVPIIGGMEGPVTLASDL---ASVKSF---MKWSVKKP 169
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISA 232
+ +LDF +D + Y + + AG DVI + D A + F+N + + S
Sbjct: 170 DLLHQVLDFATDATIAYANSMVVAGADVISVADPVASPDLMSPDSFKNELQSRLQKFSSN 229
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP-VQGNL- 289
V + +L +Y + ++ V + A E+ + + GN+
Sbjct: 230 VNS----VTVLHICGSVSPIL-DYMADCGFEGLSVEEKVGSIKKAKEVLGDRARLVGNIS 284
Query: 290 DPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P L+ + + + + G GI P ++ +V+
Sbjct: 285 SPFVLLPGPIDKIKEESKKAISEGVD---VLAPGCGIAPMTPLSHIKAMVEA 333
>gi|297516834|ref|ZP_06935220.1| uroporphyrinogen decarboxylase [Escherichia coli OP50]
Length = 86
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRYNFDAAILFSDILVIADALG 85
LQP+RRY DAAILFSDIL + DA+G
Sbjct: 61 LQPLRRYPLDAAILFSDILTVPDAMG 86
>gi|4140696|gb|AAD04168.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 109
Score = 136 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVM 301
I FAK + L+ + +GLDW+V A E + K +QGNLDP L + +
Sbjct: 1 IIFAKDGHFALEELAQ-AGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEI 59
Query: 302 IDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +LD G +I NLGHG+ P +DP++V V V
Sbjct: 60 GQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 103
>gi|294495642|ref|YP_003542135.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
gi|292666641|gb|ADE36490.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanohalophilus mahii DSM 5219]
Length = 339
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 72/359 (20%), Positives = 132/359 (36%), Gaps = 47/359 (13%)
Query: 1 MNE--RKQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMC 49
M+E +K ++ L+G ++ P+ LM G PE K
Sbjct: 1 MSELTQKTRLTNALKGESVDKAPVASVTQTATVELMEMTGASWPEAHSDASKM------- 53
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEI 106
+L L +A + V+A+A+G V +N P + P T
Sbjct: 54 ------AKLALASHTEAGLEAVRYPFCLTVLAEAMGCEVNMGTQNRQPSITEHPYTKGTD 107
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
L P+ L + + ++ I+R + + +I P T+AS + +K
Sbjct: 108 DLKMPDNLAKLGRIPAVVETTGIVRDSVGEDVPIIAGMEGPVTLASDL---ASVKKF--- 161
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAAR 224
++ + FN +LDF +D EY + +GVD+I + D A + F +
Sbjct: 162 MKWSIKKPDDFNTILDFATDACIEYANILLDSGVDMICVADPVASPDLMNPATFNDTLKP 221
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALE-LQKE 282
+ + AV K + G + + + ++ V + A + ++
Sbjct: 222 CLAKFAEAV----DCVKILHVC-GNVTPILDMMGDCKFEGLSIEEKVKDVKEAKKTVEGR 276
Query: 283 GPVQGNL-DPMRLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+ GN+ P ++ G + + V LD S + G GI P +NV LV+
Sbjct: 277 ATLVGNVSSPFTILSGTPDKVKEEVKKALDDGIS---VVAPGCGIAPNSPLENVKALVE 332
>gi|213621143|ref|ZP_03373926.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 123
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 83 ALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI 141
A+G + F EGPR P+T + P D + L + ++ +R++L + LI
Sbjct: 1 AMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPE-DELGYVMNAVRTIRRELKGEVPLI 59
Query: 142 GFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVD 201
GF G+PWT+A+YM+ GG K + Y + +A + LLD L+ YL AQI AG
Sbjct: 60 GFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHLLLDKLAKSVTLYLNAQIKAGAQ 119
Query: 202 VIQI 205
+ I
Sbjct: 120 SVMI 123
>gi|326772616|ref|ZP_08231900.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
gi|326637248|gb|EGE38150.1| uroporphyrinogen decarboxylase [Actinomyces viscosus C505]
Length = 209
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIR 64
+LE L G P+W MRQAGR LPEYR +R + L+ C P E+TLQP+R
Sbjct: 100 PALLEALAGRRPARTPVWFMRQAGRSLPEYRALRARAGVPMLEACLDPALAAEVTLQPVR 159
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT 103
R+ DAA+ FSDI+V G VR E GP +D P+ +
Sbjct: 160 RHGVDAAVFFSDIMVPLRLAGVGVRIEEGVGPVLDAPVRS 199
>gi|302389278|ref|YP_003825099.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
gi|302199906|gb|ADL07476.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
Length = 340
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/363 (21%), Positives = 135/363 (37%), Gaps = 45/363 (12%)
Query: 2 NERKQKILEVLQGNVINPPPI------------WLMRQAGRYLPEYRQIRKKFKNFLDMC 49
N K +++ VL+G ++ P+ +M GR P R
Sbjct: 3 NSEKTRLINVLEGKPVDRVPVICPGGMMNMAVREVMTATGRTWP-----RAHI------- 50
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD--PITTQEI 106
P+ L+L + + + V A+ALG V E+ PR+ P+ E
Sbjct: 51 -DPKDMAMLSLGVKHLGGIENVGVPFCMTVEAEALGAGVFIGTESTEPRVAEYPLKRVEE 109
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
+ P+I + + ++I IL++K P +IG P ++A+ +I D +
Sbjct: 110 WENLPSITEDHYRVSIVLEAIRILKEKCP-ETPVIGNITGPISLATSLIE---PMDFYRA 165
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAAR 224
+ LDF++D + A + AG D+I I D LG F A
Sbjct: 166 ---LRRKPDTALRFLDFVTDNLIFFAKAMLKAGADIINIADPSGTGEILGPWAFSKVAVP 222
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
+ +I AV + G +L +L S I +D L E +
Sbjct: 223 YINKITDAVEAS-SGYAMVHICGRLGSVLAELGKL-KSPVISIDALTGLRKVKESLPDKV 280
Query: 285 VQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN+ L +V I V +I G I GI+P+ +N+ +V+ +
Sbjct: 281 IMGNVSTFLLEKGTPEKVAIAAVTSIKQGAG----ILAPACGISPRTPLENIRAMVRAAK 336
Query: 343 SEK 345
E+
Sbjct: 337 GER 339
>gi|91773002|ref|YP_565694.1| methylcobalamin:coenzyme M methyltransferase [Methanococcoides
burtonii DSM 6242]
gi|91712017|gb|ABE51944.1| methanol-specific methylcobalamin:CoM methyltransferase
[Methanococcoides burtonii DSM 6242]
Length = 345
Score = 134 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 66/349 (18%), Positives = 130/349 (37%), Gaps = 34/349 (9%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K++ + L+G ++ P+ + Q G E + K + + Y E +L +
Sbjct: 7 KKRFIRSLKGKTVDKVPVCSVTQTGTT--ELMKSSKAY--WPQAHYDAEKMADLAIAGNE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENE---GPRMD--PITTQEIYL--LNPNIDLFL 117
+A + VIA AL +E P + P +E P+ L
Sbjct: 63 VAGLEAVRYPFCVTVIAQAL--GCTIMEGTSDAQPHQEGVPCARKEDVKDISVPSDLLER 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + ++ I++K++ + I +I P +A ++ K++ ++ +
Sbjct: 121 ERIATVLKATDIVKKRVDDDIPIIAGMIGPAGIAFHL---AGEKNYF---IWLIKKPDLI 174
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
L+ ++V EY A GVD + I D G + FE++ +I +
Sbjct: 175 KDLIGIGTEVCIEYSNALFEHGVDAVTISDPEGGPALISPQMFESFVLPEYKKI----NK 230
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
K K + + +L+ + + + I ++ V + A E + + GN+ P
Sbjct: 231 KVNGLKILHMCGDSTSILEPLLK-SGFDGISIEEKVEVKRAKEIIGDRACLIGNVSPSST 289
Query: 295 V---VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ V + + I D +G I G GI P KN+ V
Sbjct: 290 LLSKTPEDVKREAMQCIRDGVG----ILAPGCGIAPHTPLKNMKAFVAA 334
>gi|222055590|ref|YP_002537952.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
gi|221564879|gb|ACM20851.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
Length = 362
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/354 (17%), Positives = 132/354 (37%), Gaps = 27/354 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M R++ I L G + P+ L L R + + + +
Sbjct: 10 MTSRERTI-AALTGQPYDRIPVNL-------LISDHAARVIGVTVGEYNNSASLMAQGQV 61
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFL 117
RRY D + IA+A+G + + ++ D + +E L P+ +
Sbjct: 62 AAWRRYGADNVNTGPGLTGIAEAIGSKLAYPDSTPYVADYVVKEEADFDRLKVPDPERD- 120
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L ++ +I+ K++ + + L P+T A+ + ++ ++ ++N +
Sbjct: 121 GRLPLFLEAATIVLKEVGDQVPLNMTTSGPFTTATSI---RGTENFLRD---LHKNPQFA 174
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
+ LL +D + +A I G I + D A + +F +A + + +AV
Sbjct: 175 HRLLRLSTDSIIRFAVAAIKVGAR-IGLADPTASGTMISPRQFREFAQPYLQEVATAVAA 233
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPM-R 293
A + + T ++ + LD +V ++ A ++ + + GN+ P
Sbjct: 234 VAGAAPSLHICGNTSKIWPGMTA-TGASVLSLDDAVDIAEAKLQVGNKVAILGNIRPTAA 292
Query: 294 LVVGNQ-VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +G + + L P +I LG G+ P+N+ LV R
Sbjct: 293 MYLGKPGDVRENARECLTKGWDNPKGYILGLGCGLPIDTPPENIHALVGAAREY 346
>gi|21226278|ref|NP_632200.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20904521|gb|AAM29872.1| Methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 339
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/358 (18%), Positives = 129/358 (36%), Gaps = 46/358 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M + +++L L+G ++ P+ LM Q G PE
Sbjct: 4 MTLK-ERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAH-------------SE 49
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYL 108
PE +L + +A + + V+A+A+G V +N P + P +
Sbjct: 50 PELMAKLAIANYEVSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGM 109
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P + + + SI I+R+K+ + +IG P T+AS + +K
Sbjct: 110 EMPENLIDKGRIQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDL---SSVKTF---MK 163
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSV 226
++ + F +LDF ++ + Y + AG DV+ I D A + F+N +
Sbjct: 164 WSLKKPDLFEQVLDFATEATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRL 223
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP- 284
R S V + +L +Y + ++ + + A E+ +
Sbjct: 224 QRFSSNVNS----VTVLHVCGNVNPIL-DYMADCGFEGLSVEEKIGSVKKAKEILGDRTR 278
Query: 285 VQGNL-DPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+ P L+ + LD + G GI P ++ +V+
Sbjct: 279 LVGNISSPFTLLPGPVDKIKTEARQALDDGVD---VLAPGCGIAPMTPVSHIKAMVEA 333
>gi|262382385|ref|ZP_06075522.1| uroporphyrinogen decarboxylase family protein [Bacteroides sp.
2_1_33B]
gi|262295263|gb|EEY83194.1| uroporphyrinogen decarboxylase family protein [Bacteroides sp.
2_1_33B]
Length = 355
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 52/312 (16%), Positives = 111/312 (35%), Gaps = 24/312 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-------GPRMD 99
D+ + + +Y +D ++ D IA+A+G V F E+E P +
Sbjct: 42 DVNRNGRKMAQAHIISQEKYGYDGCVIDFDDATIAEAVGAKVIFREDEPATVDEGCPVLK 101
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCG-APWTVASYMISGG 158
+ + P+ L L ++ L + + + ++G P+++A +
Sbjct: 102 DLRDVYDMPI-PDP-LRSGRLCEWLEATRTLVDAIGDRVFVMGRADQGPFSIACLLRG-- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEH 216
++ R N +L++ +SA + AQ AG I D AG +
Sbjct: 158 ---TTQFMMDLLTEDKRLINDVLEYCRKISAVFAKAQKDAGAHATSIGDAFAGPNLISPD 214
Query: 217 EFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF 275
+ +A ++ V+ F I ++++ T + + +DW + +
Sbjct: 215 MYREFALEPERKLAKDVQDY--GIPFSIHICGNTNGIIQDMG-TTGARILEVDWMLDIKE 271
Query: 276 ALELQK-EGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
A L + GN+DP ++ + V +++ I + G + P+
Sbjct: 272 ARRLVPENIVLMGNVDPSFPLVIGTPIDVDAAVRDLIEATQGRSHIVSSGCAMGRNTPPE 331
Query: 333 NVLDLVKTVRSE 344
N + R
Sbjct: 332 NFKAFIAAARKY 343
>gi|20090473|ref|NP_616548.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19915492|gb|AAM05028.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 339
Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats.
Identities = 65/351 (18%), Positives = 134/351 (38%), Gaps = 29/351 (8%)
Query: 1 MNER--KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M++ K+++L L+G ++ P+ + Q G + E + + + +L
Sbjct: 1 MSDMTLKERLLNALEGKQVDKVPVCSVTQTG--VVELMD--EVGAPWPEAHSDAGLMAKL 56
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDL 115
+ +A + + V+A+A+G V +N P + P L P+ L
Sbjct: 57 AIATHELGGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGLKMPDNLL 116
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++I I+R+K+ + +IG P T+AS + +K ++ +
Sbjct: 117 GTGRIPVVLEAIKIIREKVGPDVPVIGGMEGPVTLASDL---SSVKSF---MKWSIKKPD 170
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
F +LDF ++ + Y A + AG D+I + D A + F+ + + S+V
Sbjct: 171 LFERILDFAAEGTVVYANAMVEAGADIISVADPVASPDLMSPDTFKTELEPRLQKFSSSV 230
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP-VQGNL-D 290
+ +L NY + ++ + + A E+ + GN+
Sbjct: 231 NS----VTVLHVCGNVNPIL-NYMADCGFEGLSVEEKIGSIKKAKEVLGTRARLVGNISS 285
Query: 291 PMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P L+ + L G + G GI P N+ +V++
Sbjct: 286 PFTLLPGPVDKIKAESK---QALADGVDVLAPGCGIAPMTSVANIKAMVES 333
>gi|20089663|ref|NP_615738.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19914589|gb|AAM04218.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 341
Score = 132 bits (333), Expect = 8e-29, Method: Composition-based stats.
Identities = 63/356 (17%), Positives = 125/356 (35%), Gaps = 38/356 (10%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+E ++ + L+G + P+ + Q G E ++ + + Y +L
Sbjct: 1 MSEFTLNKRFEKALKGGPTDLIPVCSVTQTGTV--ELMEMTGAY--WPQANYDALKMADL 56
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDL-- 115
L + F+ V+A+ LG V EG + P T ++
Sbjct: 57 ALAGYKLAGFENVRCPFCTTVLAETLGCTVA----EGSIDIQPYVTDFPCKKKKDVKDIT 112
Query: 116 ------FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ ++ IL++++ + ++ P +AS + +K++ +
Sbjct: 113 IPGSLLESRRTSVVLDAVGILKERVGEDVPVVAGLVGPAGLASML---AGMKNYLM---W 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
N L+ L++ EY + G D + + D+ AG + FE
Sbjct: 167 FVTNPELVEELMGVLTEACIEYAKGLLERGADAVTLIDSEAGPDIIAPQMFETSVLPLYR 226
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
+ R+ P K + A ++L I ++ V +SFA + +
Sbjct: 227 KFC----REVPGLKILHMCGDATFVLDPLAD-AGFEGISIEEKVGVSFAKGIVGSRVCLI 281
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GN+ P L G + +I A L+ I G G+ P +N+ L +
Sbjct: 282 GNVSPSDTLLAKGPEEVIIEARACLEDGID---ILAPGCGLAPHTPLENIKALFRA 334
>gi|315654485|ref|ZP_07907391.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
gi|315490949|gb|EFU80568.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
Length = 229
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQ---IRKKFKNFLDMCYTPEYTVEL 58
I + +G + P+W + Q+ P+ Q +R++ +D C PE V+
Sbjct: 20 TRTDSPIRQAYRGKRPDSTPVWFLGQSVLQHPDNWQDLSVREQ----MDYCLRPEVGVKT 75
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGPRMDPITTQEIYLLNPNIDLFL 117
L +R++ DAA+ SD+L +G + VR ++ G M P+ + ++ + L
Sbjct: 76 ALDSVRQFGVDAALCNSDVLFPLRLVGYDLVRKIDPHGEPMRPLRSTAD--VDRIMALPN 133
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI-KDHGQNRVFAYQNSRA 176
+ R +L LI GAP+ ++S ++ G + Q R+F R
Sbjct: 134 PDWSRVETLSRAQRSELAPEKVLIAIAGAPFVLSSLLVEGSVSVPQNLQTRIFMQSQPRN 193
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQI 205
+ L+ + S + +L+AQ+ G +VIQ+
Sbjct: 194 WERLMSWCSSLVRHFLMAQVRGGAEVIQM 222
>gi|73668587|ref|YP_304602.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|1107726|emb|CAA62995.1| methylcobalamin: Coenzyme M methyltransferase (isoenzyme I)
[Methanosarcina barkeri]
gi|72395749|gb|AAZ70022.1| methanol-specific methylcobalamin: coenzyme M methyltransferase
[Methanosarcina barkeri str. Fusaro]
gi|1587218|prf||2206339A methylcobalamin/coenzyme M methyltransferase
Length = 339
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 70/354 (19%), Positives = 130/354 (36%), Gaps = 35/354 (9%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKN-FLDMCYTPEYTVE 57
M+E K ++L L+G ++ P+ + Q G ++ K + + PE +
Sbjct: 1 MSEFTLKTRLLAALEGKPVDKVPVCSVTQTGIV-----ELMDKVGAAWPEAHTNPELMAK 55
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNID 114
L + +A L + V+ +A+G + +N P + P + P
Sbjct: 56 LAIANYELSGLEAVRLPYCLTVLGEAMGCEINMGTKNRQPSVTASPYPKNLDGAVVPADL 115
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L N + + ++I I+R+K+ + +IG P T+AS +IS ++ + +
Sbjct: 116 LQRNRIPAVLEAIKIVREKVGPDVPIIGGMEGPVTLASDLISVKSF------MKWSIKKT 169
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISA 232
F LD ++ + Y A + AG DVI I D A + F+ + + + +
Sbjct: 170 DLFEQALDISAEAAIAYANAMVEAGADVIAIADPVASPDLMSPETFKQFLQSRLQKFSAG 229
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE----LQKEGPVQGN 288
V + +L + D GL + A E + + GN
Sbjct: 230 VNS----VTVLHICGKVNAILSDMA---DCGFEGLSVEEKIGTAAEGKKIIGDRARLVGN 282
Query: 289 L-DPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ P L+ + L+ + G GI P +NV LV
Sbjct: 283 ISSPFTLLPGPIDKIKAEAKVALEGGID---VLAPGCGIAPMTPLENVKALVAA 333
>gi|307267091|ref|ZP_07548603.1| Uroporphyrinogen decarboxylase (URO-D) [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917880|gb|EFN48142.1| Uroporphyrinogen decarboxylase (URO-D) [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 308
Score = 131 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/286 (20%), Positives = 103/286 (36%), Gaps = 17/286 (5%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLL 121
++N DA + D+ V A+ALG + ENE + PIT E + + +
Sbjct: 32 EKFNPDAVLYMMDLSVEAEALGLKINKPENESYTVSEHPITNIEELRKLKIPNPLKDGRM 91
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
P+F ++ K + I + P+T+ M + L
Sbjct: 92 PLFVEVTKKMAKEFPDVPKIAYVIGPYTLVGLMTGAENT----VINSMM--EVEFVHEEL 145
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
+F +V Y A I AG D + I + A L FE ++ V ++ +KY N
Sbjct: 146 NFAVEVIKRYGDALIEAGADALCILEPTATVLSPAMFEEFSGNYVKQL-----KKYWNYP 200
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP--MRLVVGN 298
I G L T + + LD V L ++ + GNL+P
Sbjct: 201 TILHICGNTTHLIPSMVKTGCDGLSLDSDVSLRDVKFQIPDGVLIIGNLNPVSTVAYGKR 260
Query: 299 QVMIDGVNAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + +++ + + + G I D +N+ + R
Sbjct: 261 EQVEKEIRRLIEDMKDKKHFVLSSGCDIPGDADLENIQLMFDVARG 306
>gi|255527426|ref|ZP_05394299.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296187455|ref|ZP_06855850.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|255508872|gb|EET85239.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296047977|gb|EFG87416.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 354
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/308 (16%), Positives = 118/308 (38%), Gaps = 20/308 (6%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPI---TTQ 104
+C+ + V+ + + + FD A + ++ IA+A+G + + +N+ P +D
Sbjct: 45 LCFDYKLMVDTEINSYKTFGFDGAGIGPNLFGIAEAMGTTLAYPDNDMPYIDIPFLKNYD 104
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDH 163
+I L P L ++ I+ +K+ + + + G P+T A+ + F++D
Sbjct: 105 DIKKLIPVNPHKDGRLPLFLEACKIINEKIGSEVGVSSGLGGPFTTAASLRGTDVFLRD- 163
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENY 221
+N + LL+ ++ Y+ A GV + + A + +F +
Sbjct: 164 ------IIKNPEWVHKLLEISTESIFNYIDAVSDIGVK-PSLAEPVASLTVISPKQFRTF 216
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQ 280
+ + + + ++ + I + ++ T + I +D V + +
Sbjct: 217 VKPYLKKCVDKIIERWGSGPSIHICGNTKGIWEDIAD-TGAQVISVDNVVDMEEVKNSVG 275
Query: 281 KEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLD 336
+ GN+ P G + + + V + FI + G I + +NV
Sbjct: 276 NRSIIMGNVKPIDTVCFGGKEEIFNEVKECIKKSYDSPKGFILSTGCKIPMKTSKENVEL 335
Query: 337 LVKTVRSE 344
++ R+
Sbjct: 336 FMQAARTY 343
>gi|119627413|gb|EAX07008.1| uroporphyrinogen decarboxylase, isoform CRA_b [Homo sapiens]
Length = 131
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 86 RNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
V V +GP +P+ ++ + ++ + L +FQ+I++ R++L + LIGF
Sbjct: 1 MEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFA 60
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
GAPWT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG V
Sbjct: 61 GAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQV 118
>gi|288932119|ref|YP_003436179.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
gi|288894367|gb|ADC65904.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
Length = 355
Score = 130 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 56/352 (15%), Positives = 128/352 (36%), Gaps = 30/352 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF-LDMCYTPEYTVELTLQPI 63
K++ L+ ++ ++ PP+ Q + +K F D PE L
Sbjct: 16 KERFLKAVKLKKVDRPPVLSANQTATI-----EQMEKLGIFYKDAYSNPEKLATLASAAW 70
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEG--PRMDPITTQEIYLLN-PNIDLFLNYL 120
+ + V A+A G V + + + P + + P L +
Sbjct: 71 EELGLEGVGVPFCQTVEAEAFGLEVNWGKKKSSIPVVSFKGCVAPEGIEVPENFLERGRI 130
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ +I IL +K + + ++G P+++A+++ + + + + +
Sbjct: 131 PIVLDAIEILAEKYGDFLPVLGHVIGPFSLAAHIA------NIEKILKMSIKKPKLVEEF 184
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQI---FDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
+ D AEY A G D I I F + A +G + +A ++I ++
Sbjct: 185 TEMGLDAIAEYAKAMRDRGADAIVIENMFAS-ADVIGAKNYAKFAKPFDRKLIRKIK--- 240
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL-- 294
+ ++++ T + + +D FA+E+ + + + GN+D +
Sbjct: 241 -GITILHICGDCTSIIEDMVE-TKATCLSIDSKTDARFAVEISRGKAAIMGNIDTIYTLP 298
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + ++ I G ++P +NV +V+TV+ +
Sbjct: 299 FGKPEDVEAETLRAIEAGID---IIAPGCSLSPLTPNRNVRVMVETVKKISV 347
>gi|225563004|gb|EEH11283.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 111
Score = 129 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
+ +L +G + PPIW+MRQAGRYLPEY Q++ + +F + C +PE LTLQPI
Sbjct: 9 KNDLLLRAARGEKVERPPIWVMRQAGRYLPEYHQVKGQ-HDFFECCRSPEIASTLTLQPI 67
Query: 64 RRYN--FDAAILFSDILVIADALGRNVRFVENEGPRMDPITT 103
RY DAAI+FSDILVI G + R E P++ P+T
Sbjct: 68 ERYAGLIDAAIIFSDILVIPTGHGHDCRDDRQERPQL-PLTP 108
>gi|150402004|ref|YP_001329298.1| methylcobalamin:coenzyme M methyltransferase [Methanococcus
maripaludis C7]
gi|150033034|gb|ABR65147.1| methyltransferase MtaA/CmuA family [Methanococcus maripaludis C7]
Length = 342
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/363 (19%), Positives = 138/363 (38%), Gaps = 42/363 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M + K+++ + L+G ++ P +M G Y PE
Sbjct: 1 MIKPKERLSKALKGEEVDRIPCICPGGMMNMITKDIMDITGVYWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
E V+LT+ F+ + + V A+++G V+ + PR+ PI +
Sbjct: 49 -TDAEKMVKLTVGMYENGGFENYGVPFCMTVEAESMGAGVKMGTDITEPRVTNYPIDSVT 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y +I++ + ++I +L+ K + + +I P + AS ++ + + +
Sbjct: 108 EYEKLNHINIDEGRGKTVLEAIELLKDK-KSEVPIIANLTGPVSTASSLME--PVTYYKE 164
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
R + A +DF+++ E+ AQ++AG DV+ I D LG F+ +A
Sbjct: 165 LR----RKPDAAKEFMDFVTENLIEFGKAQLNAGADVLAISDPSGTGEILGPKMFKEFAI 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ +II + I + + L S+AI D + +E
Sbjct: 221 PYLNKIIEETKDLAETGTIIHICGRLKSVYEEINSL-KSDAISFDSITDVGQVVENVSRK 279
Query: 284 PVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN+ L + + A + G I + GI + +N+ +V +
Sbjct: 280 AIMGNVSTFTLENGTPESIERMSRACIK-YGVD--ILSPACGIGVRTKLENIQAMVNVCK 336
Query: 343 SEK 345
+ K
Sbjct: 337 NSK 339
>gi|298673991|ref|YP_003725741.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298286979|gb|ADI72945.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/358 (17%), Positives = 120/358 (33%), Gaps = 46/358 (12%)
Query: 1 MNERKQKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
MN R ++L L+G ++ P + LMR PE
Sbjct: 1 MNPR-DRLLNCLKGKKVDIVPALSVTQTATVELMRMTDSEWPEAH-------------SD 46
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYL 108
PE V+L + +A + V+A+A+G V + P + +P +
Sbjct: 47 PEKMVKLAVSGHEIAGLEAVRYPFCLTVLAEAMGCEVNMGAMDIQPSIVSNPYSNNSDIP 106
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P+ + + + ++R KL ++ +I P T+ ++++ +
Sbjct: 107 QIPDDLEKRGRIPVMLEVAELIRDKLDENVPIIAGLVGPATLTAHLM---GTSNFLIG-- 161
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSV 226
+ L+ +D+ + + G DV+ + D AG + FEN+
Sbjct: 162 -LIKKPEYVRQFLEVSTDICIRHANNLLEHGADVVCVPDGTAGPDLIDPAMFENFIKPEY 220
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-VPLSFALELQKEGP- 284
R V+ K +L+ I ++ + L A E+ +
Sbjct: 221 QRFCRDVK----GFKVSHMCGDINAILEPLSE-CGFEGISVEEKIIDLQTAKEILGDKSK 275
Query: 285 VQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+ L+ + + L+ + G GI P KN+ LV
Sbjct: 276 LIGNVSTSGTMLMRSYDDVKNEAKNCLEEGVD---VLAPGCGIAPNTPLKNIKALVDA 330
>gi|153867896|ref|ZP_01998089.1| Uroporphyrinogen decarboxylase [Beggiatoa sp. SS]
gi|152144784|gb|EDN71911.1| Uroporphyrinogen decarboxylase [Beggiatoa sp. SS]
Length = 126
Score = 128 bits (322), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVGNQVMIDGV 305
K L+ R NA+GLDW +P+S A + + +QGN+DP L + + + V
Sbjct: 22 KAGNEWLEPDCRDRPVNALGLDWKLPISMARDRVGDQVALQGNMDPCILYASPERIREEV 81
Query: 306 NAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL G G +FNLGHGI P +DP++V ++ V +
Sbjct: 82 ATILASFGKGNGHVFNLGHGIHPTIDPEHVSAFIEAVHTLS 122
>gi|254445349|ref|ZP_05058825.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198259657|gb|EDY83965.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 455
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/349 (22%), Positives = 131/349 (37%), Gaps = 31/349 (8%)
Query: 5 KQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
K+ +L L+ P W + G L I K++L+ + E+ V
Sbjct: 4 KEILLRALKCEATPRVP-WVPFVGVHGGAL-----IGVDAKDYLE---STEHIVSGLKAS 54
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYL 120
+RY D + D+ + A+ LG + + + P + P+ P + + L
Sbjct: 55 AKRYRPDGLPVVFDLQLEAEVLGCQLAWAQETPPAVISHPLDAGYAIKALPTLSVEKGRL 114
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
Q+I +K+L I L G P T+A ++ + D + L
Sbjct: 115 PLALQAIRETKKELGEEIALYGLLTGPLTLALHLRGDDVLLD-------MFDEEEGVVAL 167
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
LD+ ++++ + + A + AG+DVI + D +G F ++ A + + S VR+K A
Sbjct: 168 LDYCAEIANQMVDAYLDAGIDVIAVVDPMISQIGPSHFTDWVAPRLDEVFSYVRKK--GA 225
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF----ALELQKEGPVQGNLDPM--RL 294
F G T + I +D +V L+ A K GNL L
Sbjct: 226 LSSLFVCGNATRNLAAMCATQCDNISVDENVDLAELAKVARAAGKSFG--GNLQLTKILL 283
Query: 295 VVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V LD G G FI G + V P+N+ + V
Sbjct: 284 LGDEADAKREVVRCLDQAGDGGGFILAPGCDLPYAVKPENLEAVAALVH 332
>gi|45358394|ref|NP_987951.1| methylcobalamin:coenzyme M methyltransferase [Methanococcus
maripaludis S2]
gi|44921152|emb|CAF30387.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 342
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/363 (19%), Positives = 133/363 (36%), Gaps = 42/363 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ + L+G ++ P +M G Y PE
Sbjct: 1 MITPKERLSKTLKGEKVDRIPCICPGGMMNMITKDIMDITGVYWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
E +LT+ F+ + + V A+A G V+ + PR+ PI +
Sbjct: 49 -TDAEKMAKLTIGMYENGGFENYGVPFCMTVEAEAFGAGVKMGTDITEPRVTNYPIDSVT 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y +I++ + +SI IL++K + + +I P + AS ++ + + +
Sbjct: 108 EYEKLNHINIDEGRGKTVLESIEILKEK-NSEVPIIANLTGPVSTASSLME--PVTYYKE 164
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
R + A +DF+++ E+ AQ+ AG DV+ I D LG F+ +A
Sbjct: 165 LR----RKPEAAKEFMDFVTENLIEFGKAQLKAGADVLAISDPSGTGEILGPKMFKEFAV 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ +II I + L S+AI D + +E
Sbjct: 221 PYLNKIIEETSDLAETGTIIHICGRLKSVYAEINSL-KSDAISFDSITDVGQVVENVSGK 279
Query: 284 PVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN+ L + A + G I + GI + +N+ +V+ +
Sbjct: 280 AIMGNVSTFALENGTPDSIDKMSKACIK-FGVD--ILSPACGIGVRTKLENIQAMVQACK 336
Query: 343 SEK 345
+ K
Sbjct: 337 NSK 339
>gi|83591166|ref|YP_431175.1| methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
gi|83574080|gb|ABC20632.1| Methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
Length = 349
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 74/361 (20%), Positives = 125/361 (34%), Gaps = 43/361 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M ++ + L L G ++ P+ LM + G Y P D
Sbjct: 8 MTPKR-RFLSALFGGRVDRTPVANPTSLVTVELMERTGAYFP-------------DAHLD 53
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRM--DPITTQEIYL 108
E L FD + + ALG V + + P PIT E +
Sbjct: 54 AEKMARLAATSYEVLGFDTIMPVFSAHTESAALGVPVDWGDKMSWPVNTSHPITDPEQIV 113
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
+ P+ L + + +I ILR + + + +IG PW++A +++ ++ +
Sbjct: 114 I-PDSFLEEPSMRTVLDAIKILRSQYGDRVAIIGKTYGPWSLAYHLV---GTENFLMETI 169
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL-GEHEFENYAARSVG 227
N L+ L + S AQI AG D I D G L + ++ +
Sbjct: 170 L---NPDKARRYLEVLLEASLLSAKAQIKAGADAILWGDHATGDLVSAEYYRDFLMKVHQ 226
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQ 286
+ V A I G Y +A D V A EL + +
Sbjct: 227 YVTREV-----GAPIILHICGNTTKFIPYIVEAGFDAFHFDSKVDAKLAKELAGNKMSLI 281
Query: 287 GNL-DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GN+ +P+ L+ G D L + +G I I +N+L + +T + +
Sbjct: 282 GNINNPVTLLAGTP--EDVKKETLYAIEAGVEIVGPECAIPLTTPLENILAITETAKEYQ 339
Query: 346 I 346
I
Sbjct: 340 I 340
>gi|270488928|ref|ZP_06206002.1| uroporphyrinogen decarboxylase domain protein [Yersinia pestis KIM
D27]
gi|270337432|gb|EFA48209.1| uroporphyrinogen decarboxylase domain protein [Yersinia pestis KIM
D27]
Length = 97
Score = 126 bits (318), Expect = 4e-27, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 257 RRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG 315
T +A+GLDW+ ++ A + + +QGN+DP L + V+ IL G G
Sbjct: 1 MAATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLYAPPARIEQEVSTILASFGQG 60
Query: 316 -PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+FNLGHGI V P + V V +
Sbjct: 61 EGHVFNLGHGIHQDVPPAHAGAFVNAVHALS 91
>gi|296132005|ref|YP_003639252.1| methyltransferase MtaA/CmuA family [Thermincola sp. JR]
gi|296030583|gb|ADG81351.1| methyltransferase MtaA/CmuA family [Thermincola potens JR]
Length = 349
Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/366 (18%), Positives = 133/366 (36%), Gaps = 47/366 (12%)
Query: 1 MNERKQKILEVLQGNVINPP-------PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPE 53
M + Q++L +L+G ++ P +W G L Y NF D + PE
Sbjct: 4 MTSK-QRVLGLLKGETVDRPACYSGTGTVW-----GAALKHY------GYNFADAHHDPE 51
Query: 54 YTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF----VENEGPRMDP---ITTQEI 106
L P F+ A++ DI V A+ LG ++ + E+ P + + EI
Sbjct: 52 KMARLATFPFEAAGFECALMPFDICVEAELLGCDINYFSNSDESIYPNIKKRLIMKPNEI 111
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
+ + + + +I + + HI + P+T+A++++ D +
Sbjct: 112 EGVEVPDHVMGGRVPVVCNAIRQAKAEFGQHIPIGAHILGPFTLATHLM------DFNEL 165
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAAR 224
+ ++ + LL+ L+ V A AG D I + + + +F
Sbjct: 166 LMTVFRKPDLVSGLLEKLAGVLMNVARAYEEAGADYICLREMSGTTDIVSPKQFNELLRP 225
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
+ +II R + G + Y +++AI ++ L + GP
Sbjct: 226 ELVKIIQNCR-----VPVVLHICGNTNKIVQYMVECNAHAISVETRNDLVRTRQDIGNGP 280
Query: 285 VQ-GNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ GN+D ++ + + V L + G I+ + +N+ +V+ V
Sbjct: 281 LVFGNIDGFGVLVKGTPEEVEQEVIKCLRNGVDALW---PGCEISLKAPLENLRAMVRAV 337
Query: 342 --RSEK 345
Sbjct: 338 EKHGHS 343
>gi|294495197|ref|YP_003541690.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
gi|292666196|gb|ADE36045.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
Length = 346
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 61/357 (17%), Positives = 117/357 (32%), Gaps = 50/357 (14%)
Query: 5 KQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
KQ+ L+ L G ++ P+ LM G + PE Y E
Sbjct: 7 KQRFLDSLAGKDVDKVPVCSVTQTGTIELMEATGSHWPEAH-------------YDAEKM 53
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE---GPRM--DPITTQEIYLL- 109
L + +A D IA L E P + +P + +E
Sbjct: 54 ASLAIGGYEVAGLEAVRYPFDGTAIAQTL--GCTIKEGTFDSQPSVLDNPCSNKEDVGKF 111
Query: 110 -NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P+ L + I + I+R+++ I ++ P +A ++ K++
Sbjct: 112 NLPDNFLESQRISTILDATEIVRERVGEDIPVVAGMLGPAAIAISLV---GAKNYLM--- 165
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSV 226
++ LL ++ EY A G D I + D+ AG L FE+
Sbjct: 166 WSLTEPETIRELLGMGVEICVEYSNALFERGADAICMPDSEAGPDLLPPEIFESLVLPEY 225
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPV 285
+I S+ + I G + + + ++ V +A + +
Sbjct: 226 DKICSST-----DGPMILHMCGDATAILEPMACSGFEGLSIEEKVDAKYAKRIIGDRACL 280
Query: 286 QGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GN+ P+ ++ + + ++ I G G+ P +N+ V+
Sbjct: 281 IGNVSPVDILLSTPAEEVKRQAKMCVEDGVD---ILAPGCGLAPYTSLENLKAFVEA 334
>gi|114565974|ref|YP_753128.1| methylcobalamin:coenzyme M methyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114336909|gb|ABI67757.1| uroporphyrinogen decarboxylase (URO-D) [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 348
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 67/363 (18%), Positives = 127/363 (34%), Gaps = 49/363 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI------------WLMRQAGRYLPEYRQIRKKFKNFLDM 48
M + ++++ L G VI+ P +M++ G + PE
Sbjct: 1 MITPQDRLIKALNGQVIDRSPCICPGGMMNMATTEIMQRVGSHWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL 108
P+ L L + + + V A+A+G V N G + E L
Sbjct: 49 -KKPQDMARLALGVCHLTGMENLGVPFCMTVEAEAMGAKV----NLGSLANEPRVAEYPL 103
Query: 109 LNPNIDLFLNYLLP-------IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
+ L+ + P + +++S L + +I P ++AS +I
Sbjct: 104 MKLEDWETLSGINPGEGRAGIVAEAVSYLTSS-KTELPVIANLTGPISLASSLIE----- 157
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFE 219
+ + + L F++D + + + AG +I I D LG F
Sbjct: 158 PMVFFKAMGKK-PELVHEFLYFVTDNLIVFGRSMLQAGAQIINIADPGGTEEILGPRHFA 216
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+A + RI++ ++ +Y A + + +L +NAI +D + +S
Sbjct: 217 EFALPYINRILNELQGEY-QASMVHICGRLQSIFTEINQLA-TNAISIDSTTSISKLRSA 274
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+E V GN+ L + + L G I + GI+P N+ +V
Sbjct: 275 LREKVVVGNISTYLLQNAQPGRVKATG--FNCLRKGITILSPACGISPATPLANLQAMVS 332
Query: 340 TVR 342
V
Sbjct: 333 AVH 335
>gi|32479637|emb|CAE02690.1| putative methyltransferase [Methanococcus voltae]
Length = 365
Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 60/366 (16%), Positives = 134/366 (36%), Gaps = 49/366 (13%)
Query: 1 MNERKQKILEV---LQGNVINPPPI------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M ++ + G ++ P + R +G K +F
Sbjct: 5 MKDKMTPLQRAKAKANGEAVDRLPCNPNLSNGIARISG----------CKISDF---NKD 51
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEI 106
P + + RR+ D A +F+D+ ++++A+G ++ +++ P ++ I+ +
Sbjct: 52 PRALADAVIATYRRFGADGAKVFTDLFLLSEAMGAKMKMPDDDTVDLLEPAINDISEID- 110
Query: 107 YLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
P ID + + LPI +++ + ++L + + P+T A ++I +
Sbjct: 111 --KIPLIDPYKDARLPIHLKAMEYVHEELKDEVPCTALIVGPFTNACFIIG------VEK 162
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
++ + + L + + + A I GV I I + A + F Y A
Sbjct: 163 MTKLMIKDPESVHKLCEISLENCIRFTDAAIKTGV-GISIAEPMASCTVISPKHFREYCA 221
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
+ + + V+ K I + + + NA +D + + +
Sbjct: 222 PYLSKYVDFVKSKLNGVS-IHICGQTKAIWTDIADM-GINAFSIDDIADMEDCVNTIGDR 279
Query: 283 GPVQGNLDPMR-LVVG-NQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDL 337
V GN+DP + G + + V + G I + G G+ + +N+ +
Sbjct: 280 MVVTGNVDPSAVMYAGTKEEVRKAVIKSVQQGYKAKKGYGIMS-GCGLPVETPIENIDVM 338
Query: 338 VKTVRS 343
+ T R
Sbjct: 339 MDTARE 344
>gi|33943593|gb|AAQ55472.1| hypothetical protein [Methanococcus voltae PS]
Length = 365
Score = 125 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 60/366 (16%), Positives = 134/366 (36%), Gaps = 49/366 (13%)
Query: 1 MNERKQKILEV---LQGNVINPPPI------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M ++ + G ++ P + R +G K +F
Sbjct: 5 MKDKMTPLQRAKAKANGEAVDRLPCNPNLSNGIARISG----------CKISDF---NKD 51
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEI 106
P + + RR+ D A +F+D+ ++++A+G ++ +++ P ++ I+ +
Sbjct: 52 PRALADAVIATYRRFGADGAKVFTDLFLLSEAMGAKMKMPDDDTVDLLEPAINDISEID- 110
Query: 107 YLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
P ID + + LPI +++ + ++L + + P+T A ++I +
Sbjct: 111 --KIPLIDPYKDARLPIHLKAMEYVHEELKDEVPCTALIVGPFTNACFIIG------VEK 162
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
++ + + L + + + A I GV I I + A + F Y A
Sbjct: 163 MTKLMIKDPESVHKLCEISLENCIRFTDAAIKTGV-GISIAEPMASCTVISPKHFREYCA 221
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
+ + + V+ K I + + + NA +D + + +
Sbjct: 222 PYLSKYVDFVKSKLNGVS-IHICGQTKAIWTDIADM-GINAFSIDDIADMEDCVNTIGDR 279
Query: 283 GPVQGNLDPMR-LVVG-NQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDL 337
V GN+DP + G + + V + G I + G G+ + +N+ +
Sbjct: 280 MVVTGNVDPSAVMYAGTKEEVRKAVIKSVQQGYKAKKGYGIMS-GCGLPVETPIENIDVM 338
Query: 338 VKTVRS 343
+ T R
Sbjct: 339 MDTARE 344
>gi|114565972|ref|YP_753126.1| uroporphyrinogen decarboxylase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336907|gb|ABI67755.1| Uroporphyrinogen decarboxylase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 357
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 119/305 (39%), Gaps = 18/305 (5%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPI-TTQEIY 107
++ + + + + D A + L +A+A+G +++ E+ P +P+ + +
Sbjct: 50 HSAKLMARVETVTYKMFGHDGAGVGPGFLALAEAMGTELKYPEDNIPFVANPVLKNWDDF 109
Query: 108 LLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
D + LPI+ +++++++ + + + + G P+T A+ + ++ ++
Sbjct: 110 DKLEPADPHKDGKLPIYLEALAMIKDAIGDEVPIGSSVGGPFTTAALV---RGTENFLKD 166
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAAR 224
+N + LL +++ + Y+ A + G + I D A L +F +A
Sbjct: 167 ---LRRNPEMAHRLLQLVTNTTLNYIDAVMDMGCS-VSIGDPTASGSLLSVKQFREFAKP 222
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEG 283
+ ++ V + + + + + T + + LD + L+ A + + +
Sbjct: 223 YLSKLADRVIERTGKGPMLHICGDSTPIWSDMAD-TGAPTLSLDNVIDLAEAKKVVGERV 281
Query: 284 PVQGNLDP--MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVK 339
+ GN+ P + +Q + V L FI +G + N + +
Sbjct: 282 CIMGNVKPIDTIMKGSHQQIEAEVKECLRKAYDSPKGFILAVGCQVPLGTTADNFMCFMN 341
Query: 340 TVRSE 344
R
Sbjct: 342 AARKY 346
>gi|125975267|ref|YP_001039177.1| MtaA/CmuA family methyltransferase [Clostridium thermocellum ATCC
27405]
gi|256003074|ref|ZP_05428066.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|125715492|gb|ABN53984.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum ATCC
27405]
gi|255992765|gb|EEU02855.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|316939429|gb|ADU73463.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
1313]
Length = 372
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 23/305 (7%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
+ + + R + +D +F+D+ V A+A+G V + + E P ++ E
Sbjct: 48 NGKLLAKAHVAAYRMFGYDIIRVFTDLYVQAEAMGAKVHYPYDQTAYLEAPAIN--DVSE 105
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
I L P L +++ I+ +++ + +T+ G P+T AS++I
Sbjct: 106 IDSLEPADPYKDGNLPHHLEAMKIVAEEVGDEVTVAGAVTCPFTNASFLIGA------EN 159
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
++ + L + + S Y A I AG + D + + +F+ ++
Sbjct: 160 LVRLTLKDPEKVHRLCEISLETSLRYAKAIIDAGC-TPSLTDPMSSNTVISPKQFKEFSF 218
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKE 282
+ R+I + + + K ++ I +D L A ++ +
Sbjct: 219 PYLKRLIDYIHSRGKSVTLHICGKTNKIW--ELMAEAGADCISIDNDASLLEAKQKIGHK 276
Query: 283 GPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLV 338
+ GN+ P L + V + P +I G + N+ ++
Sbjct: 277 VRLMGNVKPSETMLQGTVSDVKKAVFECVRQAYDNPKGYIVASGCSLPTDTPFSNIHAMM 336
Query: 339 KTVRS 343
VR
Sbjct: 337 DAVRE 341
>gi|281419256|ref|ZP_06250272.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
gi|281407122|gb|EFB37384.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
Length = 372
Score = 124 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 110/305 (36%), Gaps = 23/305 (7%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
+ + + R + +D +F+D+ V A+A+G V + + E P ++ E
Sbjct: 48 NGKLLAKAHVAAYRMFGYDIIRVFTDLYVQAEAMGAKVHYPYDQTAYLEAPAIN--DVSE 105
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
I L P L +++ I+ +++ + +T+ G P+T AS++I
Sbjct: 106 IDSLEPADPYKDGNLPHHLEAMKIVAEEVGDEVTVAGAVTCPFTNASFLIGA------EN 159
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
++ + L + + S Y A I AG + D + + +F+ ++
Sbjct: 160 LVRLTLKDPEKVHRLCEISLETSLRYAKAIIDAGC-TPSLTDPMSSNTVISPKQFKEFSF 218
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKE 282
+ R+I + + + K ++ I +D L A ++ +
Sbjct: 219 PYLKRLIDYIHSRGKSVTLHICGKTNKIW--ELMAEAGADCISIDNDASLLEAKQKIGHK 276
Query: 283 GPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLV 338
+ GN+ P L + V + P +I G + N+ ++
Sbjct: 277 VRLMGNVKPSETMLQGTVSDVKKAVFECVREAYDNPKGYIVASGCSLPTDTPFSNIHAMM 336
Query: 339 KTVRS 343
VR
Sbjct: 337 DAVRE 341
>gi|297620099|ref|YP_003708204.1| Uroporphyrinogen decarboxylase [Methanococcus voltae A3]
gi|297379076|gb|ADI37231.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus voltae A3]
Length = 361
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/366 (16%), Positives = 135/366 (36%), Gaps = 49/366 (13%)
Query: 1 MNERKQKILEV---LQGNVINPPPI------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M ++ + G I+ P + R +G + E+
Sbjct: 1 MEDKMTPLQRAKAKANGESIDRLPCNPNLSNGIARISGCKISEFN-------------ND 47
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPITTQEI 106
P + + RR+ D A +F+D+ ++++A+G ++ +++ P ++ I+ +
Sbjct: 48 PRALADAVIATYRRFGADGAKVFTDLFLLSEAMGAKMKMPDDDTVDLLEPAINDISEID- 106
Query: 107 YLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
P ID + + LPI +++ + ++L + + P+T A ++I +
Sbjct: 107 --KIPLIDPYNDARLPIHLKAMEYVYEELKDEVPCTALIVGPFTNAFFIIG------VEK 158
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
++ + + L + + + A I GV I I + A + F + A
Sbjct: 159 MTKLMIKDPESVHKLCEISLENCIRFTDAAIKTGV-GISIAEPMASCTVISPKHFREFCA 217
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKE 282
+ + + ++ K I + + + NA +D L A ++
Sbjct: 218 PYLSKYVDFIKSKLNGVS-IHICGQTAAIWTDIADM-GINAFSIDDIADLEDCASKIGDR 275
Query: 283 GPVQGNLDPMR-LVVG-NQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ GN+DP + G + + V + G I + G G+ + +N+ +
Sbjct: 276 MVITGNVDPSAVMYAGTKEEVRKAVLKCVQQGYKAKKGYGIMS-GCGLPVETPIENIDVM 334
Query: 338 VKTVRS 343
+ T R
Sbjct: 335 MDTARE 340
>gi|20092413|ref|NP_618488.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19917669|gb|AAM06968.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 346
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/353 (18%), Positives = 120/353 (33%), Gaps = 38/353 (10%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L L GN + P + Q G E + ++ + PE L L
Sbjct: 6 RKNFLNALCGNPVGMTPALSVTQTGTV--ELMDLTD--ASWPEAHSDPEKMATLALAGHE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDLFLNYLL 121
+A + V+A+ +G NVR ++ P + P + L P L +
Sbjct: 62 IAGLEAVRYPYCLTVLAETMGCNVRMGTKDIQPSVLSHPFSEGPEKLKVPEALLEKGRIP 121
Query: 122 PIFQSISILRKKLPNH-----ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ ++ IL + + LI P TV +++ +K++ ++ +
Sbjct: 122 IVLKATEILAARAGEENGKEEVPLIAGMEGPLTVFTHLAE---VKNYL---IWTIKKPDY 175
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC-----LGEHEFENYAARSVGRIIS 231
N ++ +++ EY A + G D + + D G + EN R+
Sbjct: 176 VNAFMETCTEICIEYANALLDCGADTLSMPD--GGIVGSRMMPPSVLENSVKPFYKRLCK 233
Query: 232 AVRRKYPNAKFI-SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNL 289
V+ I G L AI ++ V L A E+ + GN+
Sbjct: 234 KVKG-----PVILHICGDVGDSLGTLSE-CGFEAISIEEKVSLKAAKEVIDGRARLIGNV 287
Query: 290 DPMR--LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P R L + + L I G GI P+ N+ LV+
Sbjct: 288 SPSRTLLFGTPEAVKAEAKQCLSDGVD---ILAPGCGIAPRTPLANIRALVEA 337
>gi|257065294|ref|YP_003144966.1| methyltransferase, MtaA/CmuA family [Slackia heliotrinireducens DSM
20476]
gi|256792947|gb|ACV23617.1| methyltransferase, MtaA/CmuA family [Slackia heliotrinireducens DSM
20476]
Length = 341
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 70/359 (19%), Positives = 138/359 (38%), Gaps = 39/359 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL------MRQAGRYLPEYRQIRKKFKNFL-DMCYTPE 53
M K+++L L G + PP M G ++ + F + Y PE
Sbjct: 1 MTTAKERLLATLDGKETDRPPCICPGGMMNMVTVG--------LQDEIGVFFPEAHYDPE 52
Query: 54 YTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMD--PITTQEIYLLN 110
L R F+ + + V ++A+G V ++ P + I Y
Sbjct: 53 KMAALAKAVYDRGFFENYGVPFCMSVESEAMGAEVTIGRKDVEPHITGYAIFDVHDYKQV 112
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+DL + ++I IL+ + + ++G P +VAS ++ D +
Sbjct: 113 KPMDLESGRAKTVIEAIKILKT-YDDGVPIVGNLVGPVSVASSVM------DPVKYYKQL 165
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVGR 228
Y+ + +DF+++ + +AQ+ AG DVI I D +G F+ YA + +
Sbjct: 166 YKEKELSHAYMDFITNELIRFGLAQVEAGADVIAIADPSGTGEIMGPRSFDQYAVTYLEK 225
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+ A++ + + + +++ NA+ D VP+ A + V GN
Sbjct: 226 LQKALQDAGART-IVHICGQMRSVYEQVAKIS-CNALSFDAVVPIKEARKNLPGRVVMGN 283
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFI----FNLGHGITPQVDPKNVLDLVKTVRS 343
+ + + + + + + + +G I LG G +NV +++TVR
Sbjct: 284 VSTFAIELKDAERVRSLTRM--CMNNGSNIIAPACGLGMG----SPSENVRAVLETVRE 336
>gi|297620098|ref|YP_003708203.1| Uroporphyrinogen decarboxylase [Methanococcus voltae A3]
gi|297379075|gb|ADI37230.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus voltae A3]
Length = 362
Score = 123 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 60/366 (16%), Positives = 139/366 (37%), Gaps = 47/366 (12%)
Query: 1 MN-ERKQKILEV---LQGNVINPPPI------WLMRQAGRYLPEYRQIRKKFKNFLDMCY 50
M ++ + G I+ P + R AG + E+ +
Sbjct: 1 MTGDKMNPLQRAKAKANGESIDRLPCNPNIGNGIARIAGYKISEFN-------------H 47
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
+ + +Q + + D +F+D+ +IA+A+G V E+ E P +D ++ +
Sbjct: 48 NSDALADAVIQSYKIFGMDGTRVFTDLFLIAEAMGAKVNKPEDNTADLEEPAIDDVSKID 107
Query: 106 IYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+ ID + + +PI +++ +++++ + +++ P+T A ++I
Sbjct: 108 DLKI---IDPYNDGRIPIHLRAMKKVKEEIGDEVSVTASVVGPFTNAFFLIG------IE 158
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYA 222
+ ++ + + L + + A + GV + I + + + F Y+
Sbjct: 159 RMTKMLLKDPESVHKLCEISLKNCMKLTDAALEQGV-GVTISEPLSSCTVISPKHFRKYS 217
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQK 281
A + R+I +R K + + + + N + +D L A +
Sbjct: 218 APYLKRLIDYMRSKGIGNIVLHICGKTDPIWDDLVDM-GVNVLSIDDIADLKLCADRVGD 276
Query: 282 EGPVQGNLDPM-RLVVG-NQVMIDGV-NAILDVLG-SGPFIFNLGHGITPQVDPKNVLDL 337
+ V GN+DP + G + + +I + FI G + +V +N+ +
Sbjct: 277 KMAVAGNVDPSAIMYAGTKEQVRKATLKSIQEGYKAKKGFIVMSGCSLPVEVPIENIQVM 336
Query: 338 VKTVRS 343
+ TVR
Sbjct: 337 MDTVRE 342
>gi|307299030|ref|ZP_07578832.1| Uroporphyrinogen decarboxylase (URO-D) [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915455|gb|EFN45840.1| Uroporphyrinogen decarboxylase (URO-D) [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 318
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 20/290 (6%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYL 120
+ + D D+ V A+ALG V F E+ P + PI + N ++
Sbjct: 41 MEEFQPDGIFFMMDLTVEAEALGLEVGFPEDNNPYVKEHPIKGPDELSSVVNSWSGVSGR 100
Query: 121 LPIFQSIS-ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ +F ++ + ++LP + P ++A ++ + D ++
Sbjct: 101 MRVFTEVADKMARELPGKR--GSYVIGPLSLAGELV---GVTDLCMK---LIEDPAFAES 152
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
++DF S V +EY A I G D+I + + A L + +F+ +A R+ S + +
Sbjct: 153 VIDFSSRVVSEYSKALIDHGADMIAVLEPTAVLLSKRQFKRFALPYFERLRSELSK---- 208
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLV--V 296
I G + + + + LD V L A E + GN+DP+++
Sbjct: 209 -PLIYHICGDTEHIVEPMGASGAYGLSLDSMVDLKAAAERVPENVFIIGNIDPVKVFLQS 267
Query: 297 GNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + +L+ + P FI + G I + P+N+ + R+ +
Sbjct: 268 NEEEVERETEKLLEKMKDVPNFILSSGCDIPLETPPENISAFFRAGRNYR 317
>gi|302389281|ref|YP_003825102.1| Uroporphyrinogen decarboxylase (URO-D) [Thermosediminibacter oceani
DSM 16646]
gi|302199909|gb|ADL07479.1| Uroporphyrinogen decarboxylase (URO-D) [Thermosediminibacter oceani
DSM 16646]
Length = 354
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 63/350 (18%), Positives = 137/350 (39%), Gaps = 25/350 (7%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
E KQ++L++L+G + R + E+ + ++ PE + + +
Sbjct: 2 EGKQRVLKMLKGEPV--------RACSVFATEFWALNRRGYTIEKFLEDPEGLLSVIAEE 53
Query: 63 IRRYNFDAAILFSDIL-VIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLN-- 118
+++ + D + + V LG +F E P + P+ L N ++
Sbjct: 54 VQKIDSDIFFFLAGLTSVPLMVLGAMYKFPEKGPPVAEMPLVRSREELKNLDLKKISGDV 113
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ ++Q+ + L L + + AP+T A+ M+ ++ Y++ R
Sbjct: 114 RVKKLWQASAELTLALKDRTLVAVNIRAPFTQAAQMV---GPENFL---RLLYRDERFVL 167
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRK 236
LL+ +++ EY + I +G ++I I D A + FE Y + +I++ ++
Sbjct: 168 ELLEISTEIFLEYGLPFIESGAEMIYISDPTASGDLISRKHFEKYVYPCLKKIVTEIKGL 227
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRL- 294
+ G + R D + + +D V L A E+ ++ + GN+DP +
Sbjct: 228 --GIPVLLHICGDTIDRLDLIREIDPDIMSVDHKVDLEKAGEVLGEKICLAGNVDPSEVM 285
Query: 295 -VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ + L+ G+ F+ G I+P +N+ +
Sbjct: 286 EYGSREEVERKALECLEKAGNRKFLLMPGCEISPDTPLENIKTFLAVGHG 335
>gi|73669195|ref|YP_305210.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|72396357|gb|AAZ70630.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
Length = 341
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/350 (18%), Positives = 127/350 (36%), Gaps = 36/350 (10%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++ + L+G ++ P+ + Q G E + + + + + L L
Sbjct: 7 RERFEKALKGEAVDIIPVCSVTQTGTV--ELMETTGAY--WPQANFNADQMATLALAGYE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMD--PITTQEIYLLNPNIDLFL 117
F+ DI V+A+ LG V EG P + P ++ D L
Sbjct: 63 TAGFENVRCPFDITVLAETLGCTVD----EGSIDMQPYITDFPCKNEKDVKNITVPDSLL 118
Query: 118 N--YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +++ IL +K+ + ++ P +A + IK++ + +++
Sbjct: 119 EGRRTSVVLEAVEILNEKVGETVPVVAGVVGPAGLAFML---AGIKNY---ITWFVKDTE 172
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
L+ L+D EY + G I + D+ AG + FE + V
Sbjct: 173 VVEELMGVLTDACIEYANGLLERGAHAITLIDSEAGPDIISPKMFEESVFPLYRKFCRKV 232
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDP- 291
+ K + A +L + + I ++ V +SFA + + GN+ P
Sbjct: 233 K----GLKVLHMCGDATAVLNSLGD-AGFDGISIEEKVSVSFAKAAIGDRVRLIGNISPS 287
Query: 292 -MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L G + ++ A L+ I G G+ P +N+ LV+
Sbjct: 288 DTLLAKGPEAVLLEATACLEDGID---ILAPGCGLAPHTPLENIKALVRA 334
>gi|21226607|ref|NP_632529.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20904885|gb|AAM30201.1| Methylcobalamin:Coenzyme M methyltransferase MtbA [Methanosarcina
mazei Go1]
Length = 345
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 68/352 (19%), Positives = 119/352 (33%), Gaps = 37/352 (10%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++ L L GN +N P + Q G E + + + PE +L +
Sbjct: 6 RKNFLNALHGNPVNRIPALSVTQTGTV--ELMDMTGAA--WPEAHSDPEKMAKLAIAWHE 61
Query: 65 RYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEIYLLNPNIDLFLNYLL 121
F+A + V+A+ +G +VR ++ P + P + L P L +
Sbjct: 62 IAGFEAVHYPYCLTVLAETMGCDVRMGTKDIQPSVLSHPFSKGPENLGIPENLLEKGRIP 121
Query: 122 PIFQS----ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ ++ + ++ K I LI P TV +++ ++A + F
Sbjct: 122 AVLKATEILVDMIENKKGRKIPLIAGMEGPLTVFTHIAE------IKNCLIWALKKPDYF 175
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC-----LGEHEFENYAARSVGRIISA 232
N ++ +++ EY G D + + D G + E+ R+
Sbjct: 176 NTFMETCTELCIEYASTLFDHGADALCMPD--GGIVGSRMMPPSVLEDSVKPFYKRLCRK 233
Query: 233 VRRKYPNAKFI-SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLD 290
V N I AG L+ AI ++ V L A E + + GN+
Sbjct: 234 V-----NGPVILHICGDAGDSLRTLSE-CGFEAISIEEKVSLKAAKEAIGDRARLIGNVS 287
Query: 291 PMR--LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
P R L + L I G GI P N+ LV+
Sbjct: 288 PSRTLLFGTPDAVKAEAKQCLSAGVD---ILAPGCGIAPGTPLSNIRALVEA 336
>gi|170755395|ref|YP_001781126.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|169120607|gb|ACA44443.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum B1 str. Okra]
Length = 350
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/313 (16%), Positives = 124/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIKLTRDALMDEVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + IS ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALRKNISKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVVGN--QVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V G + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDIVYGGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|289808607|ref|ZP_06539236.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 90
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFN 320
+A+GLDW+ ++ A + + +QGN+DP L + D V IL G G +FN
Sbjct: 1 DALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAPPARIEDEVATILAGFGQGEGHVFN 60
Query: 321 LGHGITPQVDPKNVLDLVKTVR 342
LGHGI V P++ V+ V
Sbjct: 61 LGHGIHQDVPPEHAGAFVEAVH 82
>gi|322805814|emb|CBZ03379.1| methylcobalamin:coenzyme M methyltransferase,methylamine-specific
[Clostridium botulinum H04402 065]
Length = 340
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 130/367 (35%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -TDPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHKFMNFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RI+ ++ I + K L S+ + D ++ L+ +
Sbjct: 220 IPYLNRIVDELKDYADGT-IIHICGRLKSIYKELNDL-HSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTI---QNSTKEEVEKLANAC------MNLGVDILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVNAAK 335
>gi|148379460|ref|YP_001254001.1| methylcobamide:CoM methyltransferase [Clostridium botulinum A str.
ATCC 3502]
gi|153931210|ref|YP_001383839.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. ATCC 19397]
gi|153936333|ref|YP_001387389.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. Hall]
gi|148288944|emb|CAL83031.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|152927254|gb|ABS32754.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152932247|gb|ABS37746.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. Hall]
Length = 350
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIKLTRDALMDEVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALRKNINKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDIVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|168180147|ref|ZP_02614811.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
gi|226948825|ref|YP_002803916.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
gi|182669159|gb|EDT81135.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
gi|226841589|gb|ACO84255.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
Length = 350
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKIVDPLKDGNLPTLL---EAIKLTRDALMDEVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALRKNINKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDIVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|159906205|ref|YP_001549867.1| methylcobalamin:coenzyme M methyltransferase [Methanococcus
maripaludis C6]
gi|159887698|gb|ABX02635.1| methyltransferase MtaA/CmuA family [Methanococcus maripaludis C6]
Length = 342
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/363 (18%), Positives = 132/363 (36%), Gaps = 42/363 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ + G ++ P +M G Y PE
Sbjct: 1 MITPKERLSKAPTGEEVDRIPCICPGGMMNMITKDIMDITGVYWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
E +LT+ F+ + + V A+++G V+ + PR+ PI +
Sbjct: 49 -TDAEKMAKLTVGMYENGGFENYGVPFCMTVEAESMGAGVKMGTDITEPRVTNYPIDSVT 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y +I++ + +SI IL+ K + + +I P + AS ++ + + +
Sbjct: 108 EYGKLNHINIDEGRGKTVLESIEILKDK-KSEVPIIANLTGPVSTASSLME--PVTYYKE 164
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
R + A +DF+++ E+ AQ+ +G DV+ I D LG F+ +A
Sbjct: 165 LR----RKPEAAKEFMDFVTENLIEFGKAQLKSGADVLAISDPSGTGEILGPKMFKEFAI 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ +II + I + L S+AI D + +E
Sbjct: 221 PYLNKIIEETKDLAETGTIIHICGRLQSVYGEI-NLLKSDAISFDSITDVGQVVENVSGK 279
Query: 284 PVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN+ L + + A + G I + GI + +N+ +V +
Sbjct: 280 AIMGNVSTFTLENGTPESIERMSRACIK-YGVD--ILSPACGIGVRTKLENIQAMVNVCK 336
Query: 343 SEK 345
+ K
Sbjct: 337 NSK 339
>gi|288932105|ref|YP_003436165.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
gi|288894353|gb|ADC65890.1| methyltransferase MtaA/CmuA family [Ferroglobus placidus DSM 10642]
Length = 341
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/319 (18%), Positives = 122/319 (38%), Gaps = 26/319 (8%)
Query: 38 IRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-- 95
++K F ++ E Y F+ A+ D+ V A+ LG + F ++G
Sbjct: 33 LKKYDYAFYEIHLDAEKMANAACSSYELYGFECAVAPFDLGVEAEVLGAEMNFYTHKGKE 92
Query: 96 ----PRMDPITTQEIYLLN-PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTV 150
P + E LN P + + +++ I++K++ + + + P+T+
Sbjct: 93 DIVYPTVKKKAINEPEDLNVPEKIEEKGRVPLVLKALEIMQKRVGEEVPIATYILGPYTL 152
Query: 151 ASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
A ++ D + +++N N LL L+D AE AG+D + + + A
Sbjct: 153 AGQIM------DLEKLLKMSFKNPDRINELLSQLTDFLAELGRIYQDAGIDYLTVREMGA 206
Query: 211 --GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD 268
L F+N + + ++ + G M+ + + AI ++
Sbjct: 207 PTDVLSPRMFKNLILPHLKELFLKLKE-----PTVLHICGDTNMIVELMWQSGATAISVE 261
Query: 269 WSVPLSFALELQKEGPVQ-GNLDPM--RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI 325
++ E E + GN+DP ++ + + + V + S + G I
Sbjct: 262 QKNDVAKTREKLGEEAIIFGNIDPYGTLVLGTPEDIRNAVKKAIVGGVSSVW---PGCDI 318
Query: 326 TPQVDPKNVLDLVKTVRSE 344
P V +N+L V+ V+
Sbjct: 319 WPAVSKENMLTFVEAVKEF 337
>gi|260655894|ref|ZP_05861363.1| uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33 E1]
gi|260629510|gb|EEX47704.1| uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33 E1]
Length = 371
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/357 (15%), Positives = 132/357 (36%), Gaps = 31/357 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +++ +G ++ P L AG + K F P+ VE
Sbjct: 20 MTPK-ERMTAFAKGEPMDRLPCVL--NAGVTMSSIIGATCKQYVF-----DPDVMVETET 71
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMD-PITTQEIYLLNPNID 114
RY D+ + + +A+A+G + + E+ E P ++ P + +++ + D
Sbjct: 72 AMFNRYRHDSVGISITLRGMAEAMGSVMNYPEDNISLLEKPVVEKPEDVDNLTIVDAHKD 131
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ LR ++ + P++VA+ ++ + +
Sbjct: 132 ---GKLPLVLDALQRLRDRIGKEGNVGAGMAGPFSVAASVVGT------ENLLRWMVKKP 182
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA 232
+ ++D ++ + +Y+ A G + D + L +F+ ++ + R I+
Sbjct: 183 EVVHKVMDMVTLCNEQYIKAVGELGFKGVSFSDPVSSTSLLKVKQFKEFSLPYLTRNIAH 242
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP 291
V++ + + G L LD L+ A E+ K+ + GN+ P
Sbjct: 243 VKQYCGSKPMVHIC-GTSKALWRDCVEAGIGTFSLDNIEDLAEAKEIMGKDVVITGNVPP 301
Query: 292 --MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ L +++ V + + P +I + G I +N+ ++ R
Sbjct: 302 VDVMLYGDREMIRKSVRECIRKAWNSPKGYILSTGCQIPKGTSLENLEYFMEAGREY 358
>gi|170760019|ref|YP_001786912.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|169407008|gb|ACA55419.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 350
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIKLTRDALMDEVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALRKNINKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDVVYRGKKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|222055632|ref|YP_002537994.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
gi|221564921|gb|ACM20893.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
Length = 343
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 109/302 (36%), Gaps = 23/302 (7%)
Query: 54 YTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-----GPRMDPITTQEIYL 108
+ + + + +D +F+D+ A+A+G V + E+E P ++ +
Sbjct: 46 LIAQAQIAAYQLFGYDIIRIFTDLYTQAEAMGAKVHYPEDETAYLEAPAIN--DLAHLDR 103
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
L P L ++I I +L + + G P+T AS+++ +
Sbjct: 104 LQPADPYRDGNLPHHLEAIGIAVDRLGTEVAVTGAITCPFTNASFLVGAETLA------R 157
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSV 226
+ + L + + Y A I AG + D + + + +F ++ +
Sbjct: 158 LMLKEPDKVHRLCEVSLETCLRYAAAIIDAGA-TPSLTDAMSSSTVISPRQFREFSLPYL 216
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPV 285
R++ + K A + ++ ++ + +D L+ A + + +
Sbjct: 217 KRLMDFIHGKGKGATL-HICGKTAKIWESMVE-AGADCLSIDNDASLTEAKLAVGERVRL 274
Query: 286 QGNLDPM--RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
GN+ P L + + + P I G + + +N+ +++TV
Sbjct: 275 MGNIHPSAVMLQGTPADVRRATLSCIREAHDNPKGLIVASGCSLPTETPFQNIAAMMETV 334
Query: 342 RS 343
R+
Sbjct: 335 RA 336
>gi|20093343|ref|NP_619418.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19918706|gb|AAM07898.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 368
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 63/352 (17%), Positives = 119/352 (33%), Gaps = 31/352 (8%)
Query: 1 MNERK--QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFL-DMCYTPEYTVE 57
M++ + L VL+G + P+ + Q G + +K F + PE
Sbjct: 1 MSDYNLRDRFLSVLKGKAADRVPVLSVTQTGTV-----SLMEKCGVFWPEAHSNPEKMAA 55
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-GP--RMDPITTQEIYLLNPNID 114
L+L +A + V+++A+G V E P ++ P+ P+
Sbjct: 56 LSLAAHEITKLEAVRYPYCVTVLSEAMGCEVSRGTKEIQPYVKVPPLGKSGNLPEIPDSL 115
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + + + ++ S+L+ K + LI +P + S ++ ++
Sbjct: 116 LEMGRIPTVLKATSLLKDKTEESLPLIVGIESPAALCSRLLGANNYLGQLL------RSP 169
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISA 232
L+ ++ EY A G D + + D +G L F+ + R
Sbjct: 170 DYIRECLEINTEACIEYANALFEEGADAVCVPDGISGPDLLSLDIFDRLIKPAYRRFCKK 229
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALE-LQKEGPVQGNLD 290
R K + A L+ I ++ V L A + L K + GN+
Sbjct: 230 AR----GMKILHMCGNAFPFLETLSE-CGFEGISVEEKVWDLKGAKKSLGKGICLIGNVA 284
Query: 291 --PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L + + L+ I GI P +N+ LV+
Sbjct: 285 SSSTLLFGSPEDVKAEARKSLEGGVD---ILAPSCGIAPLTPLENMKALVEA 333
>gi|322805806|emb|CBZ03371.1| methylcobalamin:coenzyme M methyltransferase,methanol-specific
[Clostridium botulinum H04402 065]
Length = 350
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIKLTRDVLIDEVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALRKNINKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDVVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|20093142|ref|NP_619217.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
gi|19918482|gb|AAM07697.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 370
Score = 119 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 67/381 (17%), Positives = 129/381 (33%), Gaps = 55/381 (14%)
Query: 1 MNERKQKILEVLQGNVINPPP---IWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTV 56
M R ++ + L+G ++ P +W AG ++ ++ + D + E
Sbjct: 5 MTSR-ERFINALEGKGVDRVPYGYLWF--GAG------HEVLERMGTSLRDAYGSAEGIA 55
Query: 57 ELTLQPIRRYNFDAAILF-SDILVIADALGRNVRFVENEGPRMDP---ITTQEIYLLNPN 112
+ + Y+ D + +LV A+ALG V EN P ++ + E L+NP+
Sbjct: 56 KAQILAREMYHHDNVMSPWGCLLVEAEALGTKVTIKENAYPAVEKYALKSAAEHELINPD 115
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ I S+ IL K++ + +IG +P +AS ++ G +
Sbjct: 116 NIERSGRVKTIAGSVEILLKEIGDEALIIGATMSPLMLASQVMGGS-----RLCIDML-K 169
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF--DTHAGCLGEHEFENYAARSVGRII 230
+ +F+ LL+ L++ + + AG D I + ++ E + +
Sbjct: 170 DRDSFHSLLEKLTESCILFADTLLEAGADGIFVENGESTGDLFSPQMAEEFMLPYTKELY 229
Query: 231 SAVRRKYPNAKFISFAKGAGYMLK--------------------------NYRRLTDSNA 264
++ + IS A ++L + N
Sbjct: 230 DHIKAE--GGYVISHNCAAHAFYDLEMKLEPHALNFSFGDVRLLGKKYGVECKKLHNHNN 287
Query: 265 IGLDWSVPLSFALELQKEG-PVQGNLDPMR-LVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
IG E G + GN+ P L + V + L FI G
Sbjct: 288 IGCGPRHCFKEFKEFSDAGICLMGNIIPDAPLTGSRAEIEHEVKSCLSAAPEKGFILATG 347
Query: 323 HGITPQVDPKNVLDLVKTVRS 343
I + + L V++
Sbjct: 348 CEIPLNTPLEKMEMLWDAVKA 368
>gi|32479636|emb|CAE02689.1| putative metyhltransferase [Methanococcus voltae]
gi|33943592|gb|AAQ55471.1| hypothetical protein [Methanococcus voltae PS]
Length = 362
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 123/310 (39%), Gaps = 24/310 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPI 101
+ + + ++ + + D +F+D+ +IA+A+G V E+ E P +D I
Sbjct: 44 EFNSNSDALADAVIKSYKMFGMDGTRVFTDLFLIAEAMGAKVNKPEDNTADLEEPAIDDI 103
Query: 102 TTQEIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ + + ID + + +PI +++ ++ ++ + +++ P+T A ++I
Sbjct: 104 SKIDDLKV---IDPYKDGRIPIHLRAMKKVKDEIGDEVSVTASVVGPFTNAFFLIG---- 156
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEF 218
+ ++ + + L + + A + GV + I + + + F
Sbjct: 157 --IEKMTKMLLKDPESVHKLCEISLKSCMKLTDAALEQGV-GVTISEPLSSCTVISPKHF 213
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-AL 277
NY+A + R+I ++ K + + + + N + +D L A
Sbjct: 214 RNYSAPYLKRLIDYMKSKGVGNIVLHICGKTDPIWDDLVDM-GVNVLSIDDIADLKLCAD 272
Query: 278 ELQKEGPVQGNLDPM-RLVVG-NQVMIDGVNAILDV--LGSGPFIFNLGHGITPQVDPKN 333
+ + V GN+DP + G + + + + FI G + +V +N
Sbjct: 273 RVGDKMAVAGNVDPSAIMYAGTKEQVRKATLKSIKEGYMAKKGFIIMSGCSLPVEVPIEN 332
Query: 334 VLDLVKTVRS 343
+ ++ TVR
Sbjct: 333 IQTMMDTVRE 342
>gi|134045876|ref|YP_001097362.1| methylcobalamin:coenzyme M methyltransferase [Methanococcus
maripaludis C5]
gi|132663501|gb|ABO35147.1| methyltransferase MtaA/CmuA family [Methanococcus maripaludis C5]
Length = 342
Score = 119 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 70/362 (19%), Positives = 133/362 (36%), Gaps = 40/362 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ + L G I+ P +M G Y PE
Sbjct: 1 MITPKERLSKALNGEEIDRVPCICPGGMMNMITKDIMDITGVYWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
E +LT+ F+ + + V A+++G V+ + PR+ PI +
Sbjct: 49 -TDAEKMAKLTVGMYENGGFENYGVPFCMTVEAESMGAGVKMGTDITEPRVTNYPIGSVT 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y +I++ + +SI IL+ K + +I P + AS ++ + + +
Sbjct: 108 EYGKLNHINIDEGRGKTVLESIDILKDK-HTEVPIIANITGPVSTASSLME--PVTYYKE 164
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
R + +DF+++ E+ AQ+ +G DV+ I D LG F+ +A
Sbjct: 165 LR----RKPEVAKEFMDFVTENLIEFGKAQLKSGADVLAISDPSGTGEILGPKMFKEFAI 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ +II + I + + L S+AI D + +E
Sbjct: 221 PYLNKIIEETKDLAETGTIIHICGRLKSVFEEINSL-KSDAISFDSITDVGQVVENVSRK 279
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+ GN+ L G I+ ++ G I + GI + +N+ +V ++
Sbjct: 280 AIMGNVSTFTLENGTPKSIERMSRACIKYGVD--ILSPACGIGVRTKLENIQAMVNVCKN 337
Query: 344 EK 345
K
Sbjct: 338 SK 339
>gi|187779854|ref|ZP_02996327.1| hypothetical protein CLOSPO_03450 [Clostridium sporogenes ATCC
15579]
gi|187773479|gb|EDU37281.1| hypothetical protein CLOSPO_03450 [Clostridium sporogenes ATCC
15579]
Length = 340
Score = 118 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 132/367 (35%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ VL+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLVLKNKEVDRPPCICPGGMMNMIIEDLMDISGFKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
P+ L + + F+ + + + A+A+G V + PR+ PI + E
Sbjct: 49 -VNPQIMANLAISMYEQEGFENFGVPFCMTIEAEAMGATVDLGDKTTEPRVIKYPIESVE 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ ++L + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 QWRQLKKVNLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHKFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPRLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RI+ ++ I + K L S+ + D ++ L+ +
Sbjct: 220 IPYLNRIVDELKDYTDGT-IIHICGRLKSIYKELNDL-HSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTI---QNSTKEEVEKLANAC------MNLGVDILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVDAAK 335
>gi|153938130|ref|YP_001390842.1| methylcobalamin:coenzyme M methyltransferase [Clostridium botulinum
F str. Langeland]
gi|152934026|gb|ABS39524.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
gi|295318912|gb|ADF99289.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. 230613]
Length = 340
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/367 (17%), Positives = 133/367 (36%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLSLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -TNPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ +II ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINKIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + ++ + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSSE---EDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVNAAK 335
>gi|168182424|ref|ZP_02617088.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
gi|182674304|gb|EDT86265.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
Length = 340
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 132/367 (35%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -VNPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHKFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPRLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLAIQNSS---KEDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVNAAK 335
>gi|325663327|ref|ZP_08151777.1| hypothetical protein HMPREF0490_02518 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086889|ref|ZP_08335966.1| hypothetical protein HMPREF0987_02269 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325470781|gb|EGC74011.1| hypothetical protein HMPREF0490_02518 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330410055|gb|EGG89490.1| hypothetical protein HMPREF0987_02269 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 358
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/363 (18%), Positives = 131/363 (36%), Gaps = 49/363 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM G PE
Sbjct: 1 MFTEKERLERALRQEEVDRPPCICPGGMMNMITTDLMDACGVTWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL 108
+ +L L + F+ + + + A+ LG V +P T+
Sbjct: 49 -TDAQMMADLALASYQHGCFENVGVPFCMTIEAEELGAKVTLGSK---IFEPHVTEYAGT 104
Query: 109 LNPNID------LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIK 161
+ L + +I IL++K + +IG P +VAS +I GF K
Sbjct: 105 SVTEWEKSSPINLECGRAKVVLDAIRILKEK-NLDVPIIGNLVGPVSVASSVIDPVGFYK 163
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFE 219
D +++ + + F+++ + A I G DVI I D LG FE
Sbjct: 164 DLRRHK-------EEAHQFMTFVTEQLIAFANAMIENGADVIAISDPSGTGEILGPKFFE 216
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
YA + + ++ ++ + + + + S+A+ D VPL A +
Sbjct: 217 EYAVKYLNMLLDGIKDQEKGT-IVHICGQMRSVYEQI-DKVHSDALSFDAIVPLKEARKN 274
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
++ + GN+ L G++ + + GS I + G+ + N+ ++K
Sbjct: 275 LQDRVLMGNVSTFALEFGDEERVQKLTKFCVQSGSD--IISPACGLGTKSPLANIQAILK 332
Query: 340 TVR 342
T++
Sbjct: 333 TLK 335
>gi|83590928|ref|YP_430937.1| methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
gi|83573842|gb|ABC20394.1| Methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
Length = 338
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 63/365 (17%), Positives = 120/365 (32%), Gaps = 55/365 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M + ++ L L ++ P+ M G Y P D+
Sbjct: 4 MTPK-ERFLRALNREHVDRIPVGNPVSVATVESMEACGAYFP-------------DVHLN 49
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF--VENEGPRMDPITTQEIYLL 109
PE L FD + + A A G + + V++ ++ ++
Sbjct: 50 PEKMATLAATGYEILGFDTIAPYFSVQQEAAAFGLKMNWGTVDSMPDVLENPFEDPDDII 109
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P L + + +++ IL+K+ +H+ L+G PWT++ ++ ++ +
Sbjct: 110 IPADFLERPPIRTVLEALKILKKEYGDHVCLVGKVMGPWTLSYHL---HGVQKFLIKTIL 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL-GEHEFENYAARSVGR 228
LD L D++ ++ AQ AG DV+ + D G L + ++
Sbjct: 167 ---EPDKVRRFLDKLKDLAVKFANAQFAAGADVVTVADHATGDLVSGTCYRDFLLPIHQE 223
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQG 287
+ + N I G +Y N D V A E + + G
Sbjct: 224 MTRQL-----NGPTILHICGNTTDRLDYIAQAGFNCFHFDSKVNPRQAHEIVNGRIALTG 278
Query: 288 NL-DPMRLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQ------VDPKNVLDLVK 339
++ +P L G + V A + I I+P+ N+ +V
Sbjct: 279 SINNPKTLFNGTPDDVRREVFANCEAGIE---I------ISPECAVPLRTPNANLKAIVT 329
Query: 340 TVRSE 344
V
Sbjct: 330 AVEEY 334
>gi|296187952|ref|ZP_06856344.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|296047078|gb|EFG86520.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 343
Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/356 (19%), Positives = 132/356 (37%), Gaps = 39/356 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M K+++ + G ++ PP +M L E QI+ F + +
Sbjct: 1 MLSPKERLNKAFNGEKVDRPPCICPGGMMNMVTTELIEEAQIK-----FPEAHTNAKMMA 55
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP------ITTQEIYLLN 110
L R F+ + + + A+ G V +P I + + +
Sbjct: 56 GLAEAVYERGCFENYGVPFCMTIEAENFGAKVDMGTK---IYEPHVVEYAIDSVKEWKKI 112
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHGQNRVF 169
I+ + +I +L+ K + +IG P + AS M F K+ ++
Sbjct: 113 SQINFTEGRAKVVIDAIKLLKSK-GTDVPIIGNLTGPISTASSIMEPSTFYKELKKSNK- 170
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVG 227
+ L+F++D + QI AG D+I I D LG FE +A + +
Sbjct: 171 ------EAHEFLNFVTDELITFAKKQIEAGADIIAISDPSGTGEILGPKLFEEFAVKYIN 224
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPV 285
+II +V+++ + G M + Y + SNA+ D V +S A + K+ +
Sbjct: 225 KIIESVQKENK----CTIVHICGQMKRVYSEVNKVKSNALSFDSIVNMSDARKNLKDRVL 280
Query: 286 QGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GN+ + + + + + I + G+ + KNV +++
Sbjct: 281 MGNVSTYAIEFGEANKIAELTEKCVKDGSN---IISPACGLGMKSPLKNVKAMLEY 333
>gi|213584436|ref|ZP_03366262.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 67
Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E E+T
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVT 60
Query: 60 LQPIRRY 66
LQP+RRY
Sbjct: 61 LQPLRRY 67
>gi|297587812|ref|ZP_06946456.1| methylcobalamin:coenzyme M methyltransferase [Finegoldia magna ATCC
53516]
gi|297574501|gb|EFH93221.1| methylcobalamin:coenzyme M methyltransferase [Finegoldia magna ATCC
53516]
Length = 342
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 63/364 (17%), Positives = 129/364 (35%), Gaps = 49/364 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI------------WLMRQAGRYLPEYRQIRKKFKNFLDM 48
M K ++ L I+ P+ LM YLPE +K +
Sbjct: 1 MINEKDRLKNALNHIFIDRIPVICPGGMMNMISKELMELKDIYLPEAHLDSRKMADLAKA 60
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PR-----MDPIT 102
Y + F+ + + + A+ +G V F P D I
Sbjct: 61 IYDEKI-------------FENIGVPFCMTIEAEDMGSVVDFGNEIYEPHVIEYAFDNIK 107
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
E + + + ++I IL+ + + +IG P + AS ++ +K
Sbjct: 108 DWE---KIKDFKKEDSRSDIVIEAIKILKDE-EKNAPIIGNITGPVSTASSIM--DSVKY 161
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFEN 220
+ R + + + +D+++D E+ QI AG DVI + D +G F+
Sbjct: 162 YKALRK----DPQRVHEFMDYVTDHLIEFANRQIDAGADVIAVSDPSGTGEIMGPKFFKE 217
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
+ + + + + ++ + I G + + S+ + D V L A ++
Sbjct: 218 FTVQYLNKFLDGIK----DVPKIVHICGRMTPVLDLCNDIHSDCLSFDSIVSLKDAKKVL 273
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
K + GN+ L + I + I + +G I + GI + +N+ ++
Sbjct: 274 KHHVLMGNVSTYALEYSDSEKIQKLAKI--SVNNGSNILSPACGIGMRSPLENLKSIITA 331
Query: 341 VRSE 344
++
Sbjct: 332 SKNY 335
>gi|170756312|ref|YP_001781132.1| methylcobalamin:coenzyme M methyltransferase [Clostridium botulinum
B1 str. Okra]
gi|169121524|gb|ACA45360.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum B1 str.
Okra]
Length = 340
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 133/367 (36%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLSLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -INPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + ++ + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSSE---EDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 SMVNAAK 335
>gi|134045877|ref|YP_001097363.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C5]
gi|132663502|gb|ABO35148.1| Uroporphyrinogen decarboxylase [Methanococcus maripaludis C5]
Length = 363
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/307 (13%), Positives = 118/307 (38%), Gaps = 27/307 (8%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
PE + ++ RR+ D A +F+D+ +I++A+G + + E P ++ ++ +
Sbjct: 49 DPEALADAIIKTYRRFGSDGARVFTDLFLISEAMGAKINMPYDNTADLEEPAINNMSEFD 108
Query: 106 IYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+ ID + + +P+ +++ I+R ++ + + + P+T A ++I
Sbjct: 109 KLKV---IDPYTDGRIPVHLRALEIVRDEIASDVGVTASVVGPFTNAFFLIG------VE 159
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYA 222
+ ++ + + L + A + G + + + + + F ++
Sbjct: 160 KMTKMLLKDPDSVHKLCEISLQSCIALTDAVLEKGT-GVTVSEPLSSCTVVSPKHFREFS 218
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQK 281
A + R+I ++ + I + ++ + + + +D L E +
Sbjct: 219 APYLKRLIDYIKART-GKLVIHICGKTDPIWEDLVDM-GVDVLSIDDIADLENCAETVGD 276
Query: 282 EGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL--GSGPF-IFNLGHGITPQVDPKNVLD 336
+ GN+DP ++ + + + + I + G + V +N+
Sbjct: 277 RMVIAGNVDPSGVLYAGSREDVRKATLKCIKQGINAKKGYMIMS-GCSLPVDVPVENIDA 335
Query: 337 LVKTVRS 343
++ R
Sbjct: 336 MMDAARE 342
>gi|150402003|ref|YP_001329297.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C7]
gi|150033033|gb|ABR65146.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C7]
Length = 363
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 41/306 (13%), Positives = 111/306 (36%), Gaps = 25/306 (8%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
PE + ++ RR+ D A +F+D+ +I++A+G + + E P ++ E
Sbjct: 49 DPEALADAIIKTYRRFGSDGARVFTDLFLISEAMGAKINMPYDNTADLEEPAIN--DMSE 106
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
L + +++ I+R ++ + + + P+T A ++I +
Sbjct: 107 FDKLKVVNPYTDGRIPVHLRALEIVRDEIASEVGVTASVVGPFTNAFFLIG------VEK 160
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAA 223
++ + + L + A + G + + + + + F ++A
Sbjct: 161 MTKMLLKDPESVHKLCEISLQSCIALTDAVLEKGT-GVTVSEPLSSCTVVSPKHFREFSA 219
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
+ R+I ++ + I + ++ + + + +D L E +
Sbjct: 220 PYLKRLIDHIKART-GKLVIHICGKTDPIWEDLVDM-GVDVLSIDDIADLENCAETVGDR 277
Query: 283 GPVQGNLDPMRLVV--GNQVMIDGVNAILDVL--GSGPF-IFNLGHGITPQVDPKNVLDL 337
+ GN+DP ++ + + + + I + G + +V +N+ +
Sbjct: 278 MVIAGNVDPSGVLYAGSREDVRKATLKCIKQGIKAKKGYMIMS-GCSLPVEVPVENIDAM 336
Query: 338 VKTVRS 343
+ R
Sbjct: 337 MDAARE 342
>gi|159906206|ref|YP_001549868.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C6]
gi|159887699|gb|ABX02636.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C6]
Length = 363
Score = 116 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 43/307 (14%), Positives = 117/307 (38%), Gaps = 27/307 (8%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
PE + ++ +R+ D A +F+D+ +I++A+G + + E P ++ E
Sbjct: 49 DPEALADAIIKTYKRFGSDGARVFTDLFLISEAMGAKINMPYDNTADLEEPAIN--DMSE 106
Query: 106 IYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
L ID + + +P+ +++ I+R ++ + + + P+T A ++I
Sbjct: 107 FDKLK-VIDPYKDGRIPVHLRALEIVRDEIASEVGVTASVVGPFTNAFFLIG------VE 159
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYA 222
+ ++ + + L + A + G + + + + + F ++
Sbjct: 160 KMTKMLLKDPESVHKLCEISLQSCIALTDAVLEKGT-GVTVSEPLSSCTVVSPKHFREFS 218
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQK 281
A + R+I ++ + I + ++ + + + +D L E +
Sbjct: 219 APYLKRLIDHIKART-GKLVIHICGKTDPIWEDLVDM-GVDVLSIDDIADLENCAETVGD 276
Query: 282 EGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL--GSGPF-IFNLGHGITPQVDPKNVLD 336
+ GN+DP ++ + + + + I + G + +V +N+
Sbjct: 277 RMVIAGNVDPSGVLYAGSREDVRKATLKCIKQGIKAKKGYMIMS-GCSLPVEVPVENIDA 335
Query: 337 LVKTVRS 343
++ R
Sbjct: 336 MMDAARE 342
>gi|309378190|emb|CBX23182.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 102
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLVVGNQVMIDGVNAILD 310
LK+ + ++A+GLDW+ + A + +QGN DP L + + L
Sbjct: 2 WLKSMAEI-GADALGLDWTCNIGEARRRVGDQVALQGNFDPSALFGTPESIRTEAARFLA 60
Query: 311 VLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G G +FNLGHGI DP++ LV TV
Sbjct: 61 DYGQGSGHVFNLGHGINQHADPEHAKILVDTVHELS 96
>gi|300855092|ref|YP_003780076.1| uroporphyrinogen decarboxylase-like protein [Clostridium
ljungdahlii DSM 13528]
gi|300435207|gb|ADK14974.1| uroporphyrinogen decarboxylase related protein [Clostridium
ljungdahlii DSM 13528]
Length = 343
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 70/360 (19%), Positives = 137/360 (38%), Gaps = 39/360 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M K+++ +V G ++ PP +M L E + F + + +
Sbjct: 1 MLSPKERLDKVFSGEKVDRPPCICPGGMMNMVTTELIE-----EVGIKFPEAHMSAQMMA 55
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP------ITTQEIYLLN 110
L+ R F+ + + + A+ G V +P I + + +
Sbjct: 56 GLSEAVYERGCFENYGVPFCMTIEAENFGAKVDMGTK---IYEPHVVEYSIDSVKEWKKI 112
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW-TVASYMISGGFIKDHGQNRVF 169
I+ + +I +L+ K N + +IG P T +S M F K+ ++
Sbjct: 113 SQINCTEGRAKVVIDAIKLLKSK-RNDVPIIGNLTGPISTTSSIMEPSTFYKELKKSNK- 170
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVG 227
+ L+F++D ++ Q+ AG D+I I D LG FE +A + +
Sbjct: 171 ------EAHEFLNFVTDELIKFAKKQMEAGADIIAISDPSGTGEILGPKLFEEFAVKYIN 224
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPV 285
+II +V+++ G M K Y + SNA+ D V +S A + K+ +
Sbjct: 225 KIIESVKKENKGTIV----HICGQMKKVYLEVNKVKSNALSFDSIVNMSDARKNLKDRVL 280
Query: 286 QGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
GN+ + + + + + + I + G+ + KNV ++K + E
Sbjct: 281 MGNVSTYAIEFGEAKKIAELTEKCVKDGSN---IISPACGLGMKSPLKNVKAMLKYLSKE 337
>gi|21228529|ref|NP_634451.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20907017|gb|AAM32123.1| Methylthiol:coenzyme M methyltransferase [Methanosarcina mazei Go1]
Length = 367
Score = 115 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/332 (16%), Positives = 114/332 (34%), Gaps = 27/332 (8%)
Query: 29 GR--YLPEYRQIRKKFKNFLDMC--------YTPEYTVELTLQPIRRYNFDAAILFSDIL 78
GR Y+P + + + +C + + +L +AA DI
Sbjct: 18 GRVDYVPPANPLAQTTTELMAICNASWPKAHFDSKMMADLAAASYEVCGIEAARPQFDIS 77
Query: 79 VIADALGRNVRF-VENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ A+ LG + + + P P T + P+ + + +I LRK+
Sbjct: 78 LEAEVLGCKLDWDKPDRPPVTGPAYTNPEDVTWPDKLEETGRIPVVLGAIDELRKRYDGM 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ +I AP+TVA ++ + + + +D +D Y Q
Sbjct: 138 LPIIPLLTAPFTVAGHIAG------VENMARWTKTDPEKAHAFIDAATDFVVAYGKLQAA 191
Query: 198 AGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
G ++ + D A + + + + R+ + I G L
Sbjct: 192 YGAHILFLADPSASSSLISAETYREFVLPAHRRLAKEISC-----PQILHICGDSSKLLP 246
Query: 256 YRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS 314
Y + + + D +VP+ + ++ + + G+LD + L+ N N + +
Sbjct: 247 YIKQSGIDCFSFD-TVPVWYCRQVIGNDMSILGSLDVIDLM-PNGTPEQVYNRTRECILQ 304
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
G I G++ +N+ V+ + I
Sbjct: 305 GTDIVGTACGVSYGTPLENLRAYVRACKETPI 336
>gi|300856196|ref|YP_003781180.1| uroporphyrinogen decarboxylase-like protein [Clostridium
ljungdahlii DSM 13528]
gi|300436311|gb|ADK16078.1| uroporphyrinogen decarboxylase related protein [Clostridium
ljungdahlii DSM 13528]
Length = 351
Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 122/309 (39%), Gaps = 20/309 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR--MDP-ITT 103
+ ++P+ +L + +R D A + + + +A+A+G + + + G ++P I +
Sbjct: 45 EYYHSPQLMADLEIALFKRLRHDGASISTSLRGVAEAMGAKIGY-PDHGISYLIEPAIKS 103
Query: 104 QEIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
E ID + LP+ ++I + + L + + + P++VA+ ++
Sbjct: 104 VEEIESLKIIDPLKDGNLPVLIEAIKLTKNALMDEVDVGAAMSGPFSVAASVVGT----- 158
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFEN 220
+ + + L+D +++ + Y+ GV I D + + +F
Sbjct: 159 -ENLLKWIIKCPEKVHTLMDIIAECNNRYIDEVSKLGVS-IGFADPVSSTSLISPKQFRE 216
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
++ ++ + I ++ K ++ I + + K+ + +D L A E+
Sbjct: 217 FSLPALKKNIDRIKEKTGSSPAIHICGKSKDIWKDVVN-AGVSNFSIDDYEDLEEAKEIM 275
Query: 281 KEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVL 335
+ V GN+ P+ ++ + + + V + ++ + G I + V
Sbjct: 276 GDRVVITGNVPPVDVMYEGTKEDIFNSVKECIRKGHDSKKGYVLSTGCQIPMNTPIEKVE 335
Query: 336 DLVKTVRSE 344
++ R+
Sbjct: 336 MFMEAGRTY 344
>gi|237794833|ref|YP_002862385.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum Ba4 str.
657]
gi|229263705|gb|ACQ54738.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum Ba4 str.
657]
Length = 340
Score = 115 bits (289), Expect = 9e-24, Method: Composition-based stats.
Identities = 65/367 (17%), Positives = 133/367 (36%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI + +
Sbjct: 49 -VNPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIGSVD 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ I+L + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 QWRQLKRINLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPRLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSS---KEDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVNAAK 335
>gi|226948831|ref|YP_002803922.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum A2 str.
Kyoto]
gi|226842700|gb|ACO85366.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum A2 str.
Kyoto]
Length = 340
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 132/367 (35%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -INPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSS---KEDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 SMVNAAK 335
>gi|255525343|ref|ZP_05392282.1| methyltransferase MtaA/CmuA family [Clostridium carboxidivorans P7]
gi|255510914|gb|EET87215.1| methyltransferase MtaA/CmuA family [Clostridium carboxidivorans P7]
Length = 342
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/356 (18%), Positives = 133/356 (37%), Gaps = 40/356 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ + +++ + G ++ PP +M L E QI+ F + +
Sbjct: 1 MSPK-ERLNKAFNGEKVDRPPCICPGGMMNMVTTELIEEAQIK-----FPEAHTNAKMMA 54
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP------ITTQEIYLLN 110
L R F+ + + + A+ G V +P I + + +
Sbjct: 55 GLAEAVYERGCFENYGVPFCMTIEAENFGAKVDMGTK---IYEPHVVEYAIDSVKEWKKI 111
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHGQNRVF 169
I+ + +I +L+ K + +IG P + AS M F K+ ++
Sbjct: 112 SQINFTEGRAKVVIDAIKLLKSK-GTDVPIIGNLTGPISTASSIMEPSTFYKELKKSNK- 169
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVG 227
+ L+F++D + QI AG D+I I D LG FE +A + +
Sbjct: 170 ------EAHEFLNFVTDELITFAKKQIEAGADIIAISDPSGTGEILGPKLFEEFAVKYIN 223
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPV 285
+II +V+++ + G M + Y + SNA+ D V +S A + K+ +
Sbjct: 224 KIIESVQKENK----CTIVHICGQMKRVYSEVNKVKSNALSFDSIVNMSDARKNLKDRVL 279
Query: 286 QGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
GN+ + + + + + I + G+ + KNV +++
Sbjct: 280 MGNVSTYAIEFGEANKIAELTEKCVKDGSN---IISPACGLGMKSPLKNVKAMLEY 332
>gi|170759460|ref|YP_001786918.1| methylcobalamin:coenzyme M methyltransferase [Clostridium botulinum
A3 str. Loch Maree]
gi|169406449|gb|ACA54860.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum A3 str.
Loch Maree]
Length = 340
Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/367 (17%), Positives = 133/367 (36%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI + +
Sbjct: 49 -VNPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIGSVD 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ I+L + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 QWRQLKRINLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVEN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + + + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSS---KEDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 AMVNAAK 335
>gi|298673990|ref|YP_003725740.1| MtaA/CmuA family methyltransferase [Methanohalobium evestigatum
Z-7303]
gi|298286978|gb|ADI72944.1| methyltransferase MtaA/CmuA family [Methanohalobium evestigatum
Z-7303]
Length = 341
Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/360 (17%), Positives = 129/360 (35%), Gaps = 46/360 (12%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMC 49
M+E K++++ +L+G ++ P+ LM +G PE
Sbjct: 1 MDEITPKERMVRLLKGKTVDKTPVGSFTSMSPVDLMELSGSQRPE-------------AD 47
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDPITTQEIYL 108
E L + + F+ D++ + +A+G + + P + ++E
Sbjct: 48 RDSEKMATLAISASKFAGFETVRYPFDMVTLGEAMGCEIDIGTKKRTPSVTSGLSEEAIR 107
Query: 109 LNPNIDLFLN--YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
+ FL + I + I+++++ + + +I P +AS + D
Sbjct: 108 ELELPEDFLENGRIPTILDASRIIKEEVKDELPVIMGVEGPIDLASNIA------DIKTF 161
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAAR 224
+ ++ LLD +D EY A + G D + I + A L +F+N
Sbjct: 162 MKWLLKDREIVEKLLDVCTDACIEYANACLKHGADTVCIAEAVASPDLLPPSDFDNLLKP 221
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQ--K 281
+I + + + + ++ + N I ++ +V A+E
Sbjct: 222 RYQKIAENL----EGHRVLHVCGKSDKIIPSMVE-CGFNGISIEENVRDFKTAVETAHKN 276
Query: 282 EGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
V GN+ L G ++ D L +G + G GI P+ N+ +V+
Sbjct: 277 NNIVIGNVSTSQTLYNGTP--EQVISESFDCLKNGVDVLAPGCGIAPESPLANLKAMVQA 334
>gi|153855881|ref|ZP_01996856.1| hypothetical protein DORLON_02881 [Dorea longicatena DSM 13814]
gi|149751849|gb|EDM61780.1| hypothetical protein DORLON_02881 [Dorea longicatena DSM 13814]
Length = 343
Score = 114 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 71/370 (19%), Positives = 139/370 (37%), Gaps = 53/370 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
MNE+ +++ + L + PP LM ++G PE
Sbjct: 1 MNEK-ERLKKALHHEKTDRPPCICPGGMMNMITTDLMDKSGITWPEAH------------ 47
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDPI---TTQ 104
E +L F+ + + + A+++G V + P + + +
Sbjct: 48 -LNAEMMADLAQANYENGCFENVGVPFCMTIEAESMGAKVTLGDRVHEPHVTEYALHSVK 106
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDH 163
E + P +D+ + + +I IL+ + + +IG P + AS ++ F K+
Sbjct: 107 EWEKIRP-MDMNYGRVKVVLDAIRILKSR-NLDVPIIGNITGPVSTASSVMEPVIFYKEL 164
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENY 221
+ + + ++ ++D + AQI AG D+I I D LG FE Y
Sbjct: 165 RKKK-------EDAHKYMELVADEIIRFARAQIDAGADIIAISDPSGTGEILGPKLFEEY 217
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR--RLTDSNAIGLDWSVPLSFALEL 279
A + RII ++ + K G M Y + S+ + D V +S A +
Sbjct: 218 AVHYINRIIDHLQAE----KMGVIVHICGQMRNVYAQVEMIHSDVLSFDSCVAMSDAKKH 273
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQVDPKNVLD 336
K+ + GN+ L GN ++ + + G I + G+ +P + + +
Sbjct: 274 LKKHVLMGNVSTWTLEFGNPEKVEQLA--VKCWRDGSGIISPACGLGTKSPLTNIQAIRL 331
Query: 337 LVKTVRSEKI 346
++ EK+
Sbjct: 332 GIRKATEEKV 341
>gi|261250803|ref|ZP_05943377.1| CmuA [Vibrio orientalis CIP 102891]
gi|260937676|gb|EEX93664.1| CmuA [Vibrio orientalis CIP 102891]
Length = 580
Score = 114 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/330 (16%), Positives = 119/330 (36%), Gaps = 28/330 (8%)
Query: 24 LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADA 83
+M +A R LP + D E + + ++ DA I +D+ + A+
Sbjct: 1 MMTRAIRNLP-------GNVSAKDCQVNAELMAQAKMTTSAKFGGDAIIAGTDLFLPAEN 53
Query: 84 LGRNVRFVENEGPRM--DPITTQEIYLLNPNI----DLFLNYLLPIFQSISILRKKLPNH 137
LG + +++ P + P T+ + L D +L + + I IL +
Sbjct: 54 LGAGMEYLDKAQPTLFRHPCPTKAEFDLMLERSEHFDPTRGRVLTVAEEIKILLQNGFGD 113
Query: 138 ITLIGF-CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI 196
L+ G P T A + Q+ + + +L ++
Sbjct: 114 SHLVLLPIGGPATTAQLITGSARFLT------LMEQDPQFCHQVLRVATNTIKSISTVMA 167
Query: 197 HAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
AG I I D + + L +F ++ + I + + A + ++
Sbjct: 168 EAGAHAINILDPFSSSDILPPEQFREFSKPYIIEIFQHM-QSVGIAPILHICTFTEHIWN 226
Query: 255 NYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPM--RLVVGNQVMIDGV-NAILD 310
+ + T + AI D+ + A + + + + G+++P L + + I+
Sbjct: 227 DMKE-TGAIAINGDFWPGIDRARQIVGDDYCLVGSVNPFTTMLSGTPEQVRKETLKCIVT 285
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+G +I + G + V +N+ L++T
Sbjct: 286 AGLNGSYICSPGCDLDWNVPDENIHALIQT 315
>gi|255523818|ref|ZP_05390783.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|255512521|gb|EET88796.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
Length = 350
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 119/309 (38%), Gaps = 20/309 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR--MDP-ITT 103
+ ++ + +L + +R D A + + + +A+A+G + + + G ++P I +
Sbjct: 44 EYYHSAQLMADLEIALFKRLRHDGASISTSLRGVAEAMGAKIGY-PDHGISYLIEPAIKS 102
Query: 104 QEIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
E ID + LP+ ++I + + L + + + P++VA+ ++
Sbjct: 103 VEEIESLKIIDPLKDGNLPVLIEAIKLTKNALMDEVDVGAAMSGPFSVAASVVGT----- 157
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFEN 220
+ + + L+D +++ + Y+ GV I D + + +F
Sbjct: 158 -ENLLKWIIKCPEKVHTLMDIIAECNNRYIDEVSKLGVS-IGFADPVSSTSLISPKQFRE 215
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
++ S+ + I ++ K ++ I + + ++ + +D L A ++
Sbjct: 216 FSLPSLKKNIDRIKEKTGSSPAIHICGKSKGIWEDVVN-AGISNFSIDNYEDLEEAKKIM 274
Query: 281 KEGPVQ-GNLDP-MRLV-VGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVL 335
+ V GN+ P + + + + V + +I + G I + V
Sbjct: 275 GDRVVITGNVPPVEVMYEGTKEDIFNSVKECIRKGHDSKKGYILSTGCQIPMNTPIEKVE 334
Query: 336 DLVKTVRSE 344
++ ++
Sbjct: 335 MFMEAGKTY 343
>gi|167759801|ref|ZP_02431928.1| hypothetical protein CLOSCI_02164 [Clostridium scindens ATCC 35704]
gi|167662420|gb|EDS06550.1| hypothetical protein CLOSCI_02164 [Clostridium scindens ATCC 35704]
Length = 338
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/363 (19%), Positives = 130/363 (35%), Gaps = 47/363 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ V++GN ++ PP LM Y+PE
Sbjct: 1 MLTPKERLYNVMKGNAVDRPPCICPGGMMNMVTTDLMDAVDIYMPE-------------T 47
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDP--ITTQE 105
L F+ + + V A+ +G V P + I + E
Sbjct: 48 HTDARMMAGLAKAVYDSGCFENYGVPFCMTVEAEEMGAKVEMGSRVYEPHVSAYAIESVE 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y P ID + +I ILR++ + +IG P + AS ++
Sbjct: 108 DYGKLPRIDTGKGRAKVVLDAIRILREETDG-VPIIGNLTGPISTASSVMEPVVF----- 161
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
+ +N +A + +DF++ + AQI AG DVI I D LG FE +A
Sbjct: 162 YKELRKKNKQA-HAYMDFITRQLISFGRAQIEAGADVIAISDPSGTGEILGPKYFEEFAV 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR--LTDSNAIGLDWSVPLSFALELQK 281
+ +++ ++ + K + G M Y+ + S+ + D VP+ A K
Sbjct: 221 TYLNQLLDGLQEE----KMGTIVHICGQMSPVYKEVNMVRSSVLSFDSVVPMKEARANLK 276
Query: 282 EGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + GN+ L + + + I + G+ + NV ++K
Sbjct: 277 DRVLMGNVSTFALEFGEQEKVRTLAKGCVRSGSD---IISPACGLGMKSPLANVQAILKC 333
Query: 341 VRS 343
++
Sbjct: 334 LKE 336
>gi|142136|gb|AAB39039.1| uroporphyrinogen decarboxylase [Synechococcus elongatus PCC 7942]
Length = 79
Score = 113 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+ ++L +G V++ PP+W+MRQAGRY+ YR +R K+ F + TPE +E++LQ
Sbjct: 4 SSSLPRLLRAARGEVLDRPPVWMMRQAGRYMKVYRDLRDKYPGFRERSETPELAIEISLQ 63
Query: 62 PIRRYNFDAAILFSDI 77
P R + D ILFSDI
Sbjct: 64 PFRAFKPDGVILFSDI 79
>gi|265750388|ref|ZP_06086451.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
3_1_33FAA]
gi|263237284|gb|EEZ22734.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
3_1_33FAA]
Length = 336
Score = 113 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 110/282 (39%), Gaps = 13/282 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + NI +P
Sbjct: 56 EKYPTAAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLANEEDIEKLNIPALNKGRVP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K + C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLAAKTITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANSLLK 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + + Y++ + I+ V+ +
Sbjct: 170 KCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCRQYSSVFIKEIVEKVQDDHFTV-I 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G+ K T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGHCTKAMVA-TGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
VM +L+ S P F+ + G P +N+
Sbjct: 288 VMKKATLDLLEATKSYPNFVLSSGCDTPPHTPSENIDAFFAA 329
>gi|168180153|ref|ZP_02614817.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
gi|182669132|gb|EDT81108.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
Length = 340
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 68/368 (18%), Positives = 134/368 (36%), Gaps = 59/368 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
PE L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -INPEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILR-KKLPNHITLIGFCGAPWTVAS-YMISGGFIKDH 163
+ IDL + +I I++ + LP + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDRSLP--VPIMANLTGPISVASSLMEPMYFYKEL 165
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENY 221
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 166 VRKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEF 218
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 219 VIPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQ 276
Query: 282 EGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNV 334
V GN+ + + + + V + + NLG GI + +NV
Sbjct: 277 NKAVMGNVSTLTIQNSS---KEDVEKLANAC------MNLGVNILSPACGIGTKSPMENV 327
Query: 335 LDLVKTVR 342
+V +
Sbjct: 328 RSMVNAAK 335
>gi|148379466|ref|YP_001254007.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|153931060|ref|YP_001383845.1| methylcobalamin:coenzyme M methyltransferase [Clostridium botulinum
A str. ATCC 19397]
gi|153936561|ref|YP_001387395.1| methylcobalamin:coenzyme M methyltransferase [Clostridium botulinum
A str. Hall]
gi|148288950|emb|CAL83037.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|152927104|gb|ABS32604.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum A str.
ATCC 19397]
gi|152932475|gb|ABS37974.1| methyltransferase, MtaA/CmuA family [Clostridium botulinum A str.
Hall]
Length = 340
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/367 (17%), Positives = 132/367 (35%), Gaps = 57/367 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDM 48
M K+++ L+ ++ PP LM +G PE
Sbjct: 1 MLTPKERLNLALKNKEVDRPPCICPGGMMNMIIEDLMDISGYKWPEAH------------ 48
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQE 105
E L + + F+ + + + A+++G V + PR+ PI +
Sbjct: 49 -TDAEIMANLAISMYEQGGFENFGVPFCMTIEAESMGATVDLGDKTTEPRVIKYPIKSVV 107
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS-YMISGGFIKDHG 164
+ IDL + +I I++ + + ++ P +VAS M F K+
Sbjct: 108 EWRQLKRIDLNEGREKVVLDAIKIIKDR-NLPVPIMANLTGPISVASSLMEPMYFYKELV 166
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYA 222
+ + + ++F+++ E+ AQ+ AG +VI I D LG F+ +
Sbjct: 167 RKK-------DEAHEFINFVTENLIEFGKAQLLAGANVITISDPSGTGEILGPKLFKEFV 219
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ RII ++ + + K L +S+ + D ++ L+ +
Sbjct: 220 IPYINRIIDELKDYTDGT-IVHICGRLKSIYKELNDL-NSDVVSFDSISSVTQVLKNVQN 277
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLG-------HGITPQVDPKNVL 335
V GN+ + + ++ + V + + NLG GI + +NV
Sbjct: 278 KAVMGNVSTLTIQNSSE---EDVEKLANAC------MNLGVNILSPACGIGTKSPIENVR 328
Query: 336 DLVKTVR 342
+V +
Sbjct: 329 SMVNAAK 335
>gi|237733454|ref|ZP_04563935.1| methylcobamide:CoM methyltransferase mtbA [Mollicutes bacterium D7]
gi|229383489|gb|EEO33580.1| methylcobamide:CoM methyltransferase mtbA [Coprobacillus sp. D7]
Length = 337
Score = 113 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 110/279 (39%), Gaps = 14/279 (5%)
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIF 124
N A + F D+ V A+ G ++ +NE P I ++ +
Sbjct: 57 NPLAILGFMDLSVEAECFGAEIKVTDNEVPTVVGQLIEDEDDAQALKVPAVGSGRSQLYI 116
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I + ++ + I ++G C P+++A ++ D + + Y+ + +L+
Sbjct: 117 DAIKKTKAEIKD-IPILGGCIGPFSLAGRLM------DVSEAMINCYEEPEMVHIVLEKA 169
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ +Y+ A AG D I + + AG L +++ V +I++AV+ +
Sbjct: 170 TKFLIDYISAYKEAGADGILMAEPLAGVLSPVLATEFSSTYVKKIVTAVQDENFMV-VYH 228
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVM 301
+ + + + A ++ + LEL + V GN+DP+ ++ + +
Sbjct: 229 NCGNNTLKMIDDFKEIKARAYHFGNAINIKKMLELMPKDCLVMGNIDPVEIISNGTPETI 288
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVK 339
+ +L FI + G I P KN+ ++
Sbjct: 289 KEITLNLLKECKDYRNFIISSGCDIPPLAPWKNIKAFME 327
>gi|73671018|ref|YP_307033.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
barkeri str. Fusaro]
gi|72398180|gb|AAZ72453.1| methylthiol:coenzyme M methyltransferase [Methanosarcina barkeri
str. Fusaro]
Length = 367
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 54/335 (16%), Positives = 117/335 (34%), Gaps = 33/335 (9%)
Query: 29 GR--YLPEYRQIRKKFKNFLDMC--------YTPEYTVELTLQPIRRYNFDAAILFSDIL 78
GR Y+P + + + +C + + +L P +AA DI
Sbjct: 18 GRVDYVPPANPLAQTTTELMQICNASWPKAHFDSKMMADLAAAPYEVCGIEAARPQFDIS 77
Query: 79 VIADALGRNVRF-VENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ A+ LG + + + P + P T + P+ + + +I LR +
Sbjct: 78 LEAEVLGCKLDWDKPDRPPVIGPAYTDPSNVTWPDNLEEAGRIPVVLGAIEELRTRYDGM 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ +I +P+T+AS++ + + ++ +D Y Q
Sbjct: 138 LPVIPLLTSPFTIASHIAG------VENMAKWTKTAPEKAHAFIEAATDFVIAYGKLQTI 191
Query: 198 AGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
G ++ + D A + + + + RI + I G L
Sbjct: 192 YGAHIVFLADPSASGDLISAETYREFVLPAHKRIAKEISC-----PQILHICGDTSKLLP 246
Query: 256 YRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV--VGNQVMIDGVNA-ILDV 311
Y + + + D +VP+S+ + + E + G+LD + L+ + + + IL
Sbjct: 247 YIKQSGIDCFSFD-AVPVSYCRQVVGNEMSILGSLDVIDLMPNGTPEQVYNRTRECILQG 305
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
I G++ +N+ V+ + +I
Sbjct: 306 AD----IVGTSCGLSFGTSLENLRAYVRACKETQI 336
>gi|294496127|ref|YP_003542620.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
gi|292667126|gb|ADE36975.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
Length = 289
Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/292 (16%), Positives = 101/292 (34%), Gaps = 22/292 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K+++L L+G ++ P+ + Q G + E ++ + PE EL
Sbjct: 7 KERLLNTLKGKPVDRVPVISITQTG--IIELMD--ATGASWPEAHSDPEKMAELAFAAYD 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVEN-EGPRM--DPITTQEIYLLNPNIDLFLNYLL 121
+A V+A+A+G V P + P + + P + +
Sbjct: 63 LTRLEAVRYPYCSTVLAEAMGCKVNLGSKFIQPHVISHPFSEDTDNIEAPKNLVEKARIP 122
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ ++ +L++K+ ++ +I P T+ S++ ++ N L
Sbjct: 123 AVLKATGLLKEKVGENVPIIAGIEGPLTLFSHLTGVDSY------IKWSTLNPDYATQCL 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVRRKYPN 239
+ + EY I G DVI + + + L FE + R
Sbjct: 177 NIATTACIEYANELIKHGADVICVSEGNVCSDLLNSDMFEFFVKPQYHRFCENTT----G 232
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGPVQGNL 289
K + A ML + I ++ V A++ + + + GN+
Sbjct: 233 IKIVHMCGNANPMLDSLAE-CGFQGISIEEKVKDFQAIKKMVGNKSCLIGNI 283
>gi|45358393|ref|NP_987950.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis S2]
gi|44921151|emb|CAF30386.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 363
Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 114/306 (37%), Gaps = 25/306 (8%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE 105
PE + ++ RR+ D A +F+D+ ++++A+G VR E+ E P ++ E
Sbjct: 49 DPEALADAIIKTYRRFGADGARIFTDLFLVSEAMGAKVRKPEDNTADLEEPAIN--DMSE 106
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
L + ++I I+R ++ + + + P+T A ++I +
Sbjct: 107 FDKLKVIDPYTQGRIPVHLRAIEIVRDEIASEVGVTASVVGPFTNAFFLIG------VEK 160
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAA 223
++ + + L + A + GV + I + + + F ++A
Sbjct: 161 MTKMLLKDPESVHKLCEISLQSCIALTDAVLEKGV-GVTISEPLSSCTVVSPKHFREFSA 219
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
+ R+I ++ + I + + + + + +D + E + +
Sbjct: 220 PYLKRLIDHIKART-GKLVIHICGITDPIWDDLVEM-GVDVLSIDNVADMEKCAETVGDK 277
Query: 283 GPVQGNLDPM-RLVVG-NQVMIDGVNAILDVL--GSGPF-IFNLGHGITPQVDPKNVLDL 337
+ GN+DP + G + + F I + G + +V +N+ +
Sbjct: 278 MVIAGNVDPSAIMYAGSREDVRKATIKCAKQGLKAKKGFMIMS-GCSLPVEVPIENIDAM 336
Query: 338 VKTVRS 343
+ T R
Sbjct: 337 MDTARE 342
>gi|297620100|ref|YP_003708205.1| methyltransferase MtaA/CmuA family [Methanococcus voltae A3]
gi|297379077|gb|ADI37232.1| methyltransferase MtaA/CmuA family [Methanococcus voltae A3]
Length = 356
Score = 112 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 64/312 (20%), Positives = 119/312 (38%), Gaps = 24/312 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-------EGP--- 96
+ P+ +LT + F+ + + V A+A+G V+ E P
Sbjct: 48 EAHKDPQKMADLTYAIYKNGGFENVGVPFCMTVEAEAMGAKVKMGTEITEPRVTEYPINS 107
Query: 97 RMDPITTQEIYLLNPNIDLF--LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
++ EI N D + ++ I SI IL+ K + ++ P +VAS +
Sbjct: 108 VVEYTNLNEILSKNGKNDEYNYVSREDVILDSIKILKNK-DKDVPVVANLTGPVSVASSL 166
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGC 212
+ I + + R + +DF++D ++ AQ+ AG DV+ I D
Sbjct: 167 ME--PITYYKELR----SKPEKVHEYMDFITDNLIKFGKAQLKAGADVLAISDPSGTGEI 220
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
LG F+ YA + R+I + I + + L +S+AI D
Sbjct: 221 LGPRMFKQYATPYLNRLIDETQDYAETGTIIHICGRLKSIYGEIKTL-NSDAISFDSITD 279
Query: 273 LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+ +E + GN+ L G I+ +++ G I + GI + +
Sbjct: 280 VKQVVENVPGKAIMGNVSTFTLENGTPQSIERMSSACIKFGVD--ILSPACGIGVRTKLE 337
Query: 333 NVLDLVKTVRSE 344
N+ +V T ++
Sbjct: 338 NIQAMVNTAKNF 349
>gi|167755119|ref|ZP_02427246.1| hypothetical protein CLORAM_00623 [Clostridium ramosum DSM 1402]
gi|167705169|gb|EDS19748.1| hypothetical protein CLORAM_00623 [Clostridium ramosum DSM 1402]
Length = 344
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 109/279 (39%), Gaps = 14/279 (5%)
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIF 124
N A + F D+ V A+ G ++ +NE P I ++ +
Sbjct: 64 NPLAILGFMDLSVEAECFGAEIKVTDNEVPTVVGQLIEDEDDAQALKVPAVGSGRSQLYI 123
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+I + ++ + I ++G C P+++A ++ D + + Y+ + +L
Sbjct: 124 DAIKKTKAEIKD-IPILGGCIGPFSLAGRLM------DVSEAMINCYEEPEMVHIVLKKA 176
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+ +Y+ A AG D I + + AG L +++ V +I++AV+ +
Sbjct: 177 TKFLIDYISAYKEAGADGILMAEPLAGVLSPVLATEFSSTYVKKIVTAVQDENFMV-VYH 235
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVM 301
+ + + + A ++ + LEL + V GN+DP+ ++ + +
Sbjct: 236 NCGNNTLKMIDDFKEIKARAYHFGNAINIKKMLELMPKDCLVMGNIDPVEIISNGTPETI 295
Query: 302 IDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVK 339
+ +L FI + G I P KN+ ++
Sbjct: 296 KEITLNLLKECKDYRNFIISSGCDIPPLAPWKNIKAFME 334
>gi|21228034|ref|NP_633956.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
gi|20906466|gb|AAM31628.1| Methylcobalamin:coenzyme M methyltransferase [Methanosarcina mazei
Go1]
Length = 341
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/350 (17%), Positives = 118/350 (33%), Gaps = 36/350 (10%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ L+G I+ P+ + Q G E ++ + + Y L L
Sbjct: 7 NTRFKRALKGESIDMVPVCSVTQTGTV--ELMEMTGAY--WPQANYDAAKMAALALGGYE 62
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDL-------- 115
F+ V+A+ LG V EG + P T ++
Sbjct: 63 IAGFENVRCPFCTTVLAETLGCTVD----EGSVDIQPYVTDFPCKKKKDVKDISVPDSLL 118
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ IL++++ + ++ P +AS + ++++ + N
Sbjct: 119 ESRLTSVVLDAVEILKERVGEDVPVVAGVVGPAGLASML---AGMRNYLM---WFVTNPE 172
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
L+ + + EY I G D + + D+ AG + FE + V
Sbjct: 173 VVEELMGTVMEACIEYANGLIERGADAVTLIDSEAGPDIIAPQMFETSVFPLYRKFCKEV 232
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP- 291
+ K + A +L + I ++ V +SFA + + GN+ P
Sbjct: 233 K----GLKILHMCGDATAVLDPLAD-SGFEGISIEEKVEVSFAKRIVGDRIRLIGNVSPS 287
Query: 292 -MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L+ G + +I A L+ I G G+ P N+ L++
Sbjct: 288 DTLLMKGTEEVIIEARACLEDGID---ILAPGCGLAPHTPLGNIKALLRA 334
>gi|237710714|ref|ZP_04541195.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
9_1_42FAA]
gi|237727102|ref|ZP_04557583.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. D4]
gi|229433958|gb|EEO44035.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides dorei
5_1_36/D4]
gi|229455436|gb|EEO61157.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
9_1_42FAA]
Length = 336
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 13/282 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + NI +P
Sbjct: 56 EKYPTAAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLANEEDIEKLNIPALNKGRVP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K + C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLAAKTITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANSLLK 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + + Y++ + I+ V+ +
Sbjct: 170 KCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCRQYSSVFIKEIVEKVQDDHFTV-I 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G+ K T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGHCTKAMVA-TGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
VM +L S P F+ + G P +N+
Sbjct: 288 VMKKATLDLLGATKSYPNFVLSSGCDTPPHTPSENIDAFFAA 329
>gi|255522365|ref|ZP_05389602.1| uroporphyrinogen decarboxylase [Listeria monocytogenes FSL
J1-175]
Length = 85
Score = 111 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + L+ + ++ P+W MRQAGR PEYR++++K+ + ++ + PE +T
Sbjct: 1 MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKY-SLFEITHQPEICAYVT 59
Query: 60 LQPIRRYNFDAAILFSDILVIADALG 85
P+ +Y DAAIL+ DI+ +G
Sbjct: 60 KLPVDQYGVDAAILYKDIMTPLPGMG 85
>gi|4140695|gb|AAD04167.1| uroporphyrinogen decarboxylase [Homo sapiens]
Length = 100
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
WT+ +YM+ GG Q + + YQ +A + LL L+D YL+ Q+ AG +Q+F+
Sbjct: 1 WTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFE 60
Query: 208 THAGCLGEHEFENYAARSVGRIISAVRRKY 237
+HAG LG F +A + + V+ +
Sbjct: 61 SHAGHLGPQLFNKFALPYIRDVAKQVKARL 90
>gi|150005444|ref|YP_001300188.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides vulgatus
ATCC 8482]
gi|294775697|ref|ZP_06741201.1| methyltransferase, MtaA/CmuA family [Bacteroides vulgatus PC510]
gi|149933868|gb|ABR40566.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides vulgatus
ATCC 8482]
gi|294450420|gb|EFG18916.1| methyltransferase, MtaA/CmuA family [Bacteroides vulgatus PC510]
Length = 336
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 13/282 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + I +P
Sbjct: 56 EKYPTAAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K + C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLAAKTITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANSLLK 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + + Y++ + I+ V+ +
Sbjct: 170 KCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTV-I 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G+ K T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGHCTKAMVA-TGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
VM +L+ S P F+ + G P +N+
Sbjct: 288 VMKKATLDLLEATRSYPNFVLSSGCDTPPHTPSENIDAFFAA 329
>gi|254884252|ref|ZP_05256962.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
4_3_47FAA]
gi|319640666|ref|ZP_07995382.1| Methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 3_1_40A]
gi|254837045|gb|EET17354.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp.
4_3_47FAA]
gi|317387729|gb|EFV68592.1| Methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 3_1_40A]
Length = 336
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 13/282 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + I +P
Sbjct: 56 EKYPTAAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLNDEEAIDKLEIPALNKGRVP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K + C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLAAKTITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANSLLK 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + + Y++ + I+ V+ +
Sbjct: 170 KCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCTQYSSVFIKEIVEKVQDDHFTV-I 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G+ K T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGHCTKAMVA-TGAAAYHFGNKIDMVEALKEVPADALAMGNLDPVSLFKAATPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
VM +L+ S P F+ + G P +N+
Sbjct: 288 VMKKATLDLLEATRSYPNFVLSSGCDTPPHTPSENIDAFFAA 329
>gi|20089739|ref|NP_615814.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19914674|gb|AAM04294.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 354
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 64/349 (18%), Positives = 117/349 (33%), Gaps = 31/349 (8%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ + + L L G ++ P+ + Q G E R+ + D + + +L L
Sbjct: 5 DLRDRFLNTLHGKAVDKVPVLAVTQTGTV--ELM--RESGAAWPDAHFDAKKMADLALSA 60
Query: 63 IRRYNFDAAILFSDILVIADALGRNV-----RFVENEGPRMDPITTQEIYLLNPNIDLFL 117
+A + V+++ALG V + G +P + + P+
Sbjct: 61 HTFAGLEAVRYPFCLTVLSEALGCKVNPGRXDIQPSPGS--NPFAKEPEKMELPSDFAQR 118
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ I SILR+K + LI P ++AS ++ + + +
Sbjct: 119 GRIPLIKDVTSILREKAGEEVPLIAGMEGPASLASRLL---GTYNFL---TWMIRRPETL 172
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
+ L + Y AG D + I D AG L E + +
Sbjct: 173 SQCLKVTGATCSAYAEILSEAGADAVCIVDGIAGPDMLDPRHLEALIRPEYESFCKSGK- 231
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEGP-VQGNLDPMR 293
K I + +LK R I ++ V L A +L + GNL
Sbjct: 232 ---GIKLIHVCGNSTPILKTLSR-CGFQGISIEEKVTDLQTAKKLVGSKTKLIGNLSSSG 287
Query: 294 LVVGN--QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+++ + + L+ I G GI P+ KN+ +V+
Sbjct: 288 IMLNGTCEEIKLEAQKCLEDGID---ILAPGCGIAPKTPIKNIRAMVEA 333
>gi|212694944|ref|ZP_03303072.1| hypothetical protein BACDOR_04481 [Bacteroides dorei DSM 17855]
gi|212662504|gb|EEB23078.1| hypothetical protein BACDOR_04481 [Bacteroides dorei DSM 17855]
Length = 336
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 13/282 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + NI +P
Sbjct: 56 EKYPTAAATVIMDLTVEAEAFGAEIVFPENEVPSVVGRLLANEEDIEKLNIPALNKGRVP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K + C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLAAKTITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANSLLK 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + + Y++ + I+ V+ +
Sbjct: 170 KCSDFILRYCMALKATGVNGVVMAEPAAGLLSDEDCRQYSSVFIKEIVEKVQDDHFTV-I 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV--VGNQ 299
+ G+ K T + A + + A E+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGHCTKAMVA-TGAAAYHFGNKIDMVEALKEVPADSLAMGNLDPVSLFKAATPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
VM +L S P F+ + G P +N+
Sbjct: 288 VMKKATLDLLGATKSYPNFVLSSGCDTPPHTPSENIDAFFAA 329
>gi|300855284|ref|YP_003780268.1| putative methyltransferase MtaA/CmuA family [Clostridium
ljungdahlii DSM 13528]
gi|300435399|gb|ADK15166.1| predicted methyltransferase MtaA/CmuA family [Clostridium
ljungdahlii DSM 13528]
Length = 341
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/359 (17%), Positives = 133/359 (37%), Gaps = 34/359 (9%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKN-----FLDMCYT 51
M K+++ L+ ++ PP +M I ++ + + + +
Sbjct: 1 MLSEKERLGLSLKRKKVDRPPCICPGGMM----------NMIVEEVMDLTHCEWPEAHTS 50
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD--PITTQEIYL 108
P+ +L F+ + + + A+++G V PR+ I + +
Sbjct: 51 PKIMADLAAGMYENGGFENFGVPFCMTIEAESMGSKVFLGTKISEPRISSYAINSVTEWR 110
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
+++ + +I +L+ K +I +I P + AS ++ +K + + V
Sbjct: 111 KLKKLEVHSGRAQVVLDTIKLLKGK-NKNIPIIANLTGPISTASSLME--PVKYYKELIV 167
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSV 226
+ + ++DF++D + AQ++AG D+I I D LG F Y +
Sbjct: 168 ----KPKESHEMMDFVTDNLINFGRAQLNAGADLITISDPSGTGEILGPSTFRKYGLFYI 223
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ 286
+II + + + + K L S+AI D + E +
Sbjct: 224 NKIIDGLNKYSKYGIIVHICGRLKSIYKELNEL-HSDAISFDAVTSIKQMCENVTNKAIM 282
Query: 287 GNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
GN+ L N + + + + L SG I + G+ KN+ +V+ + K
Sbjct: 283 GNVSTFSL--QNSSLEEVTSLSKNCLKSGVHILSPACGLGTTTPLKNIQAMVQAANNFK 339
>gi|255524797|ref|ZP_05391747.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296188666|ref|ZP_06857054.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|255511464|gb|EET87754.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296046930|gb|EFG86376.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 359
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/304 (17%), Positives = 113/304 (37%), Gaps = 26/304 (8%)
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-----GPRMDPITTQE-IYL 108
E + R++ D +F+D+ V A+A+G + F E+ P + I + I +
Sbjct: 51 IAEAQIAAYRKFGMDGVRVFTDLYVWAEAMGTKILFPEDNTADLLKPAISDIKDIDKIKV 110
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
NP D L +++ L L + G P+T A +++ +
Sbjct: 111 ANPYKD---GRLPVFIEAMKYLSDALGKEVPCSGGIVGPFTNAFFLVG------IEKMTK 161
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSV 226
++N A + L + EY + G+ I + + + + F + +
Sbjct: 162 LFFKNPEAVHKLCEISLQTCIEYAKVIMDVGLS-PTISEPLSSSTIISPKHFRTFCLPYL 220
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT--DSNAIGLDWSVPLSFALE-LQKEG 283
R++ + K + + + R + +D V LS + + +
Sbjct: 221 RRLLEFINSKGKTC-VLHICGKTEKIWPDIREMASIGVGGFSMDNIVSLSDCKKTIGDKM 279
Query: 284 PVQGNLDP-MRLVVG--NQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
V GN+DP + G N+V +N++++ ++ G + + +N+ ++
Sbjct: 280 KVIGNIDPSNVMYAGTKNEVRNAVINSVMEGYDSPKGYVIMSGCSLPVETPLENIQTMMD 339
Query: 340 TVRS 343
T R
Sbjct: 340 TARE 343
>gi|325261730|ref|ZP_08128468.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
gi|324033184|gb|EGB94461.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
Length = 362
Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 21/226 (9%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++ I++K++ + I + +C AP VAS +I + V + + LL+
Sbjct: 140 ILRASEIVKKEIGDRIYVTAWCNAPLNVASQLIP------MEELLVGMLTDPETLHELLE 193
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGC------LGEHEFENYAARSVGRIISAVRRK 236
+ Y+ GVD I + + +E +A R++SA+
Sbjct: 194 RCLAYTVNYVKYLAETGVDAI----SFGHAMASNTVISAQNYEEFALPYETRLVSAIHDN 249
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV 296
K I+ G + + + S+ I D ++ + Q ++GN+DP L
Sbjct: 250 --GVKAITHICGDIHGIADRIARNGSDIIDFDHLCDVTELKK-QTGKVLRGNIDPSLLAN 306
Query: 297 GN-QVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
G Q + D ++ G FI G +T P+N+ V+
Sbjct: 307 GTAQEVYDQTAKVVQEGKKGGNFILGSGCEVTATTPPENLKAFVQA 352
>gi|187779860|ref|ZP_02996333.1| hypothetical protein CLOSPO_03456 [Clostridium sporogenes ATCC
15579]
gi|187773485|gb|EDU37287.1| hypothetical protein CLOSPO_03456 [Clostridium sporogenes ATCC
15579]
Length = 345
Score = 109 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R + D + + + +A+A+G V + E G P ++
Sbjct: 38 RDYYHSAQLMADLEIALFKRLHHDGVSISTSLRGVAEAMGAKVGYPE-YGISYLIEPAIN 96
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 97 SIDEIESLKVVDPLKDGNLPTLL---EAIRLTRDALMDKVDVGAAMSGPFSVAASVVGT- 152
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 153 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 206
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 207 QFREFSLPALKKNINKIKEKTGGAPAIHICGNSKEIWEDVVN-AGISNFSIDNAEDLEEA 265
Query: 277 LEL-QKEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + GN+ P+ +V + + V + +I + G I
Sbjct: 266 KNIMGGRVVITGNVPPVDIVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 325
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 326 ENIEMFMEAGKTY 338
>gi|310657394|ref|YP_003935115.1| hypothetical protein CLOST_0080 [Clostridium sticklandii DSM 519]
gi|308824172|emb|CBH20210.1| conserved protein of unknown function [Clostridium sticklandii]
Length = 343
Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 60/319 (18%), Positives = 123/319 (38%), Gaps = 24/319 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M K+++ +VL ++ PP +M E ++ + +F D P+
Sbjct: 1 MLTPKERLEKVLNHQEVDRPPCICPGGMMNMV---TEELMKLCEI--SFPDAHQNPQQMA 55
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDP--ITTQEIYLLNPNI 113
+L+ + F+ + + V A+ G ++ N P + I++ + I
Sbjct: 56 DLSEAVYKEGCFENYGVPFCMTVEAEEFGADIDMGSNIYEPHVINYNISSVSEWEKLEAI 115
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
D + ++I IL+ K + +IG P + AS ++ +N
Sbjct: 116 DFSKGRSSTVIEAIKILKAK-NTEVPIIGNITGPISTASSIME------PVVFYKELRKN 168
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVGRIIS 231
+ + + F++ E+ I QI AG D+I I D LG F+ +A + + +II+
Sbjct: 169 NEKAHEYMTFITKQITEFAIKQIEAGADIIAISDPSGTGEILGPKLFDEFAVKYINQIIA 228
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDP 291
V+R + + K ++ +S+ + D V +S A + + GN+
Sbjct: 229 EVKR-LGKRSIVHICGQMKNVYKEVNKI-ESDVLSFDSIVSISEAKKNLGNRLIMGNVST 286
Query: 292 MRL-VVGNQVMIDGVNAIL 309
+ Q + D +
Sbjct: 287 YIIEFGEMQKIADMTKKCV 305
>gi|295318906|gb|ADF99283.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. 230613]
Length = 345
Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 125/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R + D + + + +A+A+G V + E G P ++
Sbjct: 38 RDYYHSAQLMADLEIALFKRLHHDGVSISTSLRGVAEAMGAKVGYPE-YGISYLIEPAIN 96
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 97 SIDEIESLKVVDPLKDGNLPTLL---EAIRLTRDALMDKVDVGAAMSGPFSVAASVVGT- 152
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ A GV I D + +
Sbjct: 153 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEAVAKLGVS-IGFADPVSSTSLISPK 206
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 207 QFREFSLPALKKNINKIKEKTGGAPGIHICGKSKEIWEDVVN-AGISNFSIDNAEDLEEA 265
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 266 KNIMGDRVVITGNVPPVDIVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 325
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 326 ENIEMFMEAGKTY 338
>gi|153938641|ref|YP_001390836.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
gi|152934537|gb|ABS40035.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
Length = 350
Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 125/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R + D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLHHDGVSISTSLRGVAEAMGAKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIRLTRDALMDKVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ A GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEAVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALKKNINKIKEKTGGAPGIHICGKSKEIWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDIVYRGNKEAIFKSVKECIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|312136119|ref|YP_004003457.1| uroporphyrinogen decarboxylase (uro-d) [Caldicellulosiruptor
owensensis OL]
gi|311776170|gb|ADQ05657.1| Uroporphyrinogen decarboxylase (URO-D) [Caldicellulosiruptor
owensensis OL]
Length = 352
Score = 109 bits (273), Expect = 6e-22, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 113/313 (36%), Gaps = 23/313 (7%)
Query: 40 KKFKNF--LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE--- 94
K F D+ + + + + +N A D+ + ++ G V F E
Sbjct: 32 KSIGGFNVRDLAQNADIHFSVLKEISQHFNMVAIATAMDLSIESEEFGCAVSFSLEEVPS 91
Query: 95 --GPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
GP ++ + + + + + + + I L + L ++G P+++A
Sbjct: 92 VIGPLIEKLDEVKKLQI---PESGIKRTRNVIEVIKKL-QLLDIEKPILGTMIGPFSLAV 147
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC 212
+ D + + + LL+ ++ Y A AG + I I + AG
Sbjct: 148 RLF------DMTELMISLMLEPEKVHMLLEKCTEYLRWYANALKTAGANGILIAEPAAGL 201
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L + +++ + I+ +V+ + + F+ ++++ T+ V
Sbjct: 202 LSPQQCLEFSSNYIKEIVKSVQDESFSV-FLHNCGNTQNLVESMLE-TECMGFHFGNCVD 259
Query: 273 L-SFALELQKEGPVQGNLDPMRLVVGNQV--MIDGVNAILDVLGSGP-FIFNLGHGITPQ 328
L + + V GNLDP+ + + V + +L L P F+ + G I
Sbjct: 260 LCKIIKRVPQNKLVFGNLDPVGVFKNDSVEGVYHKTQELLFKLKEYPNFVISSGCDIPYH 319
Query: 329 VDPKNVLDLVKTV 341
+N+ K V
Sbjct: 320 TPIENIKAFFKAV 332
>gi|296132499|ref|YP_003639746.1| methyltransferase MtaA/CmuA family [Thermincola sp. JR]
gi|296031077|gb|ADG81845.1| methyltransferase MtaA/CmuA family [Thermincola potens JR]
Length = 339
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 70/367 (19%), Positives = 126/367 (34%), Gaps = 53/367 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPIW---------LMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
M R ++ + L G ++ P+ M Q Y P D Y
Sbjct: 3 MTSR-ERFMAALNGQPVDRLPVISVCQHATYDQMEQLNSYWP-------------DAMYN 48
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDPITTQEIYLLN 110
E L FDA + A+ALG ++ EG P + ++
Sbjct: 49 AELMARLAGGAYNILGFDAVRVPFCQTHEAEALGAILKEGGREGLPSVKTHPYNIGDPVD 108
Query: 111 -PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P L + + ++I +L+ +L + + ++G P+++A ++ D Q
Sbjct: 109 FPEDFLSRGRIPHLLEAIRLLKSQLGDKVIVMGGVIGPFSIAGQIL------DITQMLKI 162
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
AY+ + ++ A I AG DVI I D + + AA
Sbjct: 163 AYRKPQELVSYIEIGEKAGTMLAQAMIDAGADVIAIEDMMCSLDMITPKIYRELAAPYQK 222
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA----LELQKEG 283
+ I A+ + I G + T +AI ++ V + A
Sbjct: 223 KQIEAL-----SVPTILHICGKLDNIIIDIARTGCSAISVEPVVDVPAALAKFRAEGITT 277
Query: 284 PVQGNLDP-MRLVVGN-QVMIDGVNAILDVLGSGPFIFNL---GHGITPQVDPKNVLDLV 338
P+ G +DP L GN + + A + F++ G + P + + +V
Sbjct: 278 PLIGAIDPVNTLYHGNVEKCREETRACMAKG------FSMISPGCAVPPATRIEVLKAIV 331
Query: 339 KTVRSEK 345
+TV+ K
Sbjct: 332 ETVQEAK 338
>gi|294053890|ref|YP_003547548.1| Uroporphyrinogen decarboxylase (URO-D) [Coraliomargarita
akajimensis DSM 45221]
gi|293613223|gb|ADE53378.1| Uroporphyrinogen decarboxylase (URO-D) [Coraliomargarita
akajimensis DSM 45221]
Length = 456
Score = 109 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 56/347 (16%), Positives = 120/347 (34%), Gaps = 29/347 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF---KNFLDMCYTPEYTVELTLQ 61
K + + L+G + P W+ P + + + + ++ V
Sbjct: 4 KANLFKALKGEATDQTP-WV--------P-FVGVHGGALIGVDATEYLQNADHIVNGMKA 53
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNY 119
+Y D + D+ + A+ LG + + + P + + + P +
Sbjct: 54 ANDKYKPDGLPVVFDLQLEAEILGCQLAWAKETPPSVASHVLDDEYDIEGLPEFSVEKGR 113
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ + +I ++ + + L G P T+A ++ + D + +
Sbjct: 114 IPLVLDAIRRTKEAIGKDVALYGLLTGPLTLALHLRGDDVLLDM-------FDDEDEVPE 166
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
L D+ +D++ + + A + AG+DVI + D + F Y A + +I +
Sbjct: 167 LFDYCADIANQMVKAYLDAGIDVIGVVDPMISQISPEHFSQYVAPPLNKIFDYTAEQ--G 224
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGPVQGNLDPMRLVV- 296
A F G T+ + I +D +V + E Q GNL +++
Sbjct: 225 ALSSLFVCGNATRNIEAMCQTNCDNISVDENVDMKVLAETCAQYGKSFGGNLQLTVVLLL 284
Query: 297 --GNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
D + + G F+ G + V P+N+ + V
Sbjct: 285 GDSADAQKDALRCMDLSGGKPGFVLAPGCDLPYAVKPENLTVIADMV 331
>gi|45358713|ref|NP_988270.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis S2]
gi|45047579|emb|CAF30706.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 352
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 122/314 (38%), Gaps = 21/314 (6%)
Query: 43 KNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR--MDP 100
K+ + E + + ++ +D LF++ +A+A+G+ + + ENE P +P
Sbjct: 42 KSQKEFQLNAEVMAKSHIAGFEKFGYDLIYLFTNCSYLAEAMGQELVYFENE-PASCRNP 100
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
+ + + LP++ ++I +++K++ + + ++ AS
Sbjct: 101 VVKNPEDISKIKVAEGYEANLPVYYEAIELIQKEIGDRANVSVCFSGAFSTAS------T 154
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHE 217
++ H Q Y N + L+ ++ + ++ + G + I + + +
Sbjct: 155 LRGHEQFIKDTYNNPELCHELMKMATESAKNFITEVVKRGA-IPIILEPLSSGSLISPRS 213
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL 277
F+ ++ + ++ +++ T ++ + +D L A
Sbjct: 214 FKQFSKPYITELVDHAHELGTIIPL-HICGKTTKIIEQMSE-TGADVLSIDLC-DLEIAK 270
Query: 278 E-LQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGS--GPFIFNLGHGITPQVDPK 332
E + + + GN+ P L + + + +++ + FI + G + +V +
Sbjct: 271 EKVSGKSVILGNVSPSDDLLFGPVERIHESCKNLIETMNGYEPGFILSTGCETSDKVPME 330
Query: 333 NVLDLVKTVRSEKI 346
N+ L+ + RS +
Sbjct: 331 NIQALMDSARSYGV 344
>gi|194379832|dbj|BAG58268.1| unnamed protein product [Homo sapiens]
Length = 132
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ-- 61
+ L G + P+W MRQAGRYLPE+R+ R ++F C +PE ELTLQ
Sbjct: 15 KNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRA-AQDFFSTCRSPEACCELTLQVR 73
Query: 62 -PIRRYNFDAAILF--SDILVI 80
P +R F ++ + +L
Sbjct: 74 GPQKRERFMPSVCHLATCLLFP 95
>gi|168182418|ref|ZP_02617082.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
gi|237794827|ref|YP_002862379.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
gi|182674433|gb|EDT86394.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
gi|229263667|gb|ACQ54700.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
Length = 350
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 123/313 (39%), Gaps = 26/313 (8%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG------PRMD 99
D ++ + +L + +R D + + + +A+A+G V + E G P ++
Sbjct: 43 RDYYHSAQLMADLEIALFKRLRHDGVSISTSLRGVAEAMGSKVGYPE-YGISYLIEPAIN 101
Query: 100 PITTQE-IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + +++P D L LL ++I + R L + + + P++VA+ ++
Sbjct: 102 SIDEIESLKVVDPLKDGNLPTLL---EAIKLTRDALMDKVDVGAAMSGPFSVAASVVGT- 157
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEH 216
+ + + + L+D +++ + Y+ GV I D + +
Sbjct: 158 -----ENLLKWMIKYPKKVHTLMDIVAESNNRYIEEVAKLGVS-IGFADPVSSTSLISPK 211
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+F ++ ++ + I+ ++ K A I + + ++ + +D + L A
Sbjct: 212 QFREFSLPALKKNINKIKEKTGGAPGIHICGKSKELWEDVVN-AGISNFSIDNAEDLEEA 270
Query: 277 LELQKEGPVQ-GNLDPMRLVV--GNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ + V GN+ P+ +V + + V + +I + G I
Sbjct: 271 KNIMGDRVVITGNVPPVDVVYRGNKEAIFKSVKGCIKKGHDSKKGYILSTGCQIPMHTPI 330
Query: 332 KNVLDLVKTVRSE 344
+N+ ++ ++
Sbjct: 331 ENIEMFMEAGKTY 343
>gi|317483746|ref|ZP_07942689.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316925008|gb|EFV46151.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 448
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/345 (19%), Positives = 127/345 (36%), Gaps = 24/345 (6%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K I E L+GN + P W+ G + + + +M + E ++
Sbjct: 4 KALINEALKGNPVERTP-WVPY-TGSQIANLKGYTAQ-----EMFRDADKLYECCIEAES 56
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLP 122
+Y+ D D+ V A+ LG ++ + +N P + P+ E+ + I +
Sbjct: 57 QYSPDGMTPMFDLQVEAEILGCDLAWYDNTPPTVCSHPL-EGELVIPTRRIQKTDGRIPL 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I + + P+ I + G P+T+AS++ D Y + L+
Sbjct: 116 ILDVMRRFKAAKPD-IAMYGLVCGPFTLASHLRGTNIFMDM-------YDDEDGVKALVA 167
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ +V E I AG D+I D + FE + + + +++R K
Sbjct: 168 YCEEVVREVADYYIEAGCDIIAAVDPLVSQISPDMFETFLSEPYTKFFASMREK--GMPS 225
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDP--MRLVVGN 298
F G LT + I +D +V + A +L + GNL L+
Sbjct: 226 SFFVCGDATKNIEPMCLTRPDCIAIDENVDIVEAKKLTDAHGITISGNLQLTITMLLGTQ 285
Query: 299 QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
Q ++D +G+ FI G + N++ + + V +
Sbjct: 286 QDNQKAAIELMDKMGTHRFILAPGCDVPFDAPAANLIGVGQAVHN 330
>gi|91772496|ref|YP_565188.1| methylcobalamin:coenzyme M methyltransferase [Methanococcoides
burtonii DSM 6242]
gi|91711511|gb|ABE51438.1| methanol-specific methylcobalamin:CoM methyltransferase
[Methanococcoides burtonii DSM 6242]
Length = 310
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 58/330 (17%), Positives = 113/330 (34%), Gaps = 45/330 (13%)
Query: 25 MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADAL 84
M+ +G PE + E L + + D IA L
Sbjct: 1 MQASGTQWPEAH-------------FNSEKMATLAIAGHEIAGLEGIRYPFDGTAIAQTL 47
Query: 85 GRNVRFVENEG-----PRMD--PITTQEI--YLLNPNIDLFLNYLLPIFQSISILRKKLP 135
G + EG P + P T E L P L + I + I++K+
Sbjct: 48 GCTM----GEGTYDTQPSIHDFPFETIEDVKDLTVPENFLESERIKTILDATEIIKKRAD 103
Query: 136 NHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
I +I P + ++ ++++ + + L+ F +D+ EY A
Sbjct: 104 EDIPIIAGHLGPAAITLSLV---GVRNYLM---WFISHPDTIKELITFSTDICIEYSNAL 157
Query: 196 IHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML 253
+ G DV+ I D+ AG + FE R+ ++ K I+ G +
Sbjct: 158 LERGADVVCIPDSEAGPELIPPEFFETMIFPEYKRLNREIKGKT-----IAHICGDSADI 212
Query: 254 KNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLVVG--NQVMIDGVNAILD 310
++ + I ++ V + +A + + + GN+ P+ ++G + + + ++
Sbjct: 213 LEKVAISGFDGISIEEKVDVQYAKSAIGDKACLIGNVSPVHTLLGMKPEKVKEEAKQCIE 272
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
I G G+ P N+ V
Sbjct: 273 DGVD---ILAPGCGLAPHTSLNNLKAFVAA 299
>gi|290766190|gb|ADD60151.1| uroporphyrinogen decarboxylase [Elysia chlorotica]
Length = 118
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFEN 220
+ + R F ++ A + LL L D +L+ QI AG ++Q+FD+ AG LG F
Sbjct: 4 PNPNKARRFLVEHPEASHQLLGMLKDAVTRHLVHQIKAGAQIVQVFDSFAGELGPSLFSK 63
Query: 221 YAARSVGRIISAVRRKYPN-----AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+ + +I V+ + + FAK A + ++ + + + +GLDW
Sbjct: 64 FELPILRQIAKGVKEQLKEMNIDPVPMVVFAKDAHFAIEELSK-SGYDVVGLDWCT 118
>gi|312621405|ref|YP_004023018.1| uroporphyrinogen decarboxylase (uro-d) [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201872|gb|ADQ45199.1| Uroporphyrinogen decarboxylase (URO-D) [Caldicellulosiruptor
kronotskyensis 2002]
Length = 717
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 106/287 (36%), Gaps = 21/287 (7%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENE-----GPRMDPITTQEIYLLNPNIDLFLN 118
+ ++ A D+ V A+ G VRF E GP + + E + ++
Sbjct: 58 QNFDMVAIATAMDLSVEAEEFGCAVRFSSEEVPSVIGPLIKKLDEAEELQI---PEIGSK 114
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + I L + L ++G P+++A + D + + +
Sbjct: 115 RTRNVIEVIKRL-QTLNIEKPILGTMIGPFSLAVRLF------DITELMISLMLEPEKVH 167
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
LL+ S+ Y A AG + + I + AG L + +++ + I+ +V+ +
Sbjct: 168 LLLEKCSEYLRRYAHALKVAGANGLLIAEPAAGLLSPQQCSEFSSHYIKEIVKSVQDESF 227
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ-GNLDPMRLVVG 297
+ F+ ++++ T+ V L ++ + + GNLDP+ +
Sbjct: 228 SV-FLHNCGNTQNLVESMLE-TECMGFHFGNCVDLCEIIKRVPQSKLVFGNLDPVGVFRN 285
Query: 298 NQV--MIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ V + +L L F+ + G I +N+ + V
Sbjct: 286 DSVEGVYHKTQELLFKLKEYSNFVISSGCDIPYHTPIENIKAFFEAV 332
Score = 41.0 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 20/174 (11%)
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHA-------GVDVIQIFDTHAGCLGEHEFENYAARSV 226
+ ++++++D S + + + G + I F+ + F+ +
Sbjct: 536 PDLVDEMIEYMTDFSIKLMEKALKDVEVDFALGWEDI-AFNK-GPIISPQMFKEFLMPRY 593
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-------GLDWSVPLSFALEL 279
+I + + + + G + N + G D P+
Sbjct: 594 KKIADFLHKHGVDI-IGTDCDGNVMPIVELWLEAGFNLMFPVEVHAGTD---PVMLKKLY 649
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
+ G +D +L + ++ + + V+ G FI ++ H P V +N
Sbjct: 650 GDSIRLMGGVDKTKLQGSKEDILKELKRLEKVVEQGGFIPHVDHRCPPDVPYEN 703
>gi|154280402|ref|XP_001541014.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412957|gb|EDN08344.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 109
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQV 300
FAKGA Y L + + + +GLDW A+ + + +QGN DP L +
Sbjct: 1 MTVFAKGAWYALDSLCG-SGYDVVGLDWLHDPVEAMNIARGRVTLQGNADPGCLYGSRES 59
Query: 301 MIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ V ++ +I NLGHGITP VDP+++ + +
Sbjct: 60 ITAIVENMVKGFWGAKKGWIANLGHGITPLVDPEDLRFYFQEIH 103
>gi|1019940|gb|AAC46230.1| methylthiol:coenzyme M methyltransferase 40 kDa subunit
[Methanosarcina barkeri]
Length = 367
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/335 (15%), Positives = 114/335 (34%), Gaps = 33/335 (9%)
Query: 29 GR--YLPEYRQIRKKFKNFLDMC--------YTPEYTVELTLQPIRRYNFDAAILFSDIL 78
GR Y+P + + + +C + + +L P +AA DI
Sbjct: 18 GRVDYVPPANPLAQTTTELMQICNASWPKAHFDSKMMADLAAAPYEICGIEAARPQFDIS 77
Query: 79 VIADALGRNVRF-VENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+ A+ LG + + + P P T + P+ + + +I LRK+
Sbjct: 78 LEAEVLGCKLDWNKPDRPPVTGPAYTDPADITWPDNLEEAGRIPVVLGAIEELRKRYDGM 137
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH 197
+ +I +P+TVA ++ + + + ++ +D Y Q
Sbjct: 138 LPVIPVLTSPFTVAGHIAG------VENLVRWTKTDPEKAHAFIEAATDFVIAYGKLQTA 191
Query: 198 AGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
G ++ D A + ++ + + R+ + I G L
Sbjct: 192 YGAHILFPADPSASGDLISGETYKEFVLPAHKRMAKEISC-----PLILHICGDTSKLLP 246
Query: 256 YRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV--VGNQVMIDGVNA-ILDV 311
Y + + + D +VP+ + ++ E + G+LD + L+ + + + IL
Sbjct: 247 YIKQSGIDCFSFD-AVPVWYCRQVMGNEMSILGSLDVIDLMPNGTPEQVYNRTRECILQG 305
Query: 312 LGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
I ++ +N+ V+ + I
Sbjct: 306 AD----IVGTACDVSFGTSLENLRAYVRACKETPI 336
>gi|206901793|ref|YP_002251418.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Dictyoglomus
thermophilum H-6-12]
gi|206740896|gb|ACI19954.1| uroporphyrinogen decarboxylase (URO-D) superfamily [Dictyoglomus
thermophilum H-6-12]
Length = 349
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/331 (16%), Positives = 121/331 (36%), Gaps = 48/331 (14%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
L YR+I+K+ F ++ + P++ VE + G + F
Sbjct: 51 LEAYREIKKR---FPEVIFIPDFWVEFGMA-----------------QEPSGFGAKIIFK 90
Query: 92 ENEGPRMDPIT---------TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+ P ++PI + NP D F+ +L ++ I K++ I ++
Sbjct: 91 PDATPNIEPILKSADDLPDFVNNLKKPNPKTDGFMPIVLEYYRYIEPKVKEMGEKIKIVA 150
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH--AGV 200
P+ +AS+++ + + + LL+ ++ + ++L AQI V
Sbjct: 151 -ARGPFAIASHLM---GVTEFLVSVKL---YPEEAKKLLEVVTSLVIDFLTAQIEVLHDV 203
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLKNYRRL 259
+ I + D G E ++ +A + +I S+ + I + Y
Sbjct: 204 EGILVLDDIVGFFSEEDYLEFAHPYLKKIFSSF-----DYPIKIYHNDTNNNVYYKYLPD 258
Query: 260 TDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SG 315
N + L Q + + GN+ P+ ++ + + V +L G
Sbjct: 259 LGINIFNFTHLQNIKDVYNLTQGKICLMGNIPPLDVLVNGSKEDVKRSVERVLRDYGMKR 318
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
I + G G++P +N+ ++ ++ +
Sbjct: 319 GIILSAGGGVSPGTPGENIRAMIDALKDFNL 349
>gi|156342876|ref|XP_001620959.1| hypothetical protein NEMVEDRAFT_v1g5010 [Nematostella vectensis]
gi|156206473|gb|EDO28859.1| predicted protein [Nematostella vectensis]
Length = 90
Score = 106 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 50/90 (55%)
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
WT+ SYMI GG + ++R + Y + A + LL L+D E+L+ Q AG ++Q+F+
Sbjct: 1 WTLMSYMIEGGGSTNFTKSRKWLYAHMEASSKLLQILTDAVVEHLVLQARAGAQILQVFE 60
Query: 208 THAGCLGEHEFENYAARSVGRIISAVRRKY 237
+H G LG F ++ + +I V+ K
Sbjct: 61 SHGGLLGHDMFMLFSLPYLRQIAEKVKEKL 90
>gi|257062934|ref|YP_003142606.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
gi|256790587|gb|ACV21257.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
Length = 375
Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/347 (13%), Positives = 125/347 (36%), Gaps = 40/347 (11%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMC-----YTPEYTVELTLQPIRRYN 67
QG ++ P L + + M ++ E +L + ++
Sbjct: 29 QGKPVDRIPCVL------------DTGETMAPLMGMSIADYYHSAEKMCDLEVYLQEHFH 76
Query: 68 FDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
D A L + + +A+A+G + + +N + P + + L ++D L
Sbjct: 77 SDGAGLSTTLRGMAEAMGSEIAYFDNNVAQLKTPALKSLDEVGKAKLV-DVDKD-GRLPI 134
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
I ++++++++KL + + G P+T+A+ ++ + ++ L++
Sbjct: 135 ILKALAMVKEKLGATVPVGGTVTGPFTIAAMVVG-----TQTLLKGLR-KHPDQVKELME 188
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ + + Y+ + GV I D + + + ++ ++ + + + ++ +
Sbjct: 189 VIVENNNRYIERLLDIGV-GIGFADPVSSSSIIRAEQYREFSLPYLKKNVDFIKSRGGGC 247
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDP--MRLVVG 297
+ + + + G D ++ A E+ +QGN+ P + L
Sbjct: 248 GL-HICGKSRALWDDII-TSGIGTFGPDNVEDMAEAKEVLGPHMCIQGNVPPVEVMLYGT 305
Query: 298 N-QVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
V+ +I F+ G + +N+ L+ R
Sbjct: 306 PYDVLRSARESIRKAYDSPRGFVLTSGCQMPVGTPRENMTALMDAAR 352
>gi|33943594|gb|AAQ55473.1| hypothetical protein [Methanococcus voltae PS]
Length = 356
Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/314 (19%), Positives = 115/314 (36%), Gaps = 25/314 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-------EGPR-- 97
+ P+ +LT + + F+ + + V A+A+G V+ E P
Sbjct: 47 EAHNDPQKMADLTYRLYKNGGFENVGVPFCMTVEAEAMGAKVKMGTEITEPRVTEYPINS 106
Query: 98 ----MDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
M+ + + + I SI IL+ K + ++ P +VAS
Sbjct: 107 VTEYMNLTEILSTKKDEKDENGNITREQVILDSIKILKNK-DKDVPVVANLTGPVSVASS 165
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AG 211
++ I + + R + +DF++D ++ AQ+ AG DV+ I D
Sbjct: 166 LME--PITYYKELR----SKPEKVHEYMDFVTDNLIKFGKAQLKAGADVLAISDPSGTGE 219
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
LG F+ YA + ++I + I + + L +S+AI D
Sbjct: 220 ILGPKMFKEYAMPYLNKLIEETQDYAQTGTIIHICGRLKSIYGEIKTL-ESDAISFDSIT 278
Query: 272 PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP 331
+ +E + GN+ L GN I ++ G I + GI +
Sbjct: 279 DVKQVVENVPGKAIMGNVSTFALENGNPESIGRMSNACMKFGVD--ILSPACGIGVRTKL 336
Query: 332 KNVLDLVKTVRSEK 345
+N+ +V T ++
Sbjct: 337 ENIQAMVNTAKNSS 350
>gi|297616508|ref|YP_003701667.1| uroporphyrinogen decarboxylase (URO-D) [Syntrophothermus
lipocalidus DSM 12680]
gi|297144345|gb|ADI01102.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophothermus
lipocalidus DSM 12680]
Length = 362
Score = 106 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/352 (13%), Positives = 131/352 (37%), Gaps = 25/352 (7%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
++++ + +G ++ P+ L EY + + ++P E ++
Sbjct: 14 RERMEALAEGKKVDRIPV------CPILGEYPSVVVGVPVDRYL-HSPGLMAEAQVRAFE 66
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE---IYLLNPNIDLFLNYLL 121
+ +D+ + D L +A+A+G +R+ ++ P+M ++ + L P L
Sbjct: 67 VFGYDSVGVGPDYLGMAEAMGCRLRYAPDQRPQMATAVVEDERSLSRLKPVEAERDGRLP 126
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ ++ ++ + + + G P+T+A+ + ++ ++ + +L
Sbjct: 127 MYLEALKTIKDRVGDRVKVGSGVGGPFTLAACL---RGTEEFLKD---LIRKPAFAYQIL 180
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVRRKYPN 239
+ + Y+ A GV + + A + F +A + I R +
Sbjct: 181 EISTQSIMNYMQACFRLGVSCS-LGEPLASCSVISPRHFRQFAKPYLLTICEWHRSCFGR 239
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVV-- 296
+ + + ++ L + D + A + ++GN+ P+ ++
Sbjct: 240 SLSLHICGTTKPIWEDVAAL-GVSQFSFDEKEDVEEAKRFMGARLVIKGNVPPVSVLARG 298
Query: 297 -GNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+VM + ++ + G + + P+N+ L++ R +
Sbjct: 299 SYEEVMAAATQCLSKGFDSPKGYVLSSGCTVPLETPPENIHALIEASRRFSM 350
>gi|325290645|ref|YP_004266826.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966046|gb|ADY56825.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 342
Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 62/359 (17%), Positives = 122/359 (33%), Gaps = 36/359 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFL--DMCYTPEYTVEL 58
M ++IL V + + P +L R+ K+ F P+ +
Sbjct: 1 MMTSMERILAVCNHELPDRIP---------FLLSTREFGMKYAGFSLSQAFTDPDSFIGA 51
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-------ITTQEIYLLNP 111
++ + +N D + + V+ +ALG + F E++ P +D ++ L+NP
Sbjct: 52 QIKVRQDFNQDGVWDINAVPVVDEALGAKLVFPEDDSPYVDYNPFLKSLAELDKLKLVNP 111
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIKDHGQNRVFA 170
N D + Y+L + + L+ + L + P+ A + F +D
Sbjct: 112 NTDGRMPYMLSL---VQKLKAAAGPDVPLFAWVSQPFRSACMLRGEANFYRDL------- 161
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGR 228
++ LL FL+D Y A I G D+I + A C+ + + R
Sbjct: 162 IRHPNEARELLSFLTDNLIAYGKALIDRGADIIHTSNPVANTECISLKHYREFVHPYSKR 221
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+ +++ G + + + I D F + GN
Sbjct: 222 FLGSLKEYGAKKTMYHTC-GCWSDRLDLVCEENVDIIHFDEIAISEFKQRFSDKVVAFGN 280
Query: 289 LDPMRLV---VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L + ++ + I D G FI + + P+N+ + V +
Sbjct: 281 LHTVDVLHQGTTETAAEAALQCIKDGKAGGRFILSANCSVPRDTPPENIRA-ICRVHEK 338
>gi|253567741|ref|ZP_04845152.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 1_1_6]
gi|251841814|gb|EES69894.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 1_1_6]
Length = 338
Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + I +
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIDALEIPALNKGRIA 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K ++ C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLTAKNITDRPVLAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+D Y +A GV+ + + + AG L + Y++ V I+ V+ +
Sbjct: 170 KCTDFIIRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSVFVKEIVEKVQDDHFTV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKINMEEALKEVPADALAMGNLDPVSLFKMSSPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M +L+ + P F+ + G I P N+
Sbjct: 288 EMKKATLQLLEATAAYPNFVLSSGCDIPPYTPLANINAF 326
>gi|294496125|ref|YP_003542618.1| uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
gi|292667124|gb|ADE36973.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
Length = 361
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 65/377 (17%), Positives = 124/377 (32%), Gaps = 64/377 (16%)
Query: 1 MNERKQKILEVLQGNVINPPP---IWLMRQAGRYLPEYRQIRKKFKNFLDMC-----YTP 52
M + ++ + L+ ++ P +W AG +D C Y+
Sbjct: 1 MTSK-ERFVNALEMKDVDRMPYGYLWF--GAG----------NGVLGRMDACMSDVYYSA 47
Query: 53 EYTVELTLQPIRRYNFDAAILF-SDILVIADALGRNVRFVENEGPRM---DPITTQEIYL 108
E + + Y+ D + +LV A+ALG + ++ P + + E
Sbjct: 48 EGIARAQILARQMYHHDNVMSPWGCLLVEAEALGTRLNIKDDRYPTIAGYQLSSANEYDR 107
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
++P + + + SI IL+K+L + + + G +P +AS ++
Sbjct: 108 IDPLDIERSHRIETVANSIGILKKELKDEVFIKGAMLSPLMLASQVLEASS-----LCIE 162
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF----DTHAGCLGEHEFENYAAR 224
+ LL+ L+ Y I GVD IF + A E +
Sbjct: 163 ML-TEKENVHELLERLTQSCILYADRLIEEGVDG--IFVENGENTADLFSPDMAEEFMLP 219
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR----------RLTDSNAIGLDWSVPLS 274
++ ++ IS A + L D A+G + V +
Sbjct: 220 YTKQLYDHIQDN--GIYVISH-NCAEHAFHEMEASLKPDALNFALGDVEALGKKYGVECT 276
Query: 275 FA------------LELQKEG-PVQGNLDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFN 320
EL+K G + GN++P + + V + +D FI +
Sbjct: 277 KIHKKAGCSPRYCFKELEKHGICLMGNINPNAFCRDSLDDIEHEVKSCMDAAPEKGFILS 336
Query: 321 LGHGITPQVDPKNVLDL 337
G I + + L
Sbjct: 337 TGCEIPLSTPIEEMETL 353
>gi|256003073|ref|ZP_05428065.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|255992764|gb|EEU02854.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
2360]
gi|316939430|gb|ADU73464.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum DSM
1313]
Length = 355
Score = 106 bits (264), Expect = 7e-21, Method: Composition-based stats.
Identities = 78/366 (21%), Positives = 138/366 (37%), Gaps = 48/366 (13%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIW----LMRQA--------GRYLPEYRQIRKKFKNFL 46
MN K++IL VL+ ++ PP+ +M A G LPE
Sbjct: 1 MNSISPKERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAH---------- 50
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPI---T 102
+ EL+ + F+ + + V A+ LG ++ F P+++ +
Sbjct: 51 ---HDDRLMAELSRDVHKYTGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDS 107
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW-TVASYMISGGFIK 161
+ + L + + Q+ L KK I ++G P T AS + F+K
Sbjct: 108 VSNVVYQDIGKMLKKGRIESVIQAAWHLSKK-NKDIPVVGNLTGPLSTSASIVDPVTFLK 166
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFE 219
+ +++ + ++++++D EY I GVD+I I D A LG FE
Sbjct: 167 ELRKDK-------ENAHRVINYVTDFLIEYAKLMIENGVDLISIGDPTATGEILGPKMFE 219
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
YA R + +++ + NA I G +K + S+AI D + L +
Sbjct: 220 EYAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAISTDAMINLRALKDE 277
Query: 280 QKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
GNL L + + D +L I + G++ +N+ L
Sbjct: 278 FPSLTTMGNLSTFLLQFGTPEKVADQTERLLRDGID---IISPACGLSTTSSIQNIKALT 334
Query: 339 KTVRSE 344
KTV+
Sbjct: 335 KTVKEH 340
>gi|257064526|ref|YP_003144198.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
gi|256792179|gb|ACV22849.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
Length = 358
Score = 105 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 61/368 (16%), Positives = 126/368 (34%), Gaps = 46/368 (12%)
Query: 1 MNERKQKIL---EVLQ---GNVINPPPIWLM------RQAGRYLPEYRQIRKKFKNFLDM 48
M RK ++ + G ++ P M R AG Y Y+++
Sbjct: 1 MQVRKDEMTSNERMAAYFDGEEVDRLPAMPMVDSFGPRLAG-YEMRYKRLSA-------- 51
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL 108
E+ VE+ D + + I A G + + P +D + I
Sbjct: 52 ----EHQVEVQKACYDLLGLDGLSIEYGLHGIGQACGTVLNDPADRTPSIDKHVLESIEQ 107
Query: 109 LNP-NIDLFLNYLLPIFQ----SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
++ ++D L P + +L ++ + + P T A+ ++ ++D
Sbjct: 108 VDRLDLDCVLRKNDPWIDMCMTACEMLVDQMGDVVGTSASLTGPLTAAASLLP---MRDL 164
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENY 221
+ L+ F +D + + Q + I I D A + E + +
Sbjct: 165 LVA---TRKKPELARKLIRFSTDAL-KLVSDQFASLGVDIFICDPVASGDIINEKTYREW 220
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
+ + + N G + + + + +D VPL+FA E+
Sbjct: 221 VLPYTQELAPVIHKH--NVAMGYHICGNTNKITGAMLESGCDMLSVDAKVPLTFAKEMGG 278
Query: 282 E-GPVQGNLDPM--RLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLD 336
+ P+ GN+DPM ++ + + V ++ P +I + G + +NV+
Sbjct: 279 DKVPIIGNVDPMDVMMLGTPDEVRENVLRNIEDCVDSPCGYIVSTGCDLPVNTPLENVVA 338
Query: 337 LVKTVRSE 344
+ VR
Sbjct: 339 FMDAVREY 346
>gi|302339240|ref|YP_003804446.1| uroporphyrinogen decarboxylase (URO-D) [Spirochaeta smaragdinae DSM
11293]
gi|301636425|gb|ADK81852.1| Uroporphyrinogen decarboxylase (URO-D) [Spirochaeta smaragdinae DSM
11293]
Length = 449
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/348 (19%), Positives = 133/348 (38%), Gaps = 31/348 (8%)
Query: 5 KQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
K++I +V+ + P W AG + K N ++ E VE L+
Sbjct: 4 KERIAKVMANQKTDKIP-WVPF---AGV-----HAGKLKGYNAKEVSCDLEKLVESLLEV 54
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPIT-TQEIYLLNPNIDLFLNY 119
R Y D + D+ + A+ LG ++ + ++ P + P++ + EI P D
Sbjct: 55 HRIYEPDGQPVVFDLQIEAEILGCDLVWADDAPPTVSSHPLSESDEIPTAIPAPDE--GR 112
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + +++ ++K++ L G P+T+AS++ D
Sbjct: 113 LPMVLEAMRRMKKEVGKDTALYGLICGPFTLASHLRGTNIFMDMML-------EPEKVEK 165
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL + +V+ + G+DVI + D + F+ + A R+ +R
Sbjct: 166 LLAYTLEVAKAMSGYYVETGMDVIAVVDPLISQISPAHFDQFMAAPFSRLFDHIRGL--G 223
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDP---MRL 294
A F G T ++I +D +V L+ A ++ + GN+ P + L
Sbjct: 224 AFSSFFVCGNATANIEPMCKTGPDSISVDENVDLAAAKQITDRYNIVIGGNI-PLTTVML 282
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
Q + ++D + I + G + +N + + +T+R
Sbjct: 283 FGTQQDNMKATLDLIDSVDPKNLIVSPGCDMPYDTPIENSVAIGQTLR 330
>gi|298384651|ref|ZP_06994211.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 1_1_14]
gi|298262930|gb|EFI05794.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 1_1_14]
Length = 338
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + I +
Sbjct: 56 DKYPSAAATVIMDLTVEAEAFGAEIVFPENEVPSVSGRLLADEAAIETLEIPALNKGRIA 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K ++ C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLTAKNITDRPVLAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+D Y +A GV+ + + + AG L + Y++ V I+ V+ +
Sbjct: 170 KCTDFIIRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSVFVKEIVEKVQDDHFTV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L + +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKINMEEALKEVPADALAMGNLDPVSLFKMLSPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M +L+ + P F+ + G I P N+
Sbjct: 288 EMKKVTLQLLEATSAYPNFVLSSGCDIPPYTPLANINAF 326
>gi|302390080|ref|YP_003825901.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
gi|302200708|gb|ADL08278.1| methyltransferase MtaA/CmuA family [Thermosediminibacter oceani DSM
16646]
Length = 616
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/356 (15%), Positives = 117/356 (32%), Gaps = 32/356 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ I V + + P+ LM R IR+ ++ + E
Sbjct: 4 MTSRERVIAAVTMKELPDQVPVNPLLMT---------RGIREGGVRIDEVMFDGEAMARA 54
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPN---- 112
++ ++++ D + +D+ + LG + ++ P + P T+E + +
Sbjct: 55 KIKALQKFGGDVVLAGTDLFTPVENLGAVLEYLPYAQPSLVEHPAPTKEAFYRLKDNYLK 114
Query: 113 --IDLFLNYLLPIFQSISILRKKLPNHITLIGF-CGAPWTVASYMISGGFIKDHGQNRVF 169
+ L I Q I K+ ++ G P T A + +
Sbjct: 115 NGFNPDKGRLRAIQQEIKTFIKEGWKDTHVLATPVGGPITTAQMVTGTDNFFTYL----- 169
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
++ +++ DV AGVDV+ I D L + +
Sbjct: 170 -AEDPDFAKEVIELSLDVVKNVCRMMFEAGVDVVNILDPFCSCDILPPEMYREFGLPYQQ 228
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ + ++ + + + + N G + + + + G
Sbjct: 229 RLFAYIK-EIGGIGLLHTCTYTQPIWPDIVTTGAVNFNGDMYPGADHAKRTIGDKISLMG 287
Query: 288 NLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ P + + + V ++ +G +G FI G I V +N+ L+ T
Sbjct: 288 TVSPYSTLVHGTPEDVAKEVKKLVAEVGYNGGFICMPGCDIDWTVPEENLRALIDT 343
>gi|220932369|ref|YP_002509277.1| methylamine-specific methylcobalamin coenzyme M methyltransferase
[Halothermothrix orenii H 168]
gi|219993679|gb|ACL70282.1| methylamine-specific methylcobalamin coenzyme M methyltransferase
[Halothermothrix orenii H 168]
Length = 448
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/290 (17%), Positives = 111/290 (38%), Gaps = 17/290 (5%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLP 122
+ Y D + D+ + A+ LG +++ E+ P + + + + +
Sbjct: 56 KIYRPDGQPVTFDLQIEAEILGCELKWSEDSPPTVISHPLSGSEEVPDRIPARDEGRIPL 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ + +++++ L G P+T+AS++ D N L+
Sbjct: 116 VLNVMKKMKEEVGEKTALYGLLCGPFTLASHLRGTNLFMDMVL-------NPDYVKKLMA 168
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+ ++V+ I AG+DVI D + F+ + RS + + +R + A
Sbjct: 169 YTTEVARAIASYYIEAGMDVIAAVDPMVSQISPEHFKEFLNRSYTELFAFIRDE--GAFS 226
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ--GNLDP---MRLVVG 297
F G LT+ ++I +D +V L A E+ + + GN+ P + L
Sbjct: 227 SFFVCGNASKNIEEMCLTEPDSISVDENVSLPEAKEITDKHGIVIGGNI-PLTTVMLHGN 285
Query: 298 NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS-EKI 346
Q + +L+ + I + G + +N + + + V EK+
Sbjct: 286 QQDNMKYTVDLLNSVSRDNLIISPGCDMPYDTPVENTVAVEQAVHETEKV 335
>gi|296131688|ref|YP_003638935.1| methyltransferase MtaA/CmuA family [Thermincola sp. JR]
gi|296030266|gb|ADG81034.1| methyltransferase MtaA/CmuA family [Thermincola potens JR]
Length = 611
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/356 (15%), Positives = 113/356 (31%), Gaps = 32/356 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ V + + P+ LM R IR+ + E +
Sbjct: 4 MTSRERVFAAVTMQELPDQLPVNPLLMT---------RGIREGGVRVDQVLLDGEAMAKA 54
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPN---- 112
++ +++ D + +D+ + LG + ++ P + P T+E + +
Sbjct: 55 KIKAHQKFGGDVVVAGTDLFTPVENLGAVLEYLPYAQPSLVEHPAPTKEAFYRLKDNYLK 114
Query: 113 --IDLFLNYLLPIFQSISILRKKLPNHI-TLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ L I + I L ++ L G P T A + +
Sbjct: 115 NGFNPEKGRLRAIQEEIRTLIREGWKDTHALATPVGGPITTAQLVTGTDNFFTYL----- 169
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVG 227
++ +++ DV AGVDV I D L + +
Sbjct: 170 -AEDPDFAKEVIELSLDVVKNVCRMMFEAGVDVCNILDPFCSSDILPPEMYREFGLPYQQ 228
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ + ++ + F + + N G + + + + G
Sbjct: 229 RLFAYIK-EIGGIGFTHTCTFTQPIWSDIANSGTFNFNGDMYPGADHAKRAIGDKISLMG 287
Query: 288 NLDPM--RLVVGNQVMIDGVNAI-LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L P + + + V + ++V +G F+ G I V +N+ L+ T
Sbjct: 288 TLSPYSTLVHGTPEDVAREVKKLAVEVGYNGGFVCMPGCDIDWTVPEENMRALIDT 343
>gi|166032610|ref|ZP_02235439.1| hypothetical protein DORFOR_02325 [Dorea formicigenerans ATCC
27755]
gi|166026967|gb|EDR45724.1| hypothetical protein DORFOR_02325 [Dorea formicigenerans ATCC
27755]
Length = 340
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/321 (18%), Positives = 112/321 (34%), Gaps = 47/321 (14%)
Query: 5 KQKILEVLQGNVINPPPIW------------LMRQAGRYLPEYRQIRKKFKNFLDMCYTP 52
K++I + + + PP LM +A PE + + +
Sbjct: 4 KERIRKAMHQEPTDRPPCICPGGMMNMITTDLMDEANVSWPEAHLNARMMADLAEA--NY 61
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE------GPRMDPITTQEI 106
E F+ + + + A+A+G V G ++ +T E
Sbjct: 62 EKGC-----------FENVGVPFCMTIEAEAMGAQVTMGSKIYEPHVTGYAINSVTEWET 110
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDHGQ 165
+ + + +I IL+ + + +IG P + AS ++ F K+ +
Sbjct: 111 ITP---MSMEEGRAKVVLDAIRILKSR-NLDVPIIGNITGPVSTASSVMEPVIFYKELRK 166
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAA 223
+ + + F++D ++ AQI AG D+I I D LG FE Y
Sbjct: 167 KK-------EEAHRYMQFVTDEIIKFARAQIDAGADIIAISDPSGTGEILGPKLFEEYTV 219
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ I A++++ K + + L S+ + D V + A E K+
Sbjct: 220 KYNNMIWDALQKETMG-KIMHICGQMKNVYPQ-AELIHSDVLSFDSCVSMREAREHLKKH 277
Query: 284 PVQGNLDPMRLVVGNQVMIDG 304
+ GN+ L G ++
Sbjct: 278 ALMGNVSTWTLEFGQPEKVEQ 298
>gi|224371787|ref|YP_002605951.1| UroD [Desulfobacterium autotrophicum HRM2]
gi|223694504|gb|ACN17787.1| UroD [Desulfobacterium autotrophicum HRM2]
Length = 452
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 117/309 (37%), Gaps = 27/309 (8%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPI-TT 103
++ + E + + Y D + D+ + A+ LG + + ++ P + P+ T
Sbjct: 42 EVYQDSDKCFESLKKVNQLYKPDGQPIIFDLQLEAEILGCELLWAKDSPPTVITHPLADT 101
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+EI P+ L + ++ + L G P+T+A ++ D
Sbjct: 102 KEIPTKIPSPAE--GRLPMELDVMRRMKAEFGETTALYGLITGPFTLALHLRGTNIFMDM 159
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
++ + LL++ ++V+ + G+DV+ + D + FE Y A
Sbjct: 160 -------MTDAGYMHRLLNYCAEVAVTIAGYTLDTGMDVVALVDPMISQISPAHFEEYMA 212
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-- 281
R+ +R + AK F G + T ++I +D +V L+ A +
Sbjct: 213 LPFKRVFDYIRER--GAKSSFFVCGNATQKLDAMCRTGCDSISVDENVDLAKAKRICDIH 270
Query: 282 EGPVQGNLDP---MRLVVGNQVMIDGVNAILDVLGSGPFIFNL----GHGITPQVDPKNV 334
+ + GN+ P L Q + V ++D + + NL G + +NV
Sbjct: 271 DVVLGGNI-PLTTAMLFGTQQDNMKAVVDLIDSVETKH---NLIIAPGCDMPYATPIENV 326
Query: 335 LDLVKTVRS 343
L + V +
Sbjct: 327 LAAEQAVHN 335
>gi|281357398|ref|ZP_06243886.1| Uroporphyrinogen decarboxylase (URO-D) [Victivallis vadensis ATCC
BAA-548]
gi|281316001|gb|EFB00027.1| Uroporphyrinogen decarboxylase (URO-D) [Victivallis vadensis ATCC
BAA-548]
Length = 337
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 108/278 (38%), Gaps = 15/278 (5%)
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQS 126
DA + F D+ V A+A G VR+ E+E P + +T E ++ + +
Sbjct: 60 DALVTFMDLSVEAEAFGSPVRYSEHENPTVSGSIASTPEAIDALAVPEVGAKRTAEVLRC 119
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ ++G P+++A G + D + + A A LL +
Sbjct: 120 AELCAANFDR--PVLGGMIGPFSLA------GRLADMTEIMILAAMEPEAAARLLGKTTA 171
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y A GV+ + I + AG L +AA + +II+AV+ +
Sbjct: 172 FLTGYAKAIRSTGVNGLVIAEPAAGLLSPDMCREFAADYLKKIIAAVQDDDFMVVLHNCG 231
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRLV--VGNQVMID 303
A + T + A+ L +V L L ++ E + GN+DP+ ++ + +
Sbjct: 232 NAANRQISALV-STGAAALHLGNAVSLPELLPQIPPEVLLMGNIDPVGVLKNGTPEEVYA 290
Query: 304 GVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
+L + P ++ + G + P V +N+ +
Sbjct: 291 KTAGLLRETAAWPNYVLSSGCDVPPGVSLENIRAFFRA 328
>gi|125975268|ref|YP_001039178.1| methylcobalamin:coenzyme M methyltransferase [Clostridium
thermocellum ATCC 27405]
gi|125715493|gb|ABN53985.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Clostridium thermocellum ATCC 27405]
Length = 355
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/365 (20%), Positives = 136/365 (37%), Gaps = 46/365 (12%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIW----LMRQA--------GRYLPEYRQIRKKFKNFL 46
MN K++IL VL+ ++ PP+ +M A G LPE
Sbjct: 1 MNSISPKERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAH---------- 50
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPI---T 102
+ EL+ + F+ + + V A+ LG ++ F P+++ +
Sbjct: 51 ---HDDRLMAELSRDVHKYTGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDS 107
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
+ + L + + Q+ L KK I ++G P + ++ ++ D
Sbjct: 108 VSNVVYQDIGKMLKKGRIESVIQAAWHLSKK-NKDIPVVGNLTGPLSTSASIV------D 160
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFEN 220
+++ + ++++++D EY I GVD+I I D A LG FE
Sbjct: 161 PVTFLKELRKDNENAHRVINYVTDFLIEYAKLMIENGVDLISIGDPTATGEILGPKMFEE 220
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
YA R + +++ + NA I G +K + S+AI D + L +
Sbjct: 221 YAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAISTDAMINLRALKDEF 278
Query: 281 KEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
GNL L + + D +L I + G++ +N+ L K
Sbjct: 279 PYLTTMGNLSTFLLQFGTPEKVADQTQRLLRDGID---IISPACGLSTTSSIQNIKALTK 335
Query: 340 TVRSE 344
TV+
Sbjct: 336 TVKEH 340
>gi|313898977|ref|ZP_07832504.1| uroporphyrinogen decarboxylase (URO-D) [Clostridium sp. HGF2]
gi|312956176|gb|EFR37817.1| uroporphyrinogen decarboxylase (URO-D) [Clostridium sp. HGF2]
Length = 342
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 106/301 (35%), Gaps = 16/301 (5%)
Query: 47 DMCYTPEYTVELTLQPIRRYNF-DAAILFSDILVIADALGRNVRFVENEGPRMDP--ITT 103
++ E + + + +A + D+ V A A G V F E E P + I
Sbjct: 37 ELVQNAEMQSAVMRRIKEEFPLQEALVSMMDLSVEAQAFGCPVSFHEGEIPAVTSGIIKN 96
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+E + + + + K+ + + G P+++A ++ D
Sbjct: 97 REDGEALRIPKMEEGRMSVYLAGVENITKE--SDRPVFGGVCGPYSLAGRLM------DV 148
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAA 223
+ + + + + +L ++ +Y+ A G + + + AG L + +++
Sbjct: 149 SEIMMQCIMDPKLVHLVLQKVTTFLKQYIQAYKDVGASGVILAEPLAGLLSPAMVQEFSS 208
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ I ++ + + L +D A +V L LE
Sbjct: 209 SYIREITEELQDDTFTVIYHNCGPNTVQSLPEILS-SDCGAWHFGNAVSLKKILEQVPAD 267
Query: 284 PV-QGNLDPMRLVVG--NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVK 339
+ GNLDP+ G + A+L G+ F+ + G + P+ +N+ +
Sbjct: 268 CLIMGNLDPVGCFCGCSADELEQKERALLKECGAYSNFVLSTGCDLPPKAKWENIQRFFR 327
Query: 340 T 340
T
Sbjct: 328 T 328
>gi|224026443|ref|ZP_03644809.1| hypothetical protein BACCOPRO_03199 [Bacteroides coprophilus DSM
18228]
gi|224019679|gb|EEF77677.1| hypothetical protein BACCOPRO_03199 [Bacteroides coprophilus DSM
18228]
Length = 344
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 105/283 (37%), Gaps = 15/283 (5%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLL 121
Y A D+ V A+A G + F E+E P ++ + DL +
Sbjct: 64 DHYPSFATSTIMDLTVEAEAFGCQINFPEDEVPSVVGRLVSDADSVAALQVPDLQAGRVP 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ + + + + ++ C P+++A G + D + V Y + LL
Sbjct: 124 EYLKAVRLAVEHITDR-PVLAGCIGPFSLA------GRLYDMSEIMVAIYTDPEVILQLL 176
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK 241
D + +Y G + I + AG L + Y+ + +I+ ++
Sbjct: 177 DKCTAFILKYCAELKRLGASGVFIAEPAAGLLSNEDCMAYSTVFIRQIVQTLQDDDFAV- 235
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV--VGN 298
+ G + + + A+ ++ + A E V GN+DP+ ++
Sbjct: 236 ILHNCGDTGQCTQAMVE-SGAAALHFGNAIDMVSALQECPSSLLVMGNIDPVGIMKQASP 294
Query: 299 QVMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+V+ A+L+ F+ + G + PQV +N+ +
Sbjct: 295 EVVRKETLALLEATASCRNFVLSTGCDVPPQVSQENIAAFFQA 337
>gi|288573953|ref|ZP_06392310.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288575191|ref|ZP_06393547.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568473|gb|EFC90031.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569694|gb|EFC91251.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 339
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 64/367 (17%), Positives = 121/367 (32%), Gaps = 52/367 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKN-----FLDMCYT 51
M E K +++ L+ ++ PP +M I + + + +
Sbjct: 1 MTELK-RLVGALKRESLDRPPCICPGGMM----------NMIVEDVMDLTDSTWPEAHLD 49
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-------Q 104
E EL F+ + + V A+A+G V + R+
Sbjct: 50 GEAMAELAAGQPENGGFENYGVPFCMTVEAEAMGAPVSMGD----RIHEPRVIGYVMSNS 105
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIKDH 163
+DL + ++IS+L+K+ I +I P ++A+ ++ F KD
Sbjct: 106 GDMNSLKEMDLSSERTAQVCRAISLLKKR-NGDIPVIANLTGPISLATSLVDPSLFYKDM 164
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENY 221
++ L+DF+ + + AQ+ AG DV+ I D LG FE +
Sbjct: 165 RKS-------PEKVQILMDFVVEQLVRFGKAQVEAGADVLTISDPSGTGEILGPKAFERW 217
Query: 222 AARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
A ++ I+ + G ++L + R S+ I D
Sbjct: 218 AIPALNGILDRLSTSVKGTIVHICGRLGGVAHLLDDIR----SDCISFDSITSAKELALR 273
Query: 280 QKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
+ GN+ + + + + +D I GI V LV
Sbjct: 274 LSTKSLMGNVSTLAIETASPEHLKRMAKVCMDQGID---ILAPACGIGAGTALSQVRTLV 330
Query: 339 KTVRSEK 345
+ + K
Sbjct: 331 DSAKERK 337
>gi|293370113|ref|ZP_06616678.1| methyltransferase, MtaA/CmuA family [Bacteroides ovatus SD CMC 3f]
gi|292634841|gb|EFF53365.1| methyltransferase, MtaA/CmuA family [Bacteroides ovatus SD CMC 3f]
Length = 336
Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/279 (21%), Positives = 108/279 (38%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F +NE P + + E + + +P
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPKNEVPSVSGRLLADEAAIEKLEVPALNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 116 EYLKANMLTARNITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPDAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + Y++ V I+ V+ +
Sbjct: 170 KCSDFITRYCMALKATGVNGVIMAEPAAGLLSNEDCLQYSSLFVKEIVEKVQDDHFAV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L G +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKIKMEEALKEVPTDALAMGNLDPVSLFKMAGPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M + +L+ + P F+ + G I P N+
Sbjct: 288 TMKEATLQLLEATRAYPNFVLSSGCDIPPLTPSANIDAF 326
>gi|325290880|ref|YP_004267061.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966281|gb|ADY57060.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 351
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/363 (17%), Positives = 140/363 (38%), Gaps = 50/363 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI-------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPE 53
M+ + + I++ L P+ W + G L E I + T E
Sbjct: 1 MSSK-ELIIKALNREKTERVPVALLSGGAWTFNRKGLTLEEALNIGAGQAA-EIIAETNE 58
Query: 54 YTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP--------RMDPITTQE 105
+ P Y+ A A+G ++F P ++ I T
Sbjct: 59 LAKSDIVWPSSGYHNLAIR----------AIGGEIKFRSKGTPDVQSALLKDINDIETIN 108
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+ L + D+ + + ++ +I+ + + H + P+T+A ++ +G
Sbjct: 109 LDHLTEDKDINM-----LVETAAIVSENIGGHTLIGASQWGPFTLAGHI--------YGV 155
Query: 166 NRVFA--YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENY 221
++ Y++ A +L+F S++ YL I AGV+++ + D + + +FE +
Sbjct: 156 EKLMRSIYRDKEAVKAVLEFTSELCYRYLALFIDAGVEIVSVADPTSSGDLISRKQFEEF 215
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQ 280
+ + +++ V+ K + + + T N + +D+ V + A E +
Sbjct: 216 SLPYLKKVVQKVKEKGALSSIHICGNITDRL--DLIPETGVNNLSIDYKVEIKTAREKIG 273
Query: 281 KEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDL 337
+ GN++P+ ++ + + + +D G +I G + P V +N++ +
Sbjct: 274 DQITFSGNMNPVAIMQNASPEEVAEVCRDCIDQAGWDAGYILMPGCDLPPAVPLENIVSM 333
Query: 338 VKT 340
V T
Sbjct: 334 VDT 336
>gi|297587816|ref|ZP_06946460.1| MtaA/CmuA family methyltransferase [Finegoldia magna ATCC 53516]
gi|297574505|gb|EFH93225.1| MtaA/CmuA family methyltransferase [Finegoldia magna ATCC 53516]
Length = 357
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 54/351 (15%), Positives = 137/351 (39%), Gaps = 43/351 (12%)
Query: 13 QGNVINPPPIWL-MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAA 71
+G ++ P+ M G + +Y + D + + + +R+ D+
Sbjct: 17 KGEEMDRIPVVPDM---GVTMSDYLGYKT-----WDYYSNSDVIADTEVALFKRFYHDSI 68
Query: 72 ILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE-IYLLNPNIDLFLNYLLPIFQ 125
+ + + +A+A+G + + E+ + P + + E + ++NP D L L +
Sbjct: 69 SVSTTLRGMAEAMGTEIWYPEDGISQLKEPVVKKVEDIEKLKIINPLKDGKLPVL---IE 125
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS 185
++ +R ++ + ++ P++VA+ ++ + + + A + ++D ++
Sbjct: 126 ALEKIRDQVGDVASIGAAMTGPFSVAASVLGTETLL------RWMVKKKDALHKIMDIIT 179
Query: 186 DVSAEYLIAQIHAGVDVI-QIF-D--THAGCLGEHEFENYAARSVGRIISAVRRKYP--- 238
+ EY+ G F D + + + +FE ++ + R I+ V++
Sbjct: 180 INNGEYIK---EVGSRGFGMGFADPVSSTTLIRKKQFEEFSLPYLKRNIADVKKYCGSSA 236
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL--V 295
+K +LK+ + LD L A E L + + GN+ P+ + +
Sbjct: 237 GLHICGDSKDLWPLLKD----SGIGNFSLDNCESLLEAKEILGNDIVITGNVPPVDVMYL 292
Query: 296 VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V +D+ P ++ + G I +N+ ++ R
Sbjct: 293 GNTEDVKKSVKECIDIGYDSPCGYVLSTGCQIPKGTKMENIDAFMEYGREF 343
>gi|150401029|ref|YP_001324795.1| uroporphyrinogen decarboxylase [Methanococcus aeolicus Nankai-3]
gi|150013732|gb|ABR56183.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus aeolicus
Nankai-3]
Length = 335
Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 59/356 (16%), Positives = 128/356 (35%), Gaps = 44/356 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIW-----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M + +++L + G+ I+ P AGR + Y ++
Sbjct: 1 MTPK-ERLLGAITGSGIDRIPAAPLIGNF---AGR-MAGY--------TVNEIAKDGTKL 47
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNID 114
+ D + +D+ + A+A+G + + +N+ P + ++ EI + NP D
Sbjct: 48 AKSLEYTYNMIKPDLVTILTDLSIEAEAMGCELEYFDNDVPVVKRHVSLDEISIPNPEKD 107
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ-- 172
+ + I L +K+ N + + P+T+ +
Sbjct: 108 ---GRMPEFLKCIEHLVEKIGNEVFIGMCVPGPFTI---------TGNVHGAESMMMDLV 155
Query: 173 -NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA-GCL-GEHEFENYAARSVGRI 229
N + ++ S ++ A + G + I D A G L +E +A I
Sbjct: 156 MNPDVVKEEIKLATETSKLFINACMDRGA-IPLICDPIASGSLISPKFYEEFALNPSKEI 214
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGN 288
+ + ++ + G + + T ++ + +D +V L E + K+ + GN
Sbjct: 215 VDEIHKR--GLPAVLHICGDSNPIHDLMAETGADFLSVDANVNLKEMKEKVGKKVGIIGN 272
Query: 289 LDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKT 340
+DP + + +I+ ++ P FI G I + +NV +V+
Sbjct: 273 IDPGSTIYLGSKEEVINECKKAIEYASDNPKGFILASGCEIPLESKKENVKAIVEA 328
>gi|255527357|ref|ZP_05394234.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|255508966|gb|EET85329.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
Length = 354
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/364 (15%), Positives = 141/364 (38%), Gaps = 43/364 (11%)
Query: 1 MNERKQKILEVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFK--NFLDMCYTPEYTVE 57
M ++++ E +G ++ P +M + + + N + + +E
Sbjct: 8 MTSKERR--EAYFRGEEVDRLPCAIM---------FEETAAVYAGINVEEYYFDSNKMLE 56
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLF 116
+R + ++ + + + +ALG + + ++ +DP+ + Y + N+++
Sbjct: 57 AEKFIVREFGAESCGINVTLRGLGEALGSKMGYSDSRASFLIDPV--LKDYKMLDNMEVI 114
Query: 117 LNY----LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISG-GFIKDHGQNRVFAY 171
Y L +++ ++K+L N ++ P + AS + +KD QN+
Sbjct: 115 NPYKDGRLPITLKALGKIKKELGNEASVGSGVSGPVSAASAIRGTENLMKDFIQNK---- 170
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRI 229
+ LLDF+ + + Y+ A + I D + A + +F ++ + ++
Sbjct: 171 ---EGVHKLLDFIVECNLAYVEAVYKEHGLMCGIGDPISCANLISPKQFREFSKPYLSKM 227
Query: 230 ISA---VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPV 285
I + + P+ KG L++ + +A +D + L + +
Sbjct: 228 IDGMYKITGEKPSLHICGKTKGIWNDLRDL----NISAFSVDNCEDIGEVKNALGDKVCL 283
Query: 286 QGNLDPMRLVVGN--QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
GN+DP+ ++ + + V + ++ P +I G I +N+ +++
Sbjct: 284 VGNIDPVSIIRNGTVEDVYREVKSCIEKAADSPNGYIVGSGCDIPGGAPIENIKAVIEAT 343
Query: 342 RSEK 345
+
Sbjct: 344 KKYS 347
>gi|253564847|ref|ZP_04842303.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_2_5]
gi|251946312|gb|EES86689.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_2_5]
Length = 334
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 106/280 (37%), Gaps = 14/280 (5%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
A + D+ V A+A G ++F ENE P + + + ++ I +P + ++
Sbjct: 60 ACTVIMDLTVEAEAFGAQIQFSENEVPNVIGRLVSNYEEVVGLKIPTLDIARIPQYLEVN 119
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
L K ++G C P+++A G + D + + Y LLD +
Sbjct: 120 RLAAK-GLDKPVLGGCIGPYSLA------GRLFDMTEIMMAIYTEPETALLLLDKCTQFI 172
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
+Y A G + I + AG L + Y++ V RI+ V+ + +
Sbjct: 173 TQYCRAIKDCGSAGVIIAEPAAGLLSNEDCMQYSSVFVKRIVEEVQDSHFAV-ILHNCGN 231
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVMIDGV 305
G + T + + + ALE V GNLDP+ + + +
Sbjct: 232 MGQCTQAMVA-TGAKGYHFGNKIDMLAALEECPSNALVMGNLDPVGIFKQATAEEVYRQT 290
Query: 306 NAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + P F+ + G + P++ N+ + V+
Sbjct: 291 YTLLQKTTAYPNFVISTGCDVPPEIPLDNIRAFYEAVKDY 330
>gi|255007663|ref|ZP_05279789.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides fragilis
3_1_12]
gi|313145357|ref|ZP_07807550.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides fragilis
3_1_12]
gi|313134124|gb|EFR51484.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides fragilis
3_1_12]
Length = 334
Score = 102 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 99/309 (32%), Gaps = 36/309 (11%)
Query: 35 YRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE 94
Y IR L+ C+ + D+ V A+A G + NE
Sbjct: 45 YHAIRA-----LNECFPQSVACTTIM---------------DLTVEAEAFGAQLSMSSNE 84
Query: 95 GPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
P + + L + Q+ + K ++ C P+++A
Sbjct: 85 VPSVSGRLLAGYADVEALQVPSLESGRVPQYLQADRLAAK--GIDKPVLAGCIGPYSLA- 141
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC 212
G + D + + Y LL+ ++ Y +A GV + + + AG
Sbjct: 142 -----GRLYDMTEIMMAIYTEPETARLLLEKCTEFILRYCLAIKETGVAGVIMAEPAAGL 196
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L + Y++ V RII AV+ + G+ T +
Sbjct: 197 LSNEDCLQYSSVYVKRIIDAVQDDSFTV-ILHNCGNTGHCTPAMLA-TGAQGYHFGNKAD 254
Query: 273 LSFA-LELQKEGPVQGNLDP---MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQ 328
+ A E + V GNLDP R++ +V + G FI + G P+
Sbjct: 255 MLAALRECPSDVWVMGNLDPVGVFRMLTPEEVFAQTEELLSRTGGYANFIVSTGCDTPPE 314
Query: 329 VDPKNVLDL 337
V N+
Sbjct: 315 VPFDNIQAF 323
>gi|298484117|ref|ZP_07002284.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. D22]
gi|298269707|gb|EFI11301.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. D22]
Length = 336
Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + + + +P
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIEKLEVPVLNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 116 EYLKANMLTARNVTDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPDAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + Y++ V II V+ +
Sbjct: 170 KCSDFITRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSLFVKEIIEKVQDDHFAV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L G +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKIKMEEALKEVPADALAMGNLDPVSLFKMAGPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M + +L+ + P F+ + G I P N+
Sbjct: 288 TMKEATLQLLEATRAYPNFVLSSGCDIPPHTPSVNIDVF 326
>gi|296132502|ref|YP_003639749.1| methyltransferase MtaA/CmuA family [Thermincola sp. JR]
gi|296031080|gb|ADG81848.1| methyltransferase MtaA/CmuA family [Thermincola potens JR]
Length = 352
Score = 102 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/358 (14%), Positives = 130/358 (36%), Gaps = 43/358 (12%)
Query: 5 KQKILEVLQGNVINPPPIWL----MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++++L + +G ++ P + + AG Y ++ + +
Sbjct: 7 RERVLRLFEGKEVDRPACYSGMGNVTTAGLEQFGY-KLAETHGD-------AGKMANAAA 58
Query: 61 QPIRRYNFDAAILFSDILVIADALGR------NVRFVENEGPRMDPITTQEIYLLN---- 110
+ + ++ A++ D+ V A+ALG V + P + E +
Sbjct: 59 SSYKLFGYECAVVPFDLCVEAEALGCVMNPYEEVDML--LYPTIKEKIIHEEADMTTFEI 116
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P+ + + ++I +L+ + + + + P+T+A ++ D + +
Sbjct: 117 PDNLTERGRIPVVAEAIKMLKADIGKEVPIGTYLLGPFTLAGQLM------DLNELFKLS 170
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGR 228
++ + +LD L+DV + + AG D I I + A L F++ + +
Sbjct: 171 FKKQKLVAEMLDRLADVIIKIIPYYEAAGADYICIREMGATTDILSPRVFKSLIQPPLIK 230
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ-G 287
I + N I G+ + + + +A+ ++ + + P+ G
Sbjct: 231 IAQNI-----NVPKILHICGSTNSVITVMQESGYDALSIEQKNDMVKTRADIGKEPLVFG 285
Query: 288 NLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
LD ++ + + + L+ + G I P +N+ +V TV+
Sbjct: 286 ALDAYNVLVNGTPEDVRNATVKCLEDGVDAVW---PGCDIWPTAPVQNLKTMVDTVKE 340
>gi|325262239|ref|ZP_08128977.1| hypothetical protein HMPREF0240_01224 [Clostridium sp. D5]
gi|324033693|gb|EGB94970.1| hypothetical protein HMPREF0240_01224 [Clostridium sp. D5]
Length = 337
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/359 (15%), Positives = 114/359 (31%), Gaps = 37/359 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKN--FLDMCYTPEYTVEL 58
MN R++ L + G ++ P + P Q ++ + F D C
Sbjct: 1 MNGRERT-LNFMNGEKVDYIP---------FHPLVMQYAAEYADIPFRDYCLDYRKQCNA 50
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN--EGPRMDPITTQEIY--LLNPNID 114
+ + D A A G + F EN P+ I E +
Sbjct: 51 MITFAEEFGVDWFHPSGFAYCEAGAYGMEIEFPENDCPYPKKHLILDFERDYKKIRKLDI 110
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ ++ + + + + + + G P + ++ + +
Sbjct: 111 KNNDAMMNRVRGVKYYKDTVGDEYFIAGHLEGP------LAEYTDLRGISEGLIDLLDYE 164
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ + + D S ++ Q AG + I I D + E + ++I +
Sbjct: 165 EELSEVFQIIVDNSKRWIDLQADAGAECISIGDAICSQISESMYLERIFPFHVQLIEHAK 224
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP--LSFALELQKEGPVQGNLDPM 292
+ KF + +L + +N + +D V S L K + GNLDP+
Sbjct: 225 KAGVYTKF-HICGDSSRILPHLIE-AGANILDIDSLVKDVPSLVRRLGKNQVLCGNLDPV 282
Query: 293 RL--VVGNQVMIDGVNAILDVLGS----GPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ Q++ D V I+D G G I +N+ ++ V+
Sbjct: 283 SVLRFGTPQMIEDEVKKIIDDTRGKCMIGG-----GCEIPKGTPSENMYTFLEAVKKYS 336
>gi|281419257|ref|ZP_06250273.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
gi|281407123|gb|EFB37385.1| methyltransferase MtaA/CmuA family [Clostridium thermocellum JW20]
Length = 355
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 75/365 (20%), Positives = 137/365 (37%), Gaps = 46/365 (12%)
Query: 1 MNE--RKQKILEVLQGNVINPPPIW----LMRQA--------GRYLPEYRQIRKKFKNFL 46
MN K++IL VL+ ++ PP+ +M A G LPE
Sbjct: 1 MNSISPKERILRVLKKQKVDRPPVICPGGMMNAAIVDIMKTTGHTLPEAH---------- 50
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPI---T 102
+ EL+ + F+ + + V A+ LG ++ F P+++ +
Sbjct: 51 ---HDDRLMAELSRDVHKYTGFENFGIPFCMTVEAEVLGSSINFGTLACEPKIEKEAFDS 107
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
+ + L + + Q+ L KK I ++G P + ++ ++ D
Sbjct: 108 VSNVVYQDIGKMLKKGRIESVIQAAWHLSKK-NKDIPVVGNLTGPLSTSASIV------D 160
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFEN 220
+++ + ++++++D EY I GVD+I I D A LG FE
Sbjct: 161 PVTFLKELRKDNENAHRVINYVTDFLIEYAKLMIENGVDLISIGDPTATGEILGPKMFEE 220
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
YA R + +++ + NA I G +K + S+AI D + L +
Sbjct: 221 YAVRYLNKLVDGIHSL--NAPVIVHICGNINTVKRFIPQIRSDAISTDAMINLRALKDEF 278
Query: 281 KEGPVQGNLDPMRLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
GNL L G + + D +L I + G++ +N+ L K
Sbjct: 279 PYLTTMGNLSTFLLQFGIPEKVADQTQRLLRDGID---IISPACGLSTTSSIQNIKALTK 335
Query: 340 TVRSE 344
TV+
Sbjct: 336 TVKEH 340
>gi|312143373|ref|YP_003994819.1| Uroporphyrinogen decarboxylase (URO-D) [Halanaerobium sp.
'sapolanicus']
gi|311904024|gb|ADQ14465.1| Uroporphyrinogen decarboxylase (URO-D) [Halanaerobium sp.
'sapolanicus']
Length = 449
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 115/306 (37%), Gaps = 20/306 (6%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPI-T 102
++ E E L+ + Y D + D+ V A+ALG + + E+ P + P+
Sbjct: 38 REVLEDEEKLFESLLEVNKIYQPDGQPILFDLQVEAEALGCELMWEEDSPPTVKNHPLKD 97
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKD 162
T EI P D + + +++ + +H L G P+T+AS++ D
Sbjct: 98 TDEIPTKIPQKDEA--RIPMAMEVTRKMKEAVGDHTALYGLICGPFTLASHLRGTNLFMD 155
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
N LL + + ++ + I GVD++ D + F +
Sbjct: 156 M-------ITNPGYVKDLLGYTNKIAKKMASYYIKNGVDIVAAVDPMVSQISPAHFNQFL 208
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK- 281
+ + ++ + + F G T+ + I +D ++PL A E+
Sbjct: 209 KEPYTELFAEIKDQ--DIFASFFVCGDATANIEPMCQTEPDNISIDENIPLEKAKEITDK 266
Query: 282 -EGPVQGNLDP---MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ + GN+ P + L+ Q + V LD + I + G + V +N + +
Sbjct: 267 YDIVLGGNI-PLTTVMLLGNQQDNMKWVIDTLDKVSKENLILSPGCDMPYDVPIENSIAV 325
Query: 338 VKTVRS 343
+ V
Sbjct: 326 EQAVHE 331
>gi|265766194|ref|ZP_06094235.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 2_1_16]
gi|263253862|gb|EEZ25327.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 2_1_16]
Length = 334
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 103/281 (36%), Gaps = 16/281 (5%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
A + D+ V A+A G ++F ENE P + E + L + + ++
Sbjct: 60 ACTVIMDLTVEAEAFGAQIQFSENEVPNVIGRLVNNYEEVVGLKIPTLDIARIPQYLEAN 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ K L + G C P+++A G + D + + Y LLD +
Sbjct: 120 RLAAKGL--DKPVFGGCIGPYSLA------GRLFDMTEIMMAIYTEPETALLLLDKCTRF 171
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+Y A G + I + AG L + Y++ V RI+ V+ + +
Sbjct: 172 ITQYCRAIKDCGSAGVIIAEPAAGLLSNEDCMQYSSVFVKRIVEEVQDSHFAV-ILHNCG 230
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVMIDG 304
G + T + + + ALE V GNLDP+ + + +
Sbjct: 231 NMGQCTQAMVA-TGAKGYHFGNKIDMLAALEECPSNALVMGNLDPVGIFKQATAEEVYRQ 289
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + P F+ + G I P++ N+ + V+
Sbjct: 290 TYTLLQKTTAYPNFVISTGCDIPPEIPLDNIRAFYEAVKDY 330
>gi|116621786|ref|YP_823942.1| uroporphyrinogen decarboxylase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224948|gb|ABJ83657.1| Uroporphyrinogen decarboxylase (URO-D) [Candidatus Solibacter
usitatus Ellin6076]
Length = 357
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/362 (17%), Positives = 131/362 (36%), Gaps = 47/362 (12%)
Query: 6 QKILEVLQGNVINPPPI-------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
+ + ++ P+ W+ P Y I+ +D PE E
Sbjct: 7 ETFKRAARREKMDRIPMALIVDSPWI--------PGYLGIKH-----MDYYLDPELWFES 53
Query: 59 TLQPIRRYNFDAAILFSDIL-----VIADALGRNVRFVENEGPRMDPITTQEIYLLNPNI 113
L+ +R + D + S + LG ++F ++ + + +I
Sbjct: 54 NLKIMREF-PDIIFIPSWWMEYGMAAEPSILGAKIKFWQD-----NTPSEYHTLYRLEDI 107
Query: 114 DLFLNY--LLPIFQSISILR-KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
D F Y F ++++ R K + I +G+ T + + GF++ +
Sbjct: 108 DNFPEYEVDADAFAALTLHRIKMIKPRIEDLGYILPMVTARGPLCTAGFVRGTTHFMIDI 167
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIF--DTHAGCLGEHEFENYAARSVG 227
++ + + L+D + V ++L AQ G V IF D G + E + +A +
Sbjct: 168 VEDPKGAHRLIDLCTRVVIDWLKAQQAVMGDKVEGIFILDDIVGFINEEHYLEFAHPYLK 227
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW---SVPLSFALELQKEGP 284
RI A + K L + N L+W +
Sbjct: 228 RICDAFPDNW--VKLYHNDAEVDACLDHLPD-AGFNV--LNWGKQRHITEVKRRVGDRMC 282
Query: 285 VQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN++P + + + + D +L+ G I ++G G++P + +N+L +++ ++
Sbjct: 283 LMGNVNPLEIAVRGTPEEVKDETLEVLEGAGGEGIILSVGGGVSPGMPRENILAMLEALQ 342
Query: 343 SE 344
Sbjct: 343 EF 344
>gi|53714353|ref|YP_100345.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides fragilis
YCH46]
gi|52217218|dbj|BAD49811.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides fragilis
YCH46]
gi|301163841|emb|CBW23396.1| putative uroporphirinogen biosynthesis-related protein [Bacteroides
fragilis 638R]
Length = 334
Score = 101 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 16/281 (5%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLL-NPNIDLFLNYLLPIFQSI 127
A + D+ V A+A G ++F ENE P + + + ++ L + + ++
Sbjct: 60 ACTVIMDLTVEAEAFGAQIQFSENEVPNVIGRLVSNYEEVVGLKIPTLDIARIPQYLEAN 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ K L + G C P+++A G + D + + Y LLD +
Sbjct: 120 RLAAKGL--DKPVFGGCIGPYSLA------GRLFDMTEIMMAIYTEPETALLLLDKCTRF 171
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+Y A G + I + AG L + Y++ V RI+ V+ + +
Sbjct: 172 ITQYCRAIKDCGSAGVIIAEPAAGLLSNEDCMQYSSVFVKRIVEEVQDSHFAV-ILHNCG 230
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVMIDG 304
G + T + + + ALE V GNLDP+ + + +
Sbjct: 231 NMGQCTQAMVA-TGAKGYHFGNKIDMLAALEECPSNALVMGNLDPVGIFKQATAEEVYRQ 289
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + P F+ + G + P++ N+ + V+
Sbjct: 290 TYTLLQKTTAYPNFVISTGCDVPPEIPLDNIRAFYEAVKDY 330
>gi|310657396|ref|YP_003935117.1| uroporphyrinogen decarboxylase [Clostridium sticklandii DSM 519]
gi|308824174|emb|CBH20212.1| Uroporphyrinogen decarboxylase [Clostridium sticklandii]
Length = 350
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 114/307 (37%), Gaps = 20/307 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITT-- 103
D ++ E V+ ++ + D + + I +A+G + F +N+ P++ P +
Sbjct: 47 DYNHSTEIIVDTIIRTFHMFRADNCSIGPGLQGIPEAMGARLHFSKNDIPQIAAPAISSY 106
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKD 162
+EI L P L +++ I++ KL N + + G P+T +++I F++D
Sbjct: 107 EEISKLKPINPYKDGRLKLYIEALKIVQDKLGNEVNIGNTVGGPFTTTAFLIGTEKFLRD 166
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFEN 220
+N +L+ + + + A + G+ I D A + + +
Sbjct: 167 LR-------RNPDKIKEVLEIATLSTLNVMDAIMDLGI-TPGIADPIASSTLINKSVYRE 218
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-L 279
+ ++ +R++ + + + T LD + +
Sbjct: 219 FVFPTIKTCQDHIRKRMGGTGIMHICGKTKPVWEEIVS-TGIAGFSLDNIEDIGEFRQGY 277
Query: 280 QKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDV--LGSGPFIFNLGHGITPQVDPKNVL 335
+ + V GN+DP + L + + + V + +I G I P+ ++
Sbjct: 278 EDKVLVIGNVDPVGVILNGTKEDIYEAVRVCCEKGMGSKNGYILASGCDIPIGTPPEKIM 337
Query: 336 DLVKTVR 342
+ R
Sbjct: 338 HFIDAAR 344
>gi|60682371|ref|YP_212515.1| putative uroporphirinogen biosynthesis-related protein [Bacteroides
fragilis NCTC 9343]
gi|60493805|emb|CAH08595.1| putative uroporphirinogen biosynthesis-related protein [Bacteroides
fragilis NCTC 9343]
Length = 334
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 16/281 (5%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLL-NPNIDLFLNYLLPIFQSI 127
A + D+ V A+A G ++F ENE P + + + ++ L + + ++
Sbjct: 60 ACTVIMDLTVEAEAFGAQIQFSENEVPNVIGRLVSNYEEVVGLKIPTLDIARIPQYLEAN 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ K L + G C P+++A G + D + + Y LLD +
Sbjct: 120 RLAAKGL--DKPVFGGCIGPYSLA------GRLFDMTEIMMAIYTEPETALLLLDKCTRF 171
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
+Y A G + I + AG L + Y++ V RI+ V+ + +
Sbjct: 172 ITQYCRAIKDCGSAGVIIAEPAAGLLSNEDCMQYSSVFVKRIVEEVQDSHFAV-ILHNCG 230
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVMIDG 304
G + T + + + ALE V GNLDP+ + + +
Sbjct: 231 NMGQCTQAMVA-TGAKGYHFGNKIDMLAALEECPSNALVMGNLDPVGIFKQATAEEVYRQ 289
Query: 305 VNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+L + P F+ + G + P++ N+ + V+
Sbjct: 290 TYTLLQRTTAYPNFVISTGCDVPPEIPLDNIRAFYEAVKDY 330
>gi|300855289|ref|YP_003780273.1| putative uroporphyrinogen-III decarboxylase [Clostridium
ljungdahlii DSM 13528]
gi|300435404|gb|ADK15171.1| predicted uroporphyrinogen-III decarboxylase [Clostridium
ljungdahlii DSM 13528]
Length = 355
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/357 (14%), Positives = 138/357 (38%), Gaps = 32/357 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIW-LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + +++ + +G ++ P +M G L + K + + + T EL
Sbjct: 8 MTPK-ERMKTLSKGEPVDRIPCTPMM---GVTLASF-----IGKTTYEYYHNADVTAELE 58
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQEIYLLNPNID 114
+ +++ D+ + + IA+A+G + + EN + P + ++ L+P
Sbjct: 59 IALFKKFRHDSVGVGVSLREIAEAMGTKIIYPENSISYVDKPAIK--DINDVSKLSPADP 116
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L +++ ++ L + + AP+T AS ++ ++ + +
Sbjct: 117 YKDGKLPVRLKAVKMVNDALGKEVNVSFSIPAPFTTASDLL---GTENFLKA---VLKYP 170
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA 232
+ + LLD +++ + + + + G+ D + + + + +E ++ V + +
Sbjct: 171 KKVHELLDIVTESNFKIIDIIANMGIGFGMC-DPVSSSSIISKRLYEKFSMPYVKKCVDR 229
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP 291
+R K + + + + + T + +D + L A + + + + GN+ P
Sbjct: 230 MREKSGMGTSMHVCGKSKEIWNSLIQ-TGITTLSIDNTEDLEKAKKAVGDKVCLVGNVSP 288
Query: 292 MRL--VVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ ++ + + P F+ + G I +N+ L+ T RS
Sbjct: 289 VDAVRYGTYDDVVRESKLCIKKAYNNPKGFVLSTGCQIPINSPIENIQALMDTARSF 345
>gi|29345753|ref|NP_809256.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides
thetaiotaomicron VPI-5482]
gi|29337646|gb|AAO75450.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides
thetaiotaomicron VPI-5482]
Length = 338
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/279 (21%), Positives = 106/279 (37%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + I +
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIDALEIPALNKGRIA 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L K ++ C P+++A G + D + + Y N A N LL
Sbjct: 116 QYLKANMLTAKNITDRPVLAGCIGPYSLA------GRLYDMSEIMMLIYINLEAANTLLH 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
+D Y +A GV+ + + + AG L + Y++ V I+ V+ +
Sbjct: 170 KCTDFIIRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSVFVKEIVEKVQDDHFTV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKINMEEALKEVPADALAMGNLDPVSLFKMSSPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M +L+ + P F+ + G I P N+
Sbjct: 288 EMKKATLQLLEATAAYPNFVLSSGCDIPPYTPLANINAF 326
>gi|303234343|ref|ZP_07320982.1| methyltransferase, MtaA/CmuA family [Finegoldia magna BVS033A4]
gi|302494459|gb|EFL54226.1| methyltransferase, MtaA/CmuA family [Finegoldia magna BVS033A4]
Length = 357
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/355 (15%), Positives = 133/355 (37%), Gaps = 51/355 (14%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFL-----DMCYTPEYTVELTLQPIRRYN 67
+G ++ P+ P + +FL D + E + R+
Sbjct: 17 KGEEMDRIPVV---------P---DMGVTMSDFLGYKTWDYYSNSDVIAETEVALFNRFK 64
Query: 68 FDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE-IYLLNPNIDLFLNYLL 121
D+ + + + +A+A+G + + E+ + P + + E + ++NP D L L
Sbjct: 65 HDSISVSTTLRGMAEAMGTEIWYPEDGISQLKDPVVKKVEDIEKLKIINPLKDGKLPVL- 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ +R ++ + ++ P++VA+ ++ + + + A + ++
Sbjct: 124 --IEALEKIRDQVGDVASIGAAMTGPFSVAASILGTETLL------RWMVKKKDAVHKIM 175
Query: 182 DFLSDVSAEYLIAQIHAGVDVI-QIF-D--THAGCLGEHEFENYAARSVGRIISAVRRKY 237
D ++ + EY+ G F D + + + +FE ++ + R I+ V++
Sbjct: 176 DIITINNGEYIK---EVGSRGFGMGFADPVSSTTLIRKKQFEEFSLPYLKRNIADVKKYC 232
Query: 238 P---NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+K + K+ + LD L A E L + + GN+ P+
Sbjct: 233 GSSAGLHICGNSKDLWPLFKD----SGIGNFSLDNCESLLEAKEILGNDIVITGNVPPVD 288
Query: 294 L--VVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + V +D+ P ++ + G I +N+ ++ R
Sbjct: 289 VMYLGNTDDVKKSVKECIDIAYDSPCGYVLSTGCQIPKGTKMENIDAFMEYGREF 343
>gi|225158998|ref|ZP_03725309.1| Uroporphyrinogen-III decarboxylase-like protein [Opitutaceae
bacterium TAV2]
gi|224802439|gb|EEG20700.1| Uroporphyrinogen-III decarboxylase-like protein [Opitutaceae
bacterium TAV2]
Length = 338
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 58/348 (16%), Positives = 127/348 (36%), Gaps = 32/348 (9%)
Query: 6 QKILEVLQGNVIN---PPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++ L ++ G ++ PI LMR A + I + +F V Q
Sbjct: 3 ERYLNMIDGKPVDFVPRIPI-LMRYAAEH------IGSNYGDF---TADYRVLVRANQQC 52
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLN-- 118
+ D SD + G + + + G +D P+ ++ L +
Sbjct: 53 AADFGIDQMNTMSDPYRETEGYGAKIIYERDSGAHIDAPPLADGDLDAARLAALLRPDPM 112
Query: 119 ---YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ +++ + +++G+ P A+ +++ + +
Sbjct: 113 TSPRMRDRIEAVRAYAAQNGTTHSIMGWIEGP---AAEAADVRGVENFFID---LLTDPE 166
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
L+D ++V+ + QI G D I I D A + +E+ I+ +++
Sbjct: 167 RAGDLMDICNEVALRFAKIQIDLGADTIGIGDAVASQVSRDVYESLILPREQWIVRELKK 226
Query: 236 KYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP-- 291
P+ K + ++L L + I +D V ++ E L + + GN+DP
Sbjct: 227 HKPSLKVRLHICGNITHLLPGLATL-GIDVIDVDHMVDMTKTREALGRGVTLAGNIDPVA 285
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
L + + + + +++G+ PF+ N G I +N+ L +
Sbjct: 286 EVLRGTPESIRRRLLELYELVGN-PFMINAGCEIPSGTPLENLRALCE 332
>gi|288573638|ref|ZP_06391995.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569379|gb|EFC90936.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 350
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/355 (13%), Positives = 127/355 (35%), Gaps = 28/355 (7%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL-MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + +++ +G ++ P+ M G E+ + K + ++ E EL
Sbjct: 1 MTPK-ERMTAFSKGESMDRIPVVPDM---GVTKSEFIGVTTK-----EYYHSAEKMAELE 51
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRMDPI--TTQEIYLLNPNIDLF 116
+ + D+ + + + +A+A+G + + +N ++P+ ++ L P
Sbjct: 52 IALFDYLHHDSIGISTTLRGMAEAMGSRIGYPEDNISYLLEPVVKDFDDVDRLEPADPRR 111
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L + +++ I++ L + + P++VA+ ++ + +
Sbjct: 112 DGKLPLLLKALEIIKDTLGDVADIGASMTGPFSVAASVVGT------ENLLKWMVRAPEK 165
Query: 177 FNWLLDFLSDVSAEYLIA--QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ +++ +++ + Y+ A Q+ GV + + +F +++ + R ++ V
Sbjct: 166 VHQVMEVITESNDRYIEAVAQLGLGVGFCDPV-SSTSVISPKQFRSFSLPYMKRNVTHVA 224
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ-GNLDPMR 293
+ + + ++ +D L A + + V GN+ P+
Sbjct: 225 DCTGGRPTMHICGKSRALWED-CVEAGIGNFSIDNVEDLEDAKNVMGDRVVITGNIPPVD 283
Query: 294 LVVGN---QVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+V V I FI G I +N+ ++ R
Sbjct: 284 IVANGTVADVFRSARECIRKAWDSPKGFILCTGCQIPKGTPMENIKAIMDAGREY 338
>gi|302379925|ref|ZP_07268404.1| methyltransferase, MtaA/CmuA family [Finegoldia magna
ACS-171-V-Col3]
gi|302312151|gb|EFK94153.1| methyltransferase, MtaA/CmuA family [Finegoldia magna
ACS-171-V-Col3]
Length = 358
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/355 (14%), Positives = 136/355 (38%), Gaps = 51/355 (14%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFL-----DMCYTPEYTVELTLQPIRRYN 67
+G ++ P+ P + +FL D + + + +R+
Sbjct: 17 KGEEMDRIPVV---------P---DMGVTMSDFLGYKTWDYYSNSDVIADTEVALFKRFY 64
Query: 68 FDAAILFSDILVIADALGRNVRFVEN-----EGPRMDPITTQE-IYLLNPNIDLFLNYLL 121
D+ + + + +A+A+G + + E+ + P + + E + +++P D L L
Sbjct: 65 HDSISVSTTLRGMAEAMGTEIWYSEDSISQLKDPVVKKVEDIEKLKIIDPLKDGKLPVL- 123
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+++ +R ++ + ++ P++VA+ ++ + + + A + ++
Sbjct: 124 --IEALEKIRDQVGDVASIGAAMTGPFSVAASVLGTETLL------RWMVKKKDAVHKIM 175
Query: 182 DFLSDVSAEYLIAQIHAGVDVI-QIF-D--THAGCLGEHEFENYAARSVGRIISAVRRKY 237
D ++ + EY+ G F D + + + +FE ++ + R I+ V++
Sbjct: 176 DIITINNGEYIK---EVGSRGFGMGFADPVSSTTLIRKKQFEEFSLPYLKRNIADVKKYC 232
Query: 238 P---NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+K +LK+ + LD L A E L + + GN+ P+
Sbjct: 233 GSSAGLHICGNSKNLWPLLKD----SGIGNFSLDNCENLLEAKEILGNDIVITGNVPPVD 288
Query: 294 L--VVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + + + V +D+ P ++ + G I +N+ ++ R
Sbjct: 289 VMYLGNTEDVKKSVKECIDIAYDSPCGYVLSTGCQIPKGTKMENIDAFMEYGREF 343
>gi|295107597|emb|CBL05140.1| Uroporphyrinogen-III decarboxylase [Gordonibacter pamelaeae
7-10-1-b]
Length = 334
Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 113/306 (36%), Gaps = 18/306 (5%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT 103
+ D+ + + E +RY AA+ F D+ V A+A G ++E P + +
Sbjct: 33 SVRDLIGSSDCQAEAMRLVAQRYPTAAAVSFMDLSVEAEAFGAETVVSDDEVPTV--VGA 90
Query: 104 QEIYLLNPN----IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
+P+ + + ++I+ + L + ++ P+++A ++
Sbjct: 91 LVDEDTDPSGIVVPAVGVGRTGLYVEAIAKV-APLIDDRPVLAGAIGPFSLAGRLM---- 145
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFE 219
D + V Y+ + +L+ ++ A Y A AG D + + + AG L E
Sbjct: 146 --DVSEVMVMCYEEPELVHAVLEKAAEFVAAYADAFRAAGADGVVLAEPLAGLLSPDLAE 203
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+++ V RI+ V+ G + + T + A ++ ++ + L
Sbjct: 204 EFSSAYVRRIVKEVQTDSFAV-VYHNCGGGVPKMMDSIVDTGAAAFHFGNAISMADVMPL 262
Query: 280 QK-EGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVL 335
+ GN+ P + + +L+ P F+ + G + P +N+
Sbjct: 263 VPADRVAMGNVAPAEQLRNGTPDSVRAATLEVLEACAGYPNFVISTGCDVPPMAPLENID 322
Query: 336 DLVKTV 341
V
Sbjct: 323 AFFAAV 328
>gi|262382383|ref|ZP_06075520.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_1_33B]
gi|262295261|gb|EEY83192.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_1_33B]
Length = 337
Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/300 (18%), Positives = 114/300 (38%), Gaps = 16/300 (5%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQ 104
D E +Y A+ + D+ V A+A G + + +NE P + ++
Sbjct: 38 DAVTNGEIHARAVKLLAEKYPSAASSVIMDLTVEAEAFGAEIHYSKNEVPSVIGRLVSNL 97
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
E L + ++ ++ + ++ C P+++A G + D
Sbjct: 98 EEVEKLQIPSLENGRVQEYIKANRLIAE--DTLKPVVAGCIGPYSLA------GRLYDMS 149
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
+ + Y LL ++ Y +A AG + I + + AG L +++
Sbjct: 150 EIMMAMYIEPDCIKLLLSKCTEFIKNYCVALKSAGANGILMAEPAAGLLSNEACLEFSST 209
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEG 283
V I+S V+ + + F+ +G K T + + + AL + K+
Sbjct: 210 YVQEIVSEVQDESFSI-FLHNCGNSGQCTKAMVA-TGAYGYHFGNGIDMLLALDQCPKDV 267
Query: 284 PVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKT 340
V GN+DP+ + ++V+ D +L + P F+ + G P+V +N+ K
Sbjct: 268 LVMGNIDPVSMFKMASSRVLYDATKDLLLRTANYPNFVLSSGCDTPPEVPFENIEMFYKA 327
>gi|237722212|ref|ZP_04552693.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_2_4]
gi|229448022|gb|EEO53813.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_2_4]
Length = 338
Score = 100 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 107/278 (38%), Gaps = 13/278 (4%)
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPI 123
+Y AA + D+ V A+A G + F ENE P + + E + I +P
Sbjct: 57 KYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIEKLEIPALNKGRIPE 116
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 117 YLKANMLTARNITDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPEAANTLLRK 170
Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFI 243
SD Y +A GV+ + + + AG L + Y++ V I+ V+ + +
Sbjct: 171 CSDFITRYCMALKATGVNGVIMAEPAAGLLSNEDCLQYSSLFVKEIVEKVQDDHFAV-VL 229
Query: 244 SFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQV 300
G + T + + + AL+ + GNLDP+ L G +
Sbjct: 230 HNCGNTGNCTQAMV-YTGAAVYHFGNKIKMEEALKEVPTDALAMGNLDPVSLFKMAGPET 288
Query: 301 MIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M + +L+ + P F+ + G I P N+
Sbjct: 289 MKEATLQLLEATRAYPNFVLSSGCDIPPHTSSINIDAF 326
>gi|295085154|emb|CBK66677.1| Uroporphyrinogen-III decarboxylase [Bacteroides xylanisolvens XB1A]
Length = 338
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 108/279 (38%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + + +P
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIEKLEVPALNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 116 EYLKANMLTARNVTDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPDAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + Y++ V II V+ +
Sbjct: 170 KCSDFITRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSLFVKEIIEKVQDDHFAV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L G +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKIKMEEALKEIPTDALAMGNLDPVSLFKMAGPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M + +L+ + P F+ + G I P N+
Sbjct: 288 TMKEATLQLLEATRAYPNFVLSSGCDIPPHTSSVNIDAF 326
>gi|160883732|ref|ZP_02064735.1| hypothetical protein BACOVA_01704 [Bacteroides ovatus ATCC 8483]
gi|299146245|ref|ZP_07039313.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_1_23]
gi|156110817|gb|EDO12562.1| hypothetical protein BACOVA_01704 [Bacteroides ovatus ATCC 8483]
gi|298516736|gb|EFI40617.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_1_23]
Length = 336
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 109/279 (39%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F +NE P + + E + + +P
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPKNEVPSVSGRLLADEAAIEKLEVPALNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 116 EYLKANMLTARNVTDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPDAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + Y++ V II V+ ++
Sbjct: 170 KCSDFITRYCMALKATGVNGVIMAEPAAGLLSNEDCLQYSSLFVKEIIEKVQDEHFAV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L G +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKIKMEEALKEVPTDALAMGNLDPVSLFKMAGPE 287
Query: 300 VMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDL 337
M + +L+ + P F+ + G I P N+
Sbjct: 288 TMKEATLQLLETTRAYPNFVLSSGCDIPPHTSSINIDAF 326
>gi|20092958|ref|NP_619033.1| methylcobalamin:CoM methyltransferase isozyme A [Methanosarcina
acetivorans C2A]
gi|19918272|gb|AAM07513.1| methylcobalamin:CoM methyltransferase isozyme A [Methanosarcina
acetivorans C2A]
Length = 344
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/350 (17%), Positives = 127/350 (36%), Gaps = 29/350 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYL-PEYRQIRKKFKNFLDMCYTPEYTVELT 59
M + +++ +L ++ P+ G + EY + K ++ D E V
Sbjct: 5 MTSK-ERVFAMLNRKPVDRVPVI----TGSVMVKEYIE--KSGSSWPDYHSNAEMMVNTV 57
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLN 118
D ++ + + + ALG V+ + P + + D FL
Sbjct: 58 SLMHTDAGLDNIVMPFGMFIESMALGLEVKMGR---IDIQPSVRSFFNKPEEVKYDNFLE 114
Query: 119 --YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
Y+ +I + ++K P+ + F AP T+A ++ + + Q +
Sbjct: 115 DKYVQTTLDAIKLAKEKYPD-AAVTAFLVAPITLAGDLMGAE---NLSMLSIKCLQKEKQ 170
Query: 177 FNWLLDFLS---DVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIIS 231
+ D++S +++ Y A + AG D++ D A + + A + I
Sbjct: 171 MQKMKDWISIALEINKIYAEACVEAGADILYYSDASASPNLVMPEFYYQVAVPAEKEIGD 230
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDP 291
V + + G + T ++ + ++ +V + A ++ + PV GN+ P
Sbjct: 231 FV--HHLGCPWELHICGDTVPIIEGMASTGADCLSVEQAVNMEEATKIAGDVPVVGNVTP 288
Query: 292 MRLVVGNQV-MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ +V G + +I+ LD LG G P + VK
Sbjct: 289 LLMVEGTEAQIIEETRKGLDGGAKASM---LGCGTPPLSSSDKLKTWVKA 335
>gi|261884843|ref|ZP_06008882.1| uroporphyrinogen decarboxylase [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 86
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 271 VPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQV 329
PL A E L +QGN++P RL + DGV+ IL ++ IFNLGHGI P V
Sbjct: 7 TPLKMAKETLGSRYVLQGNMEPTRLY-SKDAIDDGVDEILSIMRGHRHIFNLGHGILPDV 65
Query: 330 DPKNVLDLVKTVRSEK 345
+N +K+V+ +
Sbjct: 66 PVENAKYFIKSVQEKS 81
>gi|83591164|ref|YP_431173.1| uroporphyrinogen decarboxylase [Moorella thermoacetica ATCC 39073]
gi|83574078|gb|ABC20630.1| Uroporphyrinogen decarboxylase (URO-D) [Moorella thermoacetica ATCC
39073]
Length = 352
Score = 99 bits (248), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 102/283 (36%), Gaps = 25/283 (8%)
Query: 77 ILVIADALGRNVRFVENEGPR--------MDPITTQEIYLLNPN--IDLFLNYLLPIFQS 126
++ ALG + F ++ P+ + + E+ L+YL +
Sbjct: 75 LMAELGALGAELEFPDDAPPQSRGGAFEDIREVENWEVPDPKKADYTSQTLDYLKYFCKH 134
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
+ +K + FCG P ++ ++ + + Y + + LL ++D
Sbjct: 135 LPEEPRKKWGFLDGHIFCGGPGEISGLLLG------YDKFSYAMYDYPQLVHILLRKVTD 188
Query: 187 VSAEYLIAQIH-AGV-DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
Y+ AQI G + I+D G L F+ + + + + V + I
Sbjct: 189 FIKSYIDAQIEIVGEPKRVIIWDHIPGMLSRELFDEFIHPYMKEVFTHVEKA---TLRIY 245
Query: 245 FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDP--MRLVVGNQVMI 302
+ L + R +N + L + + K+ V GN+ P L+ N+ +
Sbjct: 246 HNENNYPHLLDLMRDIPANVCHIGPKHDLVESKRVLKK-CVMGNVHPIQELLLGTNEEIE 304
Query: 303 DGVNAILDVLGSGPFI-FNLGHGITPQVDPKNVLDLVKTVRSE 344
I++ G G + + G G+ P+ + + L+ +
Sbjct: 305 AKCKTIIETAGRGGGLWLSTGGGMAPETPVEKMQVLIDCTKKY 347
>gi|288575192|ref|ZP_06393548.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288568474|gb|EFC90032.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 343
Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 55/310 (17%), Positives = 124/310 (40%), Gaps = 25/310 (8%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPI 101
+ + P + + RR+ D A +F+D+ +A+A+G ++F +++ P +D
Sbjct: 25 EFNHDPRALADAVIATHRRFGGDGAKVFTDLFTVAEAMGAKIKFPDDDTADLLEPAID-- 82
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
I L P + +++ ++ ++ + + P+T A ++I
Sbjct: 83 DVSRIDELEPIDPEKACRIPTHLKAMEMVVDEISSEVPCTALVVGPFTTAFFLIG----- 137
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFE 219
+ ++ ++ + L + + Y+ A G+ I I + + + F
Sbjct: 138 -VEKMTRLMVRDPQSVDRLCQVSLESTLRYVDAAASRGM-GISIAEPLSSCTVVSPKHFR 195
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-E 278
YAA VG++++ ++ K K G ++ + NA+ +D VPL + +
Sbjct: 196 RYAAPVVGKLLNHIKDKGMGTSMHICGKTDGIW-EDLADM-GLNALSIDNVVPLPGCVSK 253
Query: 279 LQKEGPVQGNLDP-MRLVVG--NQVMIDGVNAILDVLGSGPFIFNL--GHGITPQVDPKN 333
+ + G +DP + G +V ++ I D S F L G G+ + +N
Sbjct: 254 VGDRMKIMGKVDPSSVMFAGTREEVRKACLSDIRDAYRSPKG-FALMSGCGLPVETPIRN 312
Query: 334 VLDLVKTVRS 343
+ ++ R
Sbjct: 313 IDAMMDATRE 322
>gi|237716008|ref|ZP_04546489.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. D1]
gi|262407622|ref|ZP_06084170.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_1_22]
gi|294647013|ref|ZP_06724628.1| methyltransferase, MtaA/CmuA family [Bacteroides ovatus SD CC 2a]
gi|294808388|ref|ZP_06767143.1| methyltransferase, MtaA/CmuA family [Bacteroides xylanisolvens SD
CC 1b]
gi|229443655|gb|EEO49446.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. D1]
gi|262354430|gb|EEZ03522.1| methylcobamide:CoM methyltransferase mtbA [Bacteroides sp. 2_1_22]
gi|292637646|gb|EFF56049.1| methyltransferase, MtaA/CmuA family [Bacteroides ovatus SD CC 2a]
gi|294444464|gb|EFG13176.1| methyltransferase, MtaA/CmuA family [Bacteroides xylanisolvens SD
CC 1b]
Length = 336
Score = 99 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/279 (21%), Positives = 106/279 (37%), Gaps = 13/279 (4%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLP 122
+Y AA + D+ V A+A G + F ENE P + + E + + +P
Sbjct: 56 DKYPAAAATVIMDLTVEAEAFGAEIIFPENEVPSVSGRLLADEAAIEKLEVPALNKGRIP 115
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++L + + C P+++A G + D + + Y N A N LL
Sbjct: 116 EYLKANMLTARNVTDRPVFAGCIGPYSLA------GRLYDMSEIMMLIYINPDAANTLLR 169
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
SD Y +A GV+ + + + AG L + Y++ V II V+ +
Sbjct: 170 KCSDFITRYCMALKATGVNGVVMAEPAAGLLSNEDCLQYSSLFVKEIIEKVQDDHFAV-V 228
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNLDPMRLV--VGNQ 299
+ G + T + A + + AL+ + GNLDP+ L G +
Sbjct: 229 LHNCGNTGNCTQAMV-YTGAAAYHFGNKIKMEEALKEVPADALAMGNLDPVSLFKMAGPE 287
Query: 300 VMIDGVNAILDV-LGSGPFIFNLGHGITPQVDPKNVLDL 337
M + +L+ F+ + G I P N+
Sbjct: 288 TMKEATLQLLEATCAYPNFVLSSGCDIPPHTPSVNIDVF 326
>gi|258513388|ref|YP_003189610.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfotomaculum
acetoxidans DSM 771]
gi|257777093|gb|ACV60987.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfotomaculum
acetoxidans DSM 771]
Length = 337
Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 100/274 (36%), Gaps = 13/274 (4%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
A+ D+ A+ G V F + E P + I + + + P+F +
Sbjct: 62 GAMTGMDLTSEAETFGCGVSFSDTEAPHITGEIVFDRASAESLQVPSVNDGRGPVFVKAA 121
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
L + G P+++A ++ + ++ + + +L+ +
Sbjct: 122 GLAAQNITDRPTFGGMLGPYSLAGVLMG------IERALKATIKDGQTVHIVLEKCTCYL 175
Query: 189 AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
Y A AG + I I + AG L + ++++ V I+ AV+ + + G
Sbjct: 176 IAYAKAFKEAGANGILIAEPTAGLLPPKHCDEFSSKYVKEIVDAVQDE--GFFVVLHNCG 233
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGV 305
L + T + +V + ++ + V GN+DP R++ +++ +
Sbjct: 234 NTKKLVDSMVSTGAKGYHFGNAVQMVDVISQIPPKYLVFGNIDPARVLNEGTEELIKETT 293
Query: 306 NAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLV 338
+L+ + + + G + +V N+
Sbjct: 294 KDLLEKMKPYKHFVLSSGCDLPMEVPIANLKSFF 327
>gi|288573954|ref|ZP_06392311.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569695|gb|EFC91252.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 364
Score = 99.5 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/310 (17%), Positives = 124/310 (40%), Gaps = 25/310 (8%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-----PRMDPI 101
+ + P + + RR+ D A +F+D+ +A+A+G ++F +++ P +D
Sbjct: 46 EFNHDPRALADAVIATHRRFGGDGAKVFTDLFTVAEAMGAKIKFPDDDTADLLEPAID-- 103
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
I L P + +++ ++ ++ + + P+T A ++I
Sbjct: 104 DVSRIDELEPIDPEKACRIPTHLKAMEMVVDEISSEVPCTALVVGPFTTAFFLIG----- 158
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFE 219
+ ++ ++ + L + + Y+ A G+ I I + + + F
Sbjct: 159 -VEKMTRLMVRDPQSVDRLCQVSLESTLRYVDAAASRGM-GISIAEPLSSCTVVSPKHFR 216
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-E 278
YAA VG++++ ++ K K G ++ + NA+ +D VPL + +
Sbjct: 217 RYAAPVVGKLLNHIKDKGMGTSMHICGKTDGIW-EDLADM-GLNALSIDNVVPLPGCVSK 274
Query: 279 LQKEGPVQGNLDP-MRLVVG--NQVMIDGVNAILDVLGSGPFIFNL--GHGITPQVDPKN 333
+ + G +DP + G +V ++ I D S F L G G+ + +N
Sbjct: 275 VGDRMKIMGKVDPSSVMFAGTREEVRKACLSDIRDAYRSPKG-FALMSGCGLPVETPIRN 333
Query: 334 VLDLVKTVRS 343
+ ++ R
Sbjct: 334 IDAMMDATRE 343
>gi|213417205|ref|ZP_03350349.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 56
Score = 99.2 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F+ +C E
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELA 56
>gi|166033381|ref|ZP_02236210.1| hypothetical protein DORFOR_03107 [Dorea formicigenerans ATCC
27755]
gi|166027738|gb|EDR46495.1| hypothetical protein DORFOR_03107 [Dorea formicigenerans ATCC
27755]
Length = 366
Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/325 (16%), Positives = 118/325 (36%), Gaps = 40/325 (12%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
LPEY ++ E EL +++ D A L + + +A+A+G +++
Sbjct: 52 LPEY-------------YFSAEKMCELEEYIYNKFHSDGAGLSTTLRGMAEAMGSKIKYS 98
Query: 92 EN-----EGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGA 146
+ E P + + E+ L L I + + +++++L + + + G
Sbjct: 99 DYNIAQLETPAISSLD--EVDKLKRINVDEDGRLPIILKGLKMVKERLGDKVPVSGTVTG 156
Query: 147 PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF 206
P+TVAS ++ + + ++D +++ + Y+ + GV +
Sbjct: 157 PFTVASMLVGTE-----NLLKGMV-KQPDKVLQMMDIITENNNRYIQRLLDMGV-GVGFA 209
Query: 207 D--THAGCLGEHEFENYAARSVGRIISAVRRKYP--NAKFISFAKGAGYMLKNYRRLTDS 262
D + L ++E ++ + + ++ + ++ +L T
Sbjct: 210 DPVSSTSLLRVKQYEKFSLPFFQKNVDFIKSQGGGCGLHICGTSRKLWELLI----PTGI 265
Query: 263 NAIGLDWSVPLSFALEL-QKEGPVQGNLDP---MRLVVGNQVMIDGVNAILDVLG-SGPF 317
G D ++ A E+ +QGN+ P MRL V+ +I F
Sbjct: 266 GTFGPDNVEDMAEAKEVLGPYMCIQGNVPPVEVMRLGTPYDVLRASRESIRKAYDSPKGF 325
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVR 342
+ G +N+ L+ R
Sbjct: 326 VLTSGCQTPMFTPEENMTALMDAAR 350
>gi|166032616|ref|ZP_02235445.1| hypothetical protein DORFOR_02331 [Dorea formicigenerans ATCC
27755]
gi|166026973|gb|EDR45730.1| hypothetical protein DORFOR_02331 [Dorea formicigenerans ATCC
27755]
Length = 356
Score = 98.8 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 108/306 (35%), Gaps = 21/306 (6%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITT-QEIY 107
+PE + ++ +R+ D A++ + ++ LG E + P + P+ + +I
Sbjct: 49 SPENEAKCQIEAYKRFGNDLAVIEYGLHMVGVGLGGTTNDPEFQTPAIATYPLESLDDID 108
Query: 108 LLNPNI--DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
L+P +L ++ I+++++ + + + P+T A+
Sbjct: 109 KLDPERLKKENDPHLRHCLEACHIVKEEIGDEVPVGVLITGPYTAATSCYPAE-----KL 163
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
R + L+ F +D + I GV ++Q D A L + +++ +
Sbjct: 164 FRAMRKS-PEKVHRLVQFTTDCLIDIYKEFIQEGVLILQC-DPLASGTILRKSQYQEFVL 221
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
++ A+ + + S+ I +D V L ++
Sbjct: 222 PYAKKVNQAIHDAGGMV-CYHICGDTTKTIDDMAD-AGSDMISVDNVVDLEHVKNTAGQK 279
Query: 283 GPVQGNLDP--MRLVVGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLV 338
P+ GN+ P + + M V L +I G ++ QV +N+ +
Sbjct: 280 MPILGNVAPVDYFIQGTKEEMDAAVKRCLQKAWDSPNGYILASGCDLSGQVKLENIEAFM 339
Query: 339 KTVRSE 344
R
Sbjct: 340 NAARKY 345
>gi|60680324|ref|YP_210468.1| putative methylcobamide:CoM methyltransferase [Bacteroides fragilis
NCTC 9343]
gi|60491758|emb|CAH06516.1| putative methylcobamide:CoM methyltransferase [Bacteroides fragilis
NCTC 9343]
Length = 334
Score = 98.4 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 103/308 (33%), Gaps = 34/308 (11%)
Query: 35 YRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE 94
Y IR L+ C+ + D+ V A+A G + NE
Sbjct: 45 YHAIRA-----LNECFPQSAACTTIM---------------DLTVEAEAFGARLSMSPNE 84
Query: 95 GP-RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
P + T + I + +P + L + ++ C P+++A
Sbjct: 85 VPSVCGRLLTGYADVEALQIPSVESGRMPQYLLADRLAAE-GIDKPVLAGCIGPYSLA-- 141
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
G + D + + Y LL+ ++ Y +A GV + + + AG L
Sbjct: 142 ----GRLYDMTEIMMAIYTEPDTVLLLLEKCTEFILRYCLAIKETGVAGVIMAEPAAGLL 197
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
+ + Y++ V RII AV+ + G+ T + +
Sbjct: 198 SNEDCQRYSSVYVKRIIDAVQDDSFAV-ILHNCGNTGHCTAAMLA-TGAKGYHFGNKADM 255
Query: 274 SFA-LELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQV 329
A E + V GNLDP+ + + + + +L G FI + G P+V
Sbjct: 256 ITALRECPSDVWVMGNLDPVGVFRVLTPEDVFARTEELLTCTGEYANFIISTGCDTPPEV 315
Query: 330 DPKNVLDL 337
N+
Sbjct: 316 PFDNIQAF 323
>gi|265765469|ref|ZP_06093744.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 2_1_16]
gi|263254853|gb|EEZ26287.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 2_1_16]
Length = 334
Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 96/274 (35%), Gaps = 16/274 (5%)
Query: 70 AAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLLPIFQSI 127
A D+ V A+A G + NE P + +T + + +
Sbjct: 60 ACTTIMDLTVEAEAFGARLSMSPNEVPSVCGRLLTGYADVEALQIPSVESGRMPQYLLAD 119
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ +++ ++ C P+++A G + D + + Y LL+ ++
Sbjct: 120 RLAAEEI--DKPVLASCIGPYSLA------GRLYDMTEIMMAIYTEPDTVLLLLEKCTEF 171
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
Y +A GV + + + AG L + + Y++ V RII AV+ +
Sbjct: 172 ILRYCLAIKETGVAGVIMAEPAAGLLSNEDCQRYSSVYVKRIIDAVQDDSFAV-ILHNCG 230
Query: 248 GAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRLV--VGNQVMIDG 304
G+ T + + A E + V GNLDP+ + + + +
Sbjct: 231 NTGHCTAAMLA-TGAKGYHFGNKADMITALRECPSDVWVMGNLDPVGVFRVLTPEDVFAR 289
Query: 305 VNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDL 337
+L G FI + G P+V N+
Sbjct: 290 TEELLTCTGEYANFIISTGCDTPPEVPFDNIQAF 323
>gi|301161857|emb|CBW21401.1| putative methylcobamide:CoM methyltransferase [Bacteroides fragilis
638R]
Length = 334
Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 103/308 (33%), Gaps = 34/308 (11%)
Query: 35 YRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE 94
Y IR L+ C+ + D+ V A+A G + NE
Sbjct: 45 YHAIRA-----LNECFPQSAACTTIM---------------DLTVEAEAFGARLSMSPNE 84
Query: 95 GP-RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
P + T + I + +P + L + ++ C P+++A
Sbjct: 85 VPSVCGRLLTGYADVEALQIPSVESGRMPQYLLADRLAAE-GIDKPVLAGCIGPYSLA-- 141
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
G + D + + Y LL+ ++ Y +A GV + + + AG L
Sbjct: 142 ----GRLYDMTEIMMAIYTEPDTVLLLLEKCTEFILRYCLAIKETGVAGVIMAEPAAGLL 197
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
+ + Y++ V RII AV+ + G+ T + +
Sbjct: 198 SNEDCQRYSSVYVKRIIDAVQDDSFAV-ILHNCGNTGHCTAAMLA-TGAKGYHFGNKADM 255
Query: 274 SFA-LELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQV 329
A E + V GNLDP+ + + + + +L G FI + G P+V
Sbjct: 256 ITALRECPSDVWVMGNLDPVGVFRVLTPEDVFARTEELLTCTGEYANFIISTGCDTPPEV 315
Query: 330 DPKNVLDL 337
N+
Sbjct: 316 PFDNIQAF 323
>gi|53712138|ref|YP_098130.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides fragilis
YCH46]
gi|253563824|ref|ZP_04841281.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_2_5]
gi|52215003|dbj|BAD47596.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides fragilis
YCH46]
gi|251947600|gb|EES87882.1| methylcobamide:CoM methyltransferase MtbA [Bacteroides sp. 3_2_5]
Length = 334
Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 103/308 (33%), Gaps = 34/308 (11%)
Query: 35 YRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE 94
Y IR L+ C+ + D+ V A+A G + NE
Sbjct: 45 YHAIRA-----LNECFPQSAACTTIM---------------DLTVEAEAFGARLSMSPNE 84
Query: 95 GP-RMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
P + T + I + +P + L + ++ C P+++A
Sbjct: 85 VPSVCGRLLTGYADVEALQIPSVESGRMPQYLLADRLAAE-GIDKPVLAGCIGPYSLA-- 141
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL 213
G + D + + Y LL+ ++ Y +A GV + + + AG L
Sbjct: 142 ----GRLYDMTEIMMAIYTEPDTVLLLLEKCTEFILRYCLAIKETGVAGVIMAEPAAGLL 197
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
+ + Y++ V RII AV+ + G+ T + +
Sbjct: 198 SNEDCQRYSSVYVKRIIDAVQDDSFAV-ILHNCGNTGHCTAAMLA-TGAKGYHFGNKADM 255
Query: 274 SFA-LELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQV 329
A E + V GNLDP+ + + + + +L G FI + G P+V
Sbjct: 256 ITALRECPSDVWVMGNLDPVGVFRVLTPEDVFARTEELLTCTGEYANFIISTGCDTPPEV 315
Query: 330 DPKNVLDL 337
N+
Sbjct: 316 PFDNIQAF 323
>gi|325290642|ref|YP_004266823.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966043|gb|ADY56822.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 350
Score = 98.4 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/362 (15%), Positives = 126/362 (34%), Gaps = 41/362 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF-LDMCYTPEYTVELT 59
M R +++ + ++ P+ A P R ++F D+ PE +
Sbjct: 1 MTSR-ERVFNAYKFKPVDYIPV-FANDAA-SGP-----RLIGRDFDEDILNDPEALAKAE 52
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVE------NEGPRMDPITTQEIYLLNPNI 113
L D + +LG + F E + I + +P
Sbjct: 53 LAVWEVVRAD-CFNIRTAYAVQKSLGCKLYFPHDDHHQFGEAAIFTKEQAEAIKIPDPET 111
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY-- 171
+ +L + I ++RK+ + + + V S+ + + G ++
Sbjct: 112 E---PHLKVVLDQIRLMRKEAGDEVV--------YHVTSHGVFNTVSRLLGVEKMMNVLA 160
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRI 229
+ F+ + + ++D A AG D+ ++ D L F + GR+
Sbjct: 161 TDRDFFDVIGNKVTDTIIWMAQAVKRAGGDIFELADGMCSPSVLSPKMFTDIVIPHQGRL 220
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLK--NYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQ 286
+ + +A I+ G + + T +++ V ++ A ++ + PV
Sbjct: 221 LRGIH----DAGLIAQFHPCGGEYPIIDQMKDTGADSFWFSELVDIAVAQKIFYRRFPVA 276
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
G +DP + + + + A+++ L I G G+ P + +N+ +V VR
Sbjct: 277 GGVDPANTLFLGTPETVDRDIKAMIERLKHKSGVIIQPGCGLAPNIPVENLKAMVDAVRK 336
Query: 344 EK 345
Sbjct: 337 YS 338
>gi|332980809|ref|YP_004462250.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Mahella australiensis 50-1 BON]
gi|332698487|gb|AEE95428.1| methylamine-specific methylcobalamin:coenzyme M methyltransferase
[Mahella australiensis 50-1 BON]
Length = 459
Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/300 (18%), Positives = 106/300 (35%), Gaps = 29/300 (9%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDLFLNYLL 121
Y D + D+ + A+ LG + + E P + P+ + + + + +
Sbjct: 57 ETYKPDGQPIMFDLQIEAEILGCELMWAEKAPPSVKTHPLESNDD-IPDYIPKEHDGRIP 115
Query: 122 PIFQSISILRK-KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ L+ + + L G P+T+AS++ D L
Sbjct: 116 VALNTLKRLKDGAIGQNTALYGLICGPFTLASHLRGNDIFMDM-------IDKPEYVKAL 168
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L + DV+ I AG DV+ + D + F + RI S +R++
Sbjct: 169 LAYTVDVAEAMAGYYIDAGADVVAVVDPLVSQISPMHFAEFLTDGFNRIFSYIRQR--GT 226
Query: 241 KFISFAKGAGYM-LKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGN--LDPMRLV 295
F G ++ + T + I +D ++ + A ++ + GN L + L
Sbjct: 227 FSSFFVCGNATRNIEEMCK-TQPDCISIDENIDMPEAKKITDRYNIVIGGNIPLTSVMLY 285
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV----------LDLVKTVRSEK 345
+ V +LD + I + G + V P+NV + + V+S K
Sbjct: 286 GSQYDNMKYVIGLLDAMDHHNLIISPGCDMPYDVPPENVVGVRQAIDDTQAVREIVKSYK 345
>gi|325289124|ref|YP_004265305.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324964525|gb|ADY55304.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 344
Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/319 (16%), Positives = 109/319 (34%), Gaps = 30/319 (9%)
Query: 39 RKKFK--NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP 96
R+ + +FL + P+ E Q R Y D + + ALG V+F GP
Sbjct: 34 REGYTQESFLRL--PPQEQAEFAYQATRTYGGDMLQVGLGGTLAVKALGGKVKFRA-HGP 90
Query: 97 --RMDPITTQ--EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
+P+ ++ ++ + + + + + + +T A
Sbjct: 91 ADVTEPLIENISDLDKIDLDRVKEDEHYQNALEVARHTLRLAGDEYPVSVGSWGLYTQAG 150
Query: 153 YMISGGFIKDHGQNRVFAYQ--NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
+ +G ++ + A LLDF ++ + G V + D A
Sbjct: 151 LL--------YGAEKLMRGSIRDKAAIRALLDFTFELLKATTGEIVDMGASVGSLADPTA 202
Query: 211 G--CLGEHEFENYAARSVGRIIS--AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG 266
+ F A + ++ + + ++ T N +
Sbjct: 203 SGDMISRELFAELALPYLRKVYDWYRSKGLLTSLHICGNINDRIGLIPE----TGVNILS 258
Query: 267 LDWSVPLSFALELQKEGPVQG-NLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGH 323
+D+ V + A +L K V G N DP+ ++ + + I++ +G+ P+I G
Sbjct: 259 IDYKVDIGRAAKLLKGKTVIGGNADPVAVIMQSDAEAVRKAYLEIIERVGNAPYIVMAGC 318
Query: 324 GITPQVDPKNVLDLVKTVR 342
GI + +N+ +V
Sbjct: 319 GIPSRTPLENIQAMVDIAH 337
>gi|298675013|ref|YP_003726763.1| uroporphyrinogen decarboxylase [Methanohalobium evestigatum Z-7303]
gi|298288001|gb|ADI73967.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalobium evestigatum
Z-7303]
Length = 367
Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/377 (14%), Positives = 131/377 (34%), Gaps = 48/377 (12%)
Query: 1 MNERKQKILEVLQGNVINPPP---IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M + ++ + L+ ++ P +W AG + +++ + D+ Y+ E +
Sbjct: 5 MTSK-ERFINALEMKDVDRVPYGYLWF--GAGDAV-----LKRMNTSMKDVYYSSEGIAK 56
Query: 58 LTLQPIRRYNFDAAILF-SDILVIADALGRNVRFVENEGPRMDP---ITTQEIYLLNPNI 113
+ Y+ D + +LV A+ALG V E+ P + +++E + P
Sbjct: 57 AQMLAREMYHHDNVMSPWGCLLVEAEALGTIVNIKEDRYPTVAEYALKSSKEYDTIEPQN 116
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ + +S+SIL+K+L + + + G +P +A+ ++ +
Sbjct: 117 IKKSERIETVSKSVSILKKELNDEVFITGSIMSPLMLATQVLE-----MVKLCEEMIMEK 171
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF--DTHAGCLGEHEFENYAARSVGRIIS 231
++LL+ L+D S Y + GVD + + A + +A + ++ +
Sbjct: 172 -ENVHYLLERLTDGSILYADRMLEEGVDGFLVENGENTADLFSPQMADEFALKYTKKLYN 230
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDS------NAIGLDWSVPLSFALELQK---- 281
+ + + K+ D+ + L +
Sbjct: 231 HIHKNGGYV-ISHNCAEHAFHEKDVSMKPDAMNFAFGDVSSLGNRYGVECIKNHNHKNIG 289
Query: 282 -------------EGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP 327
+ GN++P + + V + + + FI + G I
Sbjct: 290 CGPRYCFKDFEKYRTCLMGNINPNVFGNGSLDDIENEVESCIKAAPNKGFILSTGCEIPL 349
Query: 328 QVDPKNVLDLVKTVRSE 344
+ + L T++S
Sbjct: 350 GTKQEKMDTLWNTMKSH 366
>gi|262189742|ref|ZP_06048099.1| uroporphyrinogen III decarboxylase [Vibrio cholerae CT 5369-93]
gi|262034378|gb|EEY52761.1| uroporphyrinogen III decarboxylase [Vibrio cholerae CT 5369-93]
Length = 70
Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKT 340
+QGN+DP L + + V +IL G G +FNLGHGI V P+N V+
Sbjct: 1 MALQGNMDPSILYAPAPRIREEVASILAGFGQGGTGHVFNLGHGIHLDVPPENAGVFVEA 60
Query: 341 VRSEK 345
V
Sbjct: 61 VHELS 65
>gi|83590926|ref|YP_430935.1| methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
gi|83573840|gb|ABC20392.1| Methyltransferase MtaA/CmuA [Moorella thermoacetica ATCC 39073]
Length = 350
Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/371 (18%), Positives = 122/371 (32%), Gaps = 68/371 (18%)
Query: 6 QKILEVLQGNVINPPP---------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
++++ +QG ++ P + M G Y PE P
Sbjct: 11 ERVIAAVQGQEVDRFPLVTPTSVVTVESMTVTGVYFPEAH-------------TDPYKMA 57
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRF---VENEGPRMDPITT---QEIYLLN 110
L FD + IL+ A ALG V +++P+ ++
Sbjct: 58 ALAAAGHELLGFDTVTPYFSILLEAAALGCEVDLNSVDAMPAIKINPLKNLLERKWDWRP 117
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P L + + +I +L+K+ + ++G PWT+A ++ ++D V
Sbjct: 118 PANFLDRQPVKALLAAIRLLKKRYGRRVAVVGKVIGPWTLAYHL---CGVQDFLLGLVL- 173
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC-----LGEHEFENYAARS 225
A LL+ L V +A+I AGVDV+ T A + + ++
Sbjct: 174 --EPEAVRELLERLLAVPLRLAVAEIEAGVDVL----TWADHATSDLVSAAAYRDFLLPL 227
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGP 284
R + + I G Y A D P+ L L
Sbjct: 228 HQRAMEQLAGSC---PVILHTCGRATDRVAYFARAGFTAFHFDSRNPVGDLLSLANGRLN 284
Query: 285 VQGNL-DPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGI---TPQ------VDPKNV 334
+ G + +P L+ G + V A ++ L GI P+ +N+
Sbjct: 285 LIGGINNPQTLLNGK---VKEVRATIEGLLQA--------GIKMVAPECAVPLRTPNQNL 333
Query: 335 LDLVKTVRSEK 345
+V+ VR
Sbjct: 334 RAIVQAVRDFS 344
>gi|217968093|ref|YP_002353599.1| uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
gi|217337192|gb|ACK42985.1| Uroporphyrinogen decarboxylase (URO-D) [Dictyoglomus turgidum DSM
6724]
Length = 349
Score = 97.2 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 104/281 (37%), Gaps = 28/281 (9%)
Query: 81 ADALGRNVRFVENEGPRMDPITTQEIYLL---------NPNIDLFLNYLLPIFQSISILR 131
A G + F N P ++PI + L NP D F+ +L ++ I
Sbjct: 80 PSAFGAKIVFKPNATPNIEPILSSADDLPTFIARLKTPNPKTDGFMPIVLEYYKYIEPKV 139
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
K + I ++ P ++S+++ + + + L++ +++ ++
Sbjct: 140 KGMGEKIKIVA-ARGPLAISSHLM---GVTEFLVSVKL---YPEEAKRLIEIATNLVIDF 192
Query: 192 LIAQIH--AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKG 248
L AQI V+ I + D G E ++ +A + +I S+ + I
Sbjct: 193 LTAQIEVLHDVEGILVLDDIVGFFSEEDYLEFAHPYLKKIFSSF-----DYPVKIYHNDT 247
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV--VGNQVMIDGV 305
+ Y N + L Q + + GN+ P+ ++ + + V
Sbjct: 248 NNNVYYKYLPELGINIFNFTHLQNIKDVYNLTQGKMCLMGNVPPLDVLVNGSKEDVKRVV 307
Query: 306 NAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
IL G + + G G++P +N+ ++ T RS K
Sbjct: 308 EKILMDYGMKKGLLLSAGGGVSPGTPGENIRAMIDTSRSFK 348
>gi|325958778|ref|YP_004290244.1| methyltransferase MtaA/CmuA family [Methanobacterium sp. AL-21]
gi|325330210|gb|ADZ09272.1| methyltransferase MtaA/CmuA family [Methanobacterium sp. AL-21]
Length = 353
Score = 96.5 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/374 (15%), Positives = 128/374 (34%), Gaps = 62/374 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMCYT 51
MN + +L+VL G + P+ M Q + PE + K Y
Sbjct: 1 MNLKNN-VLKVLSGEKTDLTPVISVTQLGVVEAMEQTDAFWPEAHEDADKMATLGSSLY- 58
Query: 52 PEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV-ENEGPRMDPITTQEIYLLN 110
+ A + + V A+ALG V E + P++ + +
Sbjct: 59 ------------ELVGLECARIPFCLTVEAEALGCEVDLGNEEKTPQIRSTPFKTASEIE 106
Query: 111 -PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P L + + ++I L++K + + +I P+T+ +++ + + + +
Sbjct: 107 VPANFLSNGRIPVVLEAIEKLKQKYGDTLPIIVGITGPFTLTGHLLGVENLVRYMKTK-- 164
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVG 227
+D D +Y A G D+I + + A + +F++ ++
Sbjct: 165 ----PDEIETAIDNSLDACMDYAEAISKVGPDIICVAEPTAAPELIDPLQFKSMVKPALE 220
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--- 284
+ + ++ K K + ++K+ + + I ++ V + A E ++G
Sbjct: 221 DLANFIKTK----KVLHICGSTQPIIKDMATI-GYDGISVEEKVDIKKAKEELEKGSNVM 275
Query: 285 ----------------VQGNLD--PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
+ GN+ + + + V +LD I G+
Sbjct: 276 KVGGKSMPRGSSSISKIIGNISTTQTLFRGTEEEIKNEVKMVLDAGID---ILAPSCGLA 332
Query: 327 PQVDPKNVLDLVKT 340
P+ KN+ ++
Sbjct: 333 PRSPLKNIEAMINA 346
>gi|322805815|emb|CBZ03380.1| methylcobalamin:coenzyme M methyltransferase,methylamine-specific
[Clostridium botulinum H04402 065]
Length = 356
Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/351 (14%), Positives = 130/351 (37%), Gaps = 40/351 (11%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGINTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGVHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA---VRRKYPN 239
++ + ++ A V I D + + +FE + + + + + K P+
Sbjct: 181 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
K L T +D + + + + GN+DP+ ++
Sbjct: 241 LHICGKTKHIWSRLDKMNIST----FSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNG 296
Query: 299 --QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + D V ++ P ++ G I +N+ +++ +
Sbjct: 297 TLEDVYDTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|168180155|ref|ZP_02614819.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
gi|182669043|gb|EDT81019.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
Length = 356
Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/351 (14%), Positives = 129/351 (36%), Gaps = 40/351 (11%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGINTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +A G + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEAFGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA---VRRKYPN 239
++ + ++ A V I D + + +FE + + + + + K P+
Sbjct: 181 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
K L T +D + + + + GN+DP+ ++
Sbjct: 241 LHICGKTKHIWSRLDKMNIST----FSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNG 296
Query: 299 --QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + D V ++ P ++ G I +N+ +++ +
Sbjct: 297 TLEDVYDTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|148642578|ref|YP_001273091.1| methylcobalamin:coenzyme M methyltransferase, MtaA
[Methanobrevibacter smithii ATCC 35061]
gi|222445927|ref|ZP_03608442.1| hypothetical protein METSMIALI_01575 [Methanobrevibacter smithii
DSM 2375]
gi|148551595|gb|ABQ86723.1| methylcobalamin:coenzyme M methyltransferase, MtaA
[Methanobrevibacter smithii ATCC 35061]
gi|222435492|gb|EEE42657.1| hypothetical protein METSMIALI_01575 [Methanobrevibacter smithii
DSM 2375]
Length = 334
Score = 96.1 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 54/351 (15%), Positives = 128/351 (36%), Gaps = 35/351 (9%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN ++ + L G + P+ + QAG + E + + ++ + PE L
Sbjct: 1 MNLKEN-LENALSGEDVEVKPVISVTQAG--IIEAME--QTNASWPEAHTNPEQMAILGS 55
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEG--PRMDPITTQEIYLLNPNIDLFLN 118
+ A + + V A ++G V NE + P+ L
Sbjct: 56 SLHELAGLECARIPFGLTVEAQSMGAEVNLGNNERTPEVTGTPFESADDIEAPDDFLENG 115
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++I IL++K + + +I P+T+ +++ + +
Sbjct: 116 RIPVVLEAIDILKEKYED-LPIIVGITGPFTLTGHLLG------IENVVRYMKTDPDEIE 168
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRK 236
++ D S +Y+ + DVI + + A + +F++ ++ + +
Sbjct: 169 IAMENCLDASMDYIESIQKHDADVICVNEPTASPELIDPLQFKSMIKPNLEDLADFI--- 225
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP--MR 293
+ + + G+ + + + I ++ +V + A E ++ E + GN+
Sbjct: 226 --DVQKVLHICGSTQPIISDMSSVGFDGISIEEAVDIPKAKESIEDECVIVGNISTSKTL 283
Query: 294 LVVGNQVMIDGVNAIL----DVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L + + + V +L D++ G+ P+ NV LV+
Sbjct: 284 LSGTPEDVKEDVKKVLSEDIDIIAPS-------CGLAPKTPLANVKALVEA 327
>gi|170755369|ref|YP_001781133.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|169120581|gb|ACA44417.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum B1 str. Okra]
Length = 356
Score = 95.7 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 45/348 (12%), Positives = 132/348 (37%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EDIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A V + D + + +FE + + + + + +
Sbjct: 181 TECNLAFVKAAYEEYGLVCGMGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN--Q 299
+ ++ ++ + + +D + + + + GN+DP+ ++ +
Sbjct: 241 LHICGKTKHIWSRLGKM-NISTFSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNGTLE 299
Query: 300 VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V ++ P ++ G I +N+ +++ +
Sbjct: 300 DVYDTVKLCIEKAAGSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|288932117|ref|YP_003436177.1| uroporphyrinogen decarboxylase (URO-D) [Ferroglobus placidus DSM
10642]
gi|288894365|gb|ADC65902.1| Uroporphyrinogen decarboxylase (URO-D) [Ferroglobus placidus DSM
10642]
Length = 343
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 135/355 (38%), Gaps = 29/355 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
K +LE + V P + G + I+ K+FL P+ EL ++
Sbjct: 4 KDILLEAFELGVPERVPAVIF---GGGM---WTIKNSGKDFLYYIGKPKEYAELIVKTAD 57
Query: 65 RYNFDAAIL---FSDILVIADALGRNVRFVEN---EGPRMDPITTQEIYLLNPNIDLFLN 118
D +++ L A VR + EGP ++ + +++ L +
Sbjct: 58 ILQSDMVYPGSGYNNFLAAAIGGKIKVRHIGAPDLEGPIIN--SPEDLEALEIDKIYENE 115
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L I+++ I+ ++ + + P+T A G ++ Q Y+N
Sbjct: 116 ALQTIWKASEIVYNEIGDKYLVGTTSWGPFTKA------GNLRGVEQLMRDIYKNKEFAK 169
Query: 179 WLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRR 235
+++F D+ + + AG++ + I D A + F +A + +I +++
Sbjct: 170 KVIEFAKDLIMAFYEPVVKDAGLEAVSIADPTASGDLISRRHFLEFALPPLKELIDEMKK 229
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRL 294
+ F+ L+ + ++ LD V L +A K + GN+DP+ +
Sbjct: 230 RKIAV-FLHICGDTSDKLREIAE-SKASCFSLDHKVDLGYAKSTLKSVICIAGNVDPVSV 287
Query: 295 V--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + + + N + + G ++ G I P V +N+ ++ R K+
Sbjct: 288 LNDGTPEYVEEVSNKCIHIAAEGGGYVLCPGCDIPPTVPLENIQAFIRAARKTKL 342
>gi|153933893|ref|YP_001383846.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. ATCC 19397]
gi|153937342|ref|YP_001387396.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. Hall]
gi|152929937|gb|ABS35437.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152933256|gb|ABS38755.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. Hall]
Length = 356
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/348 (13%), Positives = 133/348 (38%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGINTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A V I D + + +FE + + + + + +
Sbjct: 181 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN--Q 299
+ ++ ++ + + +D + + + + GN+DP+ ++ +
Sbjct: 241 LHICGKTKHIWSRLGKM-NISTFSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNGTLE 299
Query: 300 VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V ++ + P ++ G I +N+ +++ +
Sbjct: 300 DVYDTVKLCIEKVADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|148379469|ref|YP_001254010.1| methylcobamide:CoM methyltransferase [Clostridium botulinum A str.
ATCC 3502]
gi|148288953|emb|CAL83040.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A str. ATCC 3502]
Length = 359
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/348 (13%), Positives = 133/348 (38%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 22 KGEEVDRLPCAIM---------FEETAAVYAGINTKEYYFDADKMLEAEVFKVRELGAES 72
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 73 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 130
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 131 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 183
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A V I D + + +FE + + + + + +
Sbjct: 184 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 243
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN--Q 299
+ ++ ++ + + +D + + + + GN+DP+ ++ +
Sbjct: 244 LHICGKTKHIWSRLGKM-NISTFSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNGTLE 302
Query: 300 VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V ++ + P ++ G I +N+ +++ +
Sbjct: 303 DVYDTVKLCIEKVADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 350
>gi|226948832|ref|YP_002803923.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
gi|226844315|gb|ACO86981.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
Length = 356
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/348 (12%), Positives = 132/348 (37%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLSIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A + I D + + +FE + + + + + +
Sbjct: 181 TECNLAFVKAAYEEYGLICGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLVVGN--Q 299
+ ++ ++ + + +D + + + + GN+DP+ ++ +
Sbjct: 241 LHICGKTKHIWSRLGKM-NISTFSVDNCEDIGELKAVLGDKACIVGNVDPVSVIRNGTLE 299
Query: 300 VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ D V ++ P ++ G I +N+ +++ +
Sbjct: 300 DVYDTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|300855285|ref|YP_003780269.1| putative uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M
methyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435400|gb|ADK15167.1| putative Uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M
methyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 358
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/295 (16%), Positives = 113/295 (38%), Gaps = 28/295 (9%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENE-----GPRMDPITTQE-IYLLNPNIDLFL 117
++++ D +F+D+ A+A+G + F E+ P + I + I + NP D L
Sbjct: 60 KKFHMDGLRVFTDLYAWAEAMGCELTFPEDNTADLLKPAIKNIDDIDKIKIANPYKDGRL 119
Query: 118 NYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
P++ +++ L K+ + G P++ A +++ ++N A
Sbjct: 120 ----PVYIEAMKYLVDKVGKEVACSGGIVGPFSNAFFLVG------IENMTRLFFKNPEA 169
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVR 234
+ L + EY + G+ I I + + + FE + + +++ ++
Sbjct: 170 VHKLCELSLQTCIEYAKVVMSLGLS-ITISEPLSSCTVVSPKHFEKFCMPYLEKLVRFIQ 228
Query: 235 RKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDP 291
+ K + ++ + +D L EL + + GN+DP
Sbjct: 229 SQGKTCVLHVCGKTKKIWPYVGKLSKI-GVSGFSMDNVESLKECKEELGDKVKIMGNVDP 287
Query: 292 -MRLVVG--NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G +++ +LD S ++ G + + +N+ ++ TVR
Sbjct: 288 SNIMYGGTKKEIVNTVAKCVLDGYDSLKGYVVMSGCSLPVETPSENIQLMMDTVR 342
>gi|317477140|ref|ZP_07936381.1| methylcobamide CoM methyltransferase MtbA [Bacteroides eggerthii
1_2_48FAA]
gi|316906683|gb|EFV28396.1| methylcobamide CoM methyltransferase MtbA [Bacteroides eggerthii
1_2_48FAA]
Length = 336
Score = 95.3 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/285 (18%), Positives = 104/285 (36%), Gaps = 17/285 (5%)
Query: 64 RRYN-FDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLNYL 120
R+ A D+ V A+A G + E+E P + +T+ E L +
Sbjct: 53 ERFPQAMACTAIMDLTVEAEAFGSQLCMSEHEVPTVTGRLLTSFEEVNALQIPSLDSARV 112
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
++ + + C P+++A G + D + + Y + L
Sbjct: 113 PQYLKA--NAMAAAGINKPVFAGCIGPYSLA------GRLFDMTEIMMAIYTEPQTATLL 164
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L+ + Y A GV + + + AG L + + Y++ V +II AV+
Sbjct: 165 LEKCKEFLLSYCQAIKATGVAGVVMAEPAAGLLSDEDCFQYSSLYVKQIIEAVQDDSFAV 224
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGNLDPMRLV--VG 297
+ G+ + T + + AL++ + V GNLDP+ +
Sbjct: 225 -ILHNCGNTGHCTPAMLK-TGAKGYHFGNKADMVEALKVCPADVLVMGNLDPVGIFKMAS 282
Query: 298 NQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
+V+ +L+ S P F+ + G P+V N+ + V
Sbjct: 283 PEVVARQTEELLNRTSSYPNFVISSGCDTPPEVPFANIEAFYQAV 327
>gi|294494698|ref|YP_003541191.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
gi|292665697|gb|ADE35546.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
Length = 342
Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/342 (15%), Positives = 110/342 (32%), Gaps = 29/342 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEY-TVELTLQPI 63
++ +L VL G P+ + Q + + F ++ + EL+L
Sbjct: 6 RENLLNVLAGKEEGLIPVLSVTQTAT-----NGLMETTGAFWPQAHSSAFQMAELSLAAH 60
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDL-FLNYL 120
+A + V+A+A G + P + +++ + D+ +
Sbjct: 61 TVGGLEAISYPFCLTVLAEAAGCEIDLGTINRPPEVISHPFAEKVENPDIPADVYDRARV 120
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ LR + LI P T+ ++I + F
Sbjct: 121 PVVLETTRRLR-NFAPDVPLIAGMEGPATLVYHLIGAQDYLKWALFK------PETFKMY 173
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
+ + + Y AG DVI + DT AG L FE S + ++
Sbjct: 174 IREATCICEGYAKLLFEAGADVICLDDTVAGPETLDCLLFETLIKPSYQHLTHSI----- 228
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLD--PMRLV 295
+ G + + I ++ SV ++ A ++ + GN+ L
Sbjct: 229 EGPVVMHMCGNTTSILSSLANCGFEGISIEESVSVAEAKSQIGSRTILIGNISTTNTLLY 288
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ + + L+ I G G+ P+ N+ +
Sbjct: 289 STPEEVEEEAFKCLEEGVD---ILAPGSGLAPETPVVNIRAM 327
>gi|84489565|ref|YP_447797.1| MtaA1 [Methanosphaera stadtmanae DSM 3091]
gi|84372884|gb|ABC57154.1| MtaA1 [Methanosphaera stadtmanae DSM 3091]
Length = 339
Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 117/308 (37%), Gaps = 27/308 (8%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD---P 100
++ Y P+ +L L ++ + A + D+ A+A G + + P + P
Sbjct: 39 SWPQAHYDPKQMTKLGLSLYKQAKLENARIPFDMTSEAEAFGCKISSNSHSPPSIIEKAP 98
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
I E + P+ L I +SI +++ + P + +I P+T+A ++I
Sbjct: 99 IEYPENLDI-PSDYTNKKRLAVISESIELIKNEYP-EVPVIVGLVGPFTLAGHIIG---- 152
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEF 218
+ S +LD + D E +AG DVI I D A + F
Sbjct: 153 --IEKLVKMLNTESFTVETILDVVLDAQIELAKTYTNAGADVICIPDGSASPDLIQPEYF 210
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL- 277
Y ++ + ++ + I + +L++ + + N + ++ S+ A
Sbjct: 211 REYEKEALNELAKNIKCQS----IIHMCGQSRPILEDLLEI-NFNGLSIEESINTGEARM 265
Query: 278 ---ELQKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
+L + + GN+ + ++ + + V IL G I GI P+ +
Sbjct: 266 VKEDLSSDTVIIGNISSTQTLLNKTTNEVKEEVKEILK---HGTDILAPSCGIAPKTPLE 322
Query: 333 NVLDLVKT 340
N+ V+
Sbjct: 323 NIKAFVEA 330
>gi|189464207|ref|ZP_03012992.1| hypothetical protein BACINT_00544 [Bacteroides intestinalis DSM
17393]
gi|189437997|gb|EDV06982.1| hypothetical protein BACINT_00544 [Bacteroides intestinalis DSM
17393]
Length = 339
Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 111/296 (37%), Gaps = 21/296 (7%)
Query: 57 ELTLQPIRRYN-----FDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLL 109
E+ Q IR N A D+ V A+A G + E+E P + +T+ E
Sbjct: 45 EVHFQAIRALNERFPKAMACTAIMDLTVEAEAFGAQLCMSEHEVPMVTGRLLTSFEDVDA 104
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
L + ++ ++ + + C P+++A G + D + +
Sbjct: 105 LQIPSLDNARVPQYLKANAL--AAAGINKPVFAGCIGPYSLA------GRLFDMTEIMMA 156
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
Y + LL+ ++ Y A GV + + + AG L + + Y++ V +I
Sbjct: 157 IYTEPQTATLLLEKCTEFLLSYCQAIKATGVAGVVMAEPAAGLLSDEDCFQYSSLYVKQI 216
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK-EGPVQGN 288
I AV+ + G+ + T + + AL+ + V GN
Sbjct: 217 IEAVQDDSFAV-ILHNCGNTGHCTPAMLK-TGAKGYHFGNKADMVEALKACPADVLVMGN 274
Query: 289 LDPMRLV--VGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTV 341
LDP+ + +V++ +L+ S P F+ + G P+V N+ + V
Sbjct: 275 LDPVGIFKMALPEVVVRQTEELLNRTSSYPNFVISSGCDTPPEVPFANIEAFYQAV 330
>gi|153938287|ref|YP_001390843.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
gi|152934183|gb|ABS39681.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
Length = 356
Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/351 (14%), Positives = 129/351 (36%), Gaps = 40/351 (11%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + +E + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLEAEVFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYRDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EDIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA---VRRKYPN 239
++ + ++ A V I D + + +FE + + + + + K P+
Sbjct: 181 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
K L T +D + + + + GN DP+ ++
Sbjct: 241 LHICGKTKHIWNRLGEMNIST----FSVDNCEDIGELKAVLGDKVCIVGNADPVSVIRNG 296
Query: 299 --QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V ++ P ++ G I +N+ +++ +
Sbjct: 297 TVEDVYNTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|67008225|emb|CAH18515.1| methyltransferase/corrinoid binding protein CmuA [Rhodobacteraceae
bacterium 198]
Length = 615
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/355 (14%), Positives = 108/355 (30%), Gaps = 31/355 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ V + P+ LM R IR+ ++ E
Sbjct: 5 MTGRERLFAAVTMSETPDQVPVIPLLMT---------RAIREGGVRVDEVLLDGEAQAHA 55
Query: 59 TLQPIRRYNFDAAILFSDILVIADAL-GRNVRFVENEGPRM--DPITTQEIYLLNPNIDL 115
+ + ++ D I +D+ + + G + ++ P + P ++E +
Sbjct: 56 KKKALEKFGGDCIISGTDLFTPVECVPGCELDYLPYAQPSLVTHPTPSKEAFYRFKEKYE 115
Query: 116 FLNY------LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ L ++ + ++ L + L G P T A M + QN
Sbjct: 116 REGFQPSKRVLAIQEEARTYVKMGLKDTHVLPTPVGGPITTAQLMT---GSSEFLQN--- 169
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVG 227
+ + + + DV AG+DV I D L + +A
Sbjct: 170 LTDDPEYCHEVTELALDVVKNVCRLMFEAGIDVCNILDPFCSSDILPPEVYREHALPYQK 229
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ + F + ++ N G + + + + G
Sbjct: 230 RLFDYIHNDLKGIGFTHTCTFTQPIWRDIASNGSLNFNGDMYPGMDKAKQAIGGQISLMG 289
Query: 288 NLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
L P + + V I +G +G I G I + +N+ +++
Sbjct: 290 TLSPYSTLMHGSTDDVRKEVKKIAAEVGYNGGCIVMPGCDIDWNIPEENLHAMIQ 344
>gi|300855090|ref|YP_003780074.1| uroporphyrinogen decarboxylase [Clostridium ljungdahlii DSM 13528]
gi|300435205|gb|ADK14972.1| Uroporphyrinogen decarboxylase (URU-D) [Clostridium ljungdahlii DSM
13528]
Length = 356
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 108/306 (35%), Gaps = 31/306 (10%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--------DPITTQEIY 107
+ + R+ D I+ + + ALG + E+ P + + + ++
Sbjct: 54 AKAQIACYERFGNDLTIVEYGLHGVGSALGSEMSDPEDSVPAIVKYALEDLNDVDKLDMS 113
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
L P D L ++ I+ ++ N + P+T A+ + + +
Sbjct: 114 KLEPKNDKAFQLHL---EAARIIMDEIGNEVPTGVLISGPFTAAASI--------YKIEK 162
Query: 168 VFA--YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAA 223
+ +N + L+ F +D I AGV ++ + D A L + ++ +
Sbjct: 163 LLRATRKNPEKLHQLIKFCNDALKMICREFIKAGVLIL-LCDPIASGTILNKKQYLEFVL 221
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKE 282
++ + ++ + + + + +D V L++ + + +
Sbjct: 222 PYTQELMKEIHEAKGMV-CYHICGDTTSIVGEMVK-SGCDMMSIDNRVDLAYTKQVVGDK 279
Query: 283 GPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLV 338
P+ GN+DP + ++ + V + P +I G ++ V +N+ +
Sbjct: 280 VPILGNVDPVEVLILGNTNDVDSAVKNCMQKAYDSPCGYILASGCDLSGAVPLENIDQFM 339
Query: 339 KTVRSE 344
+ R
Sbjct: 340 ASARKY 345
>gi|256253975|ref|ZP_05459511.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 68
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 279 LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
LQ+EG VQGNLD +R+V G + +GV+AIL+ +G GP +FNLGHGITPQ +NV ++
Sbjct: 1 LQEEGAVQGNLDLLRVVAGGNALDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMI 60
Query: 339 KTVRSEK 345
VR K
Sbjct: 61 DRVRGGK 67
>gi|168182426|ref|ZP_02617090.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
gi|182674466|gb|EDT86427.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum Bf]
Length = 356
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/364 (13%), Positives = 134/364 (36%), Gaps = 43/364 (11%)
Query: 1 MNERKQKILEVL-QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVE 57
M +++ + +G ++ P +M + + + + + + ++
Sbjct: 8 MTAKERS--KAYFKGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLQ 56
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLF 116
+R ++A + + + +ALG + + + +DP+ + Y + N+++
Sbjct: 57 AEKFKVRELGAESAGINVTLRGMGEALGSKMDYPSDRASYLIDPV--LKDYKMLDNMEVV 114
Query: 117 LNY----LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAY 171
Y L I +++ ++K+L N + + P + AS + ++D +N+
Sbjct: 115 NPYSDGRLPIILKALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK---- 170
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRI 229
+ LLDF+++ + ++ A V I D + + +FE + + +
Sbjct: 171 ---EGIHKLLDFMTECNLAFIKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKT 227
Query: 230 ISA---VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPV 285
+ + K P+ K L T +D + + + +
Sbjct: 228 VDGIYKITGKKPSLHICGKTKHIWSCLGKMNIST----FSVDNCEDIGELKAVLGDKVCI 283
Query: 286 QGNLDPMRLVVGN--QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
GN+DP+ ++ + + + V ++ P ++ G I +N+ +++
Sbjct: 284 VGNVDPVSVIRNGTVEDVYNTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEAT 343
Query: 342 RSEK 345
+
Sbjct: 344 KKYS 347
>gi|310829225|ref|YP_003961582.1| hypothetical protein ELI_3663 [Eubacterium limosum KIST612]
gi|308740959|gb|ADO38619.1| hypothetical protein ELI_3663 [Eubacterium limosum KIST612]
Length = 449
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 62/352 (17%), Positives = 124/352 (35%), Gaps = 37/352 (10%)
Query: 5 KQKILEVLQGNVINPPPIWLMR--QAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
K+ +L+ L+ + P AG L Y ++ + E ++
Sbjct: 3 KELLLKTLRHEQTDNVPFVPFSGVHAG-SLKGYTA--------REVLTDGDKLYESLMEV 53
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-------DPITTQEIYLLNPNIDL 115
+ Y D + D+ + A+ LG + + E+ P + DP + +
Sbjct: 54 HKLYTPDGMPIIFDLQIEAEILGCELLWAEDNPPSVMSHPFAGDPKVPCKCKIPKKTD-- 111
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + +++ + + L G P T+AS++ F D
Sbjct: 112 --GRIPMVLDVMRRVKESVGDDTALYGLICGPVTLASHIRGSEFFMD-------IIMYPD 162
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
L+ F ++V + AG+DVI + D + E+ +R
Sbjct: 163 YVKELVAFCTEVCNAMTDYYVEAGMDVIALVDPIISQISPKSIEDLFMDQFKAAFDYIRS 222
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLDP-- 291
K A F G + + T+ + I +D +V ++ A ++ Q + GN+ P
Sbjct: 223 K--GALGCFFVCGDATIQMDVMCRTNPDGISIDENVNINEAKKITDQYNIAIGGNI-PLT 279
Query: 292 -MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
L Q + V +LD + I + G + V +N + V+ V+
Sbjct: 280 TTMLFGTQQDNMKYVVDMLDNIDHHNLIVSPGCDMPYNVPMENTIACVQAVK 331
>gi|67008218|emb|CAH18509.1| methyltransferase/corrinoid binding protein CmuA [Rhodobacteraceae
bacterium 179]
Length = 615
Score = 94.5 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/361 (14%), Positives = 109/361 (30%), Gaps = 31/361 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ V + P+ LM R IR+ ++ E
Sbjct: 5 MTSRERVFAAVTMSETPDQVPVVPLLMT---------RGIREGGVRVDEVLLDGEAQAHA 55
Query: 59 TLQPIRRYNFDAAILFSDILVIADAL-GRNVRFVENEGPRM--DPITTQEIYLLNPNIDL 115
+ + ++ D I +D+ + + G + ++ P + P ++E +
Sbjct: 56 KKKALDKFGGDCIIAGTDLFTPVECVTGCELDYLPYAQPSLVTHPTPSKEAFYRFKEKYE 115
Query: 116 FLNY------LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ L ++ + ++ L + + G P T A M + QN
Sbjct: 116 KEGFQPSKRVLAIQEEARTYVKLGLKDTHAIPTPVGGPITTAQLMT---GSSEFLQN--- 169
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVG 227
+ + + + DV AG+DV I D L + +
Sbjct: 170 LTDDPEYCHEVTELALDVVKNVCRMMFEAGIDVCNILDPFCSSDILPPEVYREHGLPYQK 229
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ + F + ++ N G + + + + G
Sbjct: 230 RLFDYIHNDLKGIGFTHTCTFTQPIWRDIAGNGSLNFNGDMYPGMDKTKQAIGGQISLMG 289
Query: 288 NLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
L P + + + V I +G +G I G I + +N+ ++K
Sbjct: 290 TLSPYSTLMHGSTDDVRNEVKKIAAEVGYNGGCIVMPGCDIDWNIPEENLHAMIKQCSEI 349
Query: 345 K 345
K
Sbjct: 350 K 350
>gi|237794835|ref|YP_002862387.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
gi|229262946|gb|ACQ53979.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
Length = 356
Score = 94.1 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/351 (13%), Positives = 129/351 (36%), Gaps = 40/351 (11%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + ++ +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLQAEKFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+++ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMDYPSDRASYLIDPV--LKDYKMLDNMEVVNPYSDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISA---VRRKYPN 239
++ + ++ A V I D + + +FE + + + + + K P+
Sbjct: 181 TECNLAFIKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTVDGIYKITGKKPS 240
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN 298
K L T +D + + + + GN+DP+ ++
Sbjct: 241 LHICGKTKHIWSCLGKMNIST----FSVDNCEDIGELKAVLGDKVCIVGNVDPVSVIRNG 296
Query: 299 --QVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + + V ++ P ++ G I +N+ +++ +
Sbjct: 297 TVEDVYNTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|207111140|ref|ZP_03245302.1| uroporphyrinogen decarboxylase [Helicobacter pylori HPKX_438_CA4C1]
Length = 64
Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ +QGNL+P RL + +GV IL V+G+ IFNLGHG+ P + +N LV+
Sbjct: 1 GKYVLQGNLEPTRLY-DKSALEEGVERILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQL 59
Query: 341 VRSE 344
V ++
Sbjct: 60 VHAK 63
>gi|153855878|ref|ZP_01996853.1| hypothetical protein DORLON_02878 [Dorea longicatena DSM 13814]
gi|149751846|gb|EDM61777.1| hypothetical protein DORLON_02878 [Dorea longicatena DSM 13814]
Length = 353
Score = 93.8 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/360 (13%), Positives = 118/360 (32%), Gaps = 44/360 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL------MRQAGRYLPEYRQIRKKFKNFLDMCYTPEY 54
M +++ + G ++ PI L M Y + + + + ++
Sbjct: 7 MTPKERAF-ALFAGKPVDRMPIKLFSPYIGMNFGASYQDAFVEAKSRAHWLIES------ 59
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALG-------RNVRFVENEGPRMDPITTQEIY 107
+R+ D + I I A G + ++ ++ I +
Sbjct: 60 --------YKRFGQDGLSVNYRIDGIPVAFGAASTYDAFGIPIIKES--VLENIGNVDQL 109
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
L + F ++ ++ +L + I P+T A+ + +
Sbjct: 110 DLEKLRFENDHNAQVAFDAVRYIQDELNDEIFTGVGLMGPFTTAANLAGT------EKIL 163
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVG 227
++ + LLDF +D + E + + I + + A L +F +
Sbjct: 164 RAMRKDKENLHKLLDFAADATIEVGRKFVENKI-GIGLAEPTASLLSPKQFREFVIPYYV 222
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
+++ + + +L+ + + I +D SV +++A E + + +
Sbjct: 223 KVMDKWKEWGSHGSGFHICGDTTKLLETFPEM-GIRGISIDSSVDIAYAKETVGDKLSIM 281
Query: 287 GNLDPMRLVVG-NQVMIDGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+ PM ++ G + + V P I G I +N+ ++ R
Sbjct: 282 GNVSPMEILNGTPESIEQAVIDCFRKCWDNPRGFTIA-PGCDIPVTTSLENIDAYMRAAR 340
>gi|325290640|ref|YP_004266821.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966041|gb|ADY56820.1| Uroporphyrinogen decarboxylase (URO-D) [Syntrophobotulus glycolicus
DSM 8271]
Length = 337
Score = 93.4 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/359 (16%), Positives = 124/359 (34%), Gaps = 48/359 (13%)
Query: 5 KQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
K+++ ++ I+ P+ +M A + + ++ L ++ +
Sbjct: 7 KERLFRTIKRKSIDRKPVICPGGMMNAAV------VDVMRDSESVLPAAHSDALLMSALA 60
Query: 61 QPIRRY-NFDAAILFSDILVIADALGRNVRFVENEG-PRMDPITTQEIYLLNPNIDLFLN 118
Q + F+ + + + + LG + F E P++ L P++
Sbjct: 61 QRVASLTGFENIGVPFCMTIEPEILGAEIDFGTLECEPKI-------ARELFPSVSAVEY 113
Query: 119 YLLPIF------QSISILRKKL-PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+P ++I+ L + LI P + A+ ++ D
Sbjct: 114 RDIPALLEKGRVETIANAAAALSGGDLPLICSLTGPISTAASIV------DPMTFLKELR 167
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRI 229
+ + +LD+++D Y + + +G D+I I D A LG F +A R + ++
Sbjct: 168 KKPSEAHRVLDYVTDFLIAYALTLLESGADIISIADPTATGEILGPKMFSEFAVRYINKL 227
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNL 289
AV+ + I G +K Y ++ I D V L E + GNL
Sbjct: 228 TEAVQAA--DRSVILHICGNMNSVKQYLPEFYADVISTDAMVNLRGLKEEYPDLLTMGNL 285
Query: 290 DPMRLVVG-NQVMIDGVNAI----LDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L G + + + +D++ G++ N+ V+S
Sbjct: 286 STYLLESGKKEAIEARTEHLIKSNIDIIAPA-------CGLSTSSPMDNLQAFTGAVKS 337
>gi|332983242|ref|YP_004464683.1| Uroporphyrinogen decarboxylase [Mahella australiensis 50-1 BON]
gi|332700920|gb|AEE97861.1| Uroporphyrinogen decarboxylase (URO-D) [Mahella australiensis 50-1
BON]
Length = 339
Score = 93.0 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 113/311 (36%), Gaps = 23/311 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRN--VRFVENEGPRMDPITTQ 104
+ C + ++ Y+ D + SD + V++ ++ P +D
Sbjct: 39 EYCKDGLKMAQAQMKTAVDYDLDVLLACSDPARELIDIAGEDSVKWFYDQPPAIDEERAA 98
Query: 105 EIYLLN------PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
P+ + +I +++++ + ++++G+ P +A+ +
Sbjct: 99 LSNKSRLKEFKIPDPWNK-GRMNDRIIAIQKMKEEMGDRLSIVGWVEGPLALAAEL---- 153
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEF 218
+ + + L DF + + Y AQ+ AG + I + D A +G +
Sbjct: 154 --RGINNIMIDFIDDPDFVLELFDFTARTAMVYAKAQVEAGANTIGMSDAAASLIGPALY 211
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE 278
E + + ++SA++ +Y + ++ + L + LD+ V L A +
Sbjct: 212 EKFLWPAQRMVLSAIK-EYGAISRLHMCGNTNDLIVKMKELP-VDIYELDFPVDLETARQ 269
Query: 279 -LQKEGPVQGN---LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
L + + GN +D L + V G I G ++P+ P+N+
Sbjct: 270 ILGPDRVILGNVSTID-DLLNGTPDDVHKAAAYCHKVCGRY-HIVGAGCEVSPRTPPENL 327
Query: 335 LDLVKTVRSEK 345
+++ K
Sbjct: 328 RAMMRYALEHK 338
>gi|187779853|ref|ZP_02996326.1| hypothetical protein CLOSPO_03449 [Clostridium sporogenes ATCC
15579]
gi|187773478|gb|EDU37280.1| hypothetical protein CLOSPO_03449 [Clostridium sporogenes ATCC
15579]
Length = 356
Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/348 (13%), Positives = 134/348 (38%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + ++ + +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLQAEIFKVRDLGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+++ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMEVVNPYKDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N + + P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVNIGSGVSGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A V I D + + +FE + + + I + +
Sbjct: 181 TECNLAFIKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTIDGIYKITGKKPS 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN--Q 299
+ ++ N R+ + + +D + ++ + + GN+DP+ ++ +
Sbjct: 241 LHICGKTKHIWDNLSRM-NISTFSVDNCEDIGKLKDVLGDKVCIVGNVDPVSVIRNGTVE 299
Query: 300 VMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ++ P ++ G I +N+ +++ +
Sbjct: 300 DVYNTVKLCIEKAADSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|218780760|ref|YP_002432078.1| cobalamin B12-binding domain protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762144|gb|ACL04610.1| cobalamin B12-binding domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 545
Score = 93.0 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 112/299 (37%), Gaps = 21/299 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQE 105
++ + + E + + + D FSDI++ A+A+G + F P + P + E
Sbjct: 35 EILWDADLKFEALKRYYQNLDADVLFYFSDIVIQAEAMGAEIAFSNGGMPAVKSPARSIE 94
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+ + + + +S ++++ + P+TVA ++ +
Sbjct: 95 VPKP-----GHVARMQINARVVSRMQQEFSGKF-IAAPVFGPFTVAGQVVGEEALL---- 144
Query: 166 NRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
+ A LL+ +++ Y + AG +V+ + D + + +F YA
Sbjct: 145 --RMLIDDRAAVMDLLEQALELAGNYTQFLLDAGANVVSVADPLSALIPPDQFWEYAGDF 202
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-LSFALELQKEGP 284
+ R+ I G + + T + D + L+F ++ +
Sbjct: 203 LQRLFDPFNA----LPTILHICGDTGQVVDQMVKTGVGGVSFDNCMDLLAFEDQIPDDVS 258
Query: 285 VQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+DP+ +V + + ++ ++ F+ + G + +NV V+T
Sbjct: 259 IIGNIDPVGIVERGSLEDIASETADLVSMMALKKNFVLSTGCAVPFSASLENVRHFVET 317
>gi|20091005|ref|NP_617080.1| methylcobalamin:coenzyme M methyltransferase [Methanosarcina
acetivorans C2A]
gi|19916093|gb|AAM05560.1| methylcobamide:CoM methyltransferase isozyme M [Methanosarcina
acetivorans C2A]
Length = 344
Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 61/363 (16%), Positives = 120/363 (33%), Gaps = 51/363 (14%)
Query: 1 MNERKQK--ILEVLQGNVINPPPI---------WLMRQAGRYLPEYRQIRKKFKNFLDMC 49
M + + IL L+G + P+ LM +G PE
Sbjct: 1 MEKPNFRTEILRTLEGETPSQIPVGTFTTAPVLELMDMSGAARPE-------------AD 47
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRF-VENEGPRM--DPITTQEI 106
PE L +F+ D++V+ +ALG V + + P + P+ +
Sbjct: 48 RQPEKMALLAFSQYVNASFETLRYPFDMVVLGEALGCRVDPGTKAKTPAVLNGPMELSPV 107
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
P L + + ++ ILR+K +++ LI P +A+ + +
Sbjct: 108 VPKLPEDLLERGRIPAVLKATEILREKAGSNLPLIVGMEGPADLAASLCG------ITRF 161
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAAR 224
+ + L+D SD Y + +G D+I I D + + F
Sbjct: 162 LKWTIKRPHIVTRLIDLCSDACIMYARECLKSGADIIVIADAVSSPDMISPDAFRTLIKP 221
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-----DWSVPLSFALEL 279
+ R+ A+ + A ++ + + + L + + + A E
Sbjct: 222 GMARVPKAL---GGGKSVLHICGAADPIIADMAE-CGFDGLSLEEGVKNLRIAVETAHES 277
Query: 280 QKEGPVQGNLDPMR--LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
V G++ R + + ++ I G GI P+ +N+ L
Sbjct: 278 G--VAVIGSVSTSRTLFRGSPEDVKKEAFTCMESGVD---ILAPGCGIAPETPLRNLKAL 332
Query: 338 VKT 340
V+
Sbjct: 333 VEA 335
>gi|170760906|ref|YP_001785627.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|169407895|gb|ACA56306.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
Length = 375
Score = 92.6 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 94/247 (38%), Gaps = 18/247 (7%)
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
E L+ + +Y + + K N G C P T+AS +I
Sbjct: 65 EDDLVQVKEKKYFDYSYFDRELKQLKDAKKNNDKLFGGGCFGPLTIASDIIG------IA 118
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAAR 224
+ +N + ++ ++++ E + G D I + A + FE ++
Sbjct: 119 ECTKMCIKNPKLLKGIVKYINNYIIELAKKEESEGADFFWIAEPVASLFSPNAFEMFSGN 178
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQK- 281
+ I Y N F G LK+ +L T + + +D+ V + + +
Sbjct: 179 FINEI-------YSNISIPGFLHVCGKTLKHTDKLVKTGAQVLSIDYVVDIRKTIRVVPE 231
Query: 282 EGPVQGNLDPMRLVVG-NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVK 339
+ + GN++P+ L+ G + + VN + L + FI + G I +NV ++K
Sbjct: 232 DIVIMGNVNPIMLLSGTKEEIAKEVNELNKDLRNYKNFILSSGCLIPQGTPSENVELMIK 291
Query: 340 TVRSEKI 346
+ K+
Sbjct: 292 LTKDFKL 298
>gi|294495575|ref|YP_003542068.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
gi|292666574|gb|ADE36423.1| methyltransferase MtaA/CmuA family [Methanohalophilus mahii DSM
5219]
Length = 338
Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/353 (16%), Positives = 125/353 (35%), Gaps = 39/353 (11%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMC--------YTPEY 54
++KQ+I+ L+ ++ P AG + +D C + PE
Sbjct: 2 QQKQRIINALERKPVDKIP------AGLF------TTAAPLEIMDSCGVARPEADFDPEK 49
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPN 112
EL + F+ D+ +A++ G + + P ++ + + P
Sbjct: 50 MAELAIATQSIPGFETIRYPFDLTALAESFGCKIHRGSKDIPPAVLEGLEINIEDIEVPE 109
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ + I ++ I+++++ + + LI P +A ++ + +
Sbjct: 110 DLMQKGRMPAILEATHIIKRQVGDEVPLICGFAGPVDLAVNLMG------MKPFLLKILK 163
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRII 230
L++ + + + AG DVI + + F++ ++
Sbjct: 164 EPHKLERLMEVTTRACIKAANESLKAGADVICFGEAVVSPDIIPPAMFKSVIKPHYKQLA 223
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-PLSFALELQKEG--PVQG 287
+V K I A ++K+ I ++ SV L +A+++ EG + G
Sbjct: 224 DSVNGKC----VIHVCGKADPIIKDIAE-CGFCGISVEESVEDLQYAIKMAHEGGAALIG 278
Query: 288 NLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
N+ + A L L +G I G GI PQ KN+ L +T
Sbjct: 279 NVSTSVTIYNKTAEEVKAEA-LKCLEAGVDILAPGCGIAPQSPIKNMQALAQT 330
>gi|111074969|gb|ABH04830.1| MtaA/CmuA family methyltransferase [Heliobacillus mobilis]
Length = 331
Score = 92.2 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 72/356 (20%), Positives = 130/356 (36%), Gaps = 46/356 (12%)
Query: 8 ILEVLQGNVINPPPIW----LMRQA--------GRYLPEYRQIRKKFKNFLDMCYTPEYT 55
+L VL I+ P+ +M A G LPE +
Sbjct: 1 MLRVLDKEKIDRAPVVCPGGMMNAAIVEVMNRTGHTLPEAH-------------HDDTLM 47
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMD---PITTQEIYLLNP 111
EL F+ + + V A+ LG + P++ + ++ P
Sbjct: 48 AELAFDVADYTGFENIGIPFCMTVEAEVLGSGIDVGTLACEPKIRQEAYPSVSQVEFKEP 107
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIKDHGQNRVFA 170
L + + Q+ L +K P+ +IG P + A+ ++ F+K+ +++
Sbjct: 108 QALLRSGRINTVVQAAYRLARKHPD-YPIIGNLTGPISTAASIVDPMSFLKELRKDK--- 163
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGR 228
+ ++D++S+V Y + AGV VI I D A LG FE YA + +
Sbjct: 164 ----ENAHRVIDYVSNVLIAYAQLMVDAGVKVISIGDPTATGEILGPKMFEEYAVPYLNK 219
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+I + +A I G +++ L +AI D V L E + GN
Sbjct: 220 VIDGIHEL--DAAVIVHICGKMQSVRHMIPLIKGDAISTDAMVNLKRLKEDYPQLTTMGN 277
Query: 289 LDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L L GN + + ++ G G I G++ + + + +TV+
Sbjct: 278 LSTYLLEGGNYEDVSRHTRRLV---GDGIDIIAPACGLSTSTTIQALQAMTQTVKE 330
>gi|317484933|ref|ZP_07943820.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316923809|gb|EFV45008.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 330
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 35/296 (11%)
Query: 5 KQKILEVLQGNVINPPPIWL-MRQAGRYLPEYRQIRKKFKNFL------DMCYTPEYTVE 57
K+ + + L+ P W+ M AG FL ++ + VE
Sbjct: 23 KEVLFKTLRHEETER-PAWVPM--AG-----------VHAGFLKGYTADEVYQDADKLVE 68
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYLLNPNIDL 115
L+ + Y D IL D+ + A+ LG +++ +N P + P+ + + + I
Sbjct: 69 SLLEVEKMYAPDGLILLFDLQLEAEILGCTIKWEKNGPPSVRSHPLESTF-EIPDIKITR 127
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + ++K + + L G P+T+AS++ F +D A Q+
Sbjct: 128 DSGRIPLVLDVTRRIKKAVGDRTALYGLFCGPYTLASHLRGTNFFRD-------ARQHPE 180
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
L+ + +++ + + GVDVI D + F+N+ +I +R
Sbjct: 181 YVKELMAYTTELGLQMADFYLEEGVDVIVPVDPVVSQISPTHFKNFVFEPYAKIFRHIRN 240
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGNL 289
K A F G + T +++ +D +V + A +L + + GN+
Sbjct: 241 K--GAFSSFFVCGNATHILELMCQTKPDSLAVDENVNIVAAHKLTDSYDVAIGGNI 294
>gi|84489010|ref|YP_447242.1| MtaA4 [Methanosphaera stadtmanae DSM 3091]
gi|84372329|gb|ABC56599.1| MtaA4 [Methanosphaera stadtmanae DSM 3091]
Length = 337
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/349 (16%), Positives = 127/349 (36%), Gaps = 36/349 (10%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK----NFLDMCYTPEYTVELTLQ 61
+ + L G + P A + + F ++ + E L +
Sbjct: 5 ENLKAALNGEEVEKVPAISATAA--------AVEEAFPAANVSWPEAHKDAEQMARLGIS 56
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRM--DPITTQEIYLLNPNIDLFLN 118
+ + A + D+ A+A G V + E P + I L P+ +
Sbjct: 57 LHEQAGLECARVPFDLTAEAEAFGCEVDLGDMENTPTLRSHDIVDDVEDLEVPDDFVNNG 116
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L I +SI IL+ + P + +I P+T+ +++ + + F ++ A
Sbjct: 117 RLPVILESIEILKNEYP-EVPVIVGMAGPFTLTGHLLGVEDLVKMLKTDSFVVED--AVE 173
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRK 236
L+ +++ + +GVDVI + D + L ++F +A ++ + + + +
Sbjct: 174 IALEAQTELVQAFN----ESGVDVIAVADPTSSPELLDPNDFSEFAQPALEDLSAEMETE 229
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL----QKEGPVQGNLDPM 292
+ + +L+ + I ++ +V ++ A ++ E + GN+
Sbjct: 230 S----ILHICGNSRPILEEMLD-CGFSGISVEEAVDMTEAQQVRAETGAETVMVGNVSTS 284
Query: 293 RLVVGNQVMIDGVN-AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + V + V + L G + GI P+ N+ V+
Sbjct: 285 QTLFSKPV--EEVKAEVTQALEKGVNVLAPSCGIAPKSPLANLKAFVEA 331
>gi|260655896|ref|ZP_05861365.1| uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33 E1]
gi|260629512|gb|EEX47706.1| uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33 E1]
Length = 316
Score = 91.8 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 111/277 (40%), Gaps = 18/277 (6%)
Query: 37 QIRKKFK-NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV-ENE 94
++ KK+ ++ D Y E L + FD + + V A+++G ++
Sbjct: 8 ELMKKYDIHWPDAHYDGEQMAGLAKAVVEEGLFDNYGVPFCMSVEAESMGAEADMGCDSY 67
Query: 95 GPRMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
P + P+ + + ++ + ++ +L+ + I ++G P ++A+
Sbjct: 68 EPHIKKCPMKSVDDLAALRPMNFNEGRAKAVIDAVKLLK---NDEIPVVGNVPGPVSIAT 124
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--A 210
++ + + + ++ A + LL F+++ + + + Q+ AG D+I I D
Sbjct: 125 SLM--APSRFYVALK----RSPEAAHRLLTFVTEQAGRFALEQVRAGADIITIADPSGTG 178
Query: 211 GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
LG F+ Y + + +I +R N I G M+ + + +++A D
Sbjct: 179 EILGPAYFKEYMVKYLNMMIGMIRTDR-NVPVIVHICGQMNMVFDELKEVNASAFSFDAV 237
Query: 271 VPLSFALELQKEGPVQGNLDPMRL-VVGNQVMIDGVN 306
V L A E + P+ GN+ + + +
Sbjct: 238 VSLKAAKEHIGK-PMMGNISTYAIELSSPSRVRSMAK 273
>gi|254443348|ref|ZP_05056824.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
gi|198257656|gb|EDY81964.1| Uroporphyrinogen decarboxylase superfamily [Verrucomicrobiae
bacterium DG1235]
Length = 348
Score = 91.4 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/362 (15%), Positives = 131/362 (36%), Gaps = 41/362 (11%)
Query: 3 ERKQKILEVLQGNVINPPPI-------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
E+ + +G ++ P+ W+ P Y ++ +D PE
Sbjct: 4 EQWETFKRAARGEKMDEIPMAMIVDSPWI--------PGYYGLKH-----MDYYLDPELW 50
Query: 56 VELTLQPIRRYNFDAAILFSDIL-----VIADALGRNVRFVENEGPRMDPITTQEIYLLN 110
+ L+ + D + S + ALG ++F ++ P + T + ++
Sbjct: 51 FQTNLKLHEEF-PDIIFIPSWWMEYGMAAEPSALGSKIKFWQDNTPS-EYHTLYHLEDID 108
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+ + + ++ +R I G+ T + + GF++ + +
Sbjct: 109 KMPEYEVENDAFMAMTLHRIRMH-QQRILDAGYITPIVTSRGPLCTAGFVRGTTEFMIDI 167
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ---IFDTHAGCLGEHEFENYAARSVG 227
+N + L+D +++ ++L AQ A D ++ I D G + E ++ +A +
Sbjct: 168 VENPVWAHKLIDLCTNLIIDWLNAQQKAMGDCVEGLFILDDIVGFVNEEHYKEFAHPYLK 227
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL---ELQKEGP 284
RI A + + K L++ T N L+W A +
Sbjct: 228 RICDAFPKDF--IKIYHNDASIEACLEHLPD-TGFNV--LNWGKQTEIADVKERIGDRMV 282
Query: 285 VQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ GN++P + + + + D +L+ I ++G G +P + +N ++ +
Sbjct: 283 LMGNVNPLEIAVRGDAEEVFDATLEVLEDSEGENIILSVGGGTSPGMPKENFQAMLDALN 342
Query: 343 SE 344
Sbjct: 343 EY 344
>gi|302874135|ref|YP_003842768.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium cellulovorans
743B]
gi|307689606|ref|ZP_07632052.1| methylcobalamin:coenzyme M methyltransferase [Clostridium
cellulovorans 743B]
gi|302576992|gb|ADL51004.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium cellulovorans
743B]
Length = 340
Score = 90.3 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 67/365 (18%), Positives = 133/365 (36%), Gaps = 58/365 (15%)
Query: 5 KQKILEVLQGNVINPPPI------------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP 52
K+++ VL ++ PP+ +M++ G LP +
Sbjct: 7 KERLKRVLNKEKVDRPPVICPGGMMNAAIVEVMQKTGNTLPAAHS---------EESLMT 57
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMD---PITTQEIYL 108
+ + ++ F+ + + V A+ LG + F E P++ + ++
Sbjct: 58 DLSADIQ----SNTGFENFGIPFCMTVEAEVLGSPIDFGTLECEPKIQREIFSSVSKVEY 113
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI-SGGFIKDHGQNR 167
+ L + I Q+ L KK + + +IG P + A+ ++ F+K+ +++
Sbjct: 114 RKIDAMLRSGRVDTIIQTGYKLSKK-NSDVPVIGSLTGPISTAASIVDPMTFLKELRKDK 172
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARS 225
+ +D++++ EY I GV+VI I D A LG FE YA
Sbjct: 173 -------NNAHKTIDYITNFLIEYAKLMIDNGVNVISIADPTATGEILGPKVFEEYALAY 225
Query: 226 VGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
+ +I+ +V +++ R +NAI D V L
Sbjct: 226 LNKIVDSVHEAGAQAIIHICGKMDSVNHLIPKMR----ANAISTDAFVNLRDLKGQYSSI 281
Query: 284 PVQGNLDPMRL-VVGNQVMIDGVNAIL----DVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
GNL L ++ + + N +L D++ G++ N+L +
Sbjct: 282 TTMGNLSTFALEFGDDKKVSELTNKLLRDEIDIIAPA-------CGLSTSTSLNNILAMT 334
Query: 339 KTVRS 343
TV+
Sbjct: 335 NTVKE 339
>gi|37515368|emb|CAE48300.1| methylcobalamin:coenzyme M methyltransferase [Methanosphaera
stadtmanae DSM 3091]
Length = 338
Score = 90.3 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 56/349 (16%), Positives = 126/349 (36%), Gaps = 36/349 (10%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK----NFLDMCYTPEYTVELTLQ 61
+ + L G + P A + + F ++ + E L +
Sbjct: 5 ENLKAALNGEEVEKVPAISATAA--------AVEEAFPAANVSWPEAHKDAEQMARLGIS 56
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRM--DPITTQEIYLLNPNIDLFLN 118
+ + A + D+ A+A G V + E P + I L P+ +
Sbjct: 57 LHEQAGLECARVPFDLTAEAEAFGCEVDLGDMENTPTLRSHDIVDDVEDLEVPDDFVNNG 116
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L I +SI IL+ + P + +I P T+ +++ + + F ++ A
Sbjct: 117 RLPVILESIEILKNEYP-EVPVIVGMAGPSTLTGHLLGVEDLVKMLKTDSFVVED--AVE 173
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRK 236
L+ +++ + +GVDVI + D + L ++F +A ++ + + + +
Sbjct: 174 IALEAQTELVQAFN----ESGVDVIAVADPTSSPELLDPNDFSEFAQPALEDLSAEMETE 229
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL----QKEGPVQGNLDPM 292
+ + +L+ + I ++ +V ++ A ++ E + GN+
Sbjct: 230 S----ILHICGNSRPILEEMLD-CGFSGISVEEAVDMTEAQQVRAETGAETVMVGNVSTS 284
Query: 293 RLVVGNQVMIDGVN-AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ + V + V + L G + GI P+ N+ V+
Sbjct: 285 QTLFSKPV--EEVKAEVTQALEKGVNVLAPSCGIAPKSPLANLKAFVEA 331
>gi|170761452|ref|YP_001786919.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|169408441|gb|ACA56852.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 356
Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 45/348 (12%), Positives = 132/348 (37%), Gaps = 34/348 (9%)
Query: 13 QGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF--LDMCYTPEYTVELTLQPIRRYNFDA 70
+G ++ P +M + + + + + + ++ +R ++
Sbjct: 19 KGEEVDRLPCAIM---------FEETAAVYAGISTKEYYFDADKMLQAEKFKVRELGAES 69
Query: 71 AILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNY----LLPIFQ 125
A + + + +ALG + + + +DP+ + Y + N+D+ Y L I +
Sbjct: 70 AGINVTLRGMGEALGSKMGYPSDRASYLIDPV--LKDYKMLDNMDVVNPYKDGRLPIILK 127
Query: 126 SISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
++ ++K+L N +++ P + AS + ++D +N+ + LLDF+
Sbjct: 128 ALGKIKKELGNEVSIGSGISGPISAASAVRGTNNLMRDFVKNK-------EGIHKLLDFM 180
Query: 185 SDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
++ + ++ A V I D + + +FE + + + I + +
Sbjct: 181 TECNLAFVKAAYEEYGLVCGIGDPLSCGNLISGKQFEKFVEPYLRKTIDGIYKITGKKPS 240
Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGN--Q 299
+ ++ N + + + +D + ++ + + GN+DP+ ++ +
Sbjct: 241 LHICGKTKHIWDNLGEM-NISTFSVDNCEDIGELKDVLGNKVCIVGNVDPVSIIRNGTVE 299
Query: 300 VMIDGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V ++ ++ G I +N+ +++ +
Sbjct: 300 DVYNTVKLCIEKSVDSPKGYVVGSGCDIPGGAPVENIKAMIEATKKYS 347
>gi|255525345|ref|ZP_05392284.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296187954|ref|ZP_06856346.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
gi|255510916|gb|EET87217.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium carboxidivorans
P7]
gi|296047080|gb|EFG86522.1| methyltransferase, MtaA/CmuA family [Clostridium carboxidivorans
P7]
Length = 356
Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/301 (13%), Positives = 106/301 (35%), Gaps = 21/301 (6%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
+ + R+ D I+ + + ALG + E+ P + +++ ++
Sbjct: 54 AKAQIACYERFGNDLTIVEYGLHGVGAALGSQMSDPEDSVPAIMKYVLEDLNDVDKLDMS 113
Query: 116 FLN-----YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
L ++ I+ +K+ N + P+T A+ + K R
Sbjct: 114 KLELKNDKAFQLHLEAARIIMEKIGNEVPTGVLISGPFTAAASI-----YKTENLLRA-T 167
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGR 228
+N + L+ F +D I AG+ ++ + D A L + ++ +
Sbjct: 168 RKNPEKLHQLIKFCNDALKMICREFIKAGILIL-LCDPIASGTILNKKQYLEFVLPYTQE 226
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQG 287
++ + ++ + + + + +D V L++ + + + P+ G
Sbjct: 227 LMKEIHEAKGMV-CYHICGDTTSIVGEMVK-SGCDMMSIDNRVDLAYTKQVVGDKVPILG 284
Query: 288 NLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
N+DP + ++ + V + P +I G ++ V +N+ + + R
Sbjct: 285 NVDPVEVLILGNTNDVDSAVKNCMQKAYDSPCGYILASGCDLSGAVPLENIDQFMASARK 344
Query: 344 E 344
Sbjct: 345 Y 345
>gi|91772957|ref|YP_565649.1| uroporphyrinogen decarboxylase [Methanococcoides burtonii DSM 6242]
gi|91711972|gb|ABE51899.1| Methylcobamide:CoM methyltransferase [Methanococcoides burtonii DSM
6242]
Length = 348
Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 65/355 (18%), Positives = 126/355 (35%), Gaps = 31/355 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M +++L L + P +L P ++ + + T E VE L
Sbjct: 7 MTSM-ERVLTTLGQEEPDRVPYFLF-------PNMHGAKELGMSIKEYFSTSENVVEGQL 58
Query: 61 QPIRRYNFDAAILFSDILVIADALG-RNVRFVENEG----PRMDPITTQEIYLLNPNIDL 115
+ +Y D F + +A G + + + P + I ++I L
Sbjct: 59 RLREKYGHDCYTPFCYASLEIEAWGGSTIFYEDGPANAGAPFIKNI--EDIESLEAPSVW 116
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
LL + ++ +L++ + +IG +P++ + + GF K Y+N
Sbjct: 117 DSPQLLKVLKTTEMLKEHAGEDVPIIGVVISPFS--APPMQLGFSKYFDI----MYENRE 170
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL--GEHEFENYAARSVGRIISAV 233
F+ L++ +D E+ AQI AG +I FD + L + ++ +I V
Sbjct: 171 LFDKLMEVNTDFCIEWSNAQIEAGATIICYFDPISSPLLVPKELYKE--TGY--KIEKNV 226
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM 292
+ A G + + + + L+ + V GNL+ +
Sbjct: 227 ISNLNGPTAVHLASGTALPIIDDIADAGAAVVCTSAMEDLAEVKAACKGRMSVLGNLNGI 286
Query: 293 RLVVGN-QVMIDGVNA-ILDVLGSGPFIFNLGHGITP-QVDPKNVLDLVKTVRSE 344
+ + + V I G FI + HG P QV + ++ + VR
Sbjct: 287 EMRNWTAETAENKVKEAIDKAAKGGGFILSDNHGEIPYQVPDEVLIAISNAVRKY 341
>gi|284518807|gb|ADB92524.1| putative methyltransferase [Desulfotignum phosphitoxidans]
Length = 364
Score = 89.5 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 63/357 (17%), Positives = 123/357 (34%), Gaps = 41/357 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIW----LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M R Q++L L+ ++ P+ +M AG L Y +++K ++ D+
Sbjct: 22 MTPR-QRLLCALRAEAVDRVPVIIPGGMM--AG-SL--YALLQQKSVSYPDLHTRATVMA 75
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-EGPRMDPITTQEIYLLNPNIDL 115
D + + + A+ G + + + PR+ + + +
Sbjct: 76 GYARLLQETCELDNYGVPFCMTIEAEDFGARIDLGDPLKEPRVAHYPAATLDAVLAREPV 135
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++I L + + +IG P ++ + + D +
Sbjct: 136 PCRRHEITLEAIYRLA---GSTVPVIGNVIGPISLLT------SLADPAIVYRALATDGM 186
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT--HAGCLGEHEFENYAARSVGRIISAV 233
LD L+ A + QI AG +VI + D +G F+ AA ++ +II AV
Sbjct: 187 KIAATLDHLTRHIAFFAEEQIKAGAEVIVLADPGASGEIIGGEYFKTLAAPAINQIIRAV 246
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMR 293
R + + G L +A+ +D V L + GN+
Sbjct: 247 RGR--GIPAVLHICGNIMALAGALAPIPWDALSVDSVVSLKKLKPFFPGRALMGNVSTHL 304
Query: 294 L-VVGNQVMID------GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
L V G+ + V+AIL G++ P+N+ +V+ +
Sbjct: 305 LAVSGHDRITRAAIHAAEVSAILAPA----------CGLSTTTLPENIRSMVRAAQG 351
>gi|226328702|ref|ZP_03804220.1| hypothetical protein PROPEN_02597 [Proteus penneri ATCC 35198]
gi|225201888|gb|EEG84242.1| hypothetical protein PROPEN_02597 [Proteus penneri ATCC 35198]
Length = 99
Score = 89.1 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 84 LGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG 142
+G + F EGPR PI + P D + L + ++ +R L + LIG
Sbjct: 1 MGLGLYFETGEGPRFKSPIKSLADIQKLPIPDPE-DELGYVMNAVRAIRHALQGSVPLIG 59
Query: 143 FCGAPWTVASYMISGGFIKDHGQNRV 168
F G+PWT+A+YM+ GG K + +
Sbjct: 60 FSGSPWTLATYMVEGGSSKAFTKIKK 85
>gi|84488942|ref|YP_447174.1| MtaA2 [Methanosphaera stadtmanae DSM 3091]
gi|84372261|gb|ABC56531.1| MtaA2 [Methanosphaera stadtmanae DSM 3091]
Length = 339
Score = 89.1 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 59/352 (16%), Positives = 128/352 (36%), Gaps = 32/352 (9%)
Query: 1 MN-ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN + + +VL G + P+ + Q+G + + ++ PE L
Sbjct: 1 MNINYTKNLRDVLNGKKTDIAPVVTVTQSG----ILDAMERTGTSWPQAHENPEQMATLG 56
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFV-ENEGPRM--DPITTQEIYLLNPNIDLF 116
+ A + + V A+++G V P + P E + P+
Sbjct: 57 ASLYELARLEDAKIPFCLAVEAESMGCEVDLGYGGRTPEVVKSPFEKPEDIEI-PDNFET 115
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ I +++ IL + +++ + P+TVA ++I I +FA +++
Sbjct: 116 SGRIPVICEAVEIL-HERYDNLPVCVGITGPFTVAGHLIGVEDILKMINLDLFAVEDA-- 172
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVR 234
++ ++ + Y+ +VI + D + L +F + ++ I ++
Sbjct: 173 ----IEIAAEAVSAYIKQLNEVKPEVICVADPTSSGDLLSPLDFAQLSVPALEDIQEVMK 228
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL----ELQKEGPVQGNLD 290
+ + +LK+ N I ++ +V + +A EL + V GN+
Sbjct: 229 SQN----VLHICGHTAGILKDMLS-CGYNGISIEEAVDMRYAQKVKHELGDKTQVCGNIS 283
Query: 291 -PMRLVVGNQVMIDGVN-AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L G + V +L+ L G + GI +N+ +V
Sbjct: 284 TSKTLFRGTP---EEVRGEVLEALEKGVDVVAPSCGIAASSPLENIQAMVNA 332
>gi|222624899|gb|EEE59031.1| hypothetical protein OsJ_10780 [Oryza sativa Japonica Group]
Length = 257
Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ ++G L +AGR Y+ + ++ +F + + VE++LQP +
Sbjct: 49 EPLLVSAIEGEE-GRETAGLAYEAGR--ESYQLLCERHPSFCERSELVDLVVEISLQPWK 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPI 123
+ D AILFSDIL + V+ +G DP+ T + ++ +
Sbjct: 106 VFTPDGAILFSDILTPLPRMNIPFDIVKGKGSVIFDPLRTAAAVNEVREF-VPEEWVPYV 164
Query: 124 FQSISILRKKLPNHI-------TLIGFCGA 146
Q+++ILR+++ + + LI +
Sbjct: 165 GQALNILREEIVDSVKETHPELPLILYASG 194
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA----ARSV--- 226
D L+ + + I G + IFD +E + V
Sbjct: 109 PDGAILFSDILTPLPRMNIPFDIVKGKGSV-IFDPLRTAAAVNEVREFVPEEWVPYVGQA 167
Query: 227 -----GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
I+ +V+ +P I +A G+G +L+ LT + + L L
Sbjct: 168 LNILREEIVDSVKETHPELPLILYASGSGGLLERL-PLTGVDVVSLGTVDMAEGRKRLGS 226
Query: 282 EGPVQGNLDPMRLVVGNQVMIDGV 305
VQGN+DP L + + + +
Sbjct: 227 NIAVQGNVDPGVLFGSKEFISNRI 250
>gi|166033158|ref|ZP_02235987.1| hypothetical protein DORFOR_02880 [Dorea formicigenerans ATCC
27755]
gi|166027515|gb|EDR46272.1| hypothetical protein DORFOR_02880 [Dorea formicigenerans ATCC
27755]
Length = 353
Score = 88.0 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/365 (14%), Positives = 117/365 (32%), Gaps = 54/365 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL------MRQAGRYLPEYRQIRKKFKNFLDMCYTPEY 54
M +++ + G ++ PI L M Y + + + + ++
Sbjct: 7 MTPKERAF-ALFAGKPVDRMPIKLFSPYIGMNFGASYQDAFVEAKSRAHWLIES------ 59
Query: 55 TVELTLQPIRRYNFDAAILFSDILVIADALG-------RNVRFV-ENEGPRMDPITTQEI 106
+R+ D + I I A G + + EN I ++
Sbjct: 60 --------YKRFGQDGLSVNYRIDGIPVAFGAESTYDPLGIPMIKENILKDFSEIDQLDL 111
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN 166
+ D F+++ I++ L + I P+T A+ +
Sbjct: 112 EKIRFEND---PNAQTAFEAVQIIQDALNDEIFTGVGLMGPFTTAANLAGVE-----IIL 163
Query: 167 RVFAYQNSRAFNWLLDFLSDVSAE----YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
+ ++ + LLDF +D++ E ++ QI G + + A L +F +
Sbjct: 164 KSMR-KDKEGLHKLLDFAADITIEVGRKFVENQIGIG-----LAEPTASLLSPKQFREFV 217
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+++ + +L+ + + + +D +V ++ A +L +
Sbjct: 218 IPYYVKVMDKWKEWGSRGSGFHICGDTTKLLETFPEM-GIRGVSIDSAVDIAVAKDLVGD 276
Query: 283 G-PVQGNLDP-MRLVVGNQVMIDGVNAILDVLGSGP---FIFNLGHGITPQVDPKNVLDL 337
+ GN+ P L + + V P I G I Q +N+
Sbjct: 277 KLSIMGNVSPIEILRGTPESIEQAVIDCFRKCWDNPRGFTIA-PGCDIPVQTSLENIDAY 335
Query: 338 VKTVR 342
+ R
Sbjct: 336 MSAAR 340
>gi|297722097|ref|NP_001173412.1| Os03g0340001 [Oryza sativa Japonica Group]
gi|255674488|dbj|BAH92140.1| Os03g0340001 [Oryza sativa Japonica Group]
Length = 91
Score = 87.6 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
++ + +I+ +V+ +P I +A G+G +L+ LT + + L L
Sbjct: 1 FSLPYLKQIVDSVKETHPELPLILYASGSGGLLERL-PLTGVDVVSLGTVDMAEGRKRLG 59
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGV 305
VQGN+DP L + + + +
Sbjct: 60 SNIAVQGNVDPGVLFGSKEFISNRI 84
>gi|89893732|ref|YP_517219.1| hypothetical protein DSY0986 [Desulfitobacterium hafniense Y51]
gi|219668107|ref|YP_002458542.1| methyltransferase MtaA/CmuA family [Desulfitobacterium hafniense
DCB-2]
gi|89333180|dbj|BAE82775.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538367|gb|ACL20106.1| methyltransferase MtaA/CmuA family [Desulfitobacterium hafniense
DCB-2]
Length = 348
Score = 87.2 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/328 (15%), Positives = 110/328 (33%), Gaps = 44/328 (13%)
Query: 38 IRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-EGP 96
+R F + + +L FD + + + + A+ LG + + + P
Sbjct: 38 MRLTNSFFPKAHFDAQSMADLAASAHHVLGFDTVMPYFSVHLEAEVLGCTISWGDGTVMP 97
Query: 97 RMDPITTQEIYLLNPNID-LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI 155
+ + P + L + ++I +L+K+ + +IG PW++A +
Sbjct: 98 VITKRPFDRVEQFEPPANFLNRPLCKQLLKAIRLLKKQSGGEVGIIGKVVGPWSLAYNLY 157
Query: 156 SGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--- 212
+ + + + ++ LS + E+ AQ AG D+I T A
Sbjct: 158 GAE---NLLLDTIL---EPKRTFNFINELSSIPIEFAKAQFEAGADMI----TWADHVTS 207
Query: 213 --LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
+ +E + + +I +A I G + + T +D
Sbjct: 208 DLISAKLYEEFVLP-IHKIAAAKLENRG--PIILHICGNVMDRLDLIKKTGFKIFHIDSR 264
Query: 271 VPLSFALELQKEGPVQGNL-----DPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
+ A+E+ + + L +P L + V ++
Sbjct: 265 NDIQKAVEICSDNIL---LTGSINNPYTLTNGSTSDVKKEVRRNIEQGIKL--------- 312
Query: 325 ITPQ------VDPKNVLDLVKTVRSEKI 346
I+P+ V N+L+LV ++ +
Sbjct: 313 ISPECAIPFKVPNANLLELVNSIHRAPL 340
>gi|150401031|ref|YP_001324797.1| uroporphyrinogen decarboxylase [Methanococcus aeolicus Nankai-3]
gi|150013734|gb|ABR56185.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus aeolicus
Nankai-3]
Length = 314
Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/299 (17%), Positives = 106/299 (35%), Gaps = 30/299 (10%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVR--FVENEGPRMDPITTQE 105
C E + + + D L SDI V +A+G E G E
Sbjct: 34 FCRNGEIFGKALCKAKEHFGHDIIHLSSDIYVEVEAMGLYDWSCISEGYG------KMDE 87
Query: 106 IYLLN-PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+ L+ IDL + ++I K + T AP+T+A+ + G
Sbjct: 88 DFDLDSLTIDLDGGRIPEYRKAIEYCNSK---NNTAFVSVSAPFTLAAIL--------RG 136
Query: 165 QNRVFAY--QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA 222
+R +N + L+ +++S + + + + + + +A
Sbjct: 137 IDRFMIDLIKNEKFAKDLIKKTTEISKIVIEDINEIAHPFVVDAVSSSSLISPEFYRKFA 196
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
+ + +++ A + + +L + ++ T + I D ++ +S A E K+
Sbjct: 197 FKPIKKVMKAC-----DFPILHMCGDINPILDDVKK-TGTKIISFDDNLDISKAFEAFKD 250
Query: 283 GPVQGNLDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
V GN+DP + + V ++ G FI + G + KN+ LV
Sbjct: 251 LIVFGNIDPSMMYYSKVDKVEMEVKKCMEAKGGD-FILSTGCSLPVGAPKKNLEALVHY 308
>gi|218192798|gb|EEC75225.1| hypothetical protein OsI_11494 [Oryza sativa Indica Group]
Length = 257
Score = 87.2 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 5 KQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+ ++ ++G L +AGR Y+ + ++ +F + + VE++LQP +
Sbjct: 49 EPLLVSAIEGEE-GRETAGLAYEAGR--ESYQLLCERHPSFCERSELVDLVVEISLQPWK 105
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPR-MDPITTQEIYLLNPNIDLFLNYLLPI 123
+ D AILFSDIL + V+ +G DP+ T + ++ +
Sbjct: 106 VFTADGAILFSDILTPLPRMNIPFDIVKGKGSVIFDPLRTAAAVNEVREF-VPEEWVPYV 164
Query: 124 FQSISILRKKLPNHI-------TLIGFCGA 146
Q+++ILR+++ + + LI +
Sbjct: 165 GQALNILREEIVDSVKETHPELPLILYASG 194
Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 14/136 (10%)
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA----ARSV--------GRI 229
D L+ + + I G + IFD +E + V I
Sbjct: 117 DILTPLPRMNIPFDIVKGKGSV-IFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEI 175
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNL 289
+ +V+ +P I +A G+G +L+ LT + + L L VQGN+
Sbjct: 176 VDSVKETHPELPLILYASGSGGLLERL-PLTGVDVVSLGTVDMAEGRKRLGSNIAVQGNV 234
Query: 290 DPMRLVVGNQVMIDGV 305
DP L + + + +
Sbjct: 235 DPGVLFGSKEFISNRI 250
>gi|310657392|ref|YP_003935113.1| uroporphyrinogen decarboxylase family protein [Clostridium
sticklandii DSM 519]
gi|308824170|emb|CBH20208.1| Uroporphyrinogen decarboxylase family protein [Clostridium
sticklandii]
Length = 356
Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 108/304 (35%), Gaps = 27/304 (8%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP--------ITTQEIY 107
+ R+ D A++ + + ALG + E+ P + + ++
Sbjct: 54 ANAQIACYERFGNDLAVVEYGLHGVGMALGSEMTDPEDAVPAIIKYILEDLDDVDNLDMS 113
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
L D L ++ ++ +K+ + + P+T A+ + K R
Sbjct: 114 KLELKNDKAFQLHL---EAAKLIIEKIGHEVPTGVLISGPFTAAASI-----YKTENLLR 165
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARS 225
+N + L++F ++ I GV ++ + D A L + ++ +
Sbjct: 166 A-TRRNPEKLHKLINFCNEALKMICKEFIKEGVLIL-LCDPIASGTILHQKQYREFVLPY 223
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGP 284
++ + ++ + + + + + +D V L + + + + P
Sbjct: 224 TIELMKEIHEAKGMV-CYHICGDTTSIVSDMVK-SGCDMLSIDNRVDLEYTKQMVGDKVP 281
Query: 285 VQGNLDPMRLVV--GNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+DP+ ++ + + V + P +I G ++ + +N+ +++
Sbjct: 282 ILGNVDPVEVLYLGNQEDVDLAVKNCIQKGYDSPCGYILASGCDLSGNLPLENIDQFMES 341
Query: 341 VRSE 344
R
Sbjct: 342 ARKY 345
>gi|255655750|ref|ZP_05401159.1| putative methyltransferase [Clostridium difficile QCD-23m63]
gi|296451018|ref|ZP_06892763.1| MtaA/CmuA family methyltransferase [Clostridium difficile NAP08]
gi|296879017|ref|ZP_06903014.1| MtaA/CmuA family methyltransferase [Clostridium difficile NAP07]
gi|296260149|gb|EFH06999.1| MtaA/CmuA family methyltransferase [Clostridium difficile NAP08]
gi|296429970|gb|EFH15820.1| MtaA/CmuA family methyltransferase [Clostridium difficile NAP07]
Length = 340
Score = 86.8 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/247 (17%), Positives = 95/247 (38%), Gaps = 18/247 (7%)
Query: 99 DPITTQEIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISG 157
IT +E D + + +P+ +S+S++ K + L P+T+A +
Sbjct: 91 HTITDREKLRKLDVPDPYTSGRMPLNIESLSLISKSI--KKPLYESIQGPFTLAGQLAGA 148
Query: 158 GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE 217
+ + + LL+F +++ Y +A AG I I + + L +
Sbjct: 149 TQLL------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDR 202
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-A 276
F+ Y +++ +I + K + +L N + +A+ LD + A
Sbjct: 203 FDEYIVKNLNKIYDELDCW----KGMHICGDTRELLDNMLD-CNIDAVSLDQILDYEEIA 257
Query: 277 LELQKEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKN 333
+ ++ + GNLDP++L+ + +L + G F+ + G +N
Sbjct: 258 PMIPRDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRGYDNFLCDFGCNCLNTTPVEN 317
Query: 334 VLDLVKT 340
+ +K
Sbjct: 318 LQAAIKA 324
>gi|12667197|gb|AAK01347.1|AF281259_7 methyltransferase/corrinoid CmuA [Hyphomicrobium chloromethanicum]
Length = 612
Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/355 (13%), Positives = 108/355 (30%), Gaps = 32/355 (9%)
Query: 1 MNERKQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ V + + P LM R IR+ E +
Sbjct: 7 MTSRERLFAAVTMQTLPDQVPCVPLLMT---------RGIREGGITVDQALRDGEASAHA 57
Query: 59 TLQPIRRYNFDAAILFSDILVIADALG-RNVRFVENEGPRM--DPITTQEI-----YLLN 110
++ ++++ D I +D+ + + + ++ P + P T+E
Sbjct: 58 KIKALKKFGGDVIIPGTDLFTPVECVEGCELDYLPYAQPSLVKHPTPTKEAFYRYKEKYL 117
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+L I ++ + + + + G P T A M +
Sbjct: 118 REGFKPSERVLQIQRA-RTMIARRKDTHAMPTPVGGPITRAQLMTGSSEFLSY------I 170
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVGR 228
+ + + D+ AG+DV I D + L + + R
Sbjct: 171 SDDPDYAKEVTELALDIVKNVCRMMFEAGIDVCNILDPFNSSDILPPDTYREFGLPYQKR 230
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGN 288
+ + ++ + F + ++ N G + + + + G
Sbjct: 231 LFAYIK-EIGGIGFTHTCTFTQPIWRDIANNGCFNFNGDMYPGMDHAKRAIGGQISLMGT 289
Query: 289 LDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKT 340
L P + + + V + +G +G I G I + +N+ +++T
Sbjct: 290 LSPFSTFMHGWTTDVANKVKKLAAEVGYNGGLIVMPGCDIDWTIPDENLKAMIET 344
>gi|213584369|ref|ZP_03366195.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 83
Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 67 NFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQS 126
DAAILFSDIL I DA+G + F EGPR T + + I + L + +
Sbjct: 1 PLDAAILFSDILTIPDAMGLGLYFEAGEGPRFTAPVTCKADVDKLPIPDPEDELGYVMNA 60
Query: 127 ISILRKKLPNHITLIGFCGAPWT 149
+ +R++L + LIGF G+PWT
Sbjct: 61 VRTIRRELKGEVPLIGFSGSPWT 83
>gi|225175361|ref|ZP_03729356.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiobacter alkaliphilus
AHT 1]
gi|225169113|gb|EEG77912.1| Uroporphyrinogen decarboxylase (URO-D) [Dethiobacter alkaliphilus
AHT 1]
Length = 353
Score = 86.1 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 36/353 (10%)
Query: 6 QKILEVLQGNVINPPPIWL---MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
Q+++ L + P +L M A +++ +++ E+ V L
Sbjct: 10 QRVMTALSHQEPDRVPFFLLLTMHGA-------KELSISIEDYFSKA---EHVVNGQLLM 59
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDP-ITTQE-IYLLNPNIDLFLNY 119
R+Y D F + +A G + + E+ P P I + + I L P +N
Sbjct: 60 QRKYGHDCIYTFFYAAIEVEAWGGEIVYTEDGSPNSGRPFIRSLDAIKSLEPPRPDKVNC 119
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L+ + ++ + L+ ++ N++ +IG +P+++ + + + Y+ F
Sbjct: 120 LVKVLEATTQLKLRVGNNLPIIGVVMSPFSLPAMQLG------FDKYIELLYEQGDLFWQ 173
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+ S ++ AQ+ AG I FD + + + + + + +S ++
Sbjct: 174 LMRVNSQHCVDWANAQLAAGATAICYFDPLSSSDIIPRDLYIKTGYKVAKQALSQIK--- 230
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVV 296
A G + N T + AIG+ LS E K+ + GNL+ + +
Sbjct: 231 -GPTATHLASGRALPISNLVSQTGTAAIGISALDELSEVKEHCKDRLSILGNLNGIAMTK 289
Query: 297 G-NQVMIDGVN-AILDVLGSGPFIF--NLGHGITP-QVDPKNVLDLVKTVRSE 344
Q + V AI G FI N HG P QV + ++ + ++VR+
Sbjct: 290 WTTQQAEEAVKNAICKAGKGGGFILADN--HGEIPYQVSDQVLMAISESVRTW 340
>gi|169824009|ref|YP_001691620.1| putative metyhltransferase [Finegoldia magna ATCC 29328]
gi|167830814|dbj|BAG07730.1| putative metyhltransferase [Finegoldia magna ATCC 29328]
Length = 371
Score = 86.1 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 16/232 (6%)
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + + + IT+ G P+T AS ++ + +N
Sbjct: 129 ETVCNFIEKAKKTKSSMDG-ITIFGAVTGPFTTAS------GVRPVEKLLRDTRKNKENL 181
Query: 178 NWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVR 234
+ LLD ++ + +++ G +I D A + + +FE +A + ++ A+
Sbjct: 182 HELLDLCTNYTIDFVRTFTDEIGGCFFKIADPVASMTVISKKQFEEFAQPHLTKLTDAIY 241
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMR 293
+ + +N++ T+ + LD + L ++GN+ PM
Sbjct: 242 EITGIKPMVHICGKTDKVWENFKD-TNFSRFSLDNIEDMGEFKNILGNSMIIEGNIAPMD 300
Query: 294 LV--VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
++ Q + + V IL P FI N G + +N+ +K V
Sbjct: 301 ILLNSDPQTVRNEVKNILQKASDSPKGFILNSGCTVCDHTPIENIESYIKAV 352
>gi|222055633|ref|YP_002537995.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
gi|221564922|gb|ACM20894.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter sp. FRC-32]
Length = 340
Score = 85.7 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 64/363 (17%), Positives = 131/363 (36%), Gaps = 45/363 (12%)
Query: 1 MN-ERKQKILEVLQGNVINPPPIW----LMRQA--------GRYLPEYRQIRKKFKNFLD 47
M+ KQ++L+ ++ ++ PP+ +M A G LPE +F
Sbjct: 1 MSLSPKQRLLDTVKKKKVDRPPVICTGGMMNAAIVDVMDRSGHTLPE--------GHF-- 50
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRM--DPITT- 103
+ + + F+ + + V A+ LG ++ F P++ +P +
Sbjct: 51 ---NSDLMAAIATDVHKDTGFENLGIPFCMTVEAEVLGSDIDFGTLACEPKIAREPFPSV 107
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+++ + + L +L + + L K P+ + +IG P + A+ ++ D
Sbjct: 108 RDVVYRDIDRMLGSGRILTLAGAAERLAKAHPD-VPVIGSVTGPISTAASIV------DP 160
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENY 221
Q + N +LD++SD + + +G I I D A LG F +Y
Sbjct: 161 MQFLKELRKEREGANRVLDYVSDFLVAFARILVESGATAICIGDPTATGEILGPKMFSDY 220
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
A + ++I + + G +K L ++AI D V L E
Sbjct: 221 AVTYLNKVIDGIHAT--GVPVLVHICGEMKAVKPSIPLLRADAISTDAFVNLRLLKEEYP 278
Query: 282 EGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ GN+ L + + ++ I + G++ N+ +
Sbjct: 279 QLTTMGNVSTFLLELGDPDKVARHTEGLVREGID---IISPACGLSTASPISNIRAMTSV 335
Query: 341 VRS 343
V+
Sbjct: 336 VKE 338
>gi|325261558|ref|ZP_08128296.1| hypothetical protein HMPREF0240_00531 [Clostridium sp. D5]
gi|324033012|gb|EGB94289.1| hypothetical protein HMPREF0240_00531 [Clostridium sp. D5]
Length = 371
Score = 85.7 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 29/267 (10%)
Query: 99 DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
+P+ EI L+ + +L + + +KL P +
Sbjct: 112 NPLEDAEIEDLDSYLWPKAADMLDVT-GMRARAEKLYEENEYAISLRMPCN--GILEIAC 168
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE---YLIAQIHAGVDVIQIFDTHAGC--- 212
+++ V + + L++ + DV E YL+ Q+ VD+++ D +
Sbjct: 169 WLRGMENFMVDTITDPEFAHALIEKILDVQIEMYEYLLDQVGEYVDIVESGDDYGSQQSL 228
Query: 213 -LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI------ 265
L + + + R+ A+++K P AK + GA + + +
Sbjct: 229 LLSPEAYREFIFPARKRLNQAIKQKAPQAKIYLHSCGAIADIIEDLIDCGVDILNPVQTS 288
Query: 266 --GLDWSVPLSFALELQKEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLGS-GPFIFNL 321
G+D P++ + G +D +V + + + V ++D+LG G FI L
Sbjct: 289 AEGMD---PVTLKNKFGDRICFHGAVDTQKAMVGSVEQVENEVKRLIDILGKDGGFI--L 343
Query: 322 G---HGITPQVDPKNVLDLVKTVRSEK 345
G H I + P+NV+ + + +
Sbjct: 344 GSCNH-IQSDIPPENVVRMFEYAKEYS 369
>gi|302380006|ref|ZP_07268485.1| methyltransferase, MtaA/CmuA family [Finegoldia magna
ACS-171-V-Col3]
gi|302312232|gb|EFK94234.1| methyltransferase, MtaA/CmuA family [Finegoldia magna
ACS-171-V-Col3]
Length = 371
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 84/232 (36%), Gaps = 16/232 (6%)
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + + + IT+ G P+T AS ++ + +N
Sbjct: 129 ETVCNFIEKAKKTKSSMDG-ITIFGAVTGPFTTAS------GVRPVEKLLRDTRKNKENL 181
Query: 178 NWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVR 234
+ LLD ++ + +++ G +I D A + + +FE +A + ++ A+
Sbjct: 182 HELLDLCTNYTIDFVRTFTDEIGGCFFKIADPVASMTVISKKQFEEFAQPHLTKLTDAIY 241
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMR 293
+ + +N+ T+ + LD + + ++GN+ PM
Sbjct: 242 EITGIKPMVHICGKTDKVWENFTD-TNFSRFSLDNIEDMGEFKNVLGNSMIIEGNIAPMD 300
Query: 294 LV--VGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTV 341
++ Q + + V IL P FI N G + +N+ +K V
Sbjct: 301 ILLNSDPQTVRNEVKNILQKASDSPKGFILNSGCTVCDHTPIENIESYIKAV 352
>gi|154500336|ref|ZP_02038374.1| hypothetical protein BACCAP_04003 [Bacteroides capillosus ATCC
29799]
gi|150270841|gb|EDM98124.1| hypothetical protein BACCAP_04003 [Bacteroides capillosus ATCC
29799]
Length = 452
Score = 85.3 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/351 (16%), Positives = 128/351 (36%), Gaps = 31/351 (8%)
Query: 5 KQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
K+ I + ++ P W AG + K ++ + E ++
Sbjct: 3 KELIFKTMRHEPTERVP-WVPF---AG-----IHSGKLKGYTAEEILQDGQKLYECLMEV 53
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPI--TTQEIYLLNPNIDLFLN 118
R Y D + D+ + A+ LG ++ + ++ P + P + I
Sbjct: 54 ARLYGPDGMPIMFDLQLEAEILGCDLMWAKDNPPSVASHPFEGDNKGIPCRCKLPTPESG 113
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ + ++++ L+ + + I L G P+T+AS++ D + +
Sbjct: 114 RIPVMLEAMTKLKASVGDDIALYGLICGPFTLASHLRGSEIFLDMLMDEQYVRD------ 167
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYP 238
L+ + ++ S I+AG+DVI + D + F+ A S + +R +
Sbjct: 168 -LVSYCAEASIRMCDYYINAGMDVIAVVDPLVSQIAPESFDAMLADSFKAVFDYIRSR-- 224
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDP---MR 293
F G T+ ++I +D +V + + + + GN+ P +
Sbjct: 225 GVYSSFFVCGNATPQLEVMCKTNPDSIAVDENVDFVYGKSVSDKYNIAISGNI-PLTTVM 283
Query: 294 LVVGNQVMIDGVNAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
L + + V +LD + I + G + V +N + + V++
Sbjct: 284 LHGTPKDNMKYVVDLLDKVEDHRNMIVSPGCDMPYDVPVENTVACSQAVKN 334
>gi|315654486|ref|ZP_07907392.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
gi|315490950|gb|EFU80569.1| uroporphyrinogen decarboxylase [Mobiluncus curtisii ATCC 51333]
Length = 133
Score = 84.9 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L E E+ A I + IS + GA ++L + N +G+ +
Sbjct: 4 LTEGEYACLAESYAREIYNEFDE---GIIRISCSLGAEHLLSSISPY--VNVLGVGDELT 58
Query: 273 LSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDP 331
L+ A ++ +QGNLDP +++G +LD S P +FN+ + P DP
Sbjct: 59 LAEAAQIVPGMVLQGNLDPDLILLGGSDAQAAARQVLDSGLSAPAHVFNVAGRLDPDSDP 118
Query: 332 KNVLDLVKTVRSEK 345
V LV + +
Sbjct: 119 DEVRRLVDFIHDYR 132
>gi|182416144|ref|YP_001821210.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
gi|177843358|gb|ACB77610.1| Uroporphyrinogen decarboxylase (URO-D) [Opitutus terrae PB90-1]
Length = 354
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 94/253 (37%), Gaps = 24/253 (9%)
Query: 105 EIYLLNPNIDLFLN-YLLPIFQSISILRKKLPN--HITLIGFCGAPWTVASYMISGGFIK 161
E P ++ + ++ Q I + ++++ I I P M + GF +
Sbjct: 105 EDVEKLPEYEVENDAFMALTLQRIRMQKQRVFGTGEIMPIVTSRGP------MCTAGFAR 158
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIF--DTHAGCLGEHEF 218
+ + + + LLD + + ++L AQ A G DV IF D G + E +
Sbjct: 159 GTTELMIDLVEKPEWAHKLLDLCTRLIIDWLKAQEKAIGRDVEGIFLLDDIVGFVNEEHY 218
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-- 276
+ + + RI A + + K L +Y N L+W A
Sbjct: 219 QEFCHPYLKRICDAFPKDW--VKIYHNDAEVQACL-DYLPDVGFNV--LNWGKQTDIAEV 273
Query: 277 -LELQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDP 331
+ K + GN++P + + + + +L+ G I ++G G +P +
Sbjct: 274 KERVGKRMCLMGNVNPLEVGVRGTPEEVRAATLDVLEKGGSEGRGMILSVGGGTSPGMPR 333
Query: 332 KNVLDLVKTVRSE 344
N+L + ++
Sbjct: 334 ANILAMQAALKEF 346
>gi|302874132|ref|YP_003842765.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium cellulovorans
743B]
gi|307689609|ref|ZP_07632055.1| uroporphyrinogen decarboxylase [Clostridium cellulovorans 743B]
gi|302576989|gb|ADL51001.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium cellulovorans
743B]
Length = 355
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/315 (16%), Positives = 106/315 (33%), Gaps = 28/315 (8%)
Query: 49 CYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN--EGPRMDP---ITT 103
+ L DA + D+ + A G+ + F +N P D
Sbjct: 50 STDSDLATRSLLAAQEIIGHDAFLTLVDLSIEAADFGQEIIFPKNSTAYPNFDNQFIKNA 109
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
E + + + L K + ++GF P V S + + H
Sbjct: 110 DEYNKIKYVNPRESTRMKSVIDICGGLAKAKGKEVGVLGFVYGPLGVLSQI------RGH 163
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD---THAGCLGEHEFEN 220
+ ++ + ++ ++DV +Y+ AQI G + I D + L + ++E
Sbjct: 164 KELFRDLIKHPQEVLGAVEIITDVLVDYVKAQIETGAHAVVI-DPLYSSPTVLSKKQWET 222
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-----LSF 275
+ V RI A+R G G + + + +I +
Sbjct: 223 FEGPYVKRIADAIREA--GGLVSVHNCGNGVYFEEVIKWMNPGSISVAHPAYGCNNWEEH 280
Query: 276 ALELQKEGPVQGNLDPM---RLVVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVD 330
A + ++ G DP ++ +++ D + I D+ + FI + G P +
Sbjct: 281 AKKWGQKVVTIGYSDPANTGLIMTPKEIIKDCHSQI-DLFRQNNAGFILSTGCEFPPNGN 339
Query: 331 PKNVLDLVKTVRSEK 345
+ + +V ++ K
Sbjct: 340 LLSAIAMVNASKTYK 354
>gi|168333716|ref|ZP_02691969.1| Uroporphyrinogen decarboxylase (URO-D) [Epulopiscium sp. 'N.t.
morphotype B']
Length = 450
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 101/282 (35%), Gaps = 24/282 (8%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP----NIDLFLNY 119
+ Y D + D+ + A+ LG + + ++ P + + + P
Sbjct: 54 KLYKPDGQPVVFDLQLEAEILGCELVWTKDGPPSVKTHPLEGSENIIPCTCSVPGPEDGR 113
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
L + + L++++ + L G P+T+AS++ D Y +
Sbjct: 114 LPMVLDVMKSLKEQVGDTTALYGLICGPFTLASHLRGNDIFMDL-------YDDEDYVKK 166
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
LL+F V+ + AG+DVI + D + F+ + ++ + +R
Sbjct: 167 LLEFCLLVAKAMTKMYVDAGMDVIAVVDPLVSQISAEHFQEFLHDPFSKLFAYIREL--G 224
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK--EGPVQGN--LDPMRLV 295
F G T ++I +D +V L A ++ + GN L + L
Sbjct: 225 VYSSFFVCGNATRNIAVMCETKPDSISVDENVNLVAAKKITDSYNIAIGGNIPLTSVMLH 284
Query: 296 VGNQVMIDGVNAILDVLGSGPFIFNL----GHGITPQVDPKN 333
Q + V ++D + + NL G + V +N
Sbjct: 285 GTQQDNMKYVIDLVDKIENKT---NLIIAPGCDMPYDVPIEN 323
>gi|226328701|ref|ZP_03804219.1| hypothetical protein PROPEN_02596 [Proteus penneri ATCC 35198]
gi|225201887|gb|EEG84241.1| hypothetical protein PROPEN_02596 [Proteus penneri ATCC 35198]
Length = 80
Score = 84.5 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
M+E + + L L ++ P+W+MRQAGRYLPEY++ R + F
Sbjct: 5 MSELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKETRAQAGGF 50
>gi|255100867|ref|ZP_05329844.1| putative methyltransferase [Clostridium difficile QCD-63q42]
Length = 340
Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 91/243 (37%), Gaps = 17/243 (6%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ L+ + +S+S++ K + L P+T+A + +
Sbjct: 95 DRDKLRKLDVPDPYTSGRMPLNIESLSVISKSI--KKPLYESIQGPFTLAGQLAGATQLL 152
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ + LL+F +++ Y +A AG I I + + L + F+ +
Sbjct: 153 ------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEF 206
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQ 280
+++ +I + + K + +L N + +A+ LD + A +
Sbjct: 207 IVKNLNKIYNELDCW----KGMHICGDTRELLDNMLS-CNIDAVSLDQILDYEEIAPMIP 261
Query: 281 KEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDL 337
++ + GNLDP++L+ + +L + G F+ + G +N+
Sbjct: 262 RDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRGYDNFLCDFGCNCLNTTPVENLQAA 321
Query: 338 VKT 340
+K
Sbjct: 322 IKA 324
>gi|255306755|ref|ZP_05350926.1| putative methyltransferase [Clostridium difficile ATCC 43255]
Length = 340
Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 90/243 (37%), Gaps = 17/243 (6%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ L+ + +S+S++ K + L P+T+A + +
Sbjct: 95 DRDKLRKLDVPDPYTSGRMPLNIESLSVISKSI--KKPLYESIQGPFTLAGQLAGATQLL 152
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ + LL+F +++ Y +A AG I I + + L + F+ +
Sbjct: 153 ------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEF 206
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQ 280
+++ +I + + K + +L N + +A+ LD + A +
Sbjct: 207 IVKNLNKIYNELDCW----KGMHICGDTRELLDNMLS-CNIDAVSLDQILDYEEIAPMIP 261
Query: 281 KEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDL 337
++ + GNLDP++L+ + +L + F+ + G +N+
Sbjct: 262 RDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDNFLCDFGCNCLNTTPVENLQAA 321
Query: 338 VKT 340
+K
Sbjct: 322 IKA 324
>gi|126699340|ref|YP_001088237.1| putative methyltransferase [Clostridium difficile 630]
gi|115250777|emb|CAJ68601.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium difficile]
Length = 340
Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 90/243 (37%), Gaps = 17/243 (6%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ L+ + +S+S++ K + L P+T+A + +
Sbjct: 95 DRDKLRKLDVPDPYTSGRMPLNIESLSVISKSI--KKPLYESIQGPFTLAGQLAGATQLL 152
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ + LL+F +++ Y +A AG I I + + L + F+ +
Sbjct: 153 ------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEF 206
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQ 280
+++ +I + + K + +L N + +A+ LD + A +
Sbjct: 207 IVKNLNKIYNELDCW----KGMHICGDTRELLDNMLS-CNIDAVSLDQILDYEEIAPMIP 261
Query: 281 KEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDL 337
++ + GNLDP++L+ + +L + F+ + G +N+
Sbjct: 262 RDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRRYDNFLCDFGCNCLNTTPVENLQAA 321
Query: 338 VKT 340
+K
Sbjct: 322 IKA 324
>gi|153939188|ref|YP_001391543.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum F str. Langeland]
gi|152935084|gb|ABS40582.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum F str. Langeland]
gi|295319569|gb|ADF99946.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum F str. 230613]
Length = 356
Score = 84.1 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 103/302 (34%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGSQMSDPEDSVPAIIKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ +IL K+ + P+T A+ + D +
Sbjct: 114 KLELKNDKAFQLHI-EACNILIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + + I +D V L + + + + P+
Sbjct: 226 DLMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + P +I G ++ V +N+ + + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKTCIQKTYDSPCGYILASGCDLSGGVPLENIDQFMASAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|219558688|ref|ZP_03537764.1| uroporphyrinogen decarboxylase [Mycobacterium tuberculosis T17]
Length = 62
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 1 MNERKQ----KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ R+ L + G + P+W MRQAGR LPEYR +R+++ + L C+ P+
Sbjct: 1 MSTRRDLPQSPYLAAVTGRKPSRVPVWFMRQAGRSLPEYRALRERY-SMLAACFEPDVAC 59
Query: 57 ELT 59
E+T
Sbjct: 60 EIT 62
>gi|187779095|ref|ZP_02995568.1| hypothetical protein CLOSPO_02690 [Clostridium sporogenes ATCC
15579]
gi|187772720|gb|EDU36522.1| hypothetical protein CLOSPO_02690 [Clostridium sporogenes ATCC
15579]
Length = 356
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 101/302 (33%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGTQMSDPEDSVPAIMKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ IL K+ + P+T A+ + D +
Sbjct: 114 KLELKKDKAFQLHI-EACDILIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + + I +D V L + + + + P+
Sbjct: 226 DLMEDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + P +I G ++ V +N+ + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKTCIQKTYDSPCGYILASGCDLSGGVPLENIDQFMAAAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|167760834|ref|ZP_02432961.1| hypothetical protein CLOSCI_03220 [Clostridium scindens ATCC 35704]
gi|167661721|gb|EDS05851.1| hypothetical protein CLOSCI_03220 [Clostridium scindens ATCC 35704]
Length = 356
Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/314 (20%), Positives = 115/314 (36%), Gaps = 24/314 (7%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT 102
+ D+ + PE E + P RY +D + + I +ALG V + E P MD P+
Sbjct: 47 SVWDLSHDPEKMAEAEIIPFNRYGYDRMDIGPNSRGITEALGGKVIYPEKGVPYMDAPLI 106
Query: 103 TQEIYL--LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF- 159
+ L + P + ++ IL K + + G P T+AS +
Sbjct: 107 QDYVRLESIEPVDARTNARIGDFARTAQILADKALRIVPVEMSIGGPLTIASNLRGVERL 166
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDV--SAEYLIAQIHAGVDVIQIFDTHA--GCLGE 215
++D + L+ ++D S L AQ G I + D A +G
Sbjct: 167 LRDLRKC-------PDDALRLIRLVADSERSCIDLAAQYGMG---IAMADPVANPALIGP 216
Query: 216 HEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF 275
+E + + K K G + +Y + + N + LD V L
Sbjct: 217 KMYERFVYPFTKELTDYAYEKT-GKKVSLHMCGQTEQIWDYFKKYELNEVSLDNIVDLEK 275
Query: 276 AL-ELQKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVL--GSGPFIFNLGHGITPQVD 330
A EL P+ GN+DP+ +++ + + V + + ++ G I
Sbjct: 276 AAQELGPYIPIAGNVDPVEIILNGTREEITQAVTSCISAGLKSRKGYVLASGCDIPETTR 335
Query: 331 PKNVLDLVKTVRSE 344
P+ + ++ R+
Sbjct: 336 PEQIDSFMEAARAY 349
>gi|254975370|ref|ZP_05271842.1| putative methyltransferase [Clostridium difficile QCD-66c26]
gi|255092760|ref|ZP_05322238.1| putative methyltransferase [Clostridium difficile CIP 107932]
gi|255314499|ref|ZP_05356082.1| putative methyltransferase [Clostridium difficile QCD-76w55]
gi|255517176|ref|ZP_05384852.1| putative methyltransferase [Clostridium difficile QCD-97b34]
gi|255650280|ref|ZP_05397182.1| putative methyltransferase [Clostridium difficile QCD-37x79]
gi|260683396|ref|YP_003214681.1| putative methyltransferase [Clostridium difficile CD196]
gi|260686992|ref|YP_003218125.1| putative methyltransferase [Clostridium difficile R20291]
gi|260209559|emb|CBA63171.1| putative methyltransferase [Clostridium difficile CD196]
gi|260213008|emb|CBE04333.1| putative methyltransferase [Clostridium difficile R20291]
Length = 340
Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 91/243 (37%), Gaps = 17/243 (6%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ L+ + +S+S++ K + L P+T+A + +
Sbjct: 95 DRDKLRKLDVPDPYTSGRMPLNIESLSVISKSI--KKPLYESIQGPFTLAGQLAGATQLL 152
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ + LL+F +++ Y +A AG I I + + L + F+ Y
Sbjct: 153 ------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEY 206
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQ 280
+++ +I + + K + +L N + +A+ LD + A +
Sbjct: 207 IVKNLNKIYNELDCW----KGMHICGDTRELLDNMLS-CNIDAVSLDQILDYEEIAPMIP 261
Query: 281 KEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDL 337
++ + GNLDP++L+ + +L + G F+ + G +N+
Sbjct: 262 RDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRGYDNFLCDFGCNCLNTTPVENLQAA 321
Query: 338 VKT 340
+K
Sbjct: 322 IKA 324
>gi|306520254|ref|ZP_07406601.1| putative methyltransferase [Clostridium difficile QCD-32g58]
Length = 318
Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 91/243 (37%), Gaps = 17/243 (6%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ L+ + +S+S++ K + L P+T+A + +
Sbjct: 73 DRDKLRKLDVPDPYTSGRMPLNIESLSVISKSI--KKPLYESIQGPFTLAGQLAGATQLL 130
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
+ + LL+F +++ Y +A AG I I + + L + F+ Y
Sbjct: 131 ------RCIITDKKFVEELLEFTTELVRRYAVAANKAGAKYISIAEPTSVTLSKDRFDEY 184
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQ 280
+++ +I + + K + +L N + +A+ LD + A +
Sbjct: 185 IVKNLNKIYNELDCW----KGMHICGDTRELLDNMLS-CNIDAVSLDQILDYEEIAPMIP 239
Query: 281 KEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDL 337
++ + GNLDP++L+ + +L + G F+ + G +N+
Sbjct: 240 RDIVLIGNLDPIKLLGRSKPDKIRRETLKLLKKMRGYDNFLCDFGCNCLNTTPVENLQAA 299
Query: 338 VKT 340
+K
Sbjct: 300 IKA 302
>gi|167950693|ref|ZP_02537767.1| HemE protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 79
Score = 83.7 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+R++L + LIGF G+PWT+A+YM+ GG K+ Q + + + LL ++D
Sbjct: 4 RTIRRELDGRVPLIGFSGSPWTLATYMVEGGGTKNFAQVKGMMFDRPELMHQLLSRVADS 63
>gi|325262486|ref|ZP_08129223.1| hypothetical protein HMPREF0240_01472 [Clostridium sp. D5]
gi|324032318|gb|EGB93596.1| hypothetical protein HMPREF0240_01472 [Clostridium sp. D5]
Length = 454
Score = 83.4 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/308 (17%), Positives = 113/308 (36%), Gaps = 21/308 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQE 105
++ + E ++ + Y + D+ V A+ LG + + ++ P + E
Sbjct: 39 EVLQDGDKLFEALMEVNKLYKPAGQPVIFDLQVEAECLGCKLVWADDAPPSVANHPMEGE 98
Query: 106 IYLLNP----NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
L P + I + +++ + + L G P+T+A+++
Sbjct: 99 EELETPCYCTIPTKESGRIPMIMDVMRRMKEAVGDTTALYGLICGPFTLATHLRGNDIFM 158
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENY 221
D Y + A L++ ++ + I AG+DVI + D + FE +
Sbjct: 159 D-------MYDDEDAVIEFLEYCDAIAMKMAEYYIEAGMDVIAVVDPLISQISSDHFEMF 211
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
+ ++ +R A F G T ++I +D +V L A +
Sbjct: 212 MSAPFKKLFDHIREL--GALSSFFVCGDATRNIEVMCQTGPDSISIDENVDLLAAKAITD 269
Query: 282 E--GPVQGNLDP---MRLVVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVL 335
+ + GN+ P + L Q + V +LD + + FI G + V +N +
Sbjct: 270 KYNVALGGNI-PLTTIMLHGTQQDNMKFVIDLLDNMPNKKNFILAPGCDMPYAVPVENTI 328
Query: 336 DLVKTVRS 343
+V+ +
Sbjct: 329 GVVQAIHE 336
>gi|213615620|ref|ZP_03371446.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 46
Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
M E + + L L ++ P+W+MRQAGRYLPEY+ R + +F
Sbjct: 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDF 46
>gi|254443584|ref|ZP_05057060.1| Uroporphyrinogen decarboxylase family [Verrucomicrobiae bacterium
DG1235]
gi|198257892|gb|EDY82200.1| Uroporphyrinogen decarboxylase family [Verrucomicrobiae bacterium
DG1235]
Length = 586
Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 125/310 (40%), Gaps = 26/310 (8%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDIL-VIADALGRNVRFVEN----EGPRMDPI 101
++C P+ VE L RY D + D+ V A+ALG + + ++ G PI
Sbjct: 33 EICRDPDLLVEGLLAEYERYKPDFLTVGIDVYNVEAEALGCKIVYFDDSPDVPGVEDYPI 92
Query: 102 TTQEIYLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
D + +P++ ++ L +K+ + I + G P+++AS ++
Sbjct: 93 KNLADIDKLKIPDPTKDGRMPLYLEAAKKLHEKVGHEIKIRGAITGPFSLASELMGA--- 149
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEF 218
V Q+ + L++F + V+A + A I G+D I IFD+ A F
Sbjct: 150 ---ENFIVMTMQDPQYTVKLMEFTARVAAAFGKAFIDIGIDPI-IFDSRAMPPLCSPQIF 205
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS--FA 276
++ ++ RI+ +K + G + + TD+ I D+ +
Sbjct: 206 QDIVSKVYRRILIPELKKAGAKQIPLIIGGDTTPILDAIIDTDTTQILCDFEGDIELFKK 265
Query: 277 LELQKEGPVQGNLDPMRLVVGN-QVMIDGVNAILDV-LGSGPFIFNLGHGITP-QVDPKN 333
+ P++ N+DP L +G + D IL+ FI LG G+ P++
Sbjct: 266 KAIDHNLPMRVNVDPRLLHLGPIDKIQDFTMNILNKCWDHPGFI--LGTGVAAYDCPPEH 323
Query: 334 VLDLVKTVRS 343
+ VR+
Sbjct: 324 ----IDAVRA 329
>gi|170758832|ref|YP_001787619.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A3 str. Loch Maree]
gi|169405821|gb|ACA54232.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 356
Score = 83.4 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/301 (13%), Positives = 101/301 (33%), Gaps = 21/301 (6%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
+ + R+ D ++ + + ALG + E+ P + T ++ ++
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGTQMSDPEDSVPAIMKYTLDDLDNVHKLDMS 113
Query: 116 FLNYLLPI-----FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
L ++ IL K+ + P+T A+ + D +
Sbjct: 114 KLELRKDKAFQLHIEACDILIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA---T 167
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGR 228
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 168 RKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTID 226
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQG 287
++ + ++ + + + + I +D V L + + + + P+ G
Sbjct: 227 LMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPILG 284
Query: 288 NLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVRS 343
N+DP ++ + V + + P +I G ++ +V +N+ + R
Sbjct: 285 NVDPVGTLILGSTNDVDLAVKSCIQKTYDSPCGYILASGCDLSGRVPLENIDQFMAAARK 344
Query: 344 E 344
Sbjct: 345 Y 345
>gi|84489578|ref|YP_447810.1| MtaA3 [Methanosphaera stadtmanae DSM 3091]
gi|84372897|gb|ABC57167.1| MtaA3 [Methanosphaera stadtmanae DSM 3091]
Length = 380
Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 55/352 (15%), Positives = 109/352 (30%), Gaps = 42/352 (11%)
Query: 6 QKILEVLQGNVINPPP------IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
+ G + P + LM E + K F + E V L
Sbjct: 5 DNLANAFAGKEVEKVPAASIVSVALM--------EGME--KTGAGFPESHTNAEKMVALG 54
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVE--NEGPRMDPITTQEIYLLNPNIDLFL 117
+ ++ L D+ + A+A+G V + P + + D FL
Sbjct: 55 ESAHKYAGVESINLPFDLAIEAEAMGCTVDLRDANEHIPEITASPFFDDLSGVELCDDFL 114
Query: 118 N--YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ + + ++ I R+K P+ + LI P+T+ ++ N
Sbjct: 115 SNGRIPVVAEACQIAREKYPD-VPLISGQIGPFTLLGQIVG------IEYLMKCLATNPN 167
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVGRIISAV 233
++ +D E + A V +++ A L F+ + RI A
Sbjct: 168 EVKVAVNKCADAVIEVVKAYNELDVQGDCMYEPSIAADLLPPEMFDEIVKYPLKRIADAA 227
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP----VQGNL 289
+ + G + + N + V + A +++ + + GN+
Sbjct: 228 -----DFNIVLHVCGDTTPILEHTLDLGYNGFSFEDCVNVKEANKIKYDLKSNTQLVGNV 282
Query: 290 DPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
L G+ + + + LD I + P K + LVK
Sbjct: 283 ATDSLFKGDFESIREESFRALDRGID---ILGSSCCVPPGTPLKAMEVLVKA 331
>gi|330813368|ref|YP_004357607.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486463|gb|AEA80868.1| uroporphyrinogen decarboxylase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 93
Score = 83.0 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 254 KNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL 312
+ + + + +D + ++ ++ K+ +QG +DP L ++M ++ L+
Sbjct: 1 MEFCNVVKPDGLSIDSKIDVNLILKKIGKKITIQGGMDPKYLNSKKKLMEKKIHFYLNKF 60
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
S +IFNLGHG+ + P V LVK VRS
Sbjct: 61 KSRNYIFNLGHGVPKETSPSTVHKLVKVVRSFS 93
>gi|330893618|gb|EGH26279.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 46
Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF 45
+ + L L ++ P+W+MRQAGRYLPEYR R +F
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRASAGDF 46
>gi|148380194|ref|YP_001254735.1| uroporphyrinogen decarboxylase [Clostridium botulinum A str. ATCC
3502]
gi|153931405|ref|YP_001384496.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|153934692|ref|YP_001388012.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. Hall]
gi|168179930|ref|ZP_02614594.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum NCTC 2916]
gi|170756021|ref|YP_001781855.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum B1 str. Okra]
gi|148289678|emb|CAL83782.1| putative uroporphyrinogen decarboxylase [Clostridium botulinum A
str. ATCC 3502]
gi|152927449|gb|ABS32949.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152930606|gb|ABS36105.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. Hall]
gi|169121233|gb|ACA45069.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum B1 str. Okra]
gi|182669402|gb|EDT81378.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum NCTC 2916]
Length = 356
Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 102/302 (33%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGTQMSDPEDSVPAIMKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ +L K+ + P+T A+ + D +
Sbjct: 114 KLELKKDKAFQLHI-EACDVLIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + + I +D V L + + + + P+
Sbjct: 226 DLMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + P +I G ++ V +N+ + + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKTCIQKTYDSPCGYILASGCDLSGGVPLENIDQFMASAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|226949515|ref|YP_002804606.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
gi|226844244|gb|ACO86910.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
Length = 356
Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 103/302 (34%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGTQMSDPEDSVPAIMKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ IL K+ + P+T A+ + D +
Sbjct: 114 KLELKKDKAFQLHI-EACDILIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + + I +D V L + + + + P+
Sbjct: 226 DLMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + + P +I G ++ V +N+ + + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKSCIQKTYDSPCGYILASGCDLSGGVPLENIDQFMTSAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|257065268|ref|YP_003144940.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
gi|256792921|gb|ACV23591.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
Length = 343
Score = 82.2 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/207 (14%), Positives = 63/207 (30%), Gaps = 10/207 (4%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G T+ M + + Q + + LL ++ I G
Sbjct: 128 VGVSVTLPGAMTAASGLYPVAQLLRAKRKQPEQLHKLLKICNEAIKLVCEEFIKLGA-TP 186
Query: 204 QIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
+ D A + E EF ++ + + + +
Sbjct: 187 FLCDPVASGTIINEKEFREFSLPYTQEVFKFCHDNGGGC-GYHICGDTTKLTQAMSE-SG 244
Query: 262 SNAIGLDWSVPLSFALEL-QKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLGSGP-- 316
+ + +D +V LS+ E+ + P+ GN+ P ++ + + + L P
Sbjct: 245 CDMLSVDDAVDLSYVKEVCGDKLPLIGNVSPNATMMLGTPEDVRRNIKENLKKAYDSPCG 304
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRS 343
+I G I +NV + VR
Sbjct: 305 YIVATGCDIPLPAPIENVDAFMDGVRE 331
>gi|325663330|ref|ZP_08151780.1| hypothetical protein HMPREF0490_02521 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086891|ref|ZP_08335968.1| hypothetical protein HMPREF0987_02271 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325470784|gb|EGC74014.1| hypothetical protein HMPREF0490_02521 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330410057|gb|EGG89492.1| hypothetical protein HMPREF0987_02271 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 347
Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/309 (20%), Positives = 105/309 (33%), Gaps = 41/309 (13%)
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPN 112
E V+ L +R+ FD + + I+DAL D + ++ L +
Sbjct: 55 ENMVKAELMSYQRFGFDRLGIGPNTRGISDALA-------------DQVPDKKQGSLVLD 101
Query: 113 IDLFLNYLLPI-----------FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
L YL P+ Q+ +L++ + + G P T+AS++ +
Sbjct: 102 DYSKLEYLEPVNARNDLVIQRFLQAAEMLQESAGEIVPVEISIGGPLTIASFL------R 155
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFE 219
+ +N LL + D + A GV I + D A +G +E
Sbjct: 156 EIELLLRDCRRNGDKVQKLLRIIVDSQKSCIDAFAQYGV-GIAMADPVANPALIGPKLYE 214
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALE 278
+ + + K GA Y + Y N I LD V L A E
Sbjct: 215 KFVFPYTKELTDYALERT-GKKVSLHMCGATYSIWKYIEQYQLNEISLDNIVDLDRAARE 273
Query: 279 LQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILD---VLGSGPFIFNLGHGITPQVDPKN 333
L K+ P+ GN+DP L + + V ++ G G I P+
Sbjct: 274 LGKKVPIAGNVDPVQSMLNGTKEEIFADVQKCIELGSSAEKGFH-LTTGCDIPDGTSPEK 332
Query: 334 VLDLVKTVR 342
V ++ R
Sbjct: 333 VDWFMEAAR 341
>gi|166033159|ref|ZP_02235988.1| hypothetical protein DORFOR_02881 [Dorea formicigenerans ATCC
27755]
gi|166027516|gb|EDR46273.1| hypothetical protein DORFOR_02881 [Dorea formicigenerans ATCC
27755]
Length = 353
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/313 (16%), Positives = 108/313 (34%), Gaps = 24/313 (7%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PIT 102
+ D + + + RY +D ++ + I +ALG + EN P D P+
Sbjct: 46 SVRDFWFDVKKMAQAERIVFNRYGYDRIVIGPNTRGIVEALGGKFIYPENGVPYADAPMI 105
Query: 103 TQ--EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ ++ + P + + IL ++ + + G P+T+ S + G
Sbjct: 106 SDYKKLDEMEPVEAKRDPRIAVFIEEAKILSEEAQGIVPIEASIGGPFTITSSL--RGVE 163
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEF 218
K R + + L+ ++D + G I + D A +G +
Sbjct: 164 KLLRDCRKYG----EEVHRLMRIVTDSQKSCIDMAAQYG-LGIAMADPVANPALIGPKMY 218
Query: 219 ENYAARSVGRIISAVRRKYPN---AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF 275
E + + K + + L Y+ N + LD + +
Sbjct: 219 EKFVFPYTKELTDYAYEKTGHKVSLHMCGDTRSIWKYLGQYQ----LNELSLDNIIDIKQ 274
Query: 276 AL-ELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVL--GSGPFIFNLGHGITPQVD 330
A E+ E P+ GN+DP+ +V + + V +++ + G I D
Sbjct: 275 AADEIGSEVPIAGNVDPVSIVMKGRKEEIFADVKRCVEIGSKAKKGYTLATGCDIPETTD 334
Query: 331 PKNVLDLVKTVRS 343
P+ + + R+
Sbjct: 335 PQKIDWFMDAARA 347
>gi|288940235|ref|YP_003442475.1| Uroporphyrinogen decarboxylase (URO-D) [Allochromatium vinosum DSM
180]
gi|288895607|gb|ADC61443.1| Uroporphyrinogen decarboxylase (URO-D) [Allochromatium vinosum DSM
180]
Length = 368
Score = 81.0 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/344 (17%), Positives = 114/344 (33%), Gaps = 30/344 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M Q++L L + P++L P + R+ + + PE E
Sbjct: 23 MTSM-QRVLTALGQREPDRVPLFLF-------PVMQGARELGLSIEEYFARPEQVAEGQW 74
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPI--TTQEIYLLNPNIDLFL 117
+ + D F + +A G + F + P PI ++I L+
Sbjct: 75 RLRAKLGHDCLYNFHYAAIEIEAWGGSTLFRADGPPNAGAPIVRDPEDIRRLSVPRIEDS 134
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
L + + ++ ++ + +IG +P+++ + + + ++ F
Sbjct: 135 PSLQRVLTATRLMAEQARGEVPIIGVVMSPFSLPVMQLG------FERYLILMHERPDLF 188
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
L+ ++ AQ+ AG + I FD + + + I +
Sbjct: 189 ERLMQLNERFCVDWANAQVEAGANAICYFDPVSSTTITT--REFFLATGREIARRTLAQI 246
Query: 238 PNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL 294
+ FA +G +L L T + IG+ L Q + GNL+ + +
Sbjct: 247 KAPAAMHFA--SGRILPRVPDLLDTGAAVIGVSSHEDLGALKHAAQGRLSLLGNLNGIAM 304
Query: 295 VVG-NQVMIDGVNAILDVLG-SGPFIF--NLGHGITPQVDPKNV 334
+ V + G G FI N HG P P V
Sbjct: 305 RHWTPEQAESAVRDAIRAAGHGGGFILADN--HGEIPWQVPDAV 346
>gi|322806496|emb|CBZ04065.1| methylcobalamin:coenzyme M methyltransferase,methanol-specific
[Clostridium botulinum H04402 065]
Length = 356
Score = 81.0 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/302 (13%), Positives = 102/302 (33%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGVALGTQMSDPEDSVPAIMKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ +L K+ + P+T A+ + D +
Sbjct: 114 KLELKKDKAFQLHI-EACDVLIDKVEKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I G ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTGSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + + I +D V L + + + + P+
Sbjct: 226 DLMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCDMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + P +I G ++ V +N+ + + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKTCIQKTYDSPCGYILASGCDLSGGVPLENIDQFMASAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|331087312|ref|ZP_08336381.1| hypothetical protein HMPREF0987_02684 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408403|gb|EGG87874.1| hypothetical protein HMPREF0987_02684 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 345
Score = 80.7 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/317 (14%), Positives = 106/317 (33%), Gaps = 48/317 (15%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP-----ITTQ 104
PE ++ +++ +DA + + V +G +D + +
Sbjct: 45 QNPEVFALANVEVRKKFGYDANAV---------GCFQGVVEEMGKG-LIDKSGKVSVNGE 94
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKL------PNHITLIGFCGAP-WTVASYMISG 157
L +I+ Y + +S+ I+ +K+ ++ P + A+ M
Sbjct: 95 RTVLKEKDIEKLHAYNIDECESLRIMMEKVRFLKQMDPDCPVMAIADNPSMSAAAMMDGA 154
Query: 158 GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH-------A 210
F +N+ F L++ ++ A + AG D++
Sbjct: 155 NFYVSLIKNKKFVR---EVTELLMEPIAQSVARL----VEAGCDIV-----WLPMPTLGG 202
Query: 211 GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
C+ + + + I +R+ AK I G + ++A+ + +
Sbjct: 203 TCMSKKHYVESCLPYNKQFIEKIRKT--GAKIILHTCGNWNDRFDVASKEGADALHVSEA 260
Query: 271 VPLSFALELQKEGPVQGNLDP----MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
+ E K+ + G + P M + +V + + L G FI + G+
Sbjct: 261 DLETLKKEYGKKIALMGQV-PAAFTMLMKSAEEVYQESLQQCLTAAEGGGFILSADCGLP 319
Query: 327 PQVDPKNVLDLVKTVRS 343
P+N+ +++ R
Sbjct: 320 GNTPPENMRAMIRAARE 336
>gi|83589290|ref|YP_429299.1| uroporphyrinogen decarboxylase [Moorella thermoacetica ATCC 39073]
gi|83572204|gb|ABC18756.1| Uroporphyrinogen decarboxylase (URO-D) [Moorella thermoacetica ATCC
39073]
Length = 343
Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 94/250 (37%), Gaps = 21/250 (8%)
Query: 79 VIADALGRNVRFVENEGPRMD-----PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKK 133
G + F + P ++ P ++I++ NP D + ++L I+++I K
Sbjct: 78 TEPSGFGCKINFYPDRTPTINHIINSPEEAEDIFVPNPQTDGLMPFVLNIYRNIEPKVKD 137
Query: 134 LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI 193
L I ++ P T+AS+++ + + + + LL + ++ +L
Sbjct: 138 LGRCIKVVA-ARGPLTIASHLM---GVTNFLIG---LKTDPANTHKLLKKTTTLAKNWLE 190
Query: 194 AQIH--AGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
AQ + V+ I + D G L + ++ +A + I A + K
Sbjct: 191 AQAEVLSEVEGIMVLDDIVGFLSQDDYLEFAHPYLKEIFDAFPQ---CIKMYHNDSDNIV 247
Query: 252 MLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLV--VGNQVMIDGVNAI 308
+ L+ N ++ + + + + GN+ P+ ++ ++ +
Sbjct: 248 CFSYLQDLS-INIFNFTHLQDIAKVRQLVGNKICLLGNIPPLDVLTNGTPDMVAEAAVNC 306
Query: 309 LDVLGSGPFI 318
L+ G+ I
Sbjct: 307 LNQHGNKAGI 316
>gi|154501094|ref|ZP_02039132.1| hypothetical protein BACCAP_04782 [Bacteroides capillosus ATCC
29799]
gi|150269922|gb|EDM97450.1| hypothetical protein BACCAP_04782 [Bacteroides capillosus ATCC
29799]
Length = 451
Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 59/353 (16%), Positives = 124/353 (35%), Gaps = 33/353 (9%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF---KNFLDMCYTPEYTVE 57
M + + + L+ P W+ P + + + + + V+
Sbjct: 1 MTPK-ELLFAALRHEKTPRAP-WV--------P-FAGVHAGLLIGADAAQVLTDEDMLVK 49
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPI-TTQEIYLLNPNID 114
L+ R Y D + D+ + A+ LG + + E P + P+ T +
Sbjct: 50 SLLEVNRLYRPDGQPVMFDLQLEAEILGCELTWKEGTLPSVSSHPLADTMTVPCRCKLPR 109
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L + ++ +++++ + L G P+T+A ++ + D Y +
Sbjct: 110 PDQGRLPIVLNAMRRMKREVGDTTALYGLICGPFTLAFHLRGNNLLMD-------MYDDE 162
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
+ LL + + + + AG+DVI + D + F + + + +R
Sbjct: 163 DYVSELLGYCMECGKRMIDYYVDAGMDVIAVVDPLVSQISSDHFTQFLSTPFTALFDYIR 222
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--GPVQGNLDP- 291
Y A F G T+ ++I +D +V + A + + GN+ P
Sbjct: 223 --YRGAFSSFFVCGNATPNIEVMCQTNPDSIFVDENVDIIAAKATTDKYNVAIGGNI-PL 279
Query: 292 --MRLVVGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ L Q + V +L L FI G + V +N + + + V
Sbjct: 280 TTVMLHGTQQDNMKYVVDLLAKLPEYRNFIVAPGCDMPYGVPVENAIGVAQAV 332
>gi|218533528|ref|YP_002424343.1| methyltransferase MtaA/CmuA family [Methylobacterium
chloromethanicum CM4]
gi|4538621|emb|CAB39403.1| CmuA protein [Methylobacterium chloromethanicum]
gi|218525831|gb|ACK86415.1| methyltransferase MtaA/CmuA family [Methylobacterium
chloromethanicum CM4]
Length = 617
Score = 79.1 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/319 (12%), Positives = 100/319 (31%), Gaps = 21/319 (6%)
Query: 36 RQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALG-RNVRFVENE 94
R IR+ E + + + ++ D I +D+ + + + ++ +
Sbjct: 36 RGIREGGITVDQALRDGEASAHAKAKALEKFGGDVIIAGTDLFTPVECVDGCELDYLPHA 95
Query: 95 GPRM--DPITTQEI-----YLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGA 146
P + P +E + +L I ++ ++++ + + G
Sbjct: 96 QPSLVRHPTPNREAFYRFKEKYEREGFKPSDRVLQIMKEAQTMIKLGYKDTHVIPTPVGG 155
Query: 147 PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF 206
P T A M + ++ + + DV +G+DV I
Sbjct: 156 PITTAQLMTGSSEFLSYL------SEDPEYALEVTELALDVVKNVCRLMFESGIDVCNIL 209
Query: 207 DTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
D + L + + R+ + ++ + F + ++ N
Sbjct: 210 DPFNSSDILPPEVYRKHGLPFQKRLFAYIK-EIGGIGFTHTCTFTQPIWRDIAENGCLNF 268
Query: 265 IGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNL 321
G + + + + G L P + + + V + +G +G FI
Sbjct: 269 NGDMYPGMEHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANEVKKLAAEVGYNGGFICMP 328
Query: 322 GHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 329 GCDIDWTIPDENLKAMIDT 347
>gi|13752775|gb|AAK01357.2|AF307143_1 methyltransferase/corrinoid CmuA [Aminobacter ciceronei]
Length = 567
Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/355 (12%), Positives = 104/355 (29%), Gaps = 31/355 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R++ V + + P+ LM R IR+ ++ E
Sbjct: 7 MTSRERVFAAVTMQGLPDQVPVVPLLMT---------RGIREGGVRVDEVLLDGEAQAHA 57
Query: 59 TLQPIRRYNFDAAILFSDILVIADALG-RNVRFVENEGPRM--DPITTQEI-----YLLN 110
+ + ++ D I +D+ + + + ++ P + P T++
Sbjct: 58 KKKSLDKFGGDVIIAGTDLFTPVECVDGCELDYLPYAQPSLVTHPTPTRDAFYRFKEKYE 117
Query: 111 PNIDLFLNYLLPIFQSISILRKK-LPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+L I + K L + + G P T A M
Sbjct: 118 KEGFKPSKRVLAIQEEGRTYVKMGLKDTHAIPTPVGGPITTAQLMTGSSEFLT------L 171
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVG 227
++ + + D+ +G+DV I D + L + +
Sbjct: 172 LSEDPEYALEVTELALDIVKNVCRLMFESGIDVCNILDPFNSSDILPPEVYRKHGLPFQK 231
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
R+ + F + ++ N G + + + + G
Sbjct: 232 RLFDYINNDLKGIGFTHTCTFTQPIWRDIASNGCFNFNGDMYPGMDKAKQAIGGQISLMG 291
Query: 288 NLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
L P + + + + V + +G +G I G I + +N+ +++
Sbjct: 292 TLSPYSTLMHGSTEAVRNEVKKLAAEVGYNGGLIVMPGCDIDWNIPEENLHAMIQ 346
>gi|293401705|ref|ZP_06645847.1| methyltransferase, MtaA/CmuA family [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304963|gb|EFE46210.1| methyltransferase, MtaA/CmuA family [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 458
Score = 78.7 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 105/309 (33%), Gaps = 21/309 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI 106
++ + + VE + Y+ D + D+ + A+ALG + + E G + T
Sbjct: 40 EILHDADKLVEALMSVNTYYHPDGQPVIFDLQLEAEALGCELYWDEG-GKVPPTVRTHPF 98
Query: 107 YLLNPNI------DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ +++ +++ + H L G P T+AS++
Sbjct: 99 ENEKKIPCRCMIPKEEDGRFPIVLKAMRKMKELVSEHTALYGLICGPLTLASHLRGQMLF 158
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFEN 220
D Y + + L+ F +V A + G+D+I D + E
Sbjct: 159 MD-------MYDDVDYVHKLIAFCKEVCASVAQMYLQNGMDIIGYVDPLLSQISSEHIEM 211
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
+ + ++ + F G + + +D +V + AL +
Sbjct: 212 FLLDVYAELFQHLKTGH--VPSCLFVCGDATANLEVLCRMKPDCLSVDENVCMKDALAVC 269
Query: 281 K--EGPVQGN--LDPMRLVVGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVL 335
+ + + GN L L +Q + V I++ G+ I + G + V +N +
Sbjct: 270 RKYDVVLGGNIQLTITMLHGSSQDNMKAVIDIIEQCEGTDDLIISPGCDMPFDVPVENGI 329
Query: 336 DLVKTVRSE 344
+ V
Sbjct: 330 ACYQAVTDY 338
>gi|182414702|ref|YP_001819768.1| uroporphyrinogen decarboxylase [Opitutus terrae PB90-1]
gi|177841916|gb|ACB76168.1| Uroporphyrinogen decarboxylase (URO-D) [Opitutus terrae PB90-1]
Length = 354
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 98/291 (33%), Gaps = 31/291 (10%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDIL-VIADALGRNVRFVENEG---PRMDP--- 100
+ + L DA ++ D+ V A+A+G V F E + P + P
Sbjct: 49 ISRDGDLLTRAMLAEYAAIQPDALVVGVDVYNVEAEAVGSIVTFYEGKDTSIPGIKPEHH 108
Query: 101 -ITTQEIYLLNPNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
+ + + +P+ + +RK+L + L G P+++A ++
Sbjct: 109 IVEVGMDLSAARLPNPARDGRMPVNLAAARAVRKELGDDFWLRGAVSGPFSLAISLVGAE 168
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEH 216
+ + + LD+ S + E+ I AGV++I FD+ A L
Sbjct: 169 SL------FIACIEQPEWVRSCLDYASRIIREFAKGYIDAGVELIM-FDSQASPELLSPS 221
Query: 217 EFENYAARSVGRIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF 275
+E + ++ + + + I G + + T +N + D++
Sbjct: 222 MYEEFVLPVTQEFVAWAKTQGVRDLPLI--IGGNTTKIVDMLVQTGANNLLCDFTADFEE 279
Query: 276 ALELQKEGPVQG-----NLDPMRLV-VGNQVMIDGVNAILDVLGS-GPFIF 319
+ G N+ P L + + + ++ FI
Sbjct: 280 WSGAVRSA---GRAFRRNISPRLLEKAPAEEIYEVARREVERGRDIPGFIM 327
>gi|227529401|ref|ZP_03959450.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
gi|227350682|gb|EEJ40973.1| conserved hypothetical protein [Lactobacillus vaginalis ATCC 49540]
Length = 80
Score = 78.3 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDL 115
E+TLQP+RRY DAAILFSDIL + DA+G + F EGPR P+T + P D
Sbjct: 1 EVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDP 60
Query: 116 FLNYLLPIFQSISILRKKLPN 136
+ L + ++ +R++L
Sbjct: 61 E-DELGYVMNAVRTIRRELKG 80
>gi|158520079|ref|YP_001527949.1| uroporphyrinogen decarboxylase [Desulfococcus oleovorans Hxd3]
gi|158508905|gb|ABW65872.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfococcus oleovorans
Hxd3]
Length = 386
Score = 77.6 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 63/353 (17%), Positives = 122/353 (34%), Gaps = 29/353 (8%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++ L + + P+ + AG RQI F D E ++ +
Sbjct: 46 ERALTAFRHKEPDHVPVSPILCAGA-----RQISGI--TFPDYALDGEKAAKVFMDGYNF 98
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPR---MDPITTQEI--YLLNPNIDLFLNYL 120
DA +L D+ V A G+ + + N P +P+ T L +
Sbjct: 99 VGGDAVVLLLDLSVEAADFGQAIIYPLNSTPMPDYKNPVITHHDQYRALKSIRFSEAKRM 158
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ I+ +++ + GF P + + M + + R+ +
Sbjct: 159 QEFVKLCRIVVEEVGLRAIVSGFVFGPLGILAMMRGAENL--FKECRL----YPKEVMAA 212
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQI---FDTHAGCLGEHEFENYAARSVGRIISAVRRKY 237
D +++V E+++AQ AGV I I F + +G L + +E G I A++
Sbjct: 213 CDTITEVLVEFVLAQCEAGVPAIAIDTLFASRSG-LPKDLWEEIEGPFAGEISRAIKSTG 271
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL----QKEGPVQGNLD-PM 292
I A Y R + + + + E+ + G++ P+
Sbjct: 272 RIV-AIHNCGDAPYFDAQIRSMDPALINFSELPDDCASRREMKEKYGDRITLMGHVPTPL 330
Query: 293 RLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ Q +ID +D L G +I + G P + N L+ ++
Sbjct: 331 LVHGSPQEVIDECRRHIDDLAPGGGYILSPGCEYPPNISLVNAFALIHAAKTH 383
>gi|257064647|ref|YP_003144319.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
gi|256792300|gb|ACV22970.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
Length = 373
Score = 77.6 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/295 (17%), Positives = 106/295 (35%), Gaps = 25/295 (8%)
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN---YL 120
+ + + A+G + F E G +D + T I L ++D L+ Y
Sbjct: 73 DEFGIVGLAAGQRLRTVGQAVGTKMFFPE-VG--IDRVETHAIQTLA-DLDKVLSVDPYT 128
Query: 121 LPIFQSISILRKKLPNHITLIGF---CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
P++Q+I + L + +G P+TVAS ++ + + ++ +A
Sbjct: 129 SPVYQAILERGRILKDEFPEMGIGTSVAGPFTVASTIMPIERLLRDTR------KHPQAV 182
Query: 178 NWLLDFLSDVS---AEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
LLDF S AE + G I + A L ++ ++ + ++I +
Sbjct: 183 RDLLDFAVYHSVAWAEMFAKEFGGGPCTICDPVSCADILSRKQYLEFSMPAQEKLIEGLT 242
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPM- 292
+ + + + L + +D L+ A + + + GN+ P+
Sbjct: 243 KALGRKPGLHICGKTNPLWDDMANL-KVASFSVDNRESLAEAKDRMGDKFALVGNVPPVD 301
Query: 293 -RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG--ITPQVDPKNVLDLVKTVRSE 344
L +I+ + P +NLG G + +N + + R+
Sbjct: 302 VMLKGSIDDVIESCKKCIRQGAESPLGYNLGTGCQVPIGTPRENFMAFIYAARTY 356
>gi|56684776|gb|AAW22509.1| CmuA [Aminobacter lissarensis]
Length = 619
Score = 77.2 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/321 (12%), Positives = 100/321 (31%), Gaps = 26/321 (8%)
Query: 36 RQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALG-RNVRFVENE 94
R I++ + + + +++ D I +D+ + + + ++
Sbjct: 37 RGIKEGGITVEKALRDGVASAQAKHKAQQKFGGDVIIAGTDLFTPVECVEGCELDYLPYA 96
Query: 95 GPRM--DPITTQEI-----YLLNPNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGA 146
P + P T++ +L I ++ +R + + G
Sbjct: 97 QPSLVKHPTPTKDAFYRYKEKYEREGFKPSARVLEIMKEAKEFVRLGYKDTHVIPTPVGG 156
Query: 147 PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF 206
P T A M + ++ + + + DV +G+DV I
Sbjct: 157 PITTAQLMTGSSEFLTYL------SEDPDYADEVSELALDVVKNVCRLMFESGIDVCNIL 210
Query: 207 DTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
D + L F + R+ + ++ I F + +R + S
Sbjct: 211 DPFNSSDILPPEVFRKHGLPYQKRLFEYIHKELGG---IGFTHTCTFTQPIWRDIAGSGT 267
Query: 265 IGLD---WSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
+ + + + + + G L P + + + + V + +G +G I
Sbjct: 268 MNFNGDMYPGMDKAKQAIGGQISLMGTLSPYSTLMHGTTEAVRNEVKKLAAEVGYNGGLI 327
Query: 319 FNLGHGITPQVDPKNVLDLVK 339
G I + +N+ +++
Sbjct: 328 VMPGCDIDWNIPDENLHAMIQ 348
>gi|164691173|dbj|BAF98769.1| unnamed protein product [Homo sapiens]
Length = 116
Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNIDLFLNYLLPIF 124
++ + + L ALG V V +GP +P+ ++ + ++ + L +F
Sbjct: 5 FSPTSLLYPRCFL-PLQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVF 63
Query: 125 QSISILRKKLPNHITLIGFCGAP 147
Q+I++ R++L + LIGF GAP
Sbjct: 64 QAITLTRQRLAGRVPLIGFAGAP 86
>gi|168185293|ref|ZP_02619957.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Bf]
gi|237795668|ref|YP_002863220.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
gi|182671658|gb|EDT83619.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Bf]
gi|229260871|gb|ACQ51904.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum Ba4 str. 657]
Length = 356
Score = 76.8 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 103/302 (34%), Gaps = 23/302 (7%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT------TQEIYLL 109
+ + R+ D ++ + + ALG + E+ P + T E+ +
Sbjct: 54 AKAQIACYERFGNDLTVIEYGLHGVGMALGTQMSDPEDSVPAIMKYTLDDLNNVHELDMS 113
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + L I ++ IL K+ + P+T A+ + D +
Sbjct: 114 KLELKKDKAFQLHI-EACDILIDKVGKEVPTGVLISGPFTAAASIYKTE---DLLRA--- 166
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
+N + L+ F ++ I ++ + D A L ++ +
Sbjct: 167 TRKNPEKLHQLVKFCTEGLKMICREFIKTDSLIL-LCDPIASGTILNPKKYLEFVLPYTI 225
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQ 286
++ + ++ + + + N I +D V L + + + + P+
Sbjct: 226 DLMKDIHDAKGTV-CYHICGDTTAIVGDMVK-SGCNMISVDNRVDLEYTKQVVGDKVPIL 283
Query: 287 GNLDP--MRLVVGNQVMIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDLVKTVR 342
GN+DP ++ + V + + P +I G ++ +V +N+ + + R
Sbjct: 284 GNVDPVGTLILGSTNDVDLAVKSCIQKTYDSPCGYILASGCDLSGRVPMENIDQFMASAR 343
Query: 343 SE 344
Sbjct: 344 KY 345
>gi|310830008|ref|YP_003962365.1| Uroporphyrinogen decarboxylase (URO-D) [Eubacterium limosum
KIST612]
gi|308741742|gb|ADO39402.1| Uroporphyrinogen decarboxylase (URO-D) [Eubacterium limosum
KIST612]
Length = 346
Score = 76.8 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 56/359 (15%), Positives = 113/359 (31%), Gaps = 32/359 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELT 59
MN R++ L LQ + P+ Y R+ N+ + + E
Sbjct: 1 MNSRERMTL-TLQHKEADHVPV--------YPLINSASRQTIGCNYEEWTKDADKCAESI 51
Query: 60 LQPIRRYNFDAAILFSDILVIA--DALGRNVRFVENEGPRMD--PITTQEIYLLNPNI-D 114
++ + D D+ V A + + P + + ++ Y P I
Sbjct: 52 IKATDLLDVDCICTLVDLSVEAADWGMKMIYYEDQAACPDHNDFFLKSENDYETLPVINP 111
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ + + L ++ F P + G ++ H +
Sbjct: 112 RETPRMSEMIRMTKKLVDARGETKPIVAFVFGPLGIL------GMLRGHDYMFMDLIMYP 165
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD---THAGCLGEHEFENYAARSVGRIIS 231
+ L ++D EY A I AG D I FD + + + ++++ + +
Sbjct: 166 EKVHKALRTITDTLKEYCRALIEAGADAIM-FDTLFSSKTIMRKEMWDDFEGPYIEELAE 224
Query: 232 AVRRKYPNAKFISFAKGAGYM---LKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQG 287
V I Y +K S D + E + + G
Sbjct: 225 LVHDAGKMV-MIHNCGDGIYFDVQIKRMHPELISFLYLPDDCESMEELKEKYGHQTTLLG 283
Query: 288 NLDP-MRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
++DP +V + +I +DV G F+ G Q+D ++ +V+ ++
Sbjct: 284 HIDPGELMVTSKEDLIKQCREQIDVYKKDGGFVLATGCEYPAQMDFEHAKTMVEVAKTY 342
>gi|213421412|ref|ZP_03354478.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 60
Score = 76.0 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQ 299
F KG G L+ T +A+GLDW+ ++ A + + +QGN+DP L
Sbjct: 2 PVTLFTKGGGQWLEAMAE-TGCDALGLDWTTDIADARRRVGHKVALQGNMDPSMLYAPPA 60
>gi|325261180|ref|ZP_08127918.1| putative methyltransferase MtaA/CmuA [Clostridium sp. D5]
gi|324032634|gb|EGB93911.1| putative methyltransferase MtaA/CmuA [Clostridium sp. D5]
Length = 341
Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 52/361 (14%), Positives = 102/361 (28%), Gaps = 50/361 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMC----YTPEYTV 56
MN +K+++L L+ ++ P R F+ M P +
Sbjct: 1 MN-KKERVLAALRREPVDRIP--------------RGELAIEPGFMAMYLADVEKPMSAL 45
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF 116
E + + FD + + ++ + T LL P ++
Sbjct: 46 EKEIYVRKDLGFDFINMHEFPKTLLGYADDGYPIYQSPYNDIFKETPHSFQLLKPALEDI 105
Query: 117 LNYLLPIFQSISILRKKL------PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+ +S+ L LI P + + + +
Sbjct: 106 EDVEEYQTADLSVATSHLLEFYENNTDFFLISQINGPVSALDWALG------MEDYMCYC 159
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI-----FDTHAGCLGEHEFENYAARS 225
+ L D + D + G + I I F+T L E A
Sbjct: 160 MTDPELVAKLADKIMDFEIGRAKMFLDKGAEAILITDDIAFNT-GLLLPPEAMETVAYPF 218
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS------FALEL 279
++I ++ Y + I + G Y+ + + D + P + E
Sbjct: 219 YKKVIREIKA-YKDVPVIFHSDG--YLYDVLQDIVDCGFDAIQSLQPSAGMDIERVKKEF 275
Query: 280 QKEGPVQGNLDPMRL--VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQ-VDPKNVLD 336
+ + GN+D L + + V + G FI + I V +N
Sbjct: 276 GDKLCLIGNVDLNYLLPFGTPEDVKKEVKDLAKKAGPDGFILST-CNILTDAVKVENAKA 334
Query: 337 L 337
+
Sbjct: 335 M 335
>gi|218671579|ref|ZP_03521249.1| uroporphyrinogen decarboxylase [Rhizobium etli GR56]
Length = 53
Score = 76.0 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 293 RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
R+V G + + +G++ IL LG GP IFNLGHGITPQ DP +V LV+ VR K
Sbjct: 1 RVVAGGRALEEGIDDILQHLGHGPLIFNLGHGITPQADPDHVRQLVERVRGAK 53
>gi|168334379|ref|ZP_02692563.1| Uroporphyrinogen decarboxylase (URO-D) [Epulopiscium sp. 'N.t.
morphotype B']
Length = 345
Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 56/363 (15%), Positives = 125/363 (34%), Gaps = 40/363 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLM-----RQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
MN ++I+ L+ + P++ + RQA N+ + +
Sbjct: 1 MNSM-ERIVATLEHRRADRVPVYPLINSVSRQA------------LGINYEEWTKDWKKC 47
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE--GPRMDP--ITTQEIYLLNP 111
+ ++ + D D+ V A G+ + + E++ P + + E Y
Sbjct: 48 ADAIIKTTEELDLDCISTLVDLSVEAADFGQEILYFEDKAACPNYNNRLLQDVEDYATLK 107
Query: 112 NID-LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
+D + + L +K + ++GF P + S + + +
Sbjct: 108 AVDPRKTPRMSEHIEMAKYLVEKKGKDVPIVGFVFGPLGILSML------RGQEDLFIEL 161
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT---HAGCLGEHEFENYAARSVG 227
+S + L ++ E+ A I GV+ I FDT A + E +E + +
Sbjct: 162 ITDSEEIHPALIEITKTLKEFCGALIDVGVNAIM-FDTLYASASIMSEAMWEEFEGGYIQ 220
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA----IGLDWSVPLSFALELQKEG 283
+ VR + + + Y R+ + I S + +
Sbjct: 221 ELSEYVRSRGCLV-MLHNCGQSSYFEAQINRMHPALISFLHIPFGCSSYEETKEKFGDQV 279
Query: 284 PVQGNLDP-MRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ G +DP + ++ + + ++D+LG G F+ G ++ +V+T
Sbjct: 280 VLMGTIDPGWLMTATDEQVCEKSKEMIDILGKDGGFVLATGCEYPACLNXDKAKVMVETA 339
Query: 342 RSE 344
++
Sbjct: 340 KTY 342
>gi|168333575|ref|ZP_02691840.1| Uroporphyrinogen decarboxylase (URO-D) [Epulopiscium sp. 'N.t.
morphotype B']
Length = 344
Score = 75.7 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 99/257 (38%), Gaps = 17/257 (6%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPI--FQSISILRKKLPNHITLIGFCGAPWTVASY 153
P + + + + ++ I+ L + + I +L+K + ++G P+TVA
Sbjct: 96 PPLKTLDEIKNFSVDELINQALADDEFVAGLKLIPLLKKHYGDERVIVGVSWGPFTVAGM 155
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAG 211
M+ Y + + +++F + + A + + G DVI + D +
Sbjct: 156 MVGVQNFLTQA------YDDEDSAVAIIEFSTQLIARFAQLLVEYGADVIMVGDPVSSGD 209
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV 271
+ FE YA SV +++A+ + + +K + A +D ++
Sbjct: 210 MISPGMFEEYALPSVTGMVAALNKLNVK-YLLHICGNTRARIKPLLD-SGIAAFSVD-TL 266
Query: 272 PLSFALEL-QKEGPVQGNLDPMRLV---VGNQVMIDGVNAILDVLGSGPFIFNLGHGITP 327
L AL L + + G+++P ++ ++V + SG F+ G + P
Sbjct: 267 NLEEALPLTRGNYAICGDMNPYDVLQIKTADEVFEHCLGRAKVAGRSGGFLLMPGCDLAP 326
Query: 328 QVDPKNVLDLVKTVRSE 344
+ N+ +V S
Sbjct: 327 NIPLANIQAMVNAAHSF 343
>gi|261221115|ref|ZP_05935396.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
gi|260919699|gb|EEX86352.1| uroporphyrinogen decarboxylase [Brucella ceti B1/94]
Length = 55
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 292 MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
MR+V G + +GV+AIL+ +G GP +FNLGHGITPQ +NV ++ VR K
Sbjct: 1 MRVVAGGNALDEGVDAILERMGQGPLVFNLGHGITPQAPIENVQRMIDRVRGGK 54
>gi|330893317|gb|EGH25978.1| uroporphyrinogen decarboxylase [Pseudomonas syringae pv. mori
str. 301020]
Length = 41
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRK 40
+ + L L ++ P+W+MRQAGRYLPEYR R
Sbjct: 5 KNDRFLRALLKQPVDVTPVWMMRQAGRYLPEYRASRA 41
>gi|310657406|ref|YP_003935127.1| methyltransferase [Clostridium sticklandii DSM 519]
gi|308824184|emb|CBH20222.1| putative Methyltransferase [Clostridium sticklandii]
Length = 355
Score = 74.9 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 57/371 (15%), Positives = 118/371 (31%), Gaps = 56/371 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI---WLMRQAGRYL-----PEYRQIRKKFKNFLDMCYTP 52
M+ +++ +++ I+ P+ + A Y+ EY FL+ P
Sbjct: 6 MSS-NERMKKLIAREKIDRVPVNPLVSLYAA--YITNMNAKEY---------FLE----P 49
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRN----VRFVENEGPRMDPITTQEIYL 108
E +E L + +DA ++ I D G + + ++ + +T + I
Sbjct: 50 EKAMEAQLLARELHGYDAGPSYN----IPDGNGWDFGGLIEIPDSPRITLPKLTKRAIKS 105
Query: 109 LNPNIDLFLNYLLPIFQSISILR-KKLPNHI---TLIGFCGAPWTVASYMISGGFIKDHG 164
N L + + LR +L ++ G+P +A ++
Sbjct: 106 SNEVEKLKVPNPMTAPAMSRYLRFGELSVEKGFSSVTVGAGSPMGIAESIVGA------E 159
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTH---AGCL-GEHEFE 219
+ + + LL +D E + G + F T+ L FE
Sbjct: 160 LLLRWIRKEPSLVHRLLRIATDYILEVGQIYVNKFGSENCSAFSTYPMECHELMSPKMFE 219
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR---RLTDSNAIGLDWSVP-LSF 275
Y+ V I I L +++ +L + L
Sbjct: 220 EYSLPYVKEIHEKFINMGIKKWTIHLCGDHTKNLIHWQENIKLVPRTIFTPGHEMDILKT 279
Query: 276 ALELQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLG--SGPFIFNLGHGITP-QVDP 331
L ++ + GN+ + + + + I++ + G FI + P P
Sbjct: 280 GKALGEDYVIGGNVHTTLMQIGSARDVYKASKEIIEKMKYHPGGFILTPDC-VLPSHTPP 338
Query: 332 KNVLDLVKTVR 342
NV ++K +
Sbjct: 339 ANVHAMIKACK 349
>gi|150015595|ref|YP_001307849.1| uroporphyrinogen decarboxylase [Clostridium beijerinckii NCIMB
8052]
gi|149902060|gb|ABR32893.1| Uroporphyrinogen decarboxylase (URO-D) [Clostridium beijerinckii
NCIMB 8052]
Length = 347
Score = 74.5 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/335 (17%), Positives = 123/335 (36%), Gaps = 30/335 (8%)
Query: 1 MNERK---QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M +R +++L + + + P++LM Y ++ I KN+ PE +
Sbjct: 1 MEKRHTSMERVLTTMSKHEPDKVPLFLM--CTHYCAKFLDI--SIKNYFS---KPENVAK 53
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQ--EIYLLNPNID 114
+ +R++N D F A G V F E P +PI +I L P
Sbjct: 54 GQMMLLRKFNNDCLNPFYSAAHEYAAFGSEVIFNEAGPPNAGEPIIKNFDDILKLQPPDV 113
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L ++ISIL++++ + + G +P+++ + + Y+
Sbjct: 114 KNSKILRNCLETISILKEEVGMSVPIAGGVLSPFSLPILQMG------FDKYIELIYEKP 167
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH--AGCLGEHEFENYAARSVGRIISA 232
L+ E+ Q+ AG I D+ + + + + S R I
Sbjct: 168 ELLEHLIKINERFCTEWANMQLAAGASFITTIDSMSVSSIIPKSIYLKTGFLSAKRTIPT 227
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDP 291
++ + + + + +L+ + AI + + L+ ++ + + GNL+
Sbjct: 228 IKS---DVAIATSSASSSSILEEILE-SGIKAILVSHTDDLAEIKKKVGQRATLLGNLNG 283
Query: 292 MRLVVGNQ-VMIDGVNAILDVLG-SGPFIF--NLG 322
+ + + V + G G FI +LG
Sbjct: 284 IEMCRWTRFDAEYNVKEAIRKAGVGGGFILCDSLG 318
>gi|224368529|ref|YP_002602692.1| HemE [Desulfobacterium autotrophicum HRM2]
gi|223691245|gb|ACN14528.1| HemE [Desulfobacterium autotrophicum HRM2]
Length = 358
Score = 74.1 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 52/374 (13%), Positives = 117/374 (31%), Gaps = 58/374 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLM-----RQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M+ +++L + G + P+ + R G Y +F + E
Sbjct: 4 MSSM-ERVLATISGEETDRVPVCSLAVGVTRMTGGY------------SFPEFSMDSEAA 50
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN------------EGPRMDPITT 103
E + R D + F+D+ V A G+ + + + +GP
Sbjct: 51 AESMILANRLIGDDIILCFTDLSVEAADFGQKIIYPNHTTAYPDYGDMLIKGP------- 103
Query: 104 QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
++ L + L +L + + ++GF P V G ++
Sbjct: 104 EDYERLEIFSADQGQRMGTFLDLCDKLVTRLGSEVPILGFVYGPLGVL------GMLRGM 157
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD----THAGCLGEHEFE 219
+ + L+ +++V +++ Q GV + I D + +G +E
Sbjct: 158 ENLYLDLLEYPEKVKVALETITEVLVDFVRCQFRRGVAGVCI-DTLPASRSGV-SPRIWE 215
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL----DWSVPLSF 275
+ +I + G + R+ D + + ++
Sbjct: 216 EFEGIYAKKIRDEIVAH--GVLNAHHGCGFSPYFREVRKWLDPAVLSFAEVPEGCKDMAE 273
Query: 276 AL-ELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPK 332
A E + + G + L + V+ + ++ I + +G FI P +
Sbjct: 274 AKEEYGHDAILMGYVPTGLLYTGTPSDVIEESLHEIDTLGRNGNFILAPTCEFPPNGNIL 333
Query: 333 NVLDLVKTVRSEKI 346
N +V + +
Sbjct: 334 NARAMVTAAQMYPV 347
>gi|148655024|ref|YP_001275229.1| uroporphyrinogen decarboxylase [Roseiflexus sp. RS-1]
gi|148567134|gb|ABQ89279.1| Uroporphyrinogen decarboxylase (URO-D) [Roseiflexus sp. RS-1]
Length = 328
Score = 73.3 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 62/356 (17%), Positives = 116/356 (32%), Gaps = 48/356 (13%)
Query: 3 ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
R++++ L+G ++ PP+ W R+ P + PE +
Sbjct: 2 TRRERLAAALRGEPVDRPPVALW------RHFP--------VDD-----QDPEQLAQSVA 42
Query: 61 QPIRRYNFDAA-ILFSDILVIADALGRNVRFVENEGP---RMDPITTQEIYLLNPNIDLF 116
Y++D S + D R V EG P++ + +D +
Sbjct: 43 AFQAHYDWDFVKFTPSSSFCVEDWGCRAVYRGRPEGTSDYVARPVSVPADWRRIEPLDPY 102
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L +I R+ + + L+ +P + A +I G + S
Sbjct: 103 AGALGAHLAAIRRARELIDPDVPLLATIFSPISQAKNLIGDGM-----EIVHLRRHRSDL 157
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH----AGCLGEHEFENYAARSVGRIISA 232
F+ L + +++ + ++ A + AG D IF A + E E+ + + RI+ A
Sbjct: 158 FHAL-EAITETTIRFVQAALAAGADG--IFYAMQRCTADVISEAEYRDVCSPLDLRILEA 214
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQG 287
V FI + + + A L+W L+ V G
Sbjct: 215 VHAAQRETTFILL--HLHGLYSYFDIAAEYPAQALNWHDRDTGPDLAEGARRFPGMVV-G 271
Query: 288 NLDPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP-KNVLDLVKTV 341
L +V + +D +G + G + P P N+ L V
Sbjct: 272 GLSQRDIVEGTPATIQTLARQAIDAMGGRRVCLSTGC-VMPTTAPWGNIRALRAAV 326
>gi|213580639|ref|ZP_03362465.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 52
Score = 73.3 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 300 VMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ D V IL G G +FNLGHGI V P++ V+ V
Sbjct: 1 RIEDEVATILAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAVH 44
>gi|309791725|ref|ZP_07686215.1| Uroporphyrinogen decarboxylase (URO-D) [Oscillochloris trichoides
DG6]
gi|308226218|gb|EFO79956.1| Uroporphyrinogen decarboxylase (URO-D) [Oscillochloris trichoides
DG6]
Length = 352
Score = 73.0 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/298 (17%), Positives = 99/298 (33%), Gaps = 31/298 (10%)
Query: 2 NERKQKILEVLQGNVINPPPIWL---MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
Q++L L + P++L M ++ ++ D EY V
Sbjct: 6 TSSLQRVLTTLSHQEPDRVPLFLLLTM----------HGAKELDRSIKDYFLHAEYMVAG 55
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDPITTQEIYLLNPNIDL-- 115
L+ +Y D FS + +A G V F ++ P +P + +L+ +
Sbjct: 56 QLRMAEKYQNDCFYAFSYAALEVEAWGGEVIFRDDGPPNAGEPFIRKAEQILSLEVPNIQ 115
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ L + ++IS L +I AP+++ + D ++
Sbjct: 116 DIPGLRRMLETISQLHAHNQGQRPIIAVAIAPFSLPVMQMGFEAYLD------LIHERPD 169
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISAV 233
LL + + AQ+ AG I F+ A + F A R+ +
Sbjct: 170 LLERLLQINEEFCVAWANAQLAAGATAICYFNPLASTTMVTPEMFRQLDAPLSRRMCRRI 229
Query: 234 RRKYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNL 289
N + FA G L + + +G+ L + + + + GNL
Sbjct: 230 -----NGPVALHFASGRCLPLMDDLADLGAAVVGVSMQEDLHQLKQKAKGKFSLLGNL 282
>gi|167950694|ref|ZP_02537768.1| Uroporphyrinogen decarboxylase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 88
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN--AKFISFAKGAGYMLKNYRRL 259
+ IFDT G L ++ ++ + RII + R+ I F KG G L+ R
Sbjct: 5 VMIFDTWGGALTPAAYQAFSLDYMQRIIQGLTREAEGRQVPVILFTKGGGLWLERMARE 63
>gi|283850535|ref|ZP_06367823.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfovibrio sp. FW1012B]
gi|283574106|gb|EFC22078.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfovibrio sp. FW1012B]
Length = 341
Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/328 (17%), Positives = 103/328 (31%), Gaps = 34/328 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN ++ ++G + R L Y + + + PE +
Sbjct: 1 MNSL-DRVFAAVRGEPADR------RAFSLVLSLYGA-KLTGCSLSEYYAKPEKYLAGQQ 52
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP-RMDP-----ITTQEIYLLNPNID 114
+ + D + + A A G +++ + P + P + +P D
Sbjct: 53 AVVDLVDPDILFTPFALPLEARAFGCGLQYFDTAPPNVIRPACKGLTDLAGLLAPDPATD 112
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L YL +S +L ++ + AP + + +++ G + +
Sbjct: 113 PGLRYL---VESTRLLSREFGGKKPIAALLTAPMDLPALLVTIG-----EWIEALLF-DP 163
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI---FDTHAGCLGEHEFENYAARSVGRIIS 231
A + LL SD A AG D + I F T+ L + + S
Sbjct: 164 EARDGLLRRSSDHFVGLATALFEAGADFVVIPAMF-TNPRLLTPQMVLDQIVPPLAEAFS 222
Query: 232 AVRRKYPNAKFISF-AKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QGNL 289
V P L +R+L LD + A +L E PV GNL
Sbjct: 223 RV----PGPIVFHHGGNPLASHLGLFRKLPHVVGFALDHRDSFAEARDLVGEIPVLLGNL 278
Query: 290 D-PMRLVVGNQVMIDGVNAILDVLGSGP 316
P + + AIL + + P
Sbjct: 279 SGPHLPGLSPEEAYARTCAILSTMAADP 306
>gi|71919825|gb|AAZ57160.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ AG+DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEAGIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + F + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYQKRLFAYI-TEIGGIGFTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + + + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANETKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|71919813|gb|AAZ57154.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ AG+DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEAGIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + F + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYQKRLFAYI-TEIGGIGFTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + + + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANETKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|71919817|gb|AAZ57156.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
gi|71919819|gb|AAZ57157.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
gi|71919821|gb|AAZ57158.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
gi|71919823|gb|AAZ57159.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 71.4 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ AG+DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEAGIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + F + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYQKRLFAYI-TEIGGIGFTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + + + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANETKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|71919815|gb|AAZ57155.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 71.0 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ AG+DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEAGIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYQKRLFAYI-TEIGGIGLTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + + + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANETKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|289424050|ref|ZP_06425836.1| putative methylcobalamin:Coenzyme M methyltransferase
[Peptostreptococcus anaerobius 653-L]
gi|289155475|gb|EFD04154.1| putative methylcobalamin:Coenzyme M methyltransferase
[Peptostreptococcus anaerobius 653-L]
Length = 354
Score = 71.0 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/320 (14%), Positives = 110/320 (34%), Gaps = 19/320 (5%)
Query: 37 QIRKKF--KNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE 94
+I+ ++ KN + + V + ++ +D + + IA+A+G + EN
Sbjct: 37 EIKARYIGKNTREYWLNEDNLVNADIAAFNKFGYDGMGVGPNAYGIAEAIGIEANYPENG 96
Query: 95 GPRMDP--ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
+ I + I L L+ + + S LR+ + P T+A
Sbjct: 97 LITVKKLAIDNLDDVNNMDIIKLSSGNLMTYYNATSRLREIGDGICPVGASLSGPLTLAG 156
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG- 211
+ + + + LL+++ + + G+ D A
Sbjct: 157 FCYGTD-----RLLKAMI-KYPDKVDRLLEYIVECVKLVIDEFSKIGISFSMA-DPIAST 209
Query: 212 -CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
+ ++ + I + + + + G + Y + + + +D
Sbjct: 210 TMISPKMYKRFVYGPTQEICNYLMKVNNSKPSYHVC-GNTKKIWTYIKDINFSMFSIDNE 268
Query: 271 VPLSFALELQKEG-PVQGNLDPMRLV--VGNQVMIDGV-NAILDVLG-SGPFIFNLGHGI 325
+ + A E + P+ GN+DP++++ +++ D V ++I+ FI G +
Sbjct: 269 MNIHEACEYFSDYLPIAGNVDPVKIISKGDKKMIEDAVIDSIMAGKKCKKGFILTPGCNL 328
Query: 326 TPQVDPKNVLDLVKTVRSEK 345
+N+ + R
Sbjct: 329 PLYTSDENIEIFMDAGRKYS 348
>gi|218782028|ref|YP_002433346.1| uroporphyrinogen decarboxylase (URO-D) [Desulfatibacillum
alkenivorans AK-01]
gi|218763412|gb|ACL05878.1| Putative corrinoid enzyme (methylcobamide:CoM
methyltransferase-related protein) [Desulfatibacillum
alkenivorans AK-01]
Length = 382
Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 61/360 (16%), Positives = 119/360 (33%), Gaps = 49/360 (13%)
Query: 6 QKILEVLQGNVINPPPIW-LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIR 64
+++L ++ + P+ L+ A R R +F D E E+ +
Sbjct: 46 ERVLTAVRHKEPDRIPVAPLVNAAAR--------RILGVSFPDYSLKAESAAEVFTASVD 97
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
D +L D+ V A G+ + + P L ++D + F
Sbjct: 98 FVGADFIVLLLDLSVEAADFGQEMVY-----PLDSTARPNYDNPLIKDVDGYAKIRPVPF 152
Query: 125 QS----------ISILRKKLPNHITLIGFCGAPWTVASYMISGGF-IKDHGQNRVFAYQN 173
+ I+ +++ GF P V S M KD +
Sbjct: 153 EKSVRMKEQVRLCKIMAERVGLGTMAGGFVFGPLGVLSMMRGAEALFKD-------CLNH 205
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI---FDTHAGCLGEHEFENYAARSVGRII 230
+ + +++ E+ AQ AG+ + I + + L + +E G+I
Sbjct: 206 PKKVMAACEAVTETLVEFAQAQCEAGMPAVAIDTLYASW-NALPKKVWEEIEGPFAGQIA 264
Query: 231 SAVRRKYPNAKFISFAKGAGYM--LKNYRRLTDSNAIGL-----DWSVPLSFALELQKEG 283
A+R K G+ + D++ + D + P + +
Sbjct: 265 QAIRDKGGLVGV----HNCGHAPYFDVQTKAMDASIMSFAHLPDDCATPREMKEKYGDQL 320
Query: 284 PVQGNLD-PMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ G + P+ + Q ++D +DVLG G FI G P + + ++K V
Sbjct: 321 TLIGYVPTPLLVHGTPQQIMDECRRQIDVLGRDGGFILAPGCEYPPNIPLDSAFAMIKAV 380
>gi|20089731|ref|NP_615806.1| methyltransferase [Methanosarcina acetivorans C2A]
gi|19914664|gb|AAM04286.1| methyltransferase [Methanosarcina acetivorans C2A]
Length = 393
Score = 70.3 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/369 (14%), Positives = 120/369 (32%), Gaps = 48/369 (13%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLP--EYRQIRKKFKNFLDMCYTPEYT 55
M R +++ V+ G + P+ P E + + D +
Sbjct: 36 MASRMTSPERMAAVISGQKPDRIPVV---------PFIEGYAAQITGISLGDFYADGDKC 86
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG---PRM--DPITTQEI--YL 108
E +R + ++ ++ A G + F +G P + P+ T E L
Sbjct: 87 FEAQFASMRLHGYEQTPMYGYASCGAWEFGGEIGFPYGKGQGAPYVKKHPVETIEDIDKL 146
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P+ L I ++ +L + G+ +T AS + D +
Sbjct: 147 EVPDFGRELPGAYKIADRVATRCVELG--MPATVQIGSIFTAASVVA------DTSEFLA 198
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG------CLGEHEFENY 221
+ +A + LLD +S++ L G + + FD G + FE +
Sbjct: 199 WLIMEPKAVHRLLDKVSEMFVNALDYFADKYGSESLLPFD--GGPSESNNMISPQMFEEF 256
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL------TDSNAIGLDWSVPLSF 275
A + ++ + V+ +A + + Y +L P+
Sbjct: 257 AYPYMKKVHTRVKELGIHAVLMHPCANQNLNIPYYVKLREEMNWAGKYLWLFGPETPIKD 316
Query: 276 ALELQKEGPVQ-GNLDPMRLVVGN-QVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDP 331
++ + V GN++P + + + +++ ++ ++ + G P
Sbjct: 317 QIKAFGDHDVICGNINPPLFLTNSYEELLEICRRNIEEGINSPSGYVLSPGCEFPVNAAP 376
Query: 332 KNVLDLVKT 340
V+ +V
Sbjct: 377 VKVMAMVDA 385
>gi|71919811|gb|AAZ57153.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ AG+DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEAGIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + F + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYRKRLFAYI-TEIGGIGFTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + + + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANETKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|167759799|ref|ZP_02431926.1| hypothetical protein CLOSCI_02162 [Clostridium scindens ATCC 35704]
gi|167662418|gb|EDS06548.1| hypothetical protein CLOSCI_02162 [Clostridium scindens ATCC 35704]
Length = 382
Score = 69.9 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 79/234 (33%), Gaps = 18/234 (7%)
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF-IKDHGQNRVFAYQNSRAFN 178
L PI +S L+ + P+ +++ P + A + +KD +N +
Sbjct: 142 LAPILESAKRLKDRFPD-VSMTTSVAGPISTAIAVRPVEMVLKD-------TRKNPEMLH 193
Query: 179 WLLDFLSDVSAEYLIA-QIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRIISAVRR 235
LLD + S + A + G D T + + +F+ Y+ + ++I +
Sbjct: 194 KLLDLTVECSLRWFEAFRREFGPVGTNFSDPVTCMDVISKKQFDEYSLPYIKKLIDGTEK 253
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL 294
+ + + + +D L A + + + GN+ P+ +
Sbjct: 254 IMGSRPGAHICGKTSPIWGDLAD-AGLFSFSIDNCEDLKEAKDAVGDRMRIAGNVPPVDV 312
Query: 295 VVGN---QVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ +VM ++ + FI N G + NV + R
Sbjct: 313 MKEGTIDEVMESCRECLIKCADNPAGFILNTGCQLPIGTPKANVEAFIYAARKY 366
>gi|256545531|ref|ZP_05472891.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398742|gb|EEU12359.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 374
Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/225 (14%), Positives = 78/225 (34%), Gaps = 21/225 (9%)
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
+ ++K+ ++ + P T A+ + + + +N + LLDF +
Sbjct: 142 ARIQKERFPNMAIETEIPGPITTAAAI------RPIEKLLRDLRKNPQGVKELLDFCFEA 195
Query: 188 SAEYLIA-QIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISA---VRRKYPNAK 241
+ ++ A + G + + D L + + ++ + + +SA + N
Sbjct: 196 NMKWAKAFKKEFGPTSVMVVDPVGCDDILSPKQVKEFSLPYLKKQLSAYYELNGIKANLH 255
Query: 242 FISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA-LELQKEGPVQGNLDPMRL--VVGN 298
K K+ D + +D L E++ + V GN+ P+ +
Sbjct: 256 ICGHTKKQWKYFKDL----DIDFFSVDNCEDLEECKKEIEDKLIVVGNIPPVEVMRYGSI 311
Query: 299 QVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTV 341
+I+ V + +I G G + +N+ + +
Sbjct: 312 DDVIESVKTCIKKAADAKCGYIAATGCGSPVKTPIENLDAFIYAI 356
>gi|225163510|ref|ZP_03725823.1| uroporphyrinogen decarboxylase (URO-D) [Opitutaceae bacterium TAV2]
gi|224801886|gb|EEG20169.1| uroporphyrinogen decarboxylase (URO-D) [Opitutaceae bacterium TAV2]
Length = 365
Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 87/237 (36%), Gaps = 24/237 (10%)
Query: 111 PNIDLFLNYLLPI-FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P + + +P+ + +R+ L + + L G P+++A +
Sbjct: 131 PVPNPLKDGRMPVNIAAARNVRRALGDDLWLRGAVSGPFSLAISLAG-------ADTVFM 183
Query: 170 AY-QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSV 226
A + + +LD+ + EY A I AG ++ IFD+ A + FE + +
Sbjct: 184 ACLEEPEWVHAVLDYSGRIIREYAKAYIDAGAGLV-IFDSQASPDLIAPAMFEQFVLPEI 242
Query: 227 GRIIS-AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE--G 283
+++ A + + + + T +N + D++ + L++ +
Sbjct: 243 RKLVDWAASQGVRDVPLVIGGNTTP--IAELLAQTGANNLLSDFTTEVVPWLDVCRRYKR 300
Query: 284 PVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG---PFIFNLGHGITP-QVDPKNVLD 336
++ N+ P + I A+ + FI G G+ P +N+L
Sbjct: 301 ALRRNISPRLIETQTPDCI-HAQAVQEAWFHKEFPGFIV--GTGVIPYGTPSENILA 354
>gi|300855451|ref|YP_003780435.1| putative uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M
methyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300435566|gb|ADK15333.1| putative uroporphyrinogen decarboxylase/methylcobalamin:coenzyme M
methyltransferase [Clostridium ljungdahlii DSM 13528]
Length = 369
Score = 69.9 bits (170), Expect = 6e-10, Method: Composition-based stats.
Identities = 61/380 (16%), Positives = 112/380 (29%), Gaps = 64/380 (16%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT------ 55
NE ++I + + + PI M AG +L +R + E
Sbjct: 9 NEHLERIKKNIAMQKTDRTPI--MLHAGAFL-----LRYAGGKLCEFVTDNEAAEDKVVN 61
Query: 56 -------VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYL 108
++ + P+R S V L + ++ +E + +T ++ +
Sbjct: 62 SLKSIGDIDCVITPVRLPTTSGLAYLSASRVPGRELKDDAQWQIDE---IGKMTEEDYDV 118
Query: 109 LNPNID----------------LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVAS 152
+ + Y I I+ I G P+TV S
Sbjct: 119 IIDKGWNYFFKDFCEKNLKSSCDDMKYYGTIADKIAKKYTDAGCVILTTAVAGGPFTVFS 178
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLL-DFLSDVSAEYLIAQIH---------AGVDV 202
+ K + AF+ + D L+D L QI G
Sbjct: 179 --GARTIPKLMRDMHRMPEKVEAAFDAFMVDKLND-----LRKQIREKKPLAVFVGGGRG 231
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDS 262
F L +F+ Y + + + I + + N F + ++
Sbjct: 232 AGDF------LSMKDFDRYMWKYMKQNIDVILEEGSNIYFHLDLDWSRFLDYFLDVPKGR 285
Query: 263 NAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFN 320
D S + A E L G++ P L + + D ++D S F
Sbjct: 286 AIFHPDSSTDIFKAKELLGGRMAFMGDVAPSLLSLGTPDEVYDYSKKLVDEFSSQGFFMA 345
Query: 321 LGHGITPQVDPKNVLDLVKT 340
G + P P+NV ++
Sbjct: 346 AGCCVPPNSKPENVKAMIAA 365
>gi|317484932|ref|ZP_07943819.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316923808|gb|EFV45007.1| MtaA/CmuA family methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 353
Score = 69.1 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 128/355 (36%), Gaps = 31/355 (8%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M + +++ N ++ P+ ++ L E I ++ +F D+ + EL +
Sbjct: 5 MTSK-ERVKAAFAHNPVDRVPMMIL------LGETWMIEREKISFKDLREMDDLGAELIV 57
Query: 61 QPIRRYNFDAAIL-FSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNID----- 114
+ D+ + + +ALG + P ++ ++D
Sbjct: 58 RTYDEMQSDSVTTGLGCWIGLLEALGCPTEISKIGAPIEVKPCIHDVAADISSLDRSKIR 117
Query: 115 ---LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+ + + ++K + + ++ G P++ AS M+ +K+ +
Sbjct: 118 ERLENSELIQKMMRQSREIKKLVGDRKSVAGQMVGPFSGASMMV---GVKEF---MILLG 171
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYAARSVGRI 229
+ S LL++ +D AE G D+IQ D + + +E + ++ +
Sbjct: 172 KKSPYIKPLLEYATDCCAEIANMYCENGCDLIQTCDPCSSGDMISPKMYEQHVVPTLEGL 231
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-LQKEGPVQGN 288
S ++ + AG L + + L + +D V L +LE KE + GN
Sbjct: 232 TSQLK--NCETFLLHICGKAGMRLPHVKAL-GIDGFSVDSPVDLKESLEAAGKELTMVGN 288
Query: 289 LDPMRLV---VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+P L+ V G ++ G + + +N+L +V+
Sbjct: 289 FNPNELLCMGTSEAVYAAAYANAEIAGLDGGYVMMPGCDLAARTPLENILAMVRA 343
>gi|325264057|ref|ZP_08130789.1| hypothetical protein HMPREF0240_03061 [Clostridium sp. D5]
gi|324030541|gb|EGB91824.1| hypothetical protein HMPREF0240_03061 [Clostridium sp. D5]
Length = 349
Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/362 (16%), Positives = 114/362 (31%), Gaps = 38/362 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIW-LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
MN +++++ L + P++ ++ A R R N+ + + E
Sbjct: 1 MNAM-ERVVKALNHEEADRVPVYPIISGASR--------RLTGVNYKEWANDAQLCAEAL 51
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP------ITTQEIYLLNPNI 113
L+ + D + D+ V DA G+ + + ENE P I E Y +
Sbjct: 52 LKAREEFELDCIVTLIDLSVECDAWGQELIYPENE--AAHPNYDDCVIKDIEDYAKIKKV 109
Query: 114 D-LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW-TVASYMISGGFIKDHGQNRVFAY 171
D ++ + L + ++ F P T++ D Y
Sbjct: 110 DYRSSKRMMMHIDTCRKLVEASNGEFPVVAFVFGPLGTLSMLRSQQEMYMDF-------Y 162
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT---HAGCLGEHEFENYAARSVGR 228
+ A + +++ +Y A + GV+ I FDT + + ++ V
Sbjct: 163 DDPEAVHEAAGEINETLKDYCRALMDTGVNGIM-FDTLFASGSIMSKEMWDELEGDLVEE 221
Query: 229 IISAVRRKYPNAKFISFAKGAGYM---LKNYRRLTDSNAIGLDWSVPLSFALELQKEG-P 284
+ AVR K I Y + + S D E E
Sbjct: 222 LAEAVREKNGLV-MIHNCGQKIYFDVQIDRMQPAAISFLYPPDDCKDFKECKEKYGEVTT 280
Query: 285 VQGNLDP-MRLVVGNQVMIDGVNAILDVL-GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ G + P ++ ++ +D + G FI G D +V+ +
Sbjct: 281 LIGCVTPASAVIGTDESWDQECRDSIDAMAAGGGFILATGCEYPANADFARAHRMVEIAK 340
Query: 343 SE 344
Sbjct: 341 DY 342
>gi|302878848|ref|YP_003847412.1| Uroporphyrinogen decarboxylase (URO-D) [Gallionella
capsiferriformans ES-2]
gi|302581637|gb|ADL55648.1| Uroporphyrinogen decarboxylase (URO-D) [Gallionella
capsiferriformans ES-2]
Length = 563
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/357 (13%), Positives = 119/357 (33%), Gaps = 40/357 (11%)
Query: 6 QKILEVLQGNVINPPPIWL------MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
++L G +++ P++ R+ G + EY E+ E
Sbjct: 226 DRLLAAANGKILDHIPVFCNLLDQGARELGLSIEEY-------------FSKGEHVAEAQ 272
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRN-VRFVENEGP-RMDPITTQEIYLLNPNIDLFL 117
L+ + ++ D + A+ G +R+ + P D I + N + +
Sbjct: 273 LKMLEKFGHDNVWSLFYVGREAELFGCKKIRYATDGPPNVEDYIIQSYEDIANLQVPDDI 332
Query: 118 NYLLPIFQS---ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ ++ + IL++++ + + + A ++ + ++S + +
Sbjct: 333 STHPAFAETAKCLEILKREVGGKVPICAYLTASMSLPAILMSME-----KWMELLMIGDP 387
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVGRIISA 232
+ LL+ SD + + A AG DV+ D + + F+ + + + R +
Sbjct: 388 AVRDMLLEKCSDFFRKEIEAYRRAGADVLVYADPYGSTDIIPMKLFKELSLKWIKRDLE- 446
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPV-QG--NL 289
+ ++ R ++ ++ L + + G N
Sbjct: 447 -PGGLDGVVYYVGGARLNSVVDEVIREVGITTYYPGPLDNITDSMRLIGDRALCAGVIN- 504
Query: 290 DPMRLVVGNQVMIDGVNAILD-VLGSGPFIFNLGHGITP-QVDPKNVLDLVKTVRSE 344
D L + V I+ L G +F G + P + +N+ ++ +
Sbjct: 505 DIKLLDWTPDEVRSEVKRIVQGGLAEGKKLF-FGTVVMPYGIPEENIKAMIAAAKEY 560
>gi|304439451|ref|ZP_07399360.1| possible uroporphyrinogen decarboxylase [Peptoniphilus duerdenii
ATCC BAA-1640]
gi|304372047|gb|EFM25644.1| possible uroporphyrinogen decarboxylase [Peptoniphilus duerdenii
ATCC BAA-1640]
Length = 341
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/338 (12%), Positives = 108/338 (31%), Gaps = 43/338 (12%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
++++++ L+G + PPI +++F + P + L+
Sbjct: 2 TKRERVMATLRGEKTDRPPI-----------------TAYRHFPKVEREPRDLANIMLKW 44
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+ Y++D + + + +A G + +V E + + ++ L+
Sbjct: 45 QKDYDWDIVKVHPSAVYMQEAYGDKIDYVNYEQEIFPTKLSSAAKGYDLSVFKILDMTNQ 104
Query: 123 IF----QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN--------RVFA 170
+ ++I ++R L + ++ P + S + F++ H ++
Sbjct: 105 VLKDHVEAIKLIRDGLDEDVPILQTVFTPLQIVSGVFDLPFVRRHFPADREENPIFKIME 164
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD-THA--GCLGEHEFENYAARSVG 227
L D +++ Y A G D + + A + E+E + R
Sbjct: 165 EHEEELLKAL-DNITETYINYWKALKEVGCDGFFLAGISWARTDYMKFEEWEKFVKRFDV 223
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW----SVPLSFALELQKEG 283
+ AV+ I + + + + + D + + A +
Sbjct: 224 KFSQAVKNDGG---IIMYHTCGIKSNPDRFKDFPIDILHWDQGAEDNPSIKEASAYLGKI 280
Query: 284 PVQGNLDPMRLVV--GNQVMIDGVNAILDVLGSGPFIF 319
G +D + + + ++ PFI
Sbjct: 281 TPMGGVD-EMIFGNNSEEEIARQAKKAIEENKDIPFIL 317
>gi|306828834|ref|ZP_07462026.1| clan AA aspartic protease [Streptococcus mitis ATCC 6249]
gi|304429012|gb|EFM32100.1| clan AA aspartic protease [Streptococcus mitis ATCC 6249]
Length = 332
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 103/337 (30%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+K+ +L+ +G ++ P+ + + F P E +
Sbjct: 1 MSEKKEWVLKAFRGEKVDRVPVGF-------WHHFTSEDEWLHGF----SNPAII-EKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P + ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQP-LGPDHAWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ A +
Sbjct: 101 KEQVDLVKKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPEALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIEEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|207111362|ref|ZP_03245524.1| uroporphyrinogen decarboxylase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 46
Score = 67.9 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDI 77
L EY++ RKK +FL++C + E+TLQP+ DAAILFSDI
Sbjct: 1 LSEYQESRKKTGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDI 46
>gi|331267080|ref|YP_004326710.1| uroporphyrinogen decarboxylase [Streptococcus oralis Uo5]
gi|326683752|emb|CBZ01370.1| uroporphyrinogen decarboxylase [Streptococcus oralis Uo5]
Length = 332
Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 103/337 (30%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+K+ +L+ +G + P+ + + F P +E +
Sbjct: 1 MSEKKEWVLKAFRGEKVERVPVGF-------WHHFTSEDEWLHGF----SNP-VIIEKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P + ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQP-LGTDHAWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ A +
Sbjct: 101 KEQVDLVKKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPEALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIEEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|270292045|ref|ZP_06198260.1| conserved hypothetical protein [Streptococcus sp. M143]
gi|270279573|gb|EFA25415.1| conserved hypothetical protein [Streptococcus sp. M143]
Length = 332
Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 106/337 (31%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+++ +L+ +G ++ P+ + + F P +E +
Sbjct: 1 MSEKREWVLKAFKGEKVDRVPVGF-------WHHFTSEDEWLHGF----SNP-VIIEKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P + ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQP-LGPDHAWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ +A +
Sbjct: 101 KEQVDLVKKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLMEDPKALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ + V
Sbjct: 160 LDVIAEDIASLSRAVIKEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEVA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|331003697|ref|ZP_08327191.1| hypothetical protein HMPREF0491_02053 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412080|gb|EGG91475.1| hypothetical protein HMPREF0491_02053 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 350
Score = 67.6 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/293 (13%), Positives = 98/293 (33%), Gaps = 19/293 (6%)
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMD--PITTQEIYLLNPNIDLFLNYL 120
+ R+ D + ++ IA+A+G + + E+ + PI + + +I +
Sbjct: 65 MNRFGLDIMDVGPNLYGIAEAMGAVLHYPEHGYISIKNRPIYSMDEVSKLKDITKDSGRM 124
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + + LR+ + P T+A ++ + V + +
Sbjct: 125 AMYYNANAKLREIADGFCRVCTSLSGPITLAGLLL---GTDNLLGEMV---SSPDKVHIF 178
Query: 181 LDFLSDVSAEYLIAQIHAGVDV-IQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKY 237
L ++++ + I AG+D+ + D A + + +A I S +R K
Sbjct: 179 LRYITENIKYVVD--IFAGLDIDFAMADPIASCTVISPQMYLEFAYPYTLEISSYIREKS 236
Query: 238 PNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLV- 295
A + K Y + D +D + + + + + GN+D + ++
Sbjct: 237 GKALTYHVCGNTKQVWK-YIKNLDIGIFSIDNKMDIDETCDFFSDSNRIAGNVDSVSIIC 295
Query: 296 -VGNQVMIDGVNAILDVLG--SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
+ + V + FI G + + + + R
Sbjct: 296 HGTKNDIENEVKRCIRAGRKCKKGFILTPGCNLPLNTTDEKIDMFLDAGRKYS 348
>gi|71919809|gb|AAZ57152.1| methyltransferase/corrinoid binding protein [uncultured bacterium]
Length = 445
Score = 67.2 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/202 (13%), Positives = 59/202 (29%), Gaps = 12/202 (5%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI 203
G P T A M + ++ + + D+ A +DV
Sbjct: 69 VGGPITTAQLMTGSSEFLTYL------SEDPDYAKEVTELALDIVKNVCRMMFEADIDVC 122
Query: 204 QIFDTH--AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD 261
I D L + + R+ + + + F + ++
Sbjct: 123 NILDPFNSTDILPPDTYREFGLPYQKRLFAYI-TEIGGIGFTHTCTFTQPIWRDIAENGC 181
Query: 262 SNAIGLDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFI 318
N G + + + + G L P + + +G + +G +G F+
Sbjct: 182 LNFNGDMYPGMDHAKRAIGGQISLMGTLSPFSTLMHGSTTDVANGTKKLAAEVGYNGGFV 241
Query: 319 FNLGHGITPQVDPKNVLDLVKT 340
G I + +N+ ++ T
Sbjct: 242 CMPGCDIDWTIPDENLKAMIDT 263
>gi|198400351|gb|ACH87184.1| uroporphyrinogen decarboxylase [Camellia sinensis]
Length = 58
Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 289 LDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRS 343
+DP L + + + +N + G G I NLGHGI +NV + +
Sbjct: 1 VDPGVLFGSKEFITNRINDTVRKTGKGKHILNLGHGIIVGTPEENVAHFFEVAKG 55
>gi|332981914|ref|YP_004463355.1| Uroporphyrinogen decarboxylase [Mahella australiensis 50-1 BON]
gi|332699592|gb|AEE96533.1| Uroporphyrinogen decarboxylase (URO-D) [Mahella australiensis 50-1
BON]
Length = 345
Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 16/180 (8%)
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRII 230
A + LLD L++ + I + GVD I + D + + Y + RII
Sbjct: 163 EAVDVLLDKLAEFTTAVAIECVKKGVDWIWLGDDLGSQKSMLMSPATWRKYFKPRMKRII 222
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLT--DSNAI-----GLDWSVPLSFALELQKEG 283
A+R + + G M L N + + V E
Sbjct: 223 DAIRAVKKDIFIAYHS--CGSMYPVIGDLVEIGINVLNPIQESAEGMVQEDVKKEFGDRL 280
Query: 284 PVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKT 340
+ +D + + +++ D I++ LG +G FIF H I +N+ L +
Sbjct: 281 ALMCGVDTQQFLVDATPEMVRDKTCEIIEKLGYNGGFIFAASHHIQQDTPEENIRALFQA 340
>gi|295110918|emb|CBL27668.1| Uroporphyrinogen-III decarboxylase [Synergistetes bacterium SGP1]
Length = 329
Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 58/364 (15%), Positives = 108/364 (29%), Gaps = 67/364 (18%)
Query: 1 MNERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M KQ+I L + P +W+ ++ + P EL
Sbjct: 1 MLTHKQRIENALALKENDRTPYSMWM-------------------HYPNRDRHPRRLAEL 41
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN-------EGPRMDPITTQEIYLLNP 111
L+ R Y+ D L +G ++ E P + + + + P
Sbjct: 42 ALKAQREYDLDFIKYMPFGLYTTIDMGVDLDVYEGFEKAPTQHEPVIRDVRDWD--RIRP 99
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
ID + +S IL + + H+ + +P T + M S
Sbjct: 100 -IDGTRGEYAVVLESQRILMEMMEEHVPFLQTLFSPATTLAKMCS------PAVLVRHMR 152
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG------EHEFENYAARS 225
++ + +L+ ++D + + A G D A L + E E + +
Sbjct: 153 EDPARVHRVLEMVTDTTIRFARASADLGADGFFY----ASQLSGRQTMEKAEHEAFVEKY 208
Query: 226 VGRIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV----PLSFALELQ 280
I++AV+ R + N + A+ + GL W P +
Sbjct: 209 DLAILNAVKDRTWFNVLHLHGAQV------RIDEVQHYPVQGLSWHDRDEGPSMEEVRKY 262
Query: 281 KEGPVQGNLD--PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
G L L + ++ V + G I G I P +
Sbjct: 263 STKAFVGGLSWGENWLTKTEEQVVGEVREM---CGRPGLILGPGCVIEPHTP----KKFL 315
Query: 339 KTVR 342
+ V
Sbjct: 316 ELVH 319
>gi|156740641|ref|YP_001430770.1| uroporphyrinogen decarboxylase [Roseiflexus castenholzii DSM 13941]
gi|156231969|gb|ABU56752.1| Uroporphyrinogen decarboxylase (URO-D) [Roseiflexus castenholzii
DSM 13941]
Length = 333
Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 54/359 (15%), Positives = 107/359 (29%), Gaps = 46/359 (12%)
Query: 1 MN-ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M+ R++++ ++G ++ PP+ W R+ P + + L +
Sbjct: 1 MSMTRRERLAAAIRGEPVDRPPVALW------RHFP----VDDQDPEQLALS----VAAF 46
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP---RMDPITTQEIYLLNPNID 114
+ F + F V R +EG P++ + +D
Sbjct: 47 QSQYDWDFVKFTPSSSFC---VENWGCRVVYR-GHSEGTSDYVARPVSVPADWRRITPLD 102
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L ++ R + + L+ +P + A +I GG S
Sbjct: 103 PRAGALGAHLVAVRRARALIDPDVPLLATVFSPISQAKNLIGGGMD-----IVHLRRHRS 157
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH----AGCLGEHEFENYAARSVGRII 230
+ L + +++ + ++ A + G D IF A + E E+ RI+
Sbjct: 158 DLLDAL-EAITETTIRFVEAVLETGADG--IFYAMQRCTADVISEAEYREVCRPLDMRIL 214
Query: 231 SAVRRKYPNA---KFISFAKGAGYMLKNYRRLTDSNAIG---LDWSVPLSFALELQKEGP 284
A FI + + + A+ D L+
Sbjct: 215 EAAHAASAAHGKPPFILLHLHGMHSYFDIAAEYPAQALNWHDRDTGPDLAEGARRFPGMV 274
Query: 285 VQGNLDPMRLV-VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP-KNVLDLVKTV 341
V G L +V + + +G + G + P P N+ L V
Sbjct: 275 V-GGLSQRDIVEGSPTAVQSLARQAIAAMGGRRMCLSTGC-VMPTTAPWGNIRALRDVV 331
>gi|294495334|ref|YP_003541827.1| uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
gi|292666333|gb|ADE36182.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
Length = 358
Score = 66.4 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/371 (11%), Positives = 111/371 (29%), Gaps = 48/371 (12%)
Query: 1 MNERKQKILEVLQ---GNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
M R + G + P+ ++ A + + D +
Sbjct: 1 MTSRMTPPERMAAVMSGQKPDRIPVVPFILGYA---------SKITGISLGDFYADGDKC 51
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG---PRM--DPITTQEIYL-- 108
+ +R + ++ ++ + G + F +G P + P+ T +
Sbjct: 52 FDAQFASMRLHGYEQTPMYGYASLGPWEFGGKIGFPYGKGQGAPYVIEHPVNTIDDIENI 111
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
P+ L ++ + + + G+ +T AS + +
Sbjct: 112 KVPDFKEELPGGYKQADIVASRCAEHG--MPITVQIGSTFTAASVVAET------SEFFS 163
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG------CLGEHEFENY 221
+ + + LL+ +SD+ L G + FD G + F +
Sbjct: 164 WILTDPDKVHQLLEKVSDMFINALDYFADKYGPQSLLPFD--GGPSESNTMISPQMFGEF 221
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL------TDSNAIGLDWSVPLSF 275
A + +I + V+ +A + + Y ++ P+
Sbjct: 222 AYPYMQKIHNHVKELGIHAVLMHPCANQNGNVPYYTKMREENDWAGKYVWLFGPETPIKN 281
Query: 276 ALELQKEGPVQ-GNLDPMRLVVGN-QVMIDGVNAILDVL--GSGPFIFNLGHGITPQVDP 331
++ + V GN++P + + +++ ++ G +I G P
Sbjct: 282 QIDAFGDYDVICGNINPPLFLNSTYEEVVELCRENIEEGIDSPGGYILAPGCEFPLDASP 341
Query: 332 KNVLDLVKTVR 342
V+ ++ +
Sbjct: 342 IKVMAMMDAAQ 352
>gi|257064648|ref|YP_003144320.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
gi|256792301|gb|ACV22971.1| uroporphyrinogen-III decarboxylase [Slackia heliotrinireducens DSM
20476]
Length = 363
Score = 66.4 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 40/363 (11%), Positives = 109/363 (30%), Gaps = 43/363 (11%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTP-------- 52
M + +++ +G ++ P + L + P
Sbjct: 9 MTPK-ERLAAYARGEEVDRIPT--------------TLSAGETGCLHLLGIPICDYYFSA 53
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDP-ITTQEIYLLN 110
+ V + D + + + +ALG + + E + +P + + +
Sbjct: 54 DIMVRIESFLADSTGADNLGMGLGLRTVPEALGCKLAYPETSVSYVEEPALKSLDEVEGR 113
Query: 111 PNIDLFLNYLLPIF-QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P++D+ + LPI ++ L+ K + T+ P+T A+ + +
Sbjct: 114 PHVDVRKDGRLPIIIEAFQRLQDKYGDVRTMGSGLAGPFTTAATLYGVER---FLKA--- 167
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--CLGEHEFENYAARSVG 227
++ + L+ + +D E + + A + + +F + +
Sbjct: 168 TRKDPEGVHRLMQYATDCVVECCRDLHEILGIGFSLSEPVASKDLVSKRQFNEFFVPYLR 227
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFALELQKEGPV 285
+ + + ++ N + + + L A +
Sbjct: 228 QCVERM-SEFQNVPSLHICGHTNDRWSEVVECGISGFWVDNCESLCDLKNAH--GSSIGI 284
Query: 286 QGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNL--GHGITPQVDPKNVLDLVKTV 341
GN+ P+ ++ + + V ++ P F L G N++ +
Sbjct: 285 SGNVAPVDVLRNGTQEAIAASVRDCIEQAADNPRGFTLCPGCTTPVGTSLDNMIAFMNAA 344
Query: 342 RSE 344
+
Sbjct: 345 ATY 347
>gi|294494710|ref|YP_003541203.1| uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
gi|292665709|gb|ADE35558.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalophilus mahii DSM
5219]
Length = 346
Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 107/307 (34%), Gaps = 19/307 (6%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALG-RNVRFVENEGPRMDPITTQE 105
+ E + L+ Y D F + A G V + + PI
Sbjct: 43 EYFSNGENVAQAQLKMQETYGHDCFYPFFYASLETQAWGGSTVFYDDGPPNAGKPIIESF 102
Query: 106 IYLLNPNIDLFLNY--LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
+ + + + + ++I+IL + I +I +P+++ ++ GF +
Sbjct: 103 EQIDELEVPDVMGHKGFDEVRKAINILYSQKGEEIPIIAVVMSPFSLP--VMQMGFDRYF 160
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENY 221
Y++ + F L+D E+ +Q+ AG I FD + + F
Sbjct: 161 D----LMYEDRKKFWTLMDLNKQFCTEWANSQLEAGATAICYFDPVSSPTIVPRETFLET 216
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-Q 280
+ I + A G + + T + A+G+ L+ + +
Sbjct: 217 GYKVAKDTIGDINGAVA----THLASGRSIPIIEDLQDTGAAALGVSAMEDLTELKDRCR 272
Query: 281 KEGPVQGNLDPMRLVVGNQ-VMIDGVNAILDVLG-SGPFIFNLGHG-ITPQVDPKNVLDL 337
+ + GNL+ + + + V ++ G G +I + HG + V + +L++
Sbjct: 273 GKISLLGNLNAIEMRHWTAGQAENKVRQAIEKAGPGGGYILSDNHGEMVWDVSHETLLNI 332
Query: 338 VKTVRSE 344
V+
Sbjct: 333 ANAVKKY 339
>gi|256545532|ref|ZP_05472892.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398743|gb|EEU12360.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 372
Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 89/253 (35%), Gaps = 20/253 (7%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
++ LL +L + L++ P+H + F P TV S + +
Sbjct: 114 DEIDMNLLEMPDPYKNKFLKRKIDNARRLKESFPDHK-ISTFVAGPMTVLSAL------R 166
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI-AQIHAGVDVIQIFD--THAGCLGEHEF 218
+ +N + LLDF+ + + +++ G + I D + L +
Sbjct: 167 PIEKLLRDLRKNPQGVKKLLDFVLEANMKWIEVFNKEFGDVGVMIADPVSCDDILSPKQV 226
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA--IGLDWSVPLSFA 276
+ ++ + + + Y + G+ + + LT+ +D LS
Sbjct: 227 KEFSFPYLKELTDRI---YKVNNIKANLHICGHTKRQWENLTNLQIGSFSVDNCHDLSEC 283
Query: 277 LE-LQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSG--PFIFNLGHGITPQVDP 331
E +Q + + GN+ P+ ++ + +I+ V + + FI G
Sbjct: 284 KEIIQDKLSLMGNVPPVDVMRNGSVEDVINSVKSCIKKGADNKMGFICATGCATPANSPK 343
Query: 332 KNVLDLVKTVRSE 344
+N+ V V+
Sbjct: 344 ENLDAFVYAVQKY 356
>gi|298674740|ref|YP_003726490.1| uroporphyrinogen decarboxylase [Methanohalobium evestigatum Z-7303]
gi|298287728|gb|ADI73694.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalobium evestigatum
Z-7303]
Length = 358
Score = 65.6 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 55/374 (14%), Positives = 113/374 (30%), Gaps = 58/374 (15%)
Query: 1 MNERKQKILEVLQ---GNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFL---DMCYTP 52
M+ R + G + P+ ++ A +F D C+
Sbjct: 1 MSTRMTPPERMAAVMSGQKPDRVPVVPFILGYAA------NITGISLGDFYADGDKCFDA 54
Query: 53 EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG---PRMD--PITTQEIY 107
++ +R + ++ ++ A LG + F +G P ++ P+ T E
Sbjct: 55 QFAS------MRLHGYEQTPMYGYASCGAWELGGKIGFPYRKGQGAPYVEEHPVNTVEDV 108
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
D ++ + K + + G+ +T AS + +
Sbjct: 109 ENLKVPDFRNELPGAYKEADKVASKCAERGMPVTVQIGSVFTAASVVAET------SKFF 162
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG------CLGEHEFEN 220
+ + +LD +SD+ + G + FD G + FE
Sbjct: 163 NWIVTKPDVVHQILDKVSDMFINAIDYFADKYGPKTLLPFD--GGPSESNTMISSKMFEE 220
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQ 280
+A V +I V + A + + Y ++ + N DWS + +
Sbjct: 221 FAYPYVKKIHDHVNERGIPAVLMHPCADQNANIPYYVKMREEN----DWSSKYVWLFGPE 276
Query: 281 KEGPVQ-----------GNLDPMRLVVG--NQVMIDGVNAILDVL-GSGPFIFNLGHGIT 326
Q GN++P + + I + + +I + G
Sbjct: 277 TSIKTQIDAFGDHDIICGNINPPLFQSSTYEETLEICRENIEEGMNAPNGYILSAGCEFP 336
Query: 327 PQVDPKNVLDLVKT 340
P P V+ +V
Sbjct: 337 PNAAPIKVMAMVDA 350
>gi|294101463|ref|YP_003553321.1| uroporphyrinogen decarboxylase [Aminobacterium colombiense DSM
12261]
gi|293616443|gb|ADE56597.1| uroporphyrinogen decarboxylase [Aminobacterium colombiense DSM
12261]
Length = 333
Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 91/298 (30%), Gaps = 41/298 (13%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV----------ENEGPRMD 99
P+ ++ T+Q R+++D + L G +++ G D
Sbjct: 32 EDPKMLIKKTIQFQERFHWDFVKVTYQGLFSIQDWGSKIKWPTRDCEWPNTCAGVGVVTD 91
Query: 100 P-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
I E + + + + + ++ T A M
Sbjct: 92 YSIKNVEDWKKLHVLPMDEGSMKDTIDVAKGVIDHYKGEAPVVVTVFNSLTTAQKM---S 148
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL----- 213
K + QN AF ++ ++ + Y+ ++AG D IF A L
Sbjct: 149 GDKMF----IHMRQNPEAFREGIETITQTTINYVKELVNAGADG--IF--FASQLGNYDK 200
Query: 214 -GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-- 270
E+E + I+ ++ + N I G M + + L+W
Sbjct: 201 MSVAEYETFGRPYDLSILEHAKKMWFN---IMHMHGNAPMFEMMSQYP---VQALNWHDR 254
Query: 271 ---VPLSFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGH 323
+ L EL + + G +D ++ + + + L + G I G
Sbjct: 255 LVDIDLRKGRELCGDKILIGGVDEFTVLPNGSDDELKAQLLDALQQVSDGRIILGPGC 312
>gi|325662270|ref|ZP_08150885.1| hypothetical protein HMPREF0490_01623 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471522|gb|EGC74743.1| hypothetical protein HMPREF0490_01623 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 364
Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 93/247 (37%), Gaps = 19/247 (7%)
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG-FIKDHG 164
+ ++NP D + +L + + L+K+ ++ L P T A + G F++D
Sbjct: 115 MQVINPYTDGKMPIMLKMME---QLQKQFGDYDILKSGVCGPMTCALSLREAGMFLRDLK 171
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD--THAGCLGEHEFENYA 222
+ + LL F + ++ V I D + +G+ FEN++
Sbjct: 172 K-------QPEEMHHLLQFSLECIKAWMKVVYDEFGCVCSIADPASSMNLIGKKHFENFS 224
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-SFALELQK 281
+ ++ + + I + + + + + +A +D L L L
Sbjct: 225 KPYLKELVVWAKSYMGKSPSIHICGKSRKVWDDLKEI-GFSAFSVDNCEDLFELKLHLGG 283
Query: 282 EGPVQGNLDPMRLVVGNQV--MIDGVNAILDVLGSGP--FIFNLGHGITPQVDPKNVLDL 337
E + GN+ P+ ++ + +I V ++ + P ++ + G I +N+L
Sbjct: 284 EMAISGNVPPVDVLKNGDIFSVIQSVKECIEKAANSPKGYLLSAGCQIPLGTPKENLLAY 343
Query: 338 VKTVRSE 344
+ R
Sbjct: 344 IYAARKY 350
>gi|293364297|ref|ZP_06611023.1| uroporphyrinogen-III decarboxylase [Streptococcus oralis ATCC
35037]
gi|307702737|ref|ZP_07639689.1| hypothetical protein SMSK23_0576 [Streptococcus oralis ATCC 35037]
gi|291317143|gb|EFE57570.1| uroporphyrinogen-III decarboxylase [Streptococcus oralis ATCC
35037]
gi|307623853|gb|EFO02838.1| hypothetical protein SMSK23_0576 [Streptococcus oralis ATCC 35037]
Length = 332
Score = 65.6 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/337 (13%), Positives = 105/337 (31%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+++ +L+ +G ++ P+ + + F P +E +
Sbjct: 1 MSEKREWVLKAFKGEKVDRVPVGF-------WHHFTSEDEWLHGF----SNP-VIIEKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P + ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQP-LGPDHAWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ +A +
Sbjct: 101 KEQVDLVKKIKQEFTEDIVAIYNVFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPKALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIEEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|306825912|ref|ZP_07459251.1| clan AA aspartic protease [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432273|gb|EFM35250.1| clan AA aspartic protease [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 332
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 104/337 (30%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+K+ +L+ +G ++ P+ + + F P +E +
Sbjct: 1 MSEKKEWVLKAFRGEKVDHVPVGF-------WHHFTSEDEWLHGF----SNP-VIIEKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P + ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQP-LGPDHAWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ A +
Sbjct: 101 KEQVDLVKKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPEALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIKKAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 IAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|159906203|ref|YP_001549865.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C6]
gi|159887696|gb|ABX02633.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C6]
Length = 287
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 17/191 (8%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDP--ITTQEIYLLNPNIDLFLNYLLPIFQSI 127
+ + V A++LG + + + GPR T + + IDL + + +I
Sbjct: 53 CRVPFCMTVEAESLGAKINMGDEKYGPRAKEYAFKTLDELEIIKPIDLTNGRIKIVLDAI 112
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L++ I ++ P T+ S ++ + + + N N L+FL D
Sbjct: 113 HELKES--GEIPILA-VEGPITIISSLMESRIF--YKELKK----NPERMNTFLNFLEDE 163
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+Y+++ I G +I D AG + G F Y+ + II V+ + N I
Sbjct: 164 IVKYILSGIENGAKIISFGDP-AGSIDIVGPKVFREYSGKIAKNIIEKVKSQEKNC-IIH 221
Query: 245 FAKGAGYMLKN 255
L+N
Sbjct: 222 VCGKTSVSLEN 232
>gi|298243999|ref|ZP_06967806.1| Uroporphyrinogen decarboxylase (URO-D) [Ktedonobacter racemifer DSM
44963]
gi|297557053|gb|EFH90917.1| Uroporphyrinogen decarboxylase (URO-D) [Ktedonobacter racemifer DSM
44963]
Length = 328
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/355 (16%), Positives = 121/355 (34%), Gaps = 50/355 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN + +++ VL+G ++ P+ W +Y+ R+ L E
Sbjct: 1 MN-KMERVEAVLRGEAVDRVPVSAW--------WHDYQ--REGSAQML---------AEA 40
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE--GPRMD--PITTQEIYLLNPNID 114
TL+ RY++D + I + + + P ++ PI + +I+
Sbjct: 41 TLESYSRYDWDYVKVTPRSSYIVEGWKARYKPSTEKYMPPVLEATPIRGSSDWKRLRHIE 100
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L ++ ++ L + +P VA ++ G Q + ++
Sbjct: 101 PDQGALAEQLLALQLINHALGFEAYFLETVFSPLAVAQILVGGS-----EQVLLTMREDR 155
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDT--HAG--CLGEHEFENYAARSVGRII 230
A + L +S+ + IA + G I ++T A L ++ + + I+
Sbjct: 156 NAMHAALRVISETITSFAIACLEQGAHGI-YYETNGWASTEQLTADKYREFGEQYDQEIL 214
Query: 231 SAVRRKYPNAKF------ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP 284
A++ + I F A Y + ++++ + L +
Sbjct: 215 DALKSRSKCTALHNSGANIHFDLLASYPIHAINWASEASG-----NPDLRDGQRRSGKI- 268
Query: 285 VQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
V G L + D V + L+ G + G +TP V K++ L
Sbjct: 269 VMGGLSQGAFQKGASPSQVQDEVGSALEATGGKHLLLAPGGSLTPDVPTKSLNAL 323
>gi|221636285|ref|YP_002524161.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
gi|221157792|gb|ACM06910.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
Length = 315
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/357 (16%), Positives = 108/357 (30%), Gaps = 70/357 (19%)
Query: 3 ERKQKILEVLQGNVINPPPIWL---MRQAGRYLPE---YRQIRKKFKNFLDMCYTPEYTV 56
+++++ LQG +++ PP+ R PE YR + + +F
Sbjct: 5 SKRERVEAALQGELVDRPPVCFWHHFR------PEGSGYR-LAELTYDFF---------- 47
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNID-L 115
IRR++ D A L D+ ITT + + L ID
Sbjct: 48 ------IRRFDLDIAKLMPDLRYPFPR---------------RTITTPDDWYLVDAIDFR 86
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
Y +++ LR+ + ++ +P T Y ++ DH A +
Sbjct: 87 TSRYAREWVRAVRRLRELAGPEVPIVVTVFSPLTQVLYFVA-----DHQLFLQHAVERPA 141
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD---THAGCLGEHEFENYAARSVGRIISA 232
+ +L +++ + + + AG D I F A + + + +S
Sbjct: 142 LLHQVLAIIAENVRQQIELVLAAGADGI-FFALQGCSATVMPVERYREFGRPYDLLALSG 200
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV----PLSFALELQKEGPVQGN 288
+ N I G + + + D L WS P + + G
Sbjct: 201 AADAWLN---ILHVHGERDLY--FDEVLDYPVRVLSWSDRRAGPSLAQASQRTTRCLMGG 255
Query: 289 LDPM--RLVVGNQVMIDGVNAILDVLGSGPFI-FNLGHGITPQVDP---KNVLDLVK 339
D + + D L I N G + D +V
Sbjct: 256 WDEFGPLARGPEEGIRDEALDALRQTNGRRLILAN-GCSVPDDTDERWLAAARRIVD 311
>gi|302391421|ref|YP_003827241.1| uroporphyrinogen-III decarboxylase [Acetohalobium arabaticum DSM
5501]
gi|302203498|gb|ADL12176.1| Uroporphyrinogen-III decarboxylase [Acetohalobium arabaticum DSM
5501]
Length = 351
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/363 (15%), Positives = 121/363 (33%), Gaps = 43/363 (11%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPE---YRQIRKKFKNFLDMCYTPEYTVELT 59
+++ + +G+ I+ PI +P Y K + + E + E+
Sbjct: 5 TTNERLRRLFKGDKIDRIPI---------IPSASLYAGNLAKVTS-REYFLNYEKSFEIK 54
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVEN---EGPRMDPITTQEIYLLNPNIDLF 116
+ +D F+ I+ G + P++ + L+
Sbjct: 55 KIAAEIFGYDENPEFNLPGYISWDFGGELHISNKFNIVEPQIIEYPVSDKNDLDNLFLPD 114
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
L+ ++ R N +++ F G+P V ++ D + Y+
Sbjct: 115 LDEAPGFQNRLNFHRIARKNDLSVSIFAGSPLEVVGNIV------DINTLIKWFYKKPEI 168
Query: 177 FNWLLDFLSDVSAEYLIAQIHA-GVDVIQIF-----DTHAGCLGEHEFENYAARSVGRII 230
+ LL + E I GV+ F +++ + E F+ + + I
Sbjct: 169 VHSLLKLGVEYILESADYYIDEFGVENCIAFSAYPLESNT-IMSEKMFKKFCLPYIMEIF 227
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN--AIGLDWSVPLS-FALELQKEGPVQG 287
+ +K + I LK ++ L + I + + + A + + G
Sbjct: 228 EKLIQKQIKSFGIHLCGDHRLNLKYFKNLPLPDRSFISVSEKMDIELVAQMFGDKHIIGG 287
Query: 288 NLDPMRLVVGNQ-VMIDGVNAILDVLGS--GPFI----FNLGHGITPQVDPKNVLDLVKT 340
N+ L+ G + + AI++ + + G F NL P P N+ ++K
Sbjct: 288 NIPTSLLINGTANEVYNKSTAIINKMKNYAGGFALMPSCNL----PPVTPPLNLYAMIKA 343
Query: 341 VRS 343
V+
Sbjct: 344 VKE 346
>gi|300855673|ref|YP_003780657.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435788|gb|ADK15555.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 371
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 13/176 (7%)
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC------LGEHEFENYAARSVG 227
+D + + + + L QI V + +F G L FE ++ +
Sbjct: 196 PDKVQAAMDVIEEENEKVLRKQIRE-VKPLAVF--TGGAREAGDFLSLKAFERFSWQYTK 252
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-GLDWSVPLSFALEL-QKEGPV 285
RII + + A + + L I D + + A E+ +
Sbjct: 253 RIIDIIAEEGSIAYL-HLDMSWDRFINYFLDLPKGKCIFSPDSTTNIFKAGEVLRGHMCF 311
Query: 286 QGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
G++ P L + + ++ I + G I P +NV +V
Sbjct: 312 MGDVAPSLLTLGTPDEVYKYARRLIKEFAPQGLIMSSGCSIPPNAKVENVKAMVAA 367
>gi|83590161|ref|YP_430170.1| hypothetical protein Moth_1314 [Moorella thermoacetica ATCC 39073]
gi|83573075|gb|ABC19627.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 438
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/327 (16%), Positives = 114/327 (34%), Gaps = 40/327 (12%)
Query: 31 YLP--EYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNV 88
Y+ EY + + +F Y P L+P+ + L + V
Sbjct: 135 YMKADEYNALIQDPSDFWVRIYLPRI--FGALKPLEK------------LAPLTDV---V 177
Query: 89 RFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW 148
V G P E+ + N + + + + L F G
Sbjct: 178 EIVMTCG-SFLPFGLPEVQEALRALIAAGNEVRRWAGMLRAVDQALQGQ-GFPAFLGGVS 235
Query: 149 TVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQI-- 205
+I +G Y+ L+ ++ ++ +A A G ++ +
Sbjct: 236 KAPFDIIGDTLRGTYGIMLDM-YRQPEKLQEALEAVTPLAIRMGVASAKAAGHPLVFMPL 294
Query: 206 ---FDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA-GYMLKNYRRLTD 261
D G L + ++ + ++ ++I+ + + F FA+G+ L+ R L
Sbjct: 295 HKGAD---GFLSDKQYRTFYWPTLKKVITGLIEE-GLVPF-LFAEGSYNSRLEVIRDLPK 349
Query: 262 SNAIGLDWSVPLSFALELQKEGP-VQGNLDPMRLV--VGNQVMIDGVNAILDVLGS-GPF 317
+ L ++ A E+ + + GN+ P+ L+ + + + ++ G G F
Sbjct: 350 GKTVWLFDDTDMARAKEILGDIACIAGNV-PITLLSLGTPEEIKEYCKQLIKTAGKDGGF 408
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRSE 344
I + G I + P+N+ L+++ R
Sbjct: 409 ILSSGATID-NIKPENLRALIESAREF 434
>gi|332359995|gb|EGJ37809.1| hypothetical protein HMPREF9393_1590 [Streptococcus sanguinis
SK1056]
Length = 348
Score = 64.9 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/343 (16%), Positives = 106/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ + + ++ P + AP + + + F ++
Sbjct: 110 YHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG++ I QI D G + + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTRRIIEEAGIEGIYLSTQQIQD---GRVDAASYRRYIEPSTIKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GAG L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGAGNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTGSRAELEAETKRLLAAAGSQGVI--LG 324
>gi|134045874|ref|YP_001097360.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C5]
gi|132663499|gb|ABO35145.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C5]
Length = 287
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 17/191 (8%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDPITTQEIYLLN--PNIDLFLNYLLPIFQSI 127
+ + V A++LG + + + GPR + + L IDL + + +I
Sbjct: 53 CRVPFCMTVEAESLGAKINMGDEKYGPRAKEYAFKNLDELETIKPIDLTSGRIRMVLDAI 112
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L+K + ++ P T+ S ++ +N N L+FL D
Sbjct: 113 QELKKS--GELPILT-VEGPITIISSLMES------RIFYKELRKNPERMNTFLNFLEDE 163
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+Y+++ I G +I D AG + G F Y+ + II V+ K N I
Sbjct: 164 IVKYVLSGIENGAKIISFGDP-AGSIDIVGPKVFREYSGKIAKNIIEKVKSKEKNC-IIH 221
Query: 245 FAKGAGYMLKN 255
L+N
Sbjct: 222 VCGKTSVSLEN 232
>gi|45358397|ref|NP_987954.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis S2]
gi|44921155|emb|CAF30390.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
S2]
Length = 287
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 17/191 (8%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDPITTQEIYLLN--PNIDLFLNYLLPIFQSI 127
+ + V A++LG + + + GPR + + L IDL + + +I
Sbjct: 53 CRVPFCMTVEAESLGAKINMGDEKYGPRAKEYAFKNLDELESIKPIDLTSGRIKTVLGAI 112
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L++ I ++ P+T+ S +I D +N N L+FL D
Sbjct: 113 RELKES--GEIPILA-VEGPFTILSSLI------DSTAFYKELRKNPDQANEFLNFLEDE 163
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+Y+++ I G +I D AG + G F Y+ + II VR K N I
Sbjct: 164 IVKYILSGIENGAKIISFGDP-AGSIDIVGPKVFREYSGKIAKNIIEKVRLKEKNC-IIH 221
Query: 245 FAKGAGYMLKN 255
L+N
Sbjct: 222 LCGLTSVALEN 232
>gi|324992507|gb|EGC24428.1| hypothetical protein HMPREF9390_1493 [Streptococcus sanguinis
SK405]
gi|325697409|gb|EGD39295.1| hypothetical protein HMPREF9384_0780 [Streptococcus sanguinis
SK160]
gi|327460731|gb|EGF07066.1| hypothetical protein HMPREF9378_1487 [Streptococcus sanguinis SK1]
Length = 348
Score = 64.5 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/343 (16%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-NNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D + + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHVESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP T + + F +N
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVTYLKRWFRREGSRGDREIADFLAENPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG + I QI D G + + +Y S ++
Sbjct: 170 LTGQVLDVIAGDIAILTRRIIEEAGTEGIYLSTQQIQD---GRVDAASYRSYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGVNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + D +L GS I LG
Sbjct: 284 TVLGGFENSRAALLNTGSRAELEDETKRLLAAAGSQGVI--LG 324
>gi|327472452|gb|EGF17883.1| hypothetical protein HMPREF9391_2003 [Streptococcus sanguinis
SK408]
Length = 348
Score = 64.1 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/343 (16%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-NNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D + + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHVESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP T + + F +N
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVTYLKRWFRREGSRGDREIADFLAENPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG + I QI D G + + +Y S ++
Sbjct: 170 LTGQVLDVIAGDIAILTRRIIEEAGTEGIYLSTQQIQD---GRVDAASYRSYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGVNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRL----VVGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + D +L GS I LG
Sbjct: 284 TVLGGFENSRASLLNTGSRAELEDETKRLLAAAGSQGVI--LG 324
>gi|118579854|ref|YP_901104.1| uroporphyrinogen decarboxylase [Pelobacter propionicus DSM 2379]
gi|118502564|gb|ABK99046.1| Uroporphyrinogen decarboxylase (URO-D) [Pelobacter propionicus DSM
2379]
Length = 345
Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 59/354 (16%), Positives = 125/354 (35%), Gaps = 43/354 (12%)
Query: 6 QKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
Q+ ++ G + + P+ L+ Q R L + + E E L
Sbjct: 5 QRFQAIMAGQLPDRVPVLCNLLDQGAREL---------GMSIKEYYRRGENVAEGQLHMR 55
Query: 64 RRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIYLLNPNIDLFLNYLL 121
++Y +D+ + + + A+ LG +GP I ++ + I + L
Sbjct: 56 KKYGYDSLLGLFYVAMEAEMLGCRSIIYAEDGPPNVGQLIISEPEDIRRLQIPDDMEELP 115
Query: 122 PIFQS---ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ I IL+++ +IG A +T+ + ++ + F + +
Sbjct: 116 RFRELSACIRILKREAAGRFPVIGVVTASFTLPAMLMGISGWLNL-----FLSGPTELRS 170
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRIISAVRRK 236
LL+ S ++A AG D+I ++ + +F + SV R + +
Sbjct: 171 LLLEKCSQFCRRQILALRQAGADLIVYTNSVGTATFVTSRQFHDLVLPSVLRDLEGI--- 227
Query: 237 YPNAKFISFAKGAGYM---LKNYRRLTDSNAIGLDWSVPLSFALELQKEGP-VQG--NLD 290
+ + G G + LK T A ++ + A + + G N D
Sbjct: 228 --GTGDLVYFNGGGQINPQLKTLVEQTPLRAFYINPFDDIGEAAGMLNGQALLVGTIN-D 284
Query: 291 PMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHG--ITPQV-DPKNVLDLVKT 340
+ + + D V I++ F F G + P V +N+ ++++
Sbjct: 285 IRLINGSKEEIDDQVKGIMEQGKRVTGFAF----GTLMMPYVIPEENIRAMLES 334
>gi|332365849|gb|EGJ43606.1| hypothetical protein HMPREF9389_0286 [Streptococcus sanguinis
SK355]
Length = 348
Score = 63.7 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/343 (14%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + + I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSTLYS-----------NHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + +++ P + AP + + + F ++
Sbjct: 110 HHPWIEQQIEMVKAVKESYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG++ I Q+ D G + + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTRRIIEEAGIEGIYLSTQQVQD---GRVDAASYRRYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ + L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGLSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTGSRAELEAETKRLLAAAGSQGVI--LG 324
>gi|325264471|ref|ZP_08131201.1| hypothetical protein HMPREF0240_03477 [Clostridium sp. D5]
gi|324030133|gb|EGB91418.1| hypothetical protein HMPREF0240_03477 [Clostridium sp. D5]
Length = 379
Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 61/385 (15%), Positives = 121/385 (31%), Gaps = 52/385 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAG---RYLPEYRQIRKKFKNFLDMCYTPEYT 55
MN R +++ VL+ + + P+ W G R E+ +I K+ + ++
Sbjct: 1 MNSR-ERVRAVLRREIPDRVPMDLW-----GTDSRMNTEFYEIAAKYLGYTELGERIRPG 54
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGR------NVRFVENEG---PRMDPITTQEI 106
+ R + + + D N+ G + P +
Sbjct: 55 STSEYEDYRISDLIGSDFRHINIGKPDGFKSYKDDDGNIIDEWGVGRKLIGIHPSLSYH- 113
Query: 107 YLLNPNIDLFLNYLLPIFQ---SISILRKKLPN--HITLIGFCGAPWTVASYMISGGFIK 161
L + I+ Y P+ + + LR++ + T T + +++
Sbjct: 114 PLADAEIEDLETYHWPVMRDEGRVRGLRERAADWYENTDFAITATSATSGTIFEMCQYLR 173
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI--FDT-----HAGCLG 214
Q V Y++ L++ ++D+ E + + A I+ F + +A +
Sbjct: 174 GIEQFLVDMYEDPDFAMALINKVTDLLIELNVWYLEAVGPYIEWLEFSSDFGTQNAPFMS 233
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG-----LDW 269
FE + R+ A R+ PN K + G+ +L + +
Sbjct: 234 PDLFEEFMLEPHRRLFDACRKAAPNIKIFLHSCGSVKLLMPHFIEMGVDIQSALQPLAKD 293
Query: 270 SVPLSFALELQKEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITP 327
E G +D L + V LD G +I +P
Sbjct: 294 MDSAELKKEFGDRLIFHGGVDIQQALPGTKEDTEKDVKKRLDAFAKDGGYIL------SP 347
Query: 328 ------QVDPKNVLDLVKTVRSEKI 346
V +N L + + RS I
Sbjct: 348 SNHFQTDVPVENFLHMYEVGRSYGI 372
>gi|322374988|ref|ZP_08049502.1| hypothetical protein HMPREF0849_00704 [Streptococcus sp. C300]
gi|321280488|gb|EFX57527.1| hypothetical protein HMPREF0849_00704 [Streptococcus sp. C300]
Length = 332
Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 104/337 (30%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+K+ +L+ +G ++ P+ + + F P +E +
Sbjct: 1 MSEKKEWVLKAFRGEKVDRVPVGF-------WHHFTSEDEWLHGF----SNP-VIIEKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P ++
Sbjct: 49 EGHKRFIREIQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQPLGPEH-AWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ +A +
Sbjct: 101 KEQVALVQKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPKALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIEEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGRTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|332365138|gb|EGJ42901.1| hypothetical protein HMPREF9396_1579 [Streptococcus sanguinis
SK1059]
Length = 348
Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 54/343 (15%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAFVRAARPDFVKIMSDGFFKYPSKLYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP + + + F ++S
Sbjct: 110 HHPWVEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDSE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG++ I Q+ D G + + Y S ++
Sbjct: 170 LTRHVLDVIATDIAILTRRIIEEAGIEGIYLSTQQVQD---GQVDAASYRRYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + D +L G I LG
Sbjct: 284 TVLGGFENGRAALLHTGSRAELEDETKRLLAAAGRQGVI--LG 324
>gi|39997481|ref|NP_953432.1| methylcobamide:CoM methyltransferase-related protein [Geobacter
sulfurreducens PCA]
gi|39984372|gb|AAR35759.1| methylcobamide:CoM methyltransferase-related protein [Geobacter
sulfurreducens PCA]
gi|298506417|gb|ADI85140.1| UroD-like decarboxylase/methyltransferase, putative [Geobacter
sulfurreducens KN400]
Length = 341
Score = 62.9 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/323 (14%), Positives = 87/323 (26%), Gaps = 56/323 (17%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGP--RMDPITTQEIY- 107
+P E + + D + A+A G V + GP + P+
Sbjct: 43 SPRLYAEGQDRVAELFGPDILFAPFALAREAEAFGSTVVYHR-HGPPNVVKPVVKNAADF 101
Query: 108 --LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
L +P+ D LL + +S+ +L + L G AP + + ++
Sbjct: 102 MRLADPDPDAHPA-LLYLRESVRLLADGYKGRVPLAGILTAPVDLPAIIMG--------- 151
Query: 166 NRVFAYQ---NSRAFNWLLDFLSDVSAEYLIAQIHAGVDV----IQIFDTHAGCLGEHEF 218
+ + +L+ + G D + F+T A
Sbjct: 152 IDAWLETLLFEPELASAVLEKTGRHFVAMASRLLGDGADFVAMPVMFFNT-ALVTSRIA- 209
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGY----MLKNYRRLTDSNAIGLDWSVPLS 274
RI+ A+ + G L L +D
Sbjct: 210 -------AERIVPALAAAFAQVPGPLVFHHGGNRIAPFLGELAELPGVAGFVIDPRDSFQ 262
Query: 275 FAL-ELQKEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLGSGPF-IF---------NLG 322
A + + G L+ P+ ++ IL IF N
Sbjct: 263 DARARVGDGRVLLGKLNGPLLGLLTPDDACRVTAEILADRRDDRHFIFASSAADVPWN-- 320
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
P+ + + T+R +
Sbjct: 321 ------TPPETISAVADTIRQWQ 337
>gi|298675196|ref|YP_003726946.1| uroporphyrinogen decarboxylase [Methanohalobium evestigatum Z-7303]
gi|298288184|gb|ADI74150.1| Uroporphyrinogen decarboxylase (URO-D) [Methanohalobium evestigatum
Z-7303]
Length = 358
Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/371 (14%), Positives = 112/371 (30%), Gaps = 52/371 (14%)
Query: 1 MNER---KQKILEVLQGNVINPPPIWLMRQAGRYLP--EYRQIRKKFKNFLDMCYTPEYT 55
M R +++ V+ G + P+ P E + D +
Sbjct: 1 MTTRMTSPERMAAVMSGQKPDRVPVV---------PFIEGYATNITGISLGDFYADGDMC 51
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG---PRMD--PITTQEIYLLN 110
+ +R + ++ ++ A G + F +G P ++ P+ E
Sbjct: 52 FDAQFASMRLHGYEQTPMYGYASCGAWEFGGKIGFPYRKGQGAPYVEEHPVNKVEDVENL 111
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
D ++ + K + + G+ +T AS + + +
Sbjct: 112 KVPDFRDELPGAYKEADKVAAKCAERGMPVTVQIGSVFTAASVIAET------SKFFNWV 165
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAG------CLGEHEFENYAA 223
+ +LD +SD+ + G + FD G + FE +A
Sbjct: 166 VTKPDVVHQILDKVSDMFINAVDYFADKYGPKNLLPFD--GGPSESNTMISAKMFEEFAY 223
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG 283
V +I VR + A + + Y ++ + N DWS + +
Sbjct: 224 PYVKKIHDHVRERGIPAVLMHPCADQNGNIPYYVKMREEN----DWSGKYVWLFGPETSI 279
Query: 284 PVQ-----------GNLDPMRLVVG--NQVMIDGVNAILDVL-GSGPFIFNLGHGITPQV 329
Q GN++P ++V+ I + + +I G P
Sbjct: 280 KTQIDAFGDHDVICGNINPPLFQSSSYDEVLELCRENIEEGMNSPSGYILAAGCEFPPNA 339
Query: 330 DPKNVLDLVKT 340
P V+ +V
Sbjct: 340 APIKVMAMVDA 350
>gi|150402006|ref|YP_001329300.1| uroporphyrinogen decarboxylase [Methanococcus maripaludis C7]
gi|150033036|gb|ABR65149.1| Uroporphyrinogen decarboxylase (URO-D) [Methanococcus maripaludis
C7]
Length = 287
Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 70/191 (36%), Gaps = 17/191 (8%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDPITTQEIYLLN--PNIDLFLNYLLPIFQSI 127
+ + V A++ G + + + GPR + + L IDL + + ++
Sbjct: 53 CRVPFCMTVEAESFGAKINMGDEKYGPRAKEYAFKNLDELETIKPIDLTSGRIKIVLDAV 112
Query: 128 SILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
L++ I ++ P T+ S ++ +N N L+FL D
Sbjct: 113 HALKES--GEIPILA-VEGPITIISSLMES------RIFYKELRKNPERMNNFLNFLEDE 163
Query: 188 SAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
+Y+++ I G +I D AG + G F Y+ + II V+ N I
Sbjct: 164 IVKYILSGIENGAKIISFGDP-AGSIDIVGPKIFREYSGKIAKNIIEKVKSNEKNC-IIH 221
Query: 245 FAKGAGYMLKN 255
L+N
Sbjct: 222 VCGKTSVSLEN 232
>gi|260655271|ref|ZP_05860759.1| putative uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33
E1]
gi|260629719|gb|EEX47913.1| putative uroporphyrinogen decarboxylase [Jonquetella anthropi E3_33
E1]
Length = 336
Score = 62.9 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/363 (13%), Positives = 106/363 (29%), Gaps = 59/363 (16%)
Query: 1 MN-ERKQKILEVLQGNVINPP--PIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M+ KQ++ L + +W+ +F + P E
Sbjct: 1 MSLTHKQRVERALAHQETDRIAYSMWM-------------------HFPNRDRHPRRLAE 41
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN--EGPRMDPITTQEIYLLNPN--I 113
L+L +Y+ D + G ++ E P + +++ + +
Sbjct: 42 LSLANQVKYDLDFIKFMPFGMYSTIDFGVDLDVFPGYTEAPVLHAPIIKDVKDWDKIHFV 101
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+ ++ +L + + I + +P T + M S + +H + Q+
Sbjct: 102 PGTAGEYAVVLEAQQLLFEMMDERIPFLQTVFSPMTTLAKMCSPKVLVEHLR------QD 155
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE------FENYAARSVG 227
+ L+ ++ + E++ A + G D A L + +
Sbjct: 156 PARIHRALEIVTATTLEFMKASVELGADGFF----FASQLSGEDAMTSEEHTAFVKYYDK 211
Query: 228 RIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV----PLSFALELQKE 282
++ A + + N + K + + D GL W P + +
Sbjct: 212 ELLKATASQTWFNVLHLHGPKV------RLKEVQDYPVQGLSWHDRDDGPSMDEVRSYSD 265
Query: 283 GPVQGNLD--PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
G L L ++ + V + I G I PQ +
Sbjct: 266 KTFVGGLSWGSNWLGKTDEEVTAEVREVASRHDGKGIILGPGCVIAPQTPESRLQ----L 321
Query: 341 VRS 343
V S
Sbjct: 322 VHS 324
>gi|332983469|ref|YP_004464910.1| hypothetical protein Mahau_2968 [Mahella australiensis 50-1 BON]
gi|332701147|gb|AEE98088.1| hypothetical protein Mahau_2968 [Mahella australiensis 50-1 BON]
Length = 354
Score = 62.6 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 87/233 (37%), Gaps = 17/233 (7%)
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
IF I IL K N L+ G P S+++ + + +L++
Sbjct: 124 IFDHIQILSDKYKNECVLMLNEGNPI---SWILDPHGCVGFENGLISMIDKADKMEYLIN 180
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDT--HAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
+ + A G D +T A + + N + + +A+ +
Sbjct: 181 KCYEAILPRMEALKEMGGDGYIGSETYCSADIMSPDMYRNLIFEAQKKFYTAL-DRMGLI 239
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGL-----DWSVPL-SFALELQKEGPVQGNLDPMRL 294
+ F +L + ++L + + ++++ + S L+ + + GNLD + +
Sbjct: 240 PVVYFLGDINPLLDDIKQL-GVKGLMVEESKKNFTLDIGSIYDRLEGQVCLFGNLDSVYI 298
Query: 295 V--VGNQVMIDGVNAILDVLGSGPFI-FNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + ++ + V G F+ N G I+ N+L +++TV +E
Sbjct: 299 LQKGSREDVVRETRRQISVCNRGSFVMAN-GCPISFNTPQNNILAMIETVHNE 350
>gi|320160573|ref|YP_004173797.1| hypothetical protein ANT_11630 [Anaerolinea thermophila UNI-1]
gi|319994426|dbj|BAJ63197.1| hypothetical protein ANT_11630 [Anaerolinea thermophila UNI-1]
Length = 334
Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 61/345 (17%), Positives = 112/345 (32%), Gaps = 58/345 (16%)
Query: 3 ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++++ L G + + P+ W R+ P + TPE T
Sbjct: 7 SHRERLETCLSGEIPDRVPVALW------RHFP--------VDD-----QTPEGLAAATA 47
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP----------ITTQEIYLLN 110
R Y+FD + A + E+E R P I E +
Sbjct: 48 AFQRLYDFD-----FIKVTPASSFCLKDWGAEDEW-RGHPEGTREYTRRVIQQPEDWAKL 101
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P +D +L + IL + H ++ +P A +I +
Sbjct: 102 PLLDPTSGHLGDQIHCVRILTAEFAPHTPVVQTIFSPLAQAKNLIG------QENLLIHL 155
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGR 228
+ A + L+ ++ V+ ++ +D I HA G L E EFE + R
Sbjct: 156 RRYPEALHAGLERITQVTIRFIEELRKTAIDGIFYAVQHAQYGLLSEEEFETFGRYYDLR 215
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW----SVPLSFALELQKEGP 284
++ AV+ + N I G M + ++ D L+W + P + G
Sbjct: 216 VLEAVKGWWLN---IIHLHGNEVM---FNKVADYPCTVLNWHDRQTSPSLSEAKQTYSGV 269
Query: 285 VQGNLDPM--RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP 327
+ G L ++ + + + + FI G + P
Sbjct: 270 ICGGLRQWETLVLGTPEAVFEEAREAILSTEGERFILGTGC-VLP 313
>gi|167759449|ref|ZP_02431576.1| hypothetical protein CLOSCI_01796 [Clostridium scindens ATCC 35704]
gi|167663006|gb|EDS07136.1| hypothetical protein CLOSCI_01796 [Clostridium scindens ATCC 35704]
Length = 311
Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 23/213 (10%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDV 202
P T A+ I+ + + + LLD+ + + ++ A GV
Sbjct: 93 VAGPMTTAT------SIRSLEAILKDSVRRKEDLHRLLDYCVECNLSWIRAVTKEFGVLP 146
Query: 203 IQIFDTHA--GCLGEHEFENYAARSVGRIISAVRR---KYPNAKFISFAKGAGYMLKNYR 257
+ I + A L + +F + + +I+ ++ + P KG L
Sbjct: 147 VNIAEPAASLSVLSKKQFLEFEKPHLQDMIAGIKEITGRMPTTHICGKTKGIWEDLIEM- 205
Query: 258 RLTDSNAIGLDWSVPLSFALE-LQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSG- 315
++ +D S L + + GN+ P+ ++ + + + +++ L G
Sbjct: 206 ---GFTSLSVDNSEDLEEVKHCVGDRMRISGNVPPVEVLKYG-TIDEVIASVISCLKKGS 261
Query: 316 ----PFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ G + P V +N+ + R
Sbjct: 262 DSPMGYALAAGCQVPPGVPRENLYAYIYAARKY 294
>gi|315612438|ref|ZP_07887351.1| clan AA aspartic protease [Streptococcus sanguinis ATCC 49296]
gi|315315419|gb|EFU63458.1| clan AA aspartic protease [Streptococcus sanguinis ATCC 49296]
Length = 332
Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/337 (13%), Positives = 103/337 (30%), Gaps = 43/337 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+K+ +L+ +G ++ P+ + + F P E +
Sbjct: 1 MSEKKEWVLKAFKGEKVDRVPVGF-------WHHFTSEDEWLHGF----SNPAII-EKNI 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ +R+ + F ++ N + + + QE+ + P ++
Sbjct: 49 EGHKRFIREVQPDFIKLMSDGYFAYPNPAIAKGK-------SLQELATIQPLGPEH-AWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++++ I I AP T +++ D F ++ +A +
Sbjct: 101 KEQVALVQKIKQEFTEDIVAIYNIFAPVTYLKWLLGEVSGGDDLIAD-FLVEDPKALKKV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD +++ A A I AG D I + + +++ +
Sbjct: 160 LDVIAEDIASLSRAVIEEAGADGIYL---SVQSIQDQRVSAADYQA-VIAPSEITVLEAA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
+ G + D A +W+V L E+ K V G
Sbjct: 216 SAVGGVTVLHIC-GYEGARNDIHLFADYPAQVFNWAVGPEGITLKEGREIFKGHTVLGGF 274
Query: 290 DP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLG 322
+ L G + ++ G + LG
Sbjct: 275 ENGKTGLLYTGSKDAIQAEAKKLVAEAGEQGLV--LG 309
>gi|322373225|ref|ZP_08047761.1| hypothetical protein HMPREF0848_00933 [Streptococcus sp. C150]
gi|321278267|gb|EFX55336.1| hypothetical protein HMPREF0848_00933 [Streptococcus sp. C150]
Length = 332
Score = 62.6 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 99/333 (29%), Gaps = 41/333 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+++ +L+ +G ++ P+ + + F PE E
Sbjct: 1 MSEKRELVLKAFRGESVDRVPVGF-------WHHFTTEDEWLHGF----ENPEII-EKNK 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+++ + F ++ F P + L + ++
Sbjct: 49 AGHKKFIAEVKPDFVKLMSD--------GFFAYPQPSFKDFKSISDLTLIEPLGANHPWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ + L P I I AP T +++ D + ++ A +
Sbjct: 101 SAQVELVKSLIADFPEDIVAIYNIFAPVTYFKWLVGNVSGGDDNIAD-YISEDRDALKHV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD + A I AG D I + + + ++ A S ++ A
Sbjct: 160 LDVIGQDIASLSQRVIKEAGADGIYL---SVQSIQDKRVTADTYRDFIAPSELSVLKAAD 216
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGNL 289
I G + + D A ++W+V L+ + V G
Sbjct: 217 EA--GGHNILHICGYEGARNDIKLFKDYPAQVINWAVGPEGISLAEGRNIFGGRTVLGGF 274
Query: 290 DP---MRLV-VGNQVMIDGVNAILDVLGSGPFI 318
+ L + + + V I+ G+ I
Sbjct: 275 ENGKDGLLYNGSKEAIQEKVKEIIADTGTHGLI 307
>gi|150401030|ref|YP_001324796.1| uroporphyrinogen-III decarboxylase-like protein [Methanococcus
aeolicus Nankai-3]
gi|150013733|gb|ABR56184.1| Uroporphyrinogen-III decarboxylase-like protein [Methanococcus
aeolicus Nankai-3]
Length = 267
Score = 62.6 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 207 DTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG 266
D A +G +E + + +I ++ A G + + + D + +
Sbjct: 138 DPTAPFIGPKMYEEFGIPYLKKIFRFIKSY--GAPVFLHICGELTPIIDQLKKLDIDVLS 195
Query: 267 LDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
+ S+ + AL + + GN+ P ++ N + +N ++ G I G +
Sbjct: 196 FEDSLGVVGAL----DCVLMGNIKPKDML--NDCIDSKINQVIKNKGKQ-HIIATGCELL 248
Query: 327 PQVDPKNVLDLVKT 340
P KN++ L+ +
Sbjct: 249 PNTPEKNIIKLINS 262
>gi|300856632|ref|YP_003781616.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300436747|gb|ADK16514.1| predicted Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 368
Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/374 (16%), Positives = 121/374 (32%), Gaps = 53/374 (14%)
Query: 2 NERKQKILEVLQGNVINPPPI------WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT 55
NER +I + + + P+ +L AG L +Y E +
Sbjct: 9 NERLTRIKKAIALEKPDRTPVIPYADAFLANVAGVKLSDY-------------VSNLEIS 55
Query: 56 VELTLQPIRRYNFDAA------------ILFSDILVIADALGRNVRFVENEGPRM----- 98
++ + + + FD + I FS+I + L N + +E M
Sbjct: 56 NKVQIDGAKMFRFDGSSGTFSNAAMMGMIFFSNIKLPGRELPDNTLWQVDEREYMTVDDY 115
Query: 99 DPITTQEIYLLNPN-----IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
D I + N I++ I K + + + + G Y
Sbjct: 116 DTIIDKGFEEFQNNFYASKINVDFQKTQEIITKAPQFNKNMRDEGYPLYYAGTISHPVDY 175
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--- 210
+ G + + V + ++D ++D + + + I VD I +F
Sbjct: 176 LSGG---RTMAKFMVDIRRIPEKVEAVMDIITDANIKAMKQSIQNAVDPISVFVAMGRGC 232
Query: 211 -GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT-DSNAIGLD 268
+E + + +I AV A F L ++ + D
Sbjct: 233 PDFYNPKLWERFIWNPLKKITYAVIETGLTANF-HIDANWQRSLDYFKDFPKGTCVFETD 291
Query: 269 WSVPLSFALE-LQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
+ + E L ++G++ +L + + + ++ +G G FI G GI
Sbjct: 292 GTTDIYKIKEKLGDRMCIKGDVQAAKLTLGTPDEIYNYSTQLIKDMGRG-FILASGCGIP 350
Query: 327 PQVDPKNVLDLVKT 340
P P+NV +V
Sbjct: 351 PNARPENVKAMVAA 364
>gi|225163810|ref|ZP_03726107.1| Uroporphyrinogen-III decarboxylase-like protein [Opitutaceae
bacterium TAV2]
gi|224801568|gb|EEG19867.1| Uroporphyrinogen-III decarboxylase-like protein [Opitutaceae
bacterium TAV2]
Length = 421
Score = 61.8 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 36/211 (17%)
Query: 146 APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY-LIAQIHAGVDVI- 203
P TVA + F + LLDF+++ + + + + AG+ V
Sbjct: 193 GPMTVACNLFGPSF-----VCETML-DDPERLRRLLDFITEATIQRCVAWRKRAGILVPC 246
Query: 204 -QIF----DTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
+ F D+ A + + + R+ A+ P + I + ++
Sbjct: 247 DKGFGFADDSIA-MISTAAYREHILPHHRRLCDALATPAP--RGIHLCGDSTRHFPILQK 303
Query: 259 LTDSNAIGLDWSVPLSF---ALELQKEGPVQGNLDPMRLV---VGNQVMIDGVNAILDV- 311
N D P++F EL + +QG P + + + + V IL
Sbjct: 304 E--LNIQSFDTGFPVNFGALRRELGPQVLIQGG--PHVQLLHQSTPEQVREAVRDILQSG 359
Query: 312 -LGSGPFIF----NLGHGITPQVDPKNVLDL 337
L G F+ NL P N +
Sbjct: 360 ILDGGRFVLREGNNL----APGTPLDNTEAM 386
>gi|225165666|ref|ZP_03727471.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|224800095|gb|EEG18519.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 348
Score = 61.8 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 90/278 (32%), Gaps = 24/278 (8%)
Query: 64 RRYNFDAAILFSDILVIADAL--GRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
RRY A+ D+ + DAL V + E + + I L+ +
Sbjct: 49 RRYRTPLAMPLMDLTLEKDALLRACGVPAADIEKHHFN--DSVSIPELHSEDIPLTPRMT 106
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR---AFN 178
++I+ + +P+ + + G C P++ + ++S +
Sbjct: 107 ATCRAITHV-AAIPDLVAM-GMCIGPFSFMTKLVSDPITPVFLAGTGLTASDEAEIAIVE 164
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL----------GEHEFENYAARSVGR 228
L + YL AQI A I I + A + F+ Y + R
Sbjct: 165 KTLALAERMIHRYLRAQIEADARAIIICEPAANLVYFSPNQLEENNHAVFDRYVMEPMRR 224
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF-ALELQKEGPVQG 287
I + + F + M++ + L ++ I L S L A + ++ + G
Sbjct: 225 IARLLADAGVDLVFHDCGELTESMIRRFGTL-GASIISLGSSRTLWEDAAFIPRDTVLFG 283
Query: 288 NLDPMRLVVGN---QVMIDGVNAILDVLGSGPFIFNLG 322
NL R + +L + F LG
Sbjct: 284 NLPTKRFYAPQLTVAEVETYAATLLAKMREAAHPFILG 321
>gi|320546928|ref|ZP_08041230.1| hypothetical protein HMPREF0819_0636 [Streptococcus equinus ATCC
9812]
gi|320448446|gb|EFW89187.1| hypothetical protein HMPREF0819_0636 [Streptococcus equinus ATCC
9812]
Length = 333
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 58/336 (17%), Positives = 109/336 (32%), Gaps = 50/336 (14%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIR--KKFKNFLDMCYTPEYTV 56
M +++ +L+ + ++ P+ W Y ++ F PE
Sbjct: 1 MTTKREWVLQAFKNEPVDKVPVGFW-----------YHFTTDEERSDGF-----NPE-IF 43
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF 116
+ +++ D F I+ N + E IT+ + +I
Sbjct: 44 NKNIAGHKKFVADVNPDFVKIMSDGFFTYPNEQIREG-------ITSIKELEGITSIGEN 96
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
++ + +R P I AP T + ++G F +++
Sbjct: 97 HPWIEKQIELAKKIRDDFPEDIASFYNIFAPTTYLKWHLAGKGGNGDTIIEDFIKEDAEL 156
Query: 177 FNWLLDFLSDVSAEYLIAQIH-AGVDVIQIF-----DTHAGCLGEHEFENYAAR-SVGRI 229
+LD ++ I AGVD I + D+ L E+++ + +
Sbjct: 157 TKTVLDVIAFDIGLLTKRLIEEAGVDGIYLSVQNLQDS---RLSRKEYDHVIKPGELHIL 213
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGP 284
A+ N I +GA + Y T A ++W+V LS EL
Sbjct: 214 NRAISSGGTNILHICGYEGATNDISYY---TGYPADVINWAVELEGVSLSEGRELFGRKT 270
Query: 285 VQG---NLDPMRLV-VGNQVMIDGVNAILDVLGSGP 316
V G N + L + + + V ILD +G
Sbjct: 271 VLGGFRNTENDLLYQGSKEAIQNKVREILDEIGRKG 306
>gi|269838470|ref|YP_003320698.1| uroporphyrinogen decarboxylase (URO-D) [Sphaerobacter thermophilus
DSM 20745]
gi|269787733|gb|ACZ39876.1| Uroporphyrinogen decarboxylase (URO-D) [Sphaerobacter thermophilus
DSM 20745]
Length = 332
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/363 (14%), Positives = 108/363 (29%), Gaps = 65/363 (17%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
R +++ L G ++ P+ L R +F + + E ++TL
Sbjct: 11 TRWERVEAALAGREVDRVPVSLWR-----------------HFPNQDQSAEALADVTLAW 53
Query: 63 IRRYNFDAAILFSDILVIADALGRNV----RFVENEGPRMD----PITTQEIYLLNPNID 114
R++FD F ++ D + + G P+ + + +
Sbjct: 54 QNRFDFD----FIKLMPPGDYATIDWGAESEYQGAPGGTRQTTRFPVVELDDWRRITPVA 109
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ ++ ++ ++L + ++ +P TVA + G + +
Sbjct: 110 PDQGMNREVVEAARLVNERLGGEVPVLQTIFSPLTVAMKLSDG-------KVLAHLRERP 162
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHEFENYAARSVGRIIS 231
+ L +++V+ L A + G I F T + E+ + R
Sbjct: 163 DVVHAALAVITEVTRGVLTASLERGAGGI-FFATQCATTDLMTVEEYREFGVRY------ 215
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYR-------RLTDSNAIGLDW---SVPLSFAL-ELQ 280
+ + A G+ + L + L L+W S A E
Sbjct: 216 -------DLPVLEAAAGSRFTLLHLHGTNIMFDELKTYPVHALNWHDRRTSPSLAEGERA 268
Query: 281 KEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIF-NLGHGITPQVDPKNVLDLVK 339
V G +D +V +G + G I + +V
Sbjct: 269 SGHCVVGGIDEKGIVDTTPDAAAAQARDAIAALTGRHVMVAPGCVIPVATPEATIQAVVD 328
Query: 340 TVR 342
VR
Sbjct: 329 AVR 331
>gi|325688941|gb|EGD30949.1| hypothetical protein HMPREF9382_2033 [Streptococcus sanguinis
SK115]
Length = 335
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 103/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 1 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 47
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D + + +I
Sbjct: 48 VEGHAAYVRAARPDFVKIMSDGFFKYPSTLYS-----------DHVESIRDLAAIQSIGE 96
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ + + ++ P AP + + + F ++
Sbjct: 97 YHPWIEQQIEIVKAVKASYPEDFASFYNIFAPVSYLKRWFRREGARGDREIADFLAEDPE 156
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG + I QI D G + + Y S ++
Sbjct: 157 LTGHVLDVIAGDIAILTRRIIEEAGTEGIYLSTQQIQD---GRVDAASYRRYIEPSTIKV 213
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 214 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 270
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 271 TVLGGFENGRAALLNTGSRAELEAETKRLLAAAGSQGVI--LG 311
>gi|324989773|gb|EGC21716.1| hypothetical protein HMPREF9388_1964 [Streptococcus sanguinis
SK353]
Length = 348
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 53/344 (15%), Positives = 102/344 (29%), Gaps = 55/344 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-NNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-DPITTQEIYLLNPNID 114
VE +R D + SD F + P D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSD------------GFFKYPSPLYSDHIESIRDLAAIQSIG 108
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
++ + + ++ + +P + + + F ++
Sbjct: 109 EHHPWIEQQIEIVKAVKASYSEDLASFYNIFSPVSYLKRWFRREGSRGDREIADFLAEDP 168
Query: 175 RAFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGR 228
+LD ++ A I AG++ I QI D G + + Y S +
Sbjct: 169 ELTGHILDVIAGDIAILTRRIIEEAGIEGIYLSTQQIQD---GRVDGASYRRYIEPSTVK 225
Query: 229 IISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKE 282
++ A N I +GA L ++ A +W+ V L+ +L
Sbjct: 226 VLEAANAAGGQNILHICGFEGASNDLDLFKDYP---AQVFNWATHHEGVSLAEGSKLFGG 282
Query: 283 GPVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L G I LG
Sbjct: 283 QTVLGGFENGRAALLNTGSRAELEAETKRLLAAAGRQGVI--LG 324
>gi|300855251|ref|YP_003780235.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435366|gb|ADK15133.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 370
Score = 61.0 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/383 (14%), Positives = 117/383 (30%), Gaps = 69/383 (18%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQ--AGRYLPEYRQIRKKFKNFLDMC--YTPEYTVE 57
NER + + L + P+ LM A R++ D+C + + + +
Sbjct: 9 NERLDRFRKTLALEKTDRTPVILMNDSFAARHM---------GLKLADICGKDSVKVSNK 59
Query: 58 LTLQPIRRYN-FDAAILFSDI--LVIADALGR----------NVRFVENEGPRMDPITTQ 104
+ + ++ D + L + + R ++ + +E M P
Sbjct: 60 VIIDSLKDLGDVDGVNSSYSVGPLFPLEFMSRVKLPGRELADDMLWQIDEAEMMKPEDYD 119
Query: 105 EI--------------YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC----GA 146
I L N+D + Q+ ++ GF A
Sbjct: 120 TIINKGWNNFMPGYLKDRLGINVDEIMADAAYAPQA--------DQNVKDAGFVVYSPAA 171
Query: 147 PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF 206
TV Y+ G + ++ ++ LD + E + QI A + +F
Sbjct: 172 VITVNEYLSGGRSMAKFMRD---LFRMPDKVEETLDVIQAEVVEGIRKQIRATKPDV-LF 227
Query: 207 DTHA----GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--T 260
+ A +E + + + AV + G +Y +
Sbjct: 228 LSPARGASEFYSPKLWERFVWKYIKETADAVIEE--GTICSIHIDGNWERDLDYFKDFPK 285
Query: 261 DSNAIGLDWSVPLSFALE-LQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPF 317
D + E L ++G++ P ++ + D + ++ +G G F
Sbjct: 286 GKIVFETDGVTDIYKIKEKLGDRMCIKGDV-PAGKLVLGTPDEVYDYASKLVKDMGDG-F 343
Query: 318 IFNLGHGITPQVDPKNVLDLVKT 340
I G + P +NV ++
Sbjct: 344 ILASGCSVPPNAKVENVKAMISA 366
>gi|255279748|ref|ZP_05344303.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269521|gb|EET62726.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 313
Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 40/240 (16%)
Query: 127 ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD 186
I +R++ + L P+ AS + ++ + A + + ++D
Sbjct: 92 IRGIRQEAGEDVLLFQTMFGPFKAASIAFGDDVL------MKYSKEAPEAVSAGIKIIAD 145
Query: 187 VSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVRRKYPNAKFIS 244
E+ ++AG D I G + E+E +I+ ++ +
Sbjct: 146 ALEEWARGYLNAGADGIYYSAQFGEEGRFTKTEWETLVKPYDLQILQVAQQAEEKYNILH 205
Query: 245 FAKGAGYMLKNYRR-LTDSNAIGLDWSV-----PLSFALELQKEGPV-----QGNLDPMR 293
Y + + D A ++WSV L E + +GN+
Sbjct: 206 ICGEPEYHFRTHVDWFADYPADLVNWSVKDNGYSLEKGRETFSCAILGGMNNKGNI---- 261
Query: 294 LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVD---------PKNVLDLVKTVRSE 344
L + + + V ILD G+ GI D P+ + V
Sbjct: 262 LNGPVEAIEEEVKEILDAFGTT--------GIMIGADCTIQGENIRPEYIKAAVDAAHQY 313
>gi|294053888|ref|YP_003547546.1| Uroporphyrinogen-III decarboxylase-like protein [Coraliomargarita
akajimensis DSM 45221]
gi|293613221|gb|ADE53376.1| Uroporphyrinogen-III decarboxylase-like protein [Coraliomargarita
akajimensis DSM 45221]
Length = 340
Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 25/193 (12%)
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARS 225
+ + L ++D + + + +D I D +G +++ +
Sbjct: 154 MIEEPEFVHELFTKIADYNIAQVTEALKYDIDAIYFGDDWGQQESLIMGYDKWKEFIYPQ 213
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT------------DSNAIGLDWSVPL 273
V R+ AV + +FI + + + D +AI +++ L
Sbjct: 214 VKRMY-AVAKAAGKYQFIHSCGDVDELFPDLIDIGLDCFNPFQPEALDVHAIHKEYNGRL 272
Query: 274 SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
SF L + + P G +I+ ++++ G +IF+ H + V +N
Sbjct: 273 SFWGGLSTQQTL-----P---YKGKADVIEESERLIEMGRKGSYIFSPSHSVESDVPFEN 324
Query: 334 VLDLVKTVRSEKI 346
+L + ++++I
Sbjct: 325 ILAFIDCAKAQEI 337
>gi|213622180|ref|ZP_03374963.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 43
Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 29/43 (67%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVR 89
+C E E+TLQP+RRY DAAILFSDIL I DA+G +
Sbjct: 1 SLCKNAELACEVTLQPLRRYPLDAAILFSDILTIPDAMGLGLY 43
>gi|167759804|ref|ZP_02431931.1| hypothetical protein CLOSCI_02167 [Clostridium scindens ATCC 35704]
gi|167662423|gb|EDS06553.1| hypothetical protein CLOSCI_02167 [Clostridium scindens ATCC 35704]
Length = 341
Score = 61.0 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 60/370 (16%), Positives = 119/370 (32%), Gaps = 56/370 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL-------MRQAGRYLPEYRQIRKKFKNFLDMCYTPE 53
M +++ + +L G + PI + MR G +PE +PE
Sbjct: 1 MMGKREAVKAILDGTGADRIPIIMNAFSLPVMR-YGYTMPE-------------AMMSPE 46
Query: 54 YTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM----DPITTQE-IYL 108
E + + +D + + A +EG + D I + E I
Sbjct: 47 KLTECMVGTRQALGYDGLCAGAYGGI---AAMMGGHLPNSEGKIVGDGDDVIHSFEDIEK 103
Query: 109 LNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV 168
L P + + ++I ++R P + P VA ++
Sbjct: 104 LKPYDPSKCMMMKNVLRTIELMRAAEPEE-PIYAILHVPAAVAFTLMGA------KPAFK 156
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH------AGC-LGEHEFENY 221
+N F L D++ D E + AG+D + G + +E
Sbjct: 157 AMIKNQELFRTLCDYVEDAVVESCKMLVDAGLDFL-----WFPMPNFGGYCISRKSYEKC 211
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
++S R ++ + I + + +A + + E
Sbjct: 212 ISQSNIRANKRIKDYGASI-VIHTCGLYDDRFDLVLKESG-DAWHISDTQTKKVKEEYGD 269
Query: 282 EGPVQGNLDPM---RLVVGNQVMID-GVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ + GN+ P + Q + D +D G FI + ++P +NV +
Sbjct: 270 KVALMGNI-PCCSVLMEGSEQEVYDFAYQECMDGARDGRFILSGDCDVSPLTPDENVKAV 328
Query: 338 VKTVR-SEKI 346
V+ + +EK+
Sbjct: 329 VRAAKDAEKV 338
>gi|73539263|ref|YP_299630.1| uroporphyrinogen decarboxylase [Ralstonia eutropha JMP134]
gi|72122600|gb|AAZ64786.1| Uroporphyrinogen decarboxylase (URO-D) [Ralstonia eutropha JMP134]
Length = 334
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 22/252 (8%)
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ E + ID L ++ + L + ++ +P T A + +
Sbjct: 90 VRRTEDWERIRWIDQRLGAYGQQNIALGQTARSLGGTVPILQTVFSPLTTARKLATERLF 149
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEF 218
D + A + L ++DV+ ++ I + G I A L E+
Sbjct: 150 TDIRC-------HPAALHAALRIITDVTIDFCIEALSVGAHGIFFATQLASHRLLTTAEY 202
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF--- 275
E + + I+ A+R + + A G M + L+D +W L+
Sbjct: 203 EQFGKQYDLEILDAIRGRC-RVNMLH-AHGDDIM---FGLLSDYPVELFNWHDRLTDPDL 257
Query: 276 -ALELQKEGPVQGNLDPMR--LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP-QVDP 331
G + G L+ L G + D V + I G + P +
Sbjct: 258 SRARRHFPGVLVGGLNEHHTLLHGGRNAIADEVQDAVAQTDGRKLIIGPGC-VLPVETSD 316
Query: 332 KNVLDLVKTVRS 343
+ ++ R+
Sbjct: 317 AAIQAVLDAARN 328
>gi|327462739|gb|EGF09061.1| hypothetical protein HMPREF9394_0393 [Streptococcus sanguinis
SK1057]
Length = 348
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/357 (15%), Positives = 107/357 (29%), Gaps = 81/357 (22%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +K+ +L +G ++ P+ W +F+
Sbjct: 14 MASKKELVLRAFRGEEVDRVPVGFWF-------------------HFVS----------- 43
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM-----------------DPI 101
Q + D ++F+ ++ + +V GP D I
Sbjct: 44 --QEEKMLGLDNPVIFN------KSVEGHAAYVRAAGPDFVKIMSDGFFKYPSELYSDHI 95
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
+ +I ++ + + ++ P + AP + +
Sbjct: 96 VSIRDLAAIQSIGEHHPWIEQQIEIVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSR 155
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGE 215
+ F +N ++LD ++ A I AG++ I QI D G + E
Sbjct: 156 GDREIADFLAENPELTGYVLDVIATDIAILTRRIIEEAGIEGIYLSTQQIQD---GRVDE 212
Query: 216 HEFENYAARSVGRIISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS---- 270
+ Y S +++ A N I +GA L+ ++ A +W+
Sbjct: 213 TSYRRYIEPSTIKVLEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHE 269
Query: 271 -VPLSFALELQKEGPVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V L+ +L V G + R + +L GS I LG
Sbjct: 270 GVSLAEGRKLFGGQTVLGGFENGRAALLNTGSRAELEAETKRLLVETGSQGVI--LG 324
>gi|323350551|ref|ZP_08086213.1| hypothetical protein HMPREF9398_0261 [Streptococcus sanguinis
VMC66]
gi|322123233|gb|EFX94918.1| hypothetical protein HMPREF9398_0261 [Streptococcus sanguinis
VMC66]
Length = 348
Score = 60.6 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 56/343 (16%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAEIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ + + ++ P + AP T + + F +N
Sbjct: 110 YHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVTYLKRWFRREGSRGDREIADFLAENPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG + I QI D G + + +Y S ++
Sbjct: 170 LTGQVLDVIAGDIAILTRRIIEEAGTEGIYLSTQQIQD---GRVDAASYRSYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTSSRAELEAETKQLLAETGSQGVI--LG 324
>gi|325263337|ref|ZP_08130072.1| putative methylthiol:coenzyme M methyltransferase [Clostridium sp.
D5]
gi|324031730|gb|EGB93010.1| putative methylthiol:coenzyme M methyltransferase [Clostridium sp.
D5]
Length = 384
Score = 60.2 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 75/226 (33%), Gaps = 32/226 (14%)
Query: 135 PNHITLIGFCG--APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
P + G P+T+A +I ++ Q+ LLD++++V
Sbjct: 168 PLGKPGMSGMGTDGPFTIACSLIGA----TQACMDLYVDQD--YMMELLDYITEVVIARN 221
Query: 193 IA------QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
A Q D+ A L + +I+ + +I
Sbjct: 222 KALRRYYGQPEKSKSFGFADDSIA-LLSLDTYTELILPFHKKIVREL-STGEEPGWIHLC 279
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLS---FALELQKEGPVQGNLDPMRLVVGN-QVMI 302
A + NA D P+ EL + V+G + L G + +
Sbjct: 280 GDASRFFPTLVKE--LNAGTFDTGFPIDHGKVVRELGPDITVKGGVHVETLRTGTAEEIA 337
Query: 303 DGVNAILDVLG--SGPFIF----NLGHGITPQVDPKNVLDLVKTVR 342
+ V ILD + + FI NL +P P+N+L + + VR
Sbjct: 338 NAVKLILDAVKPFTRKFIIKEANNL----SPGTPPENLLAMHEAVR 379
>gi|239624872|ref|ZP_04667903.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521258|gb|EEQ61124.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 321
Score = 60.2 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 21/248 (8%)
Query: 90 FVENEGPRMDPITTQEI-YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW 148
EN P I T + L P + + ++ + + +G
Sbjct: 56 MNENLIPVFGTIHTPDDYNRLIPRMTMEDGFMKDQMALTKEILAGCDKDVFTMGTLHGIC 115
Query: 149 TVASYMISGGFIKDHG----QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
+ I I Q + + + + ++DV + + I AG+D +
Sbjct: 116 ASGIHPIEQAGINYFAARQMQVDFLRWDEEKMLSA-MQRITDVLCDLARSYIEAGLDSV- 173
Query: 205 IFDTHAGC---LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM--LKNYRRL 259
+ + G + EF + +++ A++ F+ K M ++Y
Sbjct: 174 YYASLGGEECFFTDEEFARWIKPFEIQVMKAIKD-AGGYCFLHICKDGLNMERYRDYAPY 232
Query: 260 TDSNAIGL-DWSVPLSFALELQKEGPVQGNLDPMR----LVVGNQVMIDGVNAILDVLGS 314
D G+ + L EL + G L P R + + + V ++ G
Sbjct: 233 ADVVNWGVFEVPYDLEKGRELFGGKTLMGGL-PNRHGVLVDGSDAGIEAEVRKVISDFGR 291
Query: 315 GPFIFNLG 322
I LG
Sbjct: 292 KGLI--LG 297
>gi|310827183|ref|YP_003959540.1| hypothetical protein ELI_1591 [Eubacterium limosum KIST612]
gi|308738917|gb|ADO36577.1| hypothetical protein ELI_1591 [Eubacterium limosum KIST612]
Length = 382
Score = 60.2 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 43/278 (15%)
Query: 99 DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLI---GFCGAPWTVASYMI 155
+P + + ++ + + + + L F GA + VA+YM
Sbjct: 113 NPPLADATIEDLEDYEWPDPSDPKRYEGLREEMQMVRDKSDLAILAKFAGAVFEVATYMR 172
Query: 156 SGG-FIKDHGQNRVFAYQNSRAFNWLLDF-----------LSDVSAEYLIAQIHAGVD-V 202
+ +D N + LLD D EY+ +G D
Sbjct: 173 GHERWYRDL-------VNNQEFAHALLDKVCKIQKEIDRVCIDAVGEYVDILRLSGEDLG 225
Query: 203 IQIFDTHAGCLGEHEFENYAARSVGRII----SAVRRKYPNAKFISFAKGAGYMLKNYRR 258
Q D+ + F + + + + +K P K + + G +
Sbjct: 226 TQ--DSP--LISPRTFRKVVKPHLEELWVSAKTELLKKNPQGKVMLHS--CGSIRPFIPD 279
Query: 259 LTDSNAIGLD-------WSVPLSFALELQKEGPVQGNLDPMRL--VVGNQVMIDGVNAIL 309
L D LD E + GN+D ++ + V +
Sbjct: 280 LIDCGIDILDPVQPGANHMNRYELKQEFGDQIVFHGNIDIQKILPFGTKDEITGEVRDAI 339
Query: 310 DVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
L G F+ + H + V +N++ +++ +
Sbjct: 340 KALAPGGGFLLSPAHNVQSDVSAENLVHMIECAHEFGV 377
>gi|213423806|ref|ZP_03356786.1| uroporphyrinogen decarboxylase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 34
Score = 59.9 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 309 LDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
L G G +FNLGHGI V P++ V+ V
Sbjct: 1 LAGFGQGEGHVFNLGHGIHQDVPPEHAGAFVEAV 34
>gi|300855929|ref|YP_003780913.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300436044|gb|ADK15811.1| predicted Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 369
Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 16/197 (8%)
Query: 153 YMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA-- 210
Y+ G + + ++D ++D + + + I VD I +F
Sbjct: 176 YLSGGRTLSKFMMDMRRM---PEKIQAVMDIIADANIKEMKQAIKKTVDPISVFIAMGRG 232
Query: 211 --GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT-DSNAIGL 267
+E + + + +I A+ A F + A L ++ +
Sbjct: 233 CPDFYSTELWEKFIWKYLKKITDAIIETGVTANFHADANWERG-LDYFKDFPKGTCVFET 291
Query: 268 DWSVPL-SFALELQKEGPVQGNLD---PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGH 323
D + + +L ++G D ++ + + ++ +G+G FI + G
Sbjct: 292 DGTTDIYKIKKKLGGSICIKG--DVQAAKLVLGTPDEVYNYSTQLIKDMGNG-FILSSGC 348
Query: 324 GITPQVDPKNVLDLVKT 340
I P +NV +V
Sbjct: 349 SIPPNAKVENVKAMVSA 365
>gi|324995963|gb|EGC27874.1| hypothetical protein HMPREF9392_0395 [Streptococcus sanguinis
SK678]
Length = 348
Score = 59.5 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 52/354 (14%), Positives = 105/354 (29%), Gaps = 75/354 (21%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +K+ +L +G ++ P+ W +F+
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF-------------------HFVS----------- 43
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVR---------FVEN--EGPRM---DPITTQ 104
Q + D ++F+ + + VR + + P D I +
Sbjct: 44 --QEEKMLGLDNPVIFNKSV---EGHAAYVRAAWPDFVKIMSDGFFKYPSALYSDHIESI 98
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
+I ++ + + ++ P + AP + +
Sbjct: 99 RDLAAIQSIGEHHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDR 158
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEF 218
+ F ++ +LD ++ A I AG++ I Q+ D G + +
Sbjct: 159 EIADFLAEDPELTGHVLDVIAGDIAILTRRIIEEAGIEGIYLSTQQVQD---GRVDATSY 215
Query: 219 ENYAARSVGRIISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VP 272
Y S +++ A N I +GA L+ ++ A +W+ V
Sbjct: 216 RRYIEPSTVKVLEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVS 272
Query: 273 LSFALELQKEGPVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
L+ +L V G + R + +L GS I LG
Sbjct: 273 LAEGRKLFGGQTVLGGFENSRAALLNTGSRAELEAETKRLLAETGSQGVI--LG 324
>gi|225403181|ref|ZP_03760478.1| hypothetical protein CLOSTASPAR_04509 [Clostridium asparagiforme
DSM 15981]
gi|225043186|gb|EEG53432.1| hypothetical protein CLOSTASPAR_04509 [Clostridium asparagiforme
DSM 15981]
Length = 322
Score = 59.5 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 59/338 (17%), Positives = 109/338 (32%), Gaps = 58/338 (17%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
MN+R ++++ ++G ++ P +G + +F + C + V L
Sbjct: 1 MNKR-ERVVAAIRGERVDCVP------SGFSI-----------HFPEGCKEGQAAVNAHL 42
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+ + + D + ++ LV G P ++ +L P
Sbjct: 43 RFFQETDTDIIKIMNENLVPYM------------GEIEKPEDFRKYRILGPEE------- 83
Query: 121 LPIFQSISILRKKLPNHITLIGFCGA-----PWTVASYMISGGFIKDHGQNRVFAY---- 171
I + + R+ L G P + M +G D+ + R+F
Sbjct: 84 AFITDQVRLTREILSGADPEAFSLGTLRGITPSMIHPLMAAGM---DYEKARLFVRDSLR 140
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI--QIFDTHAGCLGEHEFENYAARSVGRI 229
+N ++D AGVD I A + EFE + ++
Sbjct: 141 ENPEPVLEAAQRVADGLCHLARGYREAGVDGIYYAALGGEADIFTDEEFERWVKPFDLQV 200
Query: 230 ISAVRRKYPNAKF-ISFAKGAGYMLKNYRRLTDSNAIGL-DWSVPLSFALELQKEGPVQG 287
+ A+R I A + Y D G+ + PL+ EL + G
Sbjct: 201 MRAIRESGAYCFLHICKAHLNMERYRGYTPYADVVNWGVYEAPYPLTRGRELFGGTTIMG 260
Query: 288 NLDPMRLV---VGNQVMIDGVNAILDVLGSGPFIFNLG 322
L V + + V+ I+ +G FI LG
Sbjct: 261 GLANQEGVITDGTEEEIRAEVSRIIREVGREGFI--LG 296
>gi|325686604|gb|EGD28630.1| hypothetical protein HMPREF9381_1948 [Streptococcus sanguinis SK72]
gi|327468425|gb|EGF13910.1| hypothetical protein HMPREF9386_1753 [Streptococcus sanguinis
SK330]
Length = 348
Score = 59.5 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 105/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MISKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-NNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D + + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHVESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP + + + F ++
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDPE 169
Query: 176 AFNWLLDFLS-DVSAEYLIAQIHAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ D+S G D I Q+ D G + E + Y S ++
Sbjct: 170 LTGHVLDVIAGDISILTRRIIEETGTDGIYLSTQQVQD---GRVDEASYRRYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAKGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + + +L GS I LG
Sbjct: 284 AVLGGFENGRAALLNTGSRAELENETKRLLAETGSQGVI--LG 324
>gi|239628505|ref|ZP_04671536.1| uroporphyrinogen decarboxylase [Clostridiales bacterium 1_7_47_FAA]
gi|239518651|gb|EEQ58517.1| uroporphyrinogen decarboxylase [Clostridiales bacterium 1_7_47FAA]
Length = 332
Score = 59.1 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 78/230 (33%), Gaps = 23/230 (10%)
Query: 120 LLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW 179
+ ++ + + ++ P T A+ M + V ++ AF+
Sbjct: 113 MAATIEAAKGVVDHYKGEVPVVITIFNPLTTAAKMSGD-------KMLVHMRRSPEAFHK 165
Query: 180 LLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHEFENYAARSVGRIISAVRRK 236
L+ + + + G D I F + G + E+E + R++ A +
Sbjct: 166 GLEIICQTTINLVKEMSKLGADGI-FFASQLGTYDKMSVAEYEEFGRPYDLRVLEAAQDM 224
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS---VPLSFAL-ELQKEGPVQGNLDPM 292
+ N I G M + + L+W V +S A + + G ++ +
Sbjct: 225 WFN---IMHMHGNAPMFELLSQYP---VQALNWHDQLVDISLADGRRMSDKLLIGGVEEL 278
Query: 293 RLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
+++ ++ + + + L+ + G I G + V + +
Sbjct: 279 KVLAEADDEQLKAHLKSSLEQVPDGRLILAPGCCVPLYVPEDRLARAQEA 328
>gi|327488815|gb|EGF20614.1| hypothetical protein HMPREF9395_2103 [Streptococcus sanguinis
SK1058]
Length = 348
Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/343 (16%), Positives = 106/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-NNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D + + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHVESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP + + + F ++S
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDSE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG++ I QI D G + + Y S ++
Sbjct: 170 LTGHVLDVIATDIAILTRRIIEEAGIEGIYLSTQQIQD---GRVDAASYRRYIEPSTIKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGHKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + D +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTGSRAELEDETKRLLAAAGSQGVI--LG 324
>gi|300855675|ref|YP_003780659.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435790|gb|ADK15557.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 370
Score = 59.1 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 77/214 (35%), Gaps = 21/214 (9%)
Query: 138 ITLIG--FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ 195
+ +IG GAP+ + +G IK+ ++ + ++D +++ E L
Sbjct: 163 VAIIGNAMVGAPYET---LFAGRSIKNFVKD---LIRIPDKVIAVMDVMAEEGYEDLRKA 216
Query: 196 IHAGVDVIQIFDT----HAG-CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
I A + +F + AG + + FE +A + + + + A +
Sbjct: 217 IRAD-KPLAVF-SGGSRMAGDFISQKAFEKFAWPYLKKGVEVAVEE--GANVYLHSDLCW 272
Query: 251 Y-MLKNYRRLTDSNAI-GLDWSVPLSFALELQK-EGPVQGNLDPMRL-VVGNQVMIDGVN 306
L L I D + + A E+ K + G++ P L + + +
Sbjct: 273 DRFLDYLCDLPKGKCIFHPDSTTDIFKAGEVLKGHMCIMGDVSPSLLTLGTPDEVYEYSR 332
Query: 307 AILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKT 340
++D S FI G I +NV +V
Sbjct: 333 KLIDQFASQGFIMAAGCCIPANAKVENVKAMVTA 366
>gi|253578818|ref|ZP_04856089.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849761|gb|EES77720.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 315
Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 78/275 (28%), Gaps = 34/275 (12%)
Query: 90 FVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWT 149
+ P IT + + + + I +RK+ + + P+
Sbjct: 55 MQDYPYPISGKITCADDWYHIQVKGTDSEEFAKMAEIIRGIRKEAGKDVLIFQTMFGPFK 114
Query: 150 VASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH 209
AS + ++ + A + ++D E+ + AG D I
Sbjct: 115 AASMTFGDDVL------MKYSKEAPEAVAAGVKIIADALEEWTKGYLEAGADGIYYSAQF 168
Query: 210 A--GCLGEHEFENYAARS---VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
G ++E+E + ++ + KY + + + ++
Sbjct: 169 GEIGRFEKNEWEELVCPYDLQILKVAEEMPEKYNILHICGEPEYQFETHVEWFKNYPADL 228
Query: 265 IG---LDWSVPLSFALELQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIF 319
I D L EL + G ++ L + + V ILD G+
Sbjct: 229 INWSVKDNHFSLEQGRELYSSAIL-GGMNNKGNVLNGSEDAIREEVKGILDAFGTK---- 283
Query: 320 NLGHGITPQVD---------PKNVLDLVKTVRSEK 345
GI D + V+ + K
Sbjct: 284 ----GIMIGADCTIQGENISLDLIKTAVEAAHAYK 314
>gi|187779856|ref|ZP_02996329.1| hypothetical protein CLOSPO_03452 [Clostridium sporogenes ATCC
15579]
gi|187773481|gb|EDU37283.1| hypothetical protein CLOSPO_03452 [Clostridium sporogenes ATCC
15579]
Length = 292
Score = 58.7 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/218 (21%), Positives = 86/218 (39%), Gaps = 19/218 (8%)
Query: 45 FLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GPRMDPIT 102
F D+ + L+ IR YN D +I+ + V A+ALG + + + GPR+ T
Sbjct: 31 FPDVHKNAKDMAVLSK-SIREYNEDLFSIVPFCMTVEAEALGGEINLGDEKAGPRVSTYT 89
Query: 103 --TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ E ID + + +S+ IL+K+ T+I P+T+ S +I
Sbjct: 90 FKSIEDIKGLKEIDFETKRMGEVLKSVEILKKEGE---TVIMDVQGPFTIISSLI----- 141
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG---CLGEHE 217
D +N L++ + S E++ + GVD+I D+ AG LG
Sbjct: 142 -DPRIFYKAVRKNKDEVERLMEIVEKSSVEFIKEGVKRGVDIISFGDS-AGTLDILGPKM 199
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
++ + ++ + ++ I L
Sbjct: 200 YKELGGKYTYNVLKEAKNYLEDS-IIHLCGITSSSLDR 236
>gi|325695477|gb|EGD37377.1| hypothetical protein HMPREF9383_0408 [Streptococcus sanguinis
SK150]
Length = 348
Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 103/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEY---T 55
M +K+ +L +G ++ P+ W + + L + PE +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPEIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP + + + F +
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLADDPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I A ++ I Q+ D G + + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTRRIIEEADIEGIYLSTQQVQD---GRVDAASYRLYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LDAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTGSRAELEAETKQLLAETGSQRVI--LG 324
>gi|125718890|ref|YP_001036023.1| hypothetical protein SSA_2105 [Streptococcus sanguinis SK36]
gi|125498807|gb|ABN45473.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 348
Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 56/343 (16%), Positives = 107/343 (31%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
++ + + ++ P + AP + + + F ++S
Sbjct: 110 HHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDSE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I AG++ I QI D G + E + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTRRIIEEAGIEGIYLSTQQIQD---GRVDEASYRRYIEPSTIKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGQNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + + +L GS I LG
Sbjct: 284 AVLGGFENGRAALLNTGSRAELENETKRLLAETGSQGVI--LG 324
>gi|20093342|ref|NP_619417.1| hypothetical protein MA4558 [Methanosarcina acetivorans C2A]
gi|19918704|gb|AAM07897.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 646
Score = 58.3 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/370 (12%), Positives = 116/370 (31%), Gaps = 53/370 (14%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIR 64
+ + + ++ P++ + G +RK + + + V+ +
Sbjct: 288 DRTVSAMSDKKVDRLPVYPL-ACG-------VLRKFAPVTYKEYATNEDAFVQSAYLGSK 339
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D + D+ + + LG V+F E + P + + P + +
Sbjct: 340 YLDLDMFVGLIDLSITSADLGCGVKFPEEDTPSSEGHLEDYEKIEVPEVKEG-TRAYELI 398
Query: 125 QSISILRKKLPNH--ITLIGFCGAPW-TVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ + + KL + ++GF P T+ M + + D N +
Sbjct: 399 KATKLAKAKLNSELATPMVGFHEGPLLTLTQLMGASRVLGD-------MNTNPDVVLKAV 451
Query: 182 DFLSDVSAEYLIAQIHAGV-DVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
D +D AE A D + I + + +G+ ++ + + V V ++Y
Sbjct: 452 DKCADYVAEVSRAFFEEDACDALCIDNLWSNNVIMGQDDYWKFDGQFVYNKHVPVFKEYN 511
Query: 239 NAKFISFAKGAGYMLKNYRRLT-------------DSNAIGLDWSVPLSFALELQKEGPV 285
I A + + + D +P + K +
Sbjct: 512 QPYIIHNCADAVHYDIQISKFGTALYSYAYYPSGKGKGSYSYDELIP-----KYGKTCCM 566
Query: 286 QGNLDPMRLVVGNQV------------MIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
G +DP++ + + + + A+ + ++ + G I P
Sbjct: 567 MGEVDPIQFLDNSPEGIQKIRNDTESNLRGAIQALKENGFQSKYVMSTGCEIPPGAPLDT 626
Query: 334 VLDLVKTVRS 343
+V V+
Sbjct: 627 SKAMVDVVKE 636
>gi|328944596|gb|EGG38757.1| hypothetical protein HMPREF9397_2085 [Streptococcus sanguinis
SK1087]
Length = 348
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/343 (15%), Positives = 104/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ + + ++ P + AP + + + F ++
Sbjct: 110 YHPWIEQQIEMVKAVKASYPEDLASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDPE 169
Query: 176 AFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ A I G++ I QI D G + + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTRRIIEETGIEGIYLSTQQIQD---GRVDAASYRRYIEPSTVKV 226
Query: 230 ISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEAANAAGGVNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTSSRAELEAETKQLLAETGSQGVI--LG 324
>gi|310827370|ref|YP_003959727.1| hypothetical protein ELI_1778 [Eubacterium limosum KIST612]
gi|308739104|gb|ADO36764.1| hypothetical protein ELI_1778 [Eubacterium limosum KIST612]
Length = 326
Score = 57.9 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/332 (14%), Positives = 105/332 (31%), Gaps = 53/332 (15%)
Query: 29 GRYLPEYRQIRKKFKN-FLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRN 87
GR LPE + ++ F+D C + D S+ +V
Sbjct: 29 GRELPENNESHFIIQDTFMDACE------------YESFAKDPFCFLSEKIVP------- 69
Query: 88 VRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP 147
R EN + + L ++ L + +++ + AP
Sbjct: 70 -RVYENLQKPGSNLANETFLKLGFELNDILERVAGFTETMKK------ANCPPWYLALAP 122
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSD---VSAEYLIAQIHAGVDVIQ 204
+ G F+++ + + ++N + + L+ + HA +
Sbjct: 123 NPLDFI---GAFVRNFDKVLMDIHRNPDEILTICEKLTPVFMAVGKATGQLSHALTGSKR 179
Query: 205 IF-----DTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+F ++ L + E+ + + I + + +S ++L L
Sbjct: 180 VFMPVWYNSF---LSKKEYLKFQWPYIKTIAEGLIAEGF-TPLLSLQGEYDHLLDTLLEL 235
Query: 260 TDSNAIG-LDWSVPLSFALELQKEGPVQGNLDPMRLVVG-NQVMIDGVNAILDVLGSG-P 316
I D + P+ + + + G + L+ + + + V +L+ +
Sbjct: 236 PKGKFIAWFDRTDPIEAKKVIGEHCCIAGGISAAALISKQPEDIDEYVKKLLEEMKKSSG 295
Query: 317 FI----FNLGHGITPQVDPKNVLDLVKTVRSE 344
FI FN GI P +NV + VR
Sbjct: 296 FIYTLPFN---GIGP-AKIENVKAMTAAVRKY 323
>gi|332983364|ref|YP_004464805.1| hypothetical protein Mahau_2859 [Mahella australiensis 50-1 BON]
gi|332701042|gb|AEE97983.1| hypothetical protein Mahau_2859 [Mahella australiensis 50-1 BON]
Length = 391
Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 91/273 (33%), Gaps = 38/273 (13%)
Query: 97 RMDPITTQEIYLLNPNIDLF-LNYLLP-----IFQSISILRKKLPNHITLIGFCGAPWTV 150
DP T E Y+ + DL YL P + + + +++ + + G G P
Sbjct: 114 VADPPTVVEKYIKDIKKDLPKAKYLFPDPSQCSLEPLRLHMERMGDMGAVGGAVGIPG-- 171
Query: 151 ASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV----SAEYLIAQIHAGVDVIQIF 206
G HG Y + +++ L+D+ + Y I AG D I I
Sbjct: 172 ----FQGWVDLIHGGVEAMTYMYYDYHDEIME-LADIHHQYAVAYAKRLIEAGPDFILIG 226
Query: 207 DTHAGCL---GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYML-KNYRRLTDS 262
+ G L F + S+ I R+ + G L + T+
Sbjct: 227 AS--GLLTLQSPSIFRELSLPSIKEITHMARQA--GIPSHLHSCGKERWLVEVLSEETEL 282
Query: 263 NAIGLDWSVPLSFA------LELQKEGPVQGNLDPM--RLVV-GNQVMIDGVNAILDVLG 313
++I P+ + + ++GNL L V + + IL
Sbjct: 283 DSIEPLEQPPMGDCDLAEIKQKFGRRIALKGNLHTTKTMLYGTPKDVKRECLKTILAAGE 342
Query: 314 SGPFIFNLG--HGITPQVDPKNVLDLVKTVRSE 344
G F+ + G G +N+ +V+T R
Sbjct: 343 GGGFVLSTGDQCG--RDTPDENIFTMVETAREF 373
>gi|239628513|ref|ZP_04671544.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518659|gb|EEQ58525.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 343
Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 84/254 (33%), Gaps = 43/254 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +K+++L VL G + + PP+ W R+ E + F E
Sbjct: 1 MWTKKERVLAVLNGELADRPPVSAW------RHFIE--KEHSGVGLF----------AET 42
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG--PRMD--PITTQEIYLLNPNID 114
L R Y++D L +A G F EG P+ P+ + E +
Sbjct: 43 MLDWHRTYDWDYVKLQPRASYYEEAWGGEFDFENYEGVLPKCIKGPVGSAEDLDKITVLP 102
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV------ 168
+++ +++ + + + P ++ + + I +
Sbjct: 103 GNKGPFAEQIEAVKAIQEGVADGAPIFQTMMCPTSILQKLCAVNPIGRYRAASRDDLMVT 162
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--------LGEHEFEN 220
++ + L ++ A+Y IH G +F G L + E+E
Sbjct: 163 LMHEQPELVHRTLKNITATMADYSRQLIHNG-----LFGVFYGATGLSRSTYLTKEEWEE 217
Query: 221 YAARSVGRIISAVR 234
+ ++ A++
Sbjct: 218 FVKPYDLEMMDALK 231
>gi|148379464|ref|YP_001254005.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|153934334|ref|YP_001383843.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. ATCC 19397]
gi|153937728|ref|YP_001387393.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A str. Hall]
gi|148288948|emb|CAL83035.1| putative methylcobamide:CoM methyltransferase [Clostridium
botulinum A str. ATCC 3502]
gi|152930378|gb|ABS35878.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. ATCC 19397]
gi|152933642|gb|ABS39141.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A str. Hall]
Length = 290
Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 20/224 (8%)
Query: 39 RKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GP 96
R K F D+ + L+ IR YN D +I+ + V A+ALG + + + GP
Sbjct: 24 RAGIK-FPDVHKNAKDMAVLSKN-IREYNEDFFSIVPFCMTVEAEALGGEINLGDEKAGP 81
Query: 97 RMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R+ + E ID + + +S+ IL+K+ T+I P+T+ S +
Sbjct: 82 RVSNYTFKSIEDIERLKEIDFKTKRIGEVLKSVEILKKEGE---TVIMDVQGPFTIISSL 138
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
I D +N L+ + S E++ + GVD+I D+ AG
Sbjct: 139 I------DPRIFYKAVRKNKDEVERLMKIVQKGSVEFIKEGVKRGVDIISFGDS-AGTLD 191
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
LG ++ + ++ V+ ++ I L
Sbjct: 192 ILGPKMYKELGGKYTYNVLKEVKNYLGDS-IIHLCGITSSSLDR 234
>gi|219668956|ref|YP_002459391.1| hypothetical protein Dhaf_2932 [Desulfitobacterium hafniense DCB-2]
gi|219539216|gb|ACL20955.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 397
Score = 57.5 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 86/231 (37%), Gaps = 18/231 (7%)
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+++ K + + G AP+ G ++ + L+ L
Sbjct: 174 QAVAHWAKDYGMPLGVSGMVKAPFDTL-----GDTLRGLKGIMRDLRKRPEKILSALEVL 228
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDT-HAGC---LGEHEFENYAARSVGRIISAVRRKYPNA 240
+ Y +A G ++ +F H G L HE++ + + ++I + +
Sbjct: 229 VPHNIYYGLATSE-GERLLPVFLPLHRGSYPFLNPHEWDTFYWPPLKKVIEGLWAQ--GK 285
Query: 241 KFISFAKGAGY-MLKNYRRLTDSNAI-GLDWSVPLSFALELQKEGPVQGNLDPMRL-VVG 297
+ + +A+G L+ L ++ + +D + L + + GN+ +
Sbjct: 286 RTMFYAEGNWNPYLEKIVELPAASIVFHVDQTDIAKAKAVLGHKFCISGNVPNSLMAYGS 345
Query: 298 NQVMIDGVNAIL-DVLGSGPFIFNLGHGITP-QVDPKNVLDLVKTVRSEKI 346
+ D V +L D G FI + GI V +NV+ L++T R +
Sbjct: 346 PAQVSDYVKGLLHDYAADGGFIMDTA-GIMQTDVKVENVIALIETTRQYGV 395
>gi|332359342|gb|EGJ37163.1| hypothetical protein HMPREF9380_2011 [Streptococcus sanguinis SK49]
Length = 348
Score = 57.2 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/343 (14%), Positives = 104/343 (30%), Gaps = 53/343 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M +K+ +L +G ++ P+ W + + L + P +
Sbjct: 14 MVSKKELVLRAFRGEEVDRVPVGFWF------------HFVSQEEKMLGL-DNPVIFNKS 60
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
VE +R D + SD + + D I + +I
Sbjct: 61 VEGHAAYVRAARPDFVKIMSDGFFKYPSALYS-----------DHIESIRDLAAIQSIGE 109
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSR 175
+ ++ + + ++ P AP + + + F ++S
Sbjct: 110 YHPWIEQQIEIVKAVKASYPEDFASFYNIFAPVSYLKRWFRREGSRGDREIADFLAEDSE 169
Query: 176 AFNWLLDFLS-DVSAEYLIAQIHAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRI 229
+LD ++ D++ G++ I Q+ D+ + Y S ++
Sbjct: 170 LTGHVLDVIAGDIAILTKRIIKETGIEGIYLSTQQVQDSRVDATS---YRRYIEPSTVKV 226
Query: 230 IS-AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEG 283
+ A N I +GA L+ ++ A +W+ V L+ +L
Sbjct: 227 LEVANAAGGVNILHICGFEGASNDLELFKDYP---AQVFNWATHHEGVSLAEGRKLFGGQ 283
Query: 284 PVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGPFIFNLG 322
V G + R + +L GS I LG
Sbjct: 284 TVLGGFENGRAALLNTGSRAELEAETKRLLAEAGSQGVI--LG 324
>gi|310829981|ref|YP_003962338.1| hypothetical protein ELI_4441 [Eubacterium limosum KIST612]
gi|308741715|gb|ADO39375.1| hypothetical protein ELI_4441 [Eubacterium limosum KIST612]
Length = 390
Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 28/270 (10%)
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQ-----------SISILRKKLPNH--ITLIGFCGAP 147
I ++ + L P +D Y ++ + L + + +G +
Sbjct: 123 IVSKLLPRLYPALDQPAPYNAYAMTKAALEFGSYMGALEEITASLAHDYGVPALG---SN 179
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA--EYLIAQIHAGVDVIQI 205
TVA + + ++ LD ++ + G +
Sbjct: 180 LTVAPFDYLADQFRGFTGICRDVRKSPDKVKEALDAVTPILVKGATACYPGEKGATFPYV 239
Query: 206 FDT--HAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
F A + + FE + S + I + + I F + + S+
Sbjct: 240 FIPLHMAPYINKKMFEEFYWPSFLKFIDILVNQKGLTLSIFFEGDWERFYPYMQDIPKSD 299
Query: 264 AIG--LDWSVPLSFALELQKEGPVQGNLDPMRL--VVGNQVMIDGVNAILDVLG-SGPFI 318
I +++ + K +QG P+ L Q ID ++D++ G +I
Sbjct: 300 KIIAIMEYGDMKKAKNTIGKNLCLQG-FYPISLLGYGTKQECIDKAKEVIDIMAPGGGYI 358
Query: 319 FNLGHGIT--PQVDPKNVLDLVKTVRSEKI 346
F+L I V+P+N+ + + VR +
Sbjct: 359 FSLDKYILNASDVNPENMKAVNEFVRDYGV 388
>gi|307822391|ref|ZP_07652623.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
gi|307736957|gb|EFO07802.1| uroporphyrinogen decarboxylase [Methylobacter tundripaludum SV96]
Length = 342
Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/361 (12%), Positives = 117/361 (32%), Gaps = 45/361 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIW--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +++ ++G + P++ L+ Q + L + D EY E
Sbjct: 1 MITGMDRLVAAIKGEKADRIPVFCNLLDQGVKEL--------GLASLHDYYQLGEYVAEG 52
Query: 59 TLQPIRRYNFDAAILFSDILVIADAL-GRNVRFVENEGPRMDP--ITTQEIYLLNPNIDL 115
L+ +Y +D + A+ L R + F + P ++ I + + D
Sbjct: 53 QLKMREKYGYDNVWSLFYVGKEAELLGCRKILFSPDGPPNVEHFVIQSYDDIHNLEIPDD 112
Query: 116 FLNYLLPIFQS--ISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
+++ + + + IL++++ + G+ A + + ++ +
Sbjct: 113 IIHHPVFAEELKCLQILKREVGGRYPICGYVTASMALPALLMGMD-----KWFELLFMGP 167
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYA-ARSVGR---- 228
+ LL S ++ A GVDVI + ++ + +
Sbjct: 168 PDVRDELLAKCSLFCQRHIAALRELGVDVIVYANPFGST-------DFVPLPYIIKTGMP 220
Query: 229 -IISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ- 286
+ + + ++++ L ++ ++ +
Sbjct: 221 WMKQDLSAGTQGIVYYCGGARFNQVIESVISQIGIETYYLSPLDDIATGKQIINGRGLTC 280
Query: 287 G--NLDPMRLVVGNQVMIDGVNAILDV-LGSGPFIFNLGHG--ITP-QVDPKNVLDLVKT 340
G N D + + + V +L + F+F G + P ++ +N+ ++
Sbjct: 281 GVIN-DIKLIDWSEEQIRQEVKRMLAAGMAGNKFLF----GTILMPYKIPERNIRAMLDA 335
Query: 341 V 341
V
Sbjct: 336 V 336
>gi|184155292|ref|YP_001843632.1| hypothetical protein LAF_0816 [Lactobacillus fermentum IFO 3956]
gi|227514611|ref|ZP_03944660.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
gi|183226636|dbj|BAG27152.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
gi|227087022|gb|EEI22334.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
Length = 337
Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 48/366 (13%), Positives = 113/366 (30%), Gaps = 51/366 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTP---EYT 55
M+ ++++L+ + P+ W R+ E F D+ P +
Sbjct: 1 MSLPREEVLKAFHNQEVEHVPVSFW------RHFAE--------NEFGDVYQDPTIRDAN 46
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDL 115
+E Q ++ +FD + D G +P ++ L P +
Sbjct: 47 IEGHKQYVKDLDFDFSKTMLDGYFPYPFRGVE-----------NPRDLDDLANLVPLEED 95
Query: 116 FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV----FAY 171
+ +++ + ++ + +P + + + + V
Sbjct: 96 DPWIQDQV--ALAKEQNQIVGDLPTFITVFSPLILLKWAQIDHTKESILTSDVKFADLYE 153
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH----EFENYAARSVG 227
+N +L ++ + + A + G +V I+ + EF +
Sbjct: 154 KNPERVEQVLQVIAVDQGKVVRA-LKKGTEVDGIYYSTQSIQDPREDNLEFFKKVMEPID 212
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKE 282
I+ + + + AG + T+ ++W+ VPL +L +
Sbjct: 213 LIVQEEINRNFDLNILHVCGFAGA-YNHLEWFTNYPLQVINWATLTDGVPLGEGKKLFGD 271
Query: 283 GPVQGNLDPM---RLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLV 338
PV G D L G + + V ++D G I + ++ ++
Sbjct: 272 RPVLGGFDNSIKGLLYTGTKEEIQQNVRNLIDEAGKKGVILGADCTVPRDTPYDHLQWVI 331
Query: 339 KTVRSE 344
+ R
Sbjct: 332 EAARDY 337
>gi|89894524|ref|YP_518011.1| hypothetical protein DSY1778 [Desulfitobacterium hafniense Y51]
gi|89333972|dbj|BAE83567.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 409
Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/231 (17%), Positives = 86/231 (37%), Gaps = 18/231 (7%)
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
Q+++ K + + G AP+ G ++ + L+ L
Sbjct: 186 QAVAHWAKDYGMPLGVSGMVKAPFDTL-----GDTLRGLKGIMKDLRKRPEKILSALEVL 240
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDT-HAGC---LGEHEFENYAARSVGRIISAVRRKYPNA 240
+ Y +A G ++ +F H G L HE++ + + ++I + +
Sbjct: 241 VPHNIYYGLATSE-GERLLPVFLPLHRGSYPFLNPHEWDTFYWPPLKKVIEGLWAQ--GK 297
Query: 241 KFISFAKGAGY-MLKNYRRLTDSNAI-GLDWSVPLSFALELQKEGPVQGNLDPMRL-VVG 297
+ + +A+G L+ L ++ + +D + L + + GN+ +
Sbjct: 298 RTMFYAEGNWNPYLERISELPAASIVFHVDQTDIAKAKGVLGHKFCISGNVPNSLMAYGS 357
Query: 298 NQVMIDGVNAIL-DVLGSGPFIFNLGHGITP-QVDPKNVLDLVKTVRSEKI 346
+ D V +L D G FI + GI V +NV+ L++T R +
Sbjct: 358 PAQVSDYVKGLLHDYAADGGFIMDTA-GIMQTDVKVENVIALIETTRQYGV 407
>gi|319945664|ref|ZP_08019916.1| hypothetical protein HMPREF9421_0097 [Streptococcus australis ATCC
700641]
gi|319748263|gb|EFW00505.1| hypothetical protein HMPREF9421_0097 [Streptococcus australis ATCC
700641]
Length = 333
Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 51/366 (13%), Positives = 113/366 (30%), Gaps = 60/366 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+ +++ +L+ +G ++ P+ W + R++ +L PE E
Sbjct: 1 MSTKRELVLKAFRGEAVDRVPVGFW-----------HHFTREE--EWLKGFSNPEII-EK 46
Query: 59 TLQPIRRYNFDAAILFSDILV------IADALGRNVRFVENEGPRMDPITTQEIYLLNPN 112
L + + F ++ A+ + + ++ + P
Sbjct: 47 NLNGHKNFLHKVKPDFVKLMSDGYFAYPNPAIYKGLE------------NISDLAGIEP- 93
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ ++ + + +R I I AP T +++ D F Q
Sbjct: 94 LGADHPWITEQVELVKKIRAGFEEDIVAIYNIFAPVTYFKWLVGEVSGGDDLIA-NFIDQ 152
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSV 226
++ +LD + A I AG D I + + + ++ A S
Sbjct: 153 DAATLKKVLDTIGQDIASLSQRIIKEAGADGIYL---SVQSIQDARVSQEVYKQVIAPSE 209
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQK 281
++ + + + G + TD A ++W+V L+ E+
Sbjct: 210 LHVLETAK-EAGGVNILHIC-GYEGARNDIHLFTDYPAPVINWAVGPEGISLAEGREIFG 267
Query: 282 EGPVQGNLDP---MRLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
V G + L G + I+ G+ + I +D +
Sbjct: 268 GRTVLGGFENGKTGLLYTGDKAAIQAETKRIIAETGTTGLVIGADCTIPSDIDEER---- 323
Query: 338 VKTVRS 343
++ VR
Sbjct: 324 IEWVRE 329
>gi|332798312|ref|YP_004459811.1| hypothetical protein TepRe1_0301 [Tepidanaerobacter sp. Re1]
gi|332696047|gb|AEE90504.1| hypothetical protein TepRe1_0301 [Tepidanaerobacter sp. Re1]
Length = 409
Score = 56.4 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 13/221 (5%)
Query: 130 LRKKLPNHITLIGFCGAP--WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV 187
KL +G+ P W A I G F++ G + ++ + L +
Sbjct: 189 TMGKLAEISAKLGYPDFPMGWGYAPLDIIGDFLRGVGTVVLDIHRYPDKVKKATEALLEP 248
Query: 188 SAEYLIAQIHAGVDVIQIFDTHA-GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA 246
Y + G F H L + + ++ II +R K I F
Sbjct: 249 VTNYALTSKQMGAKYAM-FPLHLNEYLSPKLYNEFYWPTLKSII--LRLYEEGIKSIVFF 305
Query: 247 KGAGY-MLKNYRRLTDSNAIGLDWSVPLSFALELQKE-GPVQGNLDPMRLV--VGNQVMI 302
+G L+ L + + A E+ K+ V G + P+ L+ + +
Sbjct: 306 EGHHEQHLETILELPRGWGVAYFEKTDVIKAKEVLKDHTCVMGGI-PISLIVSGNPEQID 364
Query: 303 DGVNAILDVLG-SGPFIFNLGHGITP-QVDPKNVLDLVKTV 341
+ + +L+ + G FI G G P + P+N+ +++ V
Sbjct: 365 EYIKNLLEQVKPGGGFILAPGVGAAPAETPPENITAVIEAV 405
>gi|332798300|ref|YP_004459799.1| hypothetical protein TepRe1_0289 [Tepidanaerobacter sp. Re1]
gi|332696035|gb|AEE90492.1| hypothetical protein TepRe1_0289 [Tepidanaerobacter sp. Re1]
Length = 409
Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/225 (15%), Positives = 79/225 (35%), Gaps = 11/225 (4%)
Query: 125 QSISILRKKLPNHITLIGFCGAPWTV--ASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
+ ++ + + + +G P T+ A + G ++D + ++ +
Sbjct: 182 EKMAAFMQGVNEDMIKLGIPPIPTTLGMAPLDLIGDGLRDVTNVVLDIHRCPEKVKKACE 241
Query: 183 FLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF 242
L + + +A GV + I L + + + +I+ ++ K
Sbjct: 242 ALIEPILKVGLALKPFGVKIAFIPLHLNEYLSPKLYNEFYWPYLKEVINGFAKE--GIKS 299
Query: 243 ISFAKGAG-YMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGNLDPMRLV--VGN 298
+ F +G L+ L I + A ++ Q V G + P+ L+
Sbjct: 300 MVFFEGRHDAHLETILELPAGWGIAYFEKTDVRKAKKVLQGHTCVMGGV-PISLIISGTP 358
Query: 299 QVMIDGVNAILDVLG-SGPFIFNLGHGITP-QVDPKNVLDLVKTV 341
+ + V +L+ + G +I G P + +N+ L+ V
Sbjct: 359 EKIDAYVKNLLEEVKPGGGYILTTSVGTAPRETPIENMHALINAV 403
>gi|294496130|ref|YP_003542623.1| methyltransferase cognate corrinoid protein [Methanohalophilus
mahii DSM 5219]
gi|292667129|gb|ADE36978.1| methyltransferase cognate corrinoid protein [Methanohalophilus
mahii DSM 5219]
Length = 634
Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/364 (11%), Positives = 108/364 (29%), Gaps = 41/364 (11%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKF-KNFLDMCYTPEYTVELTLQPIR 64
+ L + ++ P++ + G +RK + + P E +
Sbjct: 275 DRTLAAMADKKVDRLPVYPL-ACG-------ALRKFADATYKEYAIDPNKFAESAFLGCK 326
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIF 124
+ D + D+ + G +++ E + P + + P + +
Sbjct: 327 YMDLDMFVGLIDLSATSADFGCTIKYPEEDTPSSEGHLEDYEDIETPEVKEG-TRAYELI 385
Query: 125 QSISILRKKLPNH--ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLD 182
++ + + KL +GF P + ++ + + N L
Sbjct: 386 EASKLAKDKLNKELGTPFVGFHEGPLLTLTQLMGADRVLMDMKT------NPDVVLEALQ 439
Query: 183 FLSDVSAEYLIAQIHAGV-DVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYPN 239
+D + A D + + + + + E ++ + + V V +KY
Sbjct: 440 KCTDYVCQVSEAFFEEDACDALCVDNLWSNNIIMDEEDYWKFDGKFVYDQHIPVFKKYDQ 499
Query: 240 AKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--------QKEGPVQGNLDP 291
I A + ++ + + + + G ++P
Sbjct: 500 PYIIHNCADAVHFDTQIKKFGTALFSYAYYESEREKGSQNYADLIPKYGDMCCMMGEINP 559
Query: 292 MRLVV-----------GNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVK 339
+ ++ +V++ GV+ L G ++ + G P + +V
Sbjct: 560 IDMMDNSPEGIQKIENDTEVLLKGVHESLKENGMQSKYVMSTGCETPPGGPMTPIKAMVD 619
Query: 340 TVRS 343
V+
Sbjct: 620 KVKE 623
>gi|219668667|ref|YP_002459102.1| uroporphyrinogen-III decarboxylase [Desulfitobacterium hafniense
DCB-2]
gi|219538927|gb|ACL20666.1| Uroporphyrinogen-III decarboxylase-like protein [Desulfitobacterium
hafniense DCB-2]
Length = 376
Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 19/138 (13%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI------- 265
+ ++ + + +++K P AK + + GA Y L + +
Sbjct: 232 ISPELYKEMLQPYHKELFAFIKKKAPQAKIMFHSCGAVYPLIPLLIEAGIDVLNPIQHTA 291
Query: 266 -GLDWSVPLSFALELQKEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLG-SGPFI---F 319
G+D PL E E G +D L + V ++D LG +G +I
Sbjct: 292 NGMD---PLKIKQEFGSEVIFHGGIDVQHALAGSIEGAEKEVKNMIDTLGENGGYIVAPA 348
Query: 320 NLGHGITPQVDPKNVLDL 337
N+ ++ + P+N+ L
Sbjct: 349 NV---VSGETPPENIASL 363
>gi|89894256|ref|YP_517743.1| hypothetical protein DSY1510 [Desulfitobacterium hafniense Y51]
gi|89333704|dbj|BAE83299.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 376
Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 19/138 (13%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI------- 265
+ ++ + + +++K P AK + + GA Y L + +
Sbjct: 232 ISPELYKEMLQPYHKELFAFIKKKAPQAKIMFHSCGAVYPLIPLLIEAGIDVLNPIQHTA 291
Query: 266 -GLDWSVPLSFALELQKEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLG-SGPFI---F 319
G+D PL E E G +D L + V ++D LG +G +I
Sbjct: 292 NGMD---PLKIKQEFGSEVIFHGGIDVQHALAGSIEGAEKEVKNMIDTLGENGGYIVAPA 348
Query: 320 NLGHGITPQVDPKNVLDL 337
N+ ++ + P+N+ L
Sbjct: 349 NV---VSGETPPENIASL 363
>gi|116617286|ref|YP_817657.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096133|gb|ABJ61284.1| Uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 343
Score = 56.0 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/322 (14%), Positives = 108/322 (33%), Gaps = 39/322 (12%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE 105
LD PE E + ++ + F ++ + + + +
Sbjct: 32 LDAFKNPEII-EGNILGTKKLVETTSPDFVKLMSDG-LFHYEFNYQDAD-------DKRV 82
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+Y I +L+ + ++ + + +P T+ + + + +
Sbjct: 83 VYANLSPIADNHPWLIKTADLVRRQKQVIGERASFY-NVFSPTTLLKWALVKNPDGHYDK 141
Query: 166 NRV------FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI----QIF-DTHAGCLG 214
++ +S L+ ++ + + A ++AG D I Q+ DT LG
Sbjct: 142 SKADEKLADIILTDSENVRQALEVITLDVIKQVKAAVNAGADGIYYSTQVIQDT---RLG 198
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP-- 272
+F+ + A + +++ A + + + G G + A ++WSV
Sbjct: 199 HADFDEFVAATDKQVLKA-ANQLSDTNILHIC-GNGGARNAISWFENYPASIVNWSVDTE 256
Query: 273 ---LSFALELQKEGPVQG---NLDPMRLVVGNQ-VMIDGVNAILDVLGSGPFI--FNLGH 323
L E+ V G N L G Q + ++ G+ I N
Sbjct: 257 DISLHEGKEIFPGKIVLGGFGNTAKDVLYRGTQSEIQQFAKRLVQEAGADNLIIGAN--C 314
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
+ +DP+++ ++ V+ E
Sbjct: 315 TVPRDIDPQHLQWAIEAVQKES 336
>gi|269839289|ref|YP_003323981.1| uroporphyrinogen decarboxylase [Thermobaculum terrenum ATCC
BAA-798]
gi|269791019|gb|ACZ43159.1| Uroporphyrinogen decarboxylase (URO-D) [Thermobaculum terrenum ATCC
BAA-798]
Length = 330
Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 51/361 (14%), Positives = 107/361 (29%), Gaps = 57/361 (15%)
Query: 1 MNERK-QKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVE 57
M + K ++ L+G + P+ W+ +F ++ + V
Sbjct: 1 MAQSKWDRVSAALEGGRPDKVPLTFWM-------------------HFPEVDRSARGLVR 41
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNV-RFVENEGP------RMDPITTQEIYLLN 110
TL RRY+ D + + G + + G + +
Sbjct: 42 ATLDLYRRYDLDLIKVMFRSSFGLEDWGVHFGSYHPTRGSWQTEEYVVHTPEDWGTIEVL 101
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
P L L + +S LRK++ + ++ +P +A + +H +
Sbjct: 102 PPDRGVLGEQLEV---LSQLRKEVGPDVPVLATLFSPSMLAVRLSGRARFLEHWRTHR-- 156
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI--QIFDTHAGCLGEHEF----ENYAAR 224
L + + + +A + AG D I I + E+ E Y
Sbjct: 157 ----DDVERALKVIGETVMAFGLACLRAGADGIFYAIELGSGRAMPHEEYSAIGERYDRP 212
Query: 225 SVGRIISA-----VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+ I + + F +++ Y R + A +
Sbjct: 213 ILAEIHERSRLTMLHLHGEDLAFSELVNYPSHVVNWYDRCAGPSLRDARAVTSKCLAAGI 272
Query: 280 QKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
E + ++ + + V A + + I G GI V +++ LV+
Sbjct: 273 DHERTL--------MLDTPEEIASEVRAAVAEVDGRGLILAPGCGIPITVPERSLRALVE 324
Query: 340 T 340
Sbjct: 325 A 325
>gi|332982839|ref|YP_004464280.1| hypothetical protein Mahau_2290 [Mahella australiensis 50-1 BON]
gi|332700517|gb|AEE97458.1| hypothetical protein Mahau_2290 [Mahella australiensis 50-1 BON]
Length = 333
Score = 56.0 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 60/194 (30%), Gaps = 21/194 (10%)
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD---------THAGCL 213
+ ++ ++D EYL + AG I I + + +
Sbjct: 139 QENALCYLKSQPDVAKAIIRRITDFFVEYLKKVLEAGRGKIDIIENCNDFGTQRSM--FI 196
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG-----LD 268
+F + + R+ + +Y ++ ++ + ++ + D
Sbjct: 197 SPDDFREFFKPQLKRLYDTAK-EYGVMYMQHSCGAIAPIIPDFIEM-GADILNPIQVMAD 254
Query: 269 WSVPLSFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGS-GPFIFNLGHGI 325
A E + + G +D L+ + + + + G +I + G+
Sbjct: 255 GMDIERLAKEYKGKITFYGGIDTQHLLPEGPEERIREEARKTVGYFDKEGGYILSGSQGL 314
Query: 326 TPQVDPKNVLDLVK 339
+ + + +++
Sbjct: 315 LDDIPYSHAVAMLE 328
>gi|154280404|ref|XP_001541015.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412958|gb|EDN08345.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 552
Score = 56.0 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 4 RKQKILEVLQGNVINPPPIWLMRQA 28
+ +L +G + PPIW+MRQA
Sbjct: 515 KNDLLLRAARGEKVERPPIWVMRQA 539
>gi|306833705|ref|ZP_07466832.1| conserved hypothetical protein [Streptococcus bovis ATCC 700338]
gi|304424475|gb|EFM27614.1| conserved hypothetical protein [Streptococcus bovis ATCC 700338]
Length = 349
Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 105/341 (30%), Gaps = 60/341 (17%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +++ +L+ + ++ P+ W + ++ F PE
Sbjct: 17 MTTKREWVLKAFKNEKVDKVPVGFWY---------HFTTDDERGDGF-----NPE-IFNK 61
Query: 59 TLQPIRRYNFDAAILFSDILV------IADALGRNV-RFVENEGPRMDPITTQEIYLLNP 111
+ +++ D F ++ + + + V E EG
Sbjct: 62 NIAGHKKFVLDVNPDFVKVMSDGFFTYPNEQIHQGVTSIKELEGIV-------------- 107
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+I ++ + +R+ P I AP T + ++G F
Sbjct: 108 SIGENHPWITQQVELAKKIREDFPEDIASFYNIFAPVTYLKWQLAGKGGNGDEIIENFIK 167
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAAR- 224
+++ +LD ++ I AGVD I + L + E+
Sbjct: 168 EDAELTKEVLDVVAGDIGILTKRLIKEAGVDGIYL---SVQNLQDSRSSKEEYNQVIKPG 224
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALEL 279
+ + A+ N I +GA + TD A ++W+ V LS +L
Sbjct: 225 ELHILNRAISAGGTNILHICGYEGAT---NDIMYYTDYPADVINWAVELEGVSLSEGRQL 281
Query: 280 QKEGPVQG---NLDPMRLV-VGNQVMIDGVNAILDVLGSGP 316
V G N + L + + V +LD G
Sbjct: 282 FGGKTVLGGFENTEKGLLYLGSKEAIQGKVKELLDEAGRQG 322
>gi|255527434|ref|ZP_05394307.1| Uroporphyrinogen-III decarboxylase-like protein [Clostridium
carboxidivorans P7]
gi|296187463|ref|ZP_06855858.1| hypothetical protein CLCAR_2955 [Clostridium carboxidivorans P7]
gi|255508880|gb|EET85247.1| Uroporphyrinogen-III decarboxylase-like protein [Clostridium
carboxidivorans P7]
gi|296047985|gb|EFG87424.1| hypothetical protein CLCAR_2955 [Clostridium carboxidivorans P7]
Length = 370
Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 78/247 (31%), Gaps = 29/247 (11%)
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCG-AP---WTVASYMISGGFIKD 162
L NID L Q+ +R GF +P TV Y+ G +
Sbjct: 136 DRLGVNIDEIAADLAYAPQAQQNVRDA--------GFVLYSPAVAITVNEYLSGGRSMTK 187
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA----GCLGEHEF 218
++ ++ +LD + + + + +I + F + A +
Sbjct: 188 FMRD---LFRIPDKVEAVLDVIQESMIQGIKKKIKESKPDV-FFLSPARGASEFYSPKLW 243
Query: 219 ENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSVPLSFA 276
E + + + A+ + G NY + D +
Sbjct: 244 ERFVWKYIKGAADAIIEE--GVVCGIHIDGNWERDLNYFKDFPKGKIVFETDGMTDIYKI 301
Query: 277 LE-LQKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKN 333
E L ++G++ P ++ + + ++ +G G FI + G I P +N
Sbjct: 302 KEELGGHVCIKGDV-PAAKLVLSTPDEIYNYSTKLIKDMGQG-FILSSGCSIPPNAKVEN 359
Query: 334 VLDLVKT 340
V +V
Sbjct: 360 VKAMVSA 366
>gi|332981785|ref|YP_004463226.1| hypothetical protein Mahau_1208 [Mahella australiensis 50-1 BON]
gi|332699463|gb|AEE96404.1| hypothetical protein Mahau_1208 [Mahella australiensis 50-1 BON]
Length = 379
Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 18/183 (9%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF---D---THAGCLGEHEFENYAAR 224
Y + +++F++D + E + I DV +F D + L ++ +
Sbjct: 193 YDQPALMHEMMEFIADFTIE-VSHPILEKTDVDYVFINEDMSMKNGPLLSPDTYKTFIFP 251
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-------PLSFAL 277
+ R++ + + G L +AI W + P+
Sbjct: 252 RMCRLVDYFKS-HGVRYVCVDTDGNCEALIPLLMEAGVDAI---WPMERAADMDPIKLRK 307
Query: 278 ELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDL 337
+ K+ + G +D L + + + ++ ++ G FI + H + P + +N
Sbjct: 308 KFGKDLRLWGGVDKRELAKTKENIDKHLASLYPLIEEGGFIPTVDHTVPPDISLENFRYY 367
Query: 338 VKT 340
+K
Sbjct: 368 MKR 370
>gi|332981347|ref|YP_004462788.1| putative methyltransferase CmuC [Mahella australiensis 50-1 BON]
gi|332699025|gb|AEE95966.1| putative methyltransferase CmuC [Mahella australiensis 50-1 BON]
Length = 406
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/412 (15%), Positives = 122/412 (29%), Gaps = 76/412 (18%)
Query: 1 MNERKQKILEVLQGNVINPPPIWL--MRQAGRYLPEYRQIRK---------KFKNFLDMC 49
M +++++E L + PI MR G Y ++++ K + M
Sbjct: 1 MLTSRERVIETLNHREPDMVPIDFGGMRSTGISAMAYNKLKEYLGVHGGQTKVYDIFQML 60
Query: 50 YTPEYTVELTLQP----IRRYNF---------------DAAILFSD-----------ILV 79
PE V + + RY D + L
Sbjct: 61 AEPELEVLNIMGGDVIQLHRYEPAWGIDISSWKPWILPDGSPCVVPAEFDPVQDEEGNLS 120
Query: 80 IADALGRNVRFVENEGPRMDPI-------TTQEIYLLNPNIDLFLNYLLPIFQSISILRK 132
I R E G D + T + P ++ L + ++ + +
Sbjct: 121 IVRDGQVIARMPEG-GFYFDQVYHPYAEVETYDDIDSIPINEISDIELEFLKENARRMYE 179
Query: 133 KLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYL 192
+ ++G G + + +G + + ++ L+ L+ L
Sbjct: 180 Q--TDYAILGSFGG-----NILEAGQQDWGFEKFYMAMALQPDLVHYYLERLTQSYMRDL 232
Query: 193 IAQIHA-G--VDVIQIFD----THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISF 245
+ A G + VIQ D A + + R+ V+ YP K F
Sbjct: 233 EKYLEAVGRYLTVIQFGDDLGTQEAPQISPKMYREVIKPYHSRMYQYVQNHYPEIKV--F 290
Query: 246 AKGAGYMLKNYRRLTDSNA-------IGLDWSVPLSFALELQKEGPVQG---NLDPMRLV 295
G + L D+ I P+ E + G N+
Sbjct: 291 LHSCGAIYDLIPDLIDAGVQIINPVQISAKGMDPVLLKKEFGNDLTFWGGGANMQYTVPN 350
Query: 296 VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
+ + V ++ V G ++F H I V P+ ++ + T ++ ++
Sbjct: 351 GTIEQIKREVEKLVHVFAPGGGYVFTQVHNIQANVPPEKIMAIYDTAKAHRV 402
>gi|310825923|ref|YP_003958280.1| hypothetical protein ELI_0298 [Eubacterium limosum KIST612]
gi|308737657|gb|ADO35317.1| hypothetical protein ELI_0298 [Eubacterium limosum KIST612]
Length = 390
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/297 (13%), Positives = 87/297 (29%), Gaps = 54/297 (18%)
Query: 69 DAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSIS 128
D A F D L+ + P ++ + L D F Y+ ++
Sbjct: 120 DPAAYFRDYLLP------------RKYPVLNETGEKAYEALCEAFDKFGWYMKKTIEA-- 165
Query: 129 ILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+R + + ++ + S M F +D ++ ++ +D
Sbjct: 166 NMRIE-ADGYPVLSNGAINHPLDSIM---DFCRDFSGVMTDIRRHPDELKHAMESFNDFL 221
Query: 189 AEYLI---------AQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPN 239
A I F L +FE + +
Sbjct: 222 IHNSCDGYRKREDSAHFLFCATHIAPF------LKPKDFEEFYFPYFRAQLDYAMNTC-G 274
Query: 240 AKFISFAKGAGY-MLKNYRRLTDSNAIGL---DWSVPLSFALELQKEGPVQGNLDPMRLV 295
F +G + + L D++ + + F +L + V G + P+ L+
Sbjct: 275 YTVGVFMEGNWEPYYELLQELPDNDGKLVCLQENGDCKKFKEKLGNKLCVCGGV-PISLL 333
Query: 296 V--GNQVMIDGVNAILDVLGSGPF--------IFNLGHGITPQVDPKNVLDLVKTVR 342
+ + D V ++D + I LG P+N+ +++ V+
Sbjct: 334 AFGSEEEVKDCVKRMIDDCAADGGFMISTDKGILTLG-----DAKPENIKAMIEAVK 385
>gi|319945666|ref|ZP_08019918.1| hypothetical protein HMPREF9421_0099 [Streptococcus australis ATCC
700641]
gi|319748265|gb|EFW00507.1| hypothetical protein HMPREF9421_0099 [Streptococcus australis ATCC
700641]
Length = 359
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 55/344 (15%), Positives = 113/344 (32%), Gaps = 56/344 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WL--MRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M+ +K+ +L ++G + P+ WL + Q E +++ L E ++
Sbjct: 27 MS-KKELVLRAIRGEAVERIPVGFWLHYVTQ------EEKELGLDNPAVL------EKSI 73
Query: 57 ELTLQPIRRYNFDAAILFSD--ILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNID 114
+ + + D + SD + R + + QE+ + P I
Sbjct: 74 KGHQHYVEEISPDFVKIMSDGFFRYPSALYSREI------------TSIQELKDIQP-IG 120
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
++ + + +R I +P + + F ++
Sbjct: 121 EHHPWIEKQIEVVKEIRSHFHEEIASFYNIFSPISYLKRWFRTDHSRGDQVIADFIKEDP 180
Query: 175 RAFNWLLDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGR 228
+LD +++ A I AGV+ I QI D + + E+ S
Sbjct: 181 ETLAHVLDVIAEDIAILSRRLIQEAGVEGIYFSTQQIQD---ERVTDEEYRKIIEPSSIA 237
Query: 229 IISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKE 282
++ A N I +GA ++ ++ A ++W+ + L+ +L
Sbjct: 238 VLEAANEAGGINILHICGFEGASNEVELFKDYP---AQVINWATHHEGISLAEGRKLFGN 294
Query: 283 GPVQG---NLDPMRLVVGNQV-MIDGVNAILDVLGSGPFIFNLG 322
V G N L G + + ++ GS I LG
Sbjct: 295 RAVLGGFVNGKKGLLYQGERATIEQETRRLVAEAGSRGLI--LG 336
>gi|228477632|ref|ZP_04062261.1| uroporphyrinogen-III decarboxylase [Streptococcus salivarius SK126]
gi|228250521|gb|EEK09732.1| uroporphyrinogen-III decarboxylase [Streptococcus salivarius SK126]
Length = 332
Score = 55.2 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/334 (14%), Positives = 105/334 (31%), Gaps = 43/334 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
M+E+++ +L+ +G ++ P+ + + F PE +
Sbjct: 1 MSEKRELVLKAFRGESVDRVPVGF-------WHHFTTEDEWLHGF----ENPEII-DKNK 48
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
+++ + F ++ F P + + ++
Sbjct: 49 AGHKKFIEEVKPDFVKLMSD--------GFFAYPQPAFKDFKSISDLQTIEPLGANHPWI 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ ++ L P I I P T +++ D + +N A +
Sbjct: 101 SAQVELVNSLIADFPEDIVAIYNIFGPVTYFKWLVGKVSGGDDAIAD-YIEENREALKHV 159
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAARSVGRIISAVR 234
LD + + A I AG D I + + ++ A S +++ A
Sbjct: 160 LDVIGEDIASLSQRVIKEAGADGIYL---SVQSIQDNRVSAEIYKEIIAPSELKVLDAAN 216
Query: 235 R-KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQGN 288
K N I +GA ++ ++ A ++W+V L+ + V G
Sbjct: 217 EAKGHNILHICGYEGARNNIELFKDYP---AQVVNWAVGPEEISLAKGRNIFGGRTVLGG 273
Query: 289 LDP---MRLVVGNQ-VMIDGVNAILDVLGSGPFI 318
+ L G + + + V I+ G+ I
Sbjct: 274 FENGKDGLLYTGTKTAIQEKVREIITDTGTLGLI 307
>gi|11497628|ref|NP_068848.1| hypothetical protein AF0007 [Archaeoglobus fulgidus DSM 4304]
gi|2650650|gb|AAB91225.1| predicted coding region AF_0007 [Archaeoglobus fulgidus DSM 4304]
Length = 417
Score = 55.2 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 64/421 (15%), Positives = 138/421 (32%), Gaps = 90/421 (21%)
Query: 1 MNERKQKILEVLQGNVINPPPI------WLMRQAGRYLPE----YRQIRKKFKNFLDMCY 50
M ER+Q+I +V++G + P+ W AG E Y + + +L +
Sbjct: 7 MEERRQRIEDVVKGKEPDRVPVTGATTVWHGSYAGYTAKEVLFDYEKCKDA---WLKVAK 63
Query: 51 TPEYTVELTLQPIR--------RYNFDAAILFSDILVIADALGRNV-------RFVENEG 95
++ + + D + IL + ++V EN
Sbjct: 64 DFDFDSFTVVGGLEGMIYTVALLEQPDMSAAARFILGPTHLVLQDVYTRWPGYELEENAH 123
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPN------------------- 136
P+ ++ + I+ L ++ + ++ + +KL N
Sbjct: 124 PQFIGKEIMKVEEYDQLIENPLEFINKV--AMPRINRKLANVGSAEYNAALAKYGAELAR 181
Query: 137 ----------HITLIGFCGAP--WTVASYMISGGFIKDHGQNRVFAYQNS-------RAF 177
+ +G+ P W A + F++D + Y+ A
Sbjct: 182 FGAFMADVSMELAKLGYPTIPMSWAYAPLDLISDFLRDIKNMVMDLYRYPDKVKEAVEAV 241
Query: 178 NWLLDFLSDVSA--EYLIAQIHAGVDVIQIF------DTHAGCLGEHEFENYAARSVGRI 229
L+ ++VSA + + Q+ G DV++ F + L + + + +
Sbjct: 242 KPLIIKAAEVSAPPKEIRKQV-FGTDVVECFYPLHLNE----YLSPKLYNEFYWPYLNEV 296
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGP--VQG 287
+ V F+ F L+ +G+ E+ + V G
Sbjct: 297 LHKV-ADMGQVNFVLFEGRHDAHLETLLEAPKKKVVGVFEKTDPRKVREVLGDHVILVSG 355
Query: 288 NLDPMRLV--VGNQVMIDGVNAILDVLGSGPF-IF-NLGHGITPQVDPKNVLDLVKTVRS 343
P L+ Q + + + ++L+ G I+ + GI+ P+NV +++ V+
Sbjct: 356 --PPNSLLIGGTPQKVEEYMKSLLEDCKEGGMMIWPGVDGGISRDARPENVKAVIEAVKK 413
Query: 344 E 344
Sbjct: 414 Y 414
>gi|323486558|ref|ZP_08091880.1| hypothetical protein HMPREF9474_03631 [Clostridium symbiosum
WAL-14163]
gi|323400151|gb|EGA92527.1| hypothetical protein HMPREF9474_03631 [Clostridium symbiosum
WAL-14163]
Length = 351
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/329 (13%), Positives = 97/329 (29%), Gaps = 42/329 (12%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF---LDMCYTPEYTVELT 59
+ ++ L VL ++ P+ + + + +F ++ E +E
Sbjct: 2 TKHERFLNVLANKPVDRVPVAF----------FHHFLEDWTDFGKGIEDDEVFEKNIEGH 51
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+ ++ D A + +D L + V + T + +
Sbjct: 52 RIARKLFDPDVAKVMNDSL-----MLMPVE--------ASFVKTAADLRKIEPLSSGSGF 98
Query: 120 LLPIFQSISILRKKLPN-HITLIGFCGAP-WTVASYMISGGFI---KDHGQNRVFAYQNS 174
+ + +R+ + + +P + S + G + F ++
Sbjct: 99 VKRTLELTKRVREIYADSDAPVYATSFSPTLVLRSALPEGRRPGLGGPETVIKRFIKEDP 158
Query: 175 RAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQI-FDTHAGCLGEHEFENYAARSVGRIISA 232
A +S+ E I GVD I + + AG E + Y + ++
Sbjct: 159 EALGEACKIVSEGIMELNRLLIKECGVDGIYLSVNNQAGFFPEEIYRTYISPFEKAVLDD 218
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEGPVQG 287
K + + G + T NA +W V LS L V G
Sbjct: 219 -ANKLSDVNILHICGFIGQG-NDLNLFTGFNAAAYNWDVHTEKVSLSQGKRLFGGKAVFG 276
Query: 288 NLDPMRLVVGN--QVMIDGVNAILDVLGS 314
+ ++ + + ILD G
Sbjct: 277 GFEQKGVLYKGTREEVEKYTYQILDEAGQ 305
>gi|170761091|ref|YP_001786916.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum A3 str. Loch Maree]
gi|169408080|gb|ACA56491.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 290
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 19/218 (8%)
Query: 45 FLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GPRMD--P 100
F D+ + L+ IR YN D +I+ + V A+ALG + + + GPR+
Sbjct: 29 FPDVHKNAKDMAVLSK-SIREYNEDLFSIVPFCMTVEAEALGGEINLGDEKAGPRVSNYT 87
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ E ID + + +S+ IL+K+ T+I P+T+ S +I
Sbjct: 88 FKSIEDIKGLKEIDFEAKRIKEVLKSVEILKKEGE---TVIMDVQGPFTIISSLI----- 139
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG---CLGEHE 217
D +N L+ + S E++ + GVD+I D+ AG LG
Sbjct: 140 -DPRIFYKAVRKNKDEVERLMKIVQKESVEFIKEGVKRGVDIISFGDS-AGTLDILGPKM 197
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
++ + ++ + ++ I L
Sbjct: 198 YKELGGKYTYNVLKEAKNYLGDS-IIHLCGITSSSLDR 234
>gi|153941512|ref|YP_001390840.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
gi|152937408|gb|ABS42906.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. Langeland]
gi|295318910|gb|ADF99287.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum F str. 230613]
Length = 290
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 87/224 (38%), Gaps = 20/224 (8%)
Query: 39 RKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GP 96
R K F D+ + L+ IR YN D +I+ + V A+ALG + + + GP
Sbjct: 24 RAGIK-FPDVHKNAKDMAVLSK-SIREYNEDFFSIVPFCMTVEAEALGGEINLGDEKAGP 81
Query: 97 RMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R+ + E ID + + +S+ IL+K+ T+I P+T+ S +
Sbjct: 82 RVSNYTFKSIEDIEGLKEIDFKTKRIGEVLKSVEILKKEGE---TVIMDVQGPFTIISSL 138
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
I D +N L+ + + S E++ + GVD+I D+ AG
Sbjct: 139 I------DPRIFYKAVRKNKDEVERLMKIVQEGSVEFIKEGVKRGVDIISFGDS-AGTLD 191
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
LG ++ + ++ + ++ I L
Sbjct: 192 ILGPKMYKELGGKYTYNVLKEAKNYLGDS-IIHLCGITSSSLDR 234
>gi|332983214|ref|YP_004464655.1| hypothetical protein Mahau_2697 [Mahella australiensis 50-1 BON]
gi|332700892|gb|AEE97833.1| hypothetical protein Mahau_2697 [Mahella australiensis 50-1 BON]
Length = 340
Score = 54.9 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 36/263 (13%)
Query: 99 DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
DP + +P+ + + + P ++G + ++
Sbjct: 96 DPSRIDDFDWPDPSRHIDPEECKRVVD-------RAPEGYPILGVIWS-----AHFQDAC 143
Query: 159 FIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA--G-VDVIQI---FDTHAG- 211
+ F +++ ++D E A G + + I F + G
Sbjct: 144 AAFGMSTALMKMKLEPEMFRAVINRIADFYLEANEIFYDATKGKLHAVLIGNDFGSQTGL 203
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI------ 265
L + ++I + K I + GA + +AI
Sbjct: 204 MLSPAAVREFVWPGTRKLIQQAKGY--GLKVIHHSCGAIADIIPDLIEMGVDAIHPIQAL 261
Query: 266 --GLDWSVPLSFALELQKEGPVQGNLD--PMRLVVGNQVMIDGVNAILDVLGSGPFIFNL 321
G+D P + + G +D + ++ + V + + I +
Sbjct: 262 AHGMD---PYRLKKDFGDKVAFCGGVDAQNLLVLGNPDEVRTKVLELKRIF-PTGLIISP 317
Query: 322 GHG-ITPQVDPKNVLDLVKTVRS 343
H I P VDP N+ L V++
Sbjct: 318 SHEAILPDVDPANIKALFDAVKA 340
>gi|257065296|ref|YP_003144968.1| hypothetical protein Shel_26160 [Slackia heliotrinireducens DSM
20476]
gi|256792949|gb|ACV23619.1| hypothetical protein Shel_26160 [Slackia heliotrinireducens DSM
20476]
Length = 296
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/218 (18%), Positives = 80/218 (36%), Gaps = 16/218 (7%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-GPRM-DPI 101
F D + L+L + +L V +A+G NV+ + + PR DP+
Sbjct: 31 EFPDAYCHRDTMATLSLAIKEHDGANFCLLPFCRTVEVEAMGGNVKLGDAKSCPRAADPV 90
Query: 102 -TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ E ++ P+ID + + ++ IL+++ + G PWT+ ++
Sbjct: 91 CESYEDFMALPDIDFSQGRIREVLEACRILKQR--GETVCLEIVG-PWTMMQSLM----- 142
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG---EHE 217
D + + ++ L+ Y+ GVDVI + D+ AG L
Sbjct: 143 -DAAKVFKMFRKQPDQAVEVMWKLAGQLLPYVDEARECGVDVITLSDS-AGTLSILGPRV 200
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
E + + A+ + + + Y L +
Sbjct: 201 MEKSMLLFMADFVRALDERIGGSMVLQLCPKIAYALID 238
>gi|325261144|ref|ZP_08127882.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324032598|gb|EGB93875.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 399
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/216 (16%), Positives = 70/216 (32%), Gaps = 50/216 (23%)
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF---DTHAGC----LGE 215
+ + V Y L+ L++ ++L + + A IF D +
Sbjct: 199 YEEFLVRIYTEPELVKSYLEQLTEAYLQFLDSYLEAVGPYTNIFQCNDDLGMQTSTLISP 258
Query: 216 HEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF 275
+ +I S +++K P + + + G+ Y L T +A+
Sbjct: 259 EVYREVFKPYHKKIYSYIKKKVPGSHILLHSCGSIYDLIPDLIETGVDALN--------- 309
Query: 276 ALELQKEGPVQGN---LDPMRL----------------------VVGNQVMIDGVNAILD 310
PVQ N +DP L + + D +++
Sbjct: 310 --------PVQINAEKMDPGTLKREFGRNITFWGGGCSTQTTLSFGTLEEIEDETKRMIE 361
Query: 311 VLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
G ++FN H I V P+ ++ L +T + +
Sbjct: 362 TFAPGGGYVFNQVHNIQSNVSPQRIIKLYETAKRYR 397
>gi|302336854|ref|YP_003802060.1| hypothetical protein Spirs_0310 [Spirochaeta smaragdinae DSM 11293]
gi|301634039|gb|ADK79466.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
Length = 380
Score = 54.5 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 12/150 (8%)
Query: 207 DTHAGCLGEHEFENYAARSVGRIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAI 265
D+ + + N ++ + ++ AK I + GA + + +
Sbjct: 232 DSM--LISPEMYRNLVLPRHKKLFAGIKTASRGRAKIIMHSDGAILPVIPDLIEAGIDCL 289
Query: 266 G-LDWSVPLSF----ALELQKEGPV-QGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGP 316
+ ++VP E K+ G +D ++ + + V +D+L G
Sbjct: 290 NPVQYTVPGIDPVLLKKEFGKDITFWGGGIDTQSILPNASPSQVKEEVRRQIDILAPGGG 349
Query: 317 FIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
FIF+ H I V P+N++ + + VR I
Sbjct: 350 FIFSQVHIIQKDVPPENIVAMFEAVRESGI 379
>gi|307354689|ref|YP_003895740.1| hypothetical protein Mpet_2558 [Methanoplanus petrolearius DSM
11571]
gi|307157922|gb|ADN37302.1| conserved hypothetical protein [Methanoplanus petrolearius DSM
11571]
Length = 418
Score = 54.5 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 35/259 (13%)
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP--WTVASYMISGGFIKDHGQNRV 168
P + + + + L + +GF P W+ + + G F++D +
Sbjct: 167 PESNAAFSKYGAQLATFGASQGDLIGSLAAMGFPTFPTAWSYSPLDVLGDFLRDIKNIVI 226
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLI--------AQIHAGVDVIQIF------DTHAGCLG 214
++ ++ L+ + E + G D+++ F + L
Sbjct: 227 DLFRYPEKVKQAVEALTPMLIESARITGTVPPEMKKALGTDIVECFFPLHLNE----YLN 282
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
+++ + ++ +++ +I F L+ L I +
Sbjct: 283 PKQYDEFYWPALKKVLEETIA-MGQTPYILFEGRHDAHLETLLELPKGKVIAVFDKTDPR 341
Query: 275 FALELQKEGPV--QGNLDPMRLV--VGNQVMIDGVNAILDVLGSG-----PFIFNLGHGI 325
++ + + G P L+ Q + D + ++L G P + GI
Sbjct: 342 KVRDVVGDHVILSSG--PPNSLLIGGTPQKVDDYMKSMLTDCKEGGMMIYPGV---DGGI 396
Query: 326 TPQVDPKNVLDLVKTVRSE 344
+ P+NV ++K V+
Sbjct: 397 SGDARPENVQAMIKAVQKY 415
>gi|266620747|ref|ZP_06113682.1| hypothetical protein CLOSTHATH_01854 [Clostridium hathewayi DSM
13479]
gi|288867606|gb|EFC99904.1| hypothetical protein CLOSTHATH_01854 [Clostridium hathewayi DSM
13479]
Length = 323
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/335 (13%), Positives = 100/335 (29%), Gaps = 52/335 (15%)
Query: 3 ERKQKILEVLQGNVINPPP-IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQ 61
+K+++L ++G P + M + PEY E V +
Sbjct: 2 TKKERVLHAIRGEETKEIPSCFSMH----FSPEY--------------ANGENAVRAHVD 43
Query: 62 PIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLL 121
++ + D + ++ LV D + T + Y I ++
Sbjct: 44 FYKQTDVDILKIMNENLVTCD----------------HELHTIQDYTEFQRITAEQPFMR 87
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYM----ISGGFIKDHGQNRVFAYQNSRAF 177
+ + + IG + T A Y G+ + + ++
Sbjct: 88 RQVDLVKRILDETGGECYTIGTLHSVGTSAMYHPFKPQGYGYDQSRKIFDAWLKEDPVKM 147
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRIISAV 233
+ ++D E + I AG+D + + + L +F N+ A I+ AV
Sbjct: 148 LEAMKRITDGLCELAVKYIEAGLDGVYVA-SLGAERRFGLTREQFLNWIAPFDQMIMRAV 206
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG---LDWSVPLSFALELQKEGPVQGNLD 290
+ + + + + L E+ + V G L
Sbjct: 207 KEAGGTCFLHVCNRDVNLDYYRDYDEKLYDVVNWGTFEVPCSLKEGREIFHQRTVMGGLA 266
Query: 291 PM---RLVVGNQVMIDGVNAILDVLGSGPFIFNLG 322
+ +++ + ++ + G FI LG
Sbjct: 267 NRQGVLAAGSEEALVNTIRSVTETYGRKGFI--LG 299
>gi|258645630|ref|ZP_05733099.1| uroporphyrinogen decarboxylase [Dialister invisus DSM 15470]
gi|260402991|gb|EEW96538.1| uroporphyrinogen decarboxylase [Dialister invisus DSM 15470]
Length = 336
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 54/362 (14%), Positives = 111/362 (30%), Gaps = 60/362 (16%)
Query: 3 ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
R+++I + G + P+ W+ +L E + P E +
Sbjct: 2 TREERIRAAIAGRETDRVPVAAWM------HLSE--------HD-----QDPISLAEAEV 42
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRF--VENEGPRMDP--ITTQEIYLLNPNIDLF 116
+ +Y+FD + L G V+ + P + I Y I
Sbjct: 43 ELTEKYDFDYIKMMPFGLYSTQDFGNQVKIYCDPYKEPIVQKFAIDGPAGYDSIRAISAL 102
Query: 117 LNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRA 176
+ L K+ +I +P++ + + D + R+
Sbjct: 103 QGTYGKQVEFARELAKRRIEGTPIIQTIFSPFSTLKKLAGDRLLTDMK-------EYPRS 155
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCLGEHEFENYAARSVGRIISAVR 234
+ L ++ + +++ I AGVD +A + E EF + +I++
Sbjct: 156 VHHALAAITATTLDFVGYNIDAGVDGFFFATQNAVKTMMTEEEFNEFGVFYDLAVINSYA 215
Query: 235 RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKE------- 282
+K + + +L D L+W L A L +
Sbjct: 216 KKTWFNPIHMHGEDV-----YFEKLKDYPVNCLNWHDRHTWPSLKEARRLTDKCLMAGIR 270
Query: 283 -------GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVL 335
G +Q D + L + + V + + I G + P+ +N++
Sbjct: 271 SAPYFVNGVLQ--YDDIILDGTPAEIAEHVKDAISQVDGKGLILAPGCVVNPKASAENLM 328
Query: 336 DL 337
L
Sbjct: 329 AL 330
>gi|226948829|ref|YP_002803920.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
gi|226841005|gb|ACO83671.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum A2 str. Kyoto]
Length = 290
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 20/224 (8%)
Query: 39 RKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GP 96
R K F D+ + L+ IR YN D +I+ + V A+ALG + + + GP
Sbjct: 24 RAGIK-FPDVHKNAKDMAVLSK-SIREYNEDFFSIVPFCMTVEAEALGGEINLGDEKAGP 81
Query: 97 RMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R+ + E ID + + +S+ IL+K+ T+I P+T+ S +
Sbjct: 82 RVSNYTFKSIEDIEGLKEIDFKTKRIGEVLKSVEILKKEGE---TVIMDVQGPFTIISSL 138
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
I D +N L+ + S E++ + GVD+I D+ AG
Sbjct: 139 I------DPRIFYKAVRKNKDEVERLMKIVQKGSVEFIKEGVKRGVDIISFGDS-AGTLD 191
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
LG ++ + ++ + ++ I L
Sbjct: 192 ILGPKMYKELGGKYTYNVLKEAKNYLGDS-IIHLCGITSSSLDR 234
>gi|170756259|ref|YP_001781130.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
botulinum B1 str. Okra]
gi|169121471|gb|ACA45307.1| uroporphyrinogen decarboxylase family protein [Clostridium
botulinum B1 str. Okra]
Length = 290
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 20/224 (8%)
Query: 39 RKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GP 96
R K F D+ + L+ IR YN D +I+ + V A+ALG + + + GP
Sbjct: 24 RAGIK-FPDVHKNAKDMAVLSK-SIREYNEDFFSIVPFCMTVEAEALGGEINLGDEKAGP 81
Query: 97 RMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R+ + E ID + + +S+ IL+K+ T+I P+T+ S +
Sbjct: 82 RVSNYTFKSIEDIEGLKEIDFKTKRIGEVLKSVEILKKEGE---TVIMDVQGPFTIISSL 138
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
I D +N L+ + S E++ + GVD+I D+ AG
Sbjct: 139 I------DPRIFYKAVRKNKDEVERLMKIVQKGSVEFIKEGVKRGVDIISFGDS-AGTLD 191
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
LG ++ + ++ + ++ I L
Sbjct: 192 ILGPKMYKELGGKYTYNVLKEAKNYLGDS-IIHLCGITSSSLDR 234
>gi|168180151|ref|ZP_02614815.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
gi|182668964|gb|EDT80940.1| putative methylcobalamin:Coenzyme M methyltransferase [Clostridium
botulinum NCTC 2916]
Length = 290
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/224 (21%), Positives = 86/224 (38%), Gaps = 20/224 (8%)
Query: 39 RKKFKNFLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GP 96
R K F D+ + L+ IR YN D +I+ + V A+ALG + + + GP
Sbjct: 24 RAGIK-FPDVHKNAKDMAVLSK-SIREYNEDFFSIVPFCMTVEAEALGGEINLGDEKAGP 81
Query: 97 RMD--PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R+ + E ID + + +S+ IL+K+ T+I P+T+ S +
Sbjct: 82 RVSNYTFKSIEDIEGLKEIDFKTKRIGEVLKSVEILKKEGE---TVIMDVQGPFTIISSL 138
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
I D +N L+ + S E++ + GVD+I D+ AG
Sbjct: 139 I------DPRIFYKAVRKNKDEVERLMKIVQKGSVEFIKEGVKRGVDIISFGDS-AGTLD 191
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKN 255
LG ++ + ++ + ++ I L
Sbjct: 192 ILGPKMYKELGGKYTYNVLKEAKNYLGDS-IIHLCGITSSSLDR 234
>gi|306831559|ref|ZP_07464717.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304426344|gb|EFM29458.1| conserved hypothetical protein [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 349
Score = 54.1 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 105/341 (30%), Gaps = 60/341 (17%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +++ +L+ + ++ P+ W + ++ F PE
Sbjct: 17 MTTKREWVLKAFKNEKVDKVPVGFWY---------HFTTDDERGDGF-----NPE-IFNK 61
Query: 59 TLQPIRRYNFDAAILFSDILV------IADALGRNV-RFVENEGPRMDPITTQEIYLLNP 111
+ +++ D F ++ + + + V E EG
Sbjct: 62 NIAGHKKFVSDVNPDFVKVMSDGFFTYPNEQIHQGVTSIKELEGIV-------------- 107
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+I ++ + +R+ P I AP T + ++G F
Sbjct: 108 SIGENHPWITQQVELAKEIREDFPEDIASFYNIFAPVTYLKWQLAGKGGNGDEIIENFIK 167
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAAR- 224
+++ +LD ++ I AGVD I + L + E+
Sbjct: 168 EDAELTKEVLDVVAGDIGILTKRLIKEAGVDGIYL---SVQNLQDLRSSKEEYNQVIKPG 224
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALEL 279
+ + A+ N I +GA + TD A ++W+ V LS +L
Sbjct: 225 ELHILNRAISAGGTNILHICGYEGAT---NDITYYTDYPADVINWAVELEGVSLSEGRQL 281
Query: 280 QKEGPVQG---NLDPMRLV-VGNQVMIDGVNAILDVLGSGP 316
V G N + L + + V +LD G
Sbjct: 282 FGGKTVLGGFENTEKGLLYLGSKEAIQGKVKELLDEAGRQG 322
>gi|237794831|ref|YP_002862383.1| methyltransferase family protein [Clostridium botulinum Ba4 str.
657]
gi|229261480|gb|ACQ52513.1| methyltransferase family protein [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 18/215 (8%)
Query: 45 FLDMCYTPEYTVELTLQPIRRYNFDA-AILFSDILVIADALGRNVRFVENE-GPRMD--P 100
F D+ + L+ IR YN D +I+ + V A+ALG + + + GPR+
Sbjct: 29 FPDVHKNAKDMAVLSK-SIREYNEDLFSIVPFCMTVEAEALGGEINLGDEKAGPRVSNYT 87
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ E ID + + +S+ IL+K+ T+I P+T+ S +I
Sbjct: 88 FKSIEDIKGLKEIDFEAKRIKEVLKSVEILKKEGE---TVIMDVQGPFTIISSLI----- 139
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG---CLGEHE 217
D +N L+ + S E++ + GVD+I D+ AG LG
Sbjct: 140 -DPRIFYKAVRKNKDEVERLMKIVQKGSVEFIKEGVKRGVDIISFGDS-AGTLDILGPKM 197
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
++ + ++ + ++ + +
Sbjct: 198 YKELGGKYTYNVLKEAKNYLGDSIMHLCGITSSSL 232
>gi|325978466|ref|YP_004288182.1| hypothetical protein SGGBAA2069_c12660 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
gi|325178394|emb|CBZ48438.1| hypothetical protein SGGBAA2069_c12660 [Streptococcus gallolyticus
subsp. gallolyticus ATCC BAA-2069]
Length = 333
Score = 53.7 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 105/341 (30%), Gaps = 60/341 (17%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +++ +L+ + ++ P+ W + ++ F PE
Sbjct: 1 MTTKREWVLKAFKNEKVDKVPVGFWY---------HFTTDDERGDGF-----NPE-IFNK 45
Query: 59 TLQPIRRYNFDAAILFSDILV------IADALGRNV-RFVENEGPRMDPITTQEIYLLNP 111
+ +++ D F ++ + + + V E EG
Sbjct: 46 NIAGHKKFVSDVDPDFVKVMSDGFFTYPNEQIHQGVTSIKELEGIV-------------- 91
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+I ++ + +R+ P I AP T + ++G F
Sbjct: 92 SIGENHPWITQQVELAKKIREDFPEDIASFYNIFAPVTYLKWQLAGKGGNGDEIIENFIK 151
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAAR- 224
+++ +LD ++ I AGVD I + L + E+
Sbjct: 152 EDAELTKEVLDVVAGDIGILTKRLIKEAGVDGIYL---SVQNLQDSRSSKEEYNQVIKPG 208
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALEL 279
+ + A+ N I +GA + TD A ++W+ V LS +L
Sbjct: 209 ELHILNRAISAGGTNILHICGYEGAT---NDITYYTDYPADVINWAVELEGVSLSEGRQL 265
Query: 280 QKEGPVQG---NLDPMRLV-VGNQVMIDGVNAILDVLGSGP 316
V G N + L + + V +LD G
Sbjct: 266 FGGKTVLGGFENTEKGLLYLGSKEAIQGKVKELLDEAGRQG 306
>gi|300855237|ref|YP_003780221.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435352|gb|ADK15119.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 369
Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 62/194 (31%), Gaps = 19/194 (9%)
Query: 160 IKDHGQNRVFA--YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----- 212
++ Y+ LD + + + E L QI V + +F G
Sbjct: 178 SGARSISKFMRDLYRMPDKVQAALDVILEDTLESLRQQIRE-VKPLTVF---VGAARAAG 233
Query: 213 --LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-GLDW 269
L F+ + + +I+ V + A L + L + I D
Sbjct: 234 DFLSLKLFDRFMWPYLKKIVEVVVDEGSFAYL-HLDMCWDRFLDYFLELPKAKCIFSPDS 292
Query: 270 SVPLSFALELQ-KEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP 327
+ + A ++ + G++ P L + + ++ +G FI G + P
Sbjct: 293 TTDIFKAKKVLDGHMCIMGDVSPSLLTLGTPDDVHAYCMRLMKEIGPDGFIMAAGC-MLP 351
Query: 328 -QVDPKNVLDLVKT 340
+NV ++
Sbjct: 352 ANAKVENVKAMLSA 365
>gi|300855248|ref|YP_003780232.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435363|gb|ADK15130.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 370
Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 15/201 (7%)
Query: 148 WTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFD 207
TV Y+ G + ++ ++ L+ + + E L QI + F
Sbjct: 173 ITVNEYLSGGRSMAKFMRD---LFRMPDKVEAALEVIQKENLEKLRKQIRETKPEVM-FL 228
Query: 208 THA----GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN 263
+ A +E + + + A+ + I L ++
Sbjct: 229 SPARGASEFFSPKLWERFVWKYIKETADAIIEE-GAVCAIHCDGNWERDLSYFKDFPKGK 287
Query: 264 AI-GLDWSVPLSFALEL-QKEGPVQGNLDP--MRLVVGNQVMIDGVNAILDVLGSGPFIF 319
I D + E+ ++G++ P ++ + ++D +G+G FI
Sbjct: 288 VIFETDGMTDIYKIKEVLGSTVCIKGDV-PAAKLVLSTPDDIYSYSKKLIDDMGTG-FIL 345
Query: 320 NLGHGITPQVDPKNVLDLVKT 340
G I P +NV +V
Sbjct: 346 ASGCSIPPNAKVENVKAMVSA 366
>gi|323694303|ref|ZP_08108477.1| hypothetical protein HMPREF9475_03341 [Clostridium symbiosum
WAL-14673]
gi|323501649|gb|EGB17537.1| hypothetical protein HMPREF9475_03341 [Clostridium symbiosum
WAL-14673]
Length = 351
Score = 53.3 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 46/329 (13%), Positives = 96/329 (29%), Gaps = 42/329 (12%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNF---LDMCYTPEYTVELT 59
+ ++ L VL ++ P+ + + + +F ++ E +E
Sbjct: 2 TKHERFLNVLANKPVDRVPVAF----------FHHFLEDWTDFGKGIEDDEVFEKNIEGH 51
Query: 60 LQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNY 119
+ ++ D A + +D L + V + T + +
Sbjct: 52 RIARKLFDPDVAKVMNDSL-----MLMPVE--------ASFVKTAADLRKIEPLSSGSGF 98
Query: 120 LLPIFQSISILRKKLPN-HITLIGFCGAP-WTVASYMISGGFI---KDHGQNRVFAYQNS 174
+ + +R+ + + +P + S + G + F +
Sbjct: 99 VKRTLELTKRVREIYADSDAPVYATSFSPTLVLRSALPEGRRPGLGGPETVIKRFIKEEP 158
Query: 175 RAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQI-FDTHAGCLGEHEFENYAARSVGRIISA 232
A +S+ E I GVD I + + AG E + Y + ++
Sbjct: 159 EALGEACKTVSEGIMELNRLLIKECGVDGIYLSVNNQAGFFPEEIYRTYISPFEKAVLDD 218
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEGPVQG 287
K + + G + T NA +W V LS L V G
Sbjct: 219 -ANKLSDVNILHICGFIGQG-NDLNLFTGFNAAAYNWDVHTEKVSLSQGKRLFGGKAVFG 276
Query: 288 NLDPMRLVVGN--QVMIDGVNAILDVLGS 314
+ ++ + + ILD G
Sbjct: 277 GFEQKGVLYKGTREEVEKYTYQILDEAGQ 305
>gi|332982633|ref|YP_004464074.1| uroporphyrinogen-III decarboxylase [Mahella australiensis 50-1 BON]
gi|332700311|gb|AEE97252.1| uroporphyrinogen-III decarboxylase [Mahella australiensis 50-1 BON]
Length = 361
Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 65/183 (35%), Gaps = 14/183 (7%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF-DTHAGCLGEHEFENYAARSVGRII 230
+ L++ + + E + ++I ++ DT + F+ Y + +
Sbjct: 176 DYPDEMHDLMEAMHKSNLECYKVMAESPAEIIIVYEDTSTTVMSPRWFDMYCTDYLNQYA 235
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL-------SFALELQKEG 283
+ + I + G + ++ + G+D P ALE+
Sbjct: 236 DVLHKAGK----IYISHMCGKLKGMRYQVANLTVDGVDSICPPTTGDTWAHEALEMWPGK 291
Query: 284 PVQGNLDPMRL-VVGNQVMIDGVNAILDVLGSG-PFIFNLGHGITPQVDPKNVLDLVKTV 341
+ G ++P L + + V IL+ + G FI + G + +N++ + + +
Sbjct: 292 VIIGGIEPPALKRMSVDQTKEYVLDILENIAPGDRFILSTGDATSYGTPIENLIAITELI 351
Query: 342 RSE 344
+
Sbjct: 352 KQY 354
>gi|298675594|ref|YP_003727344.1| methyltransferase cognate corrinoid protein [Methanohalobium
evestigatum Z-7303]
gi|298288582|gb|ADI74548.1| methyltransferase cognate corrinoid protein [Methanohalobium
evestigatum Z-7303]
Length = 640
Score = 53.3 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/321 (12%), Positives = 99/321 (30%), Gaps = 37/321 (11%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN 110
PE + + ++D + D+ + A LG + + E + P +
Sbjct: 320 DPEMFAQSAYAGAKYLDYDMFVGLIDLSITAGDLGCEITYPEEDTPSSKGHLEDYEEIEV 379
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPN-HITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
P + + Q+ + ++KL ++GF P + ++ RV
Sbjct: 380 PEVKEGTRAYELV-QATKLAKEKLHEIGKPVVGFHEGPLLTLTQLMGAD--------RVM 430
Query: 170 AY--QNSRAFNWLLDFLSDVSAEYLIAQIHAGV-DVIQIFDTHAG--CLGEHEFENYAAR 224
N +D +D D + I + + + E ++ + +
Sbjct: 431 MDMKTNPEVVRDAVDKCADYVNLVTEKFFEEDACDALCIDNLWSNNKIMSEDDYWKFDGK 490
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL------- 277
+ + +KY I + + + ++ +
Sbjct: 491 FIVDKHVPLFKKYDQPYMIHSCADSVHYDTQISKF-GTDLFSYAYYPNEREQGSKNYSDL 549
Query: 278 --ELQKEGPVQGNLDPMRLVVGNQVMIDGVNA-----------ILDVLG-SGPFIFNLGH 323
+ E + G +DP++ + + ID + + L+ G ++ + G
Sbjct: 550 IPKYGHECCMMGEVDPIQFMDNSSETIDKIKSDTDNVLTGALNTLNENGLQSKYVVSTGC 609
Query: 324 GITPQVDPKNVLDLVKTVRSE 344
I P V +++ V+ +
Sbjct: 610 EIPPGGSLTGVKEMIDLVKEK 630
>gi|288905476|ref|YP_003430698.1| hypothetical protein GALLO_1275 [Streptococcus gallolyticus UCN34]
gi|288732202|emb|CBI13767.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
Length = 333
Score = 52.9 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 52/341 (15%), Positives = 104/341 (30%), Gaps = 60/341 (17%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +++ +L+ + ++ P+ W + ++ F PE
Sbjct: 1 MTTKREWVLKAFKNEKVDKVPVGFWY---------HFTTDDERGDGF-----NPE-IFNK 45
Query: 59 TLQPIRRYNFDAAILFSDILV------IADALGRNV-RFVENEGPRMDPITTQEIYLLNP 111
+ +++ D F ++ + + + V E EG
Sbjct: 46 NIAGHKKFVSDVNPDFVKVMSDGFFTYPNEQIHQGVTSIKELEGIV-------------- 91
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+I ++ + +R+ P I AP T + ++G F
Sbjct: 92 SIGENHPWITQQVELAKKIREDFPEDIASFYNIFAPVTYLKWQLAGKGGNGDEIIENFIK 151
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCL-----GEHEFENYAAR- 224
+++ +LD ++ I AGVD I + L + E+
Sbjct: 152 EDAELTKEVLDVVAGDIGILTKRLIKEAGVDGIYL---SVQNLQDLRSSKEEYNQVIKPG 208
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALEL 279
+ + A+ N I +GA + TD A ++W+ V LS +L
Sbjct: 209 ELHILNRAISAGGTNILHICGYEGAT---NDITYYTDYPADVINWAVELEGVSLSEGRQL 265
Query: 280 QKEGPVQGNLDPM---RLV-VGNQVMIDGVNAILDVLGSGP 316
V G + L + + V +LD G
Sbjct: 266 FGGKTVLGGFENTKKGLLYLGSKEAIQGKVKELLDEAGRQG 306
>gi|281356137|ref|ZP_06242630.1| Uroporphyrinogen-III decarboxylase-like protein [Victivallis
vadensis ATCC BAA-548]
gi|281317506|gb|EFB01527.1| Uroporphyrinogen-III decarboxylase-like protein [Victivallis
vadensis ATCC BAA-548]
Length = 368
Score = 52.9 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/395 (12%), Positives = 107/395 (27%), Gaps = 84/395 (21%)
Query: 1 MNERKQKILEVLQGNVINPPPI----WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M R +++L L + P W+ YL Y ++ + +
Sbjct: 3 MTSR-ERMLTALDNKRPDRLPCQVHGWMDY----YLKTYL----GGADWYEANRRLGFDY 53
Query: 57 ELTLQPIRRYNFDAA----ILFSDILVIADALGRNVRFVENEGPRMDPI---------TT 103
+ + P RY + D+ AD + F+ G + + T
Sbjct: 54 AIYVSPTYRYEPKTLEKWQVKTVDLGTDADGNHTHEEFITTPGGTLHKVVSRNAFTAWDT 113
Query: 104 QEIYLLNPNIDLFLNYLLP----IFQSISILRKKLPN-----HITLIGFCGAPWTVASYM 154
+ + + +L+ Y I+ +R+KL + G+PW +
Sbjct: 114 EPLLKTIADFELWDRYSPEPSGADLSEIARVREKLGDLGIVRSHPFSPGQGSPWQSFCTL 173
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--- 211
+ + + +LD + + + A D++++ G
Sbjct: 174 FGTQ------EAILLGMDEPETLHHILDAILAKTLKATRFWEGARTDMVEV----GGGAG 223
Query: 212 ---CLGEHEFENYAARS---VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI 265
+ + + R+ + K N F G ML+ + ++
Sbjct: 224 SSTVISPEFYREFGLPYDTAQNRLFHEIGLKVVN----HFCGGLMPMLE-LAVESGAD-- 276
Query: 266 GLDWSVPL---------SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG- 313
GL+ P + + G D ++ V +
Sbjct: 277 GLETMTPPSMGGDCNLAEASKRVGDRLFFIGGFDQNAGFERGNPALVRRMVFDCFEATRD 336
Query: 314 SGPFIFNLGHGITP-----QVDPKNVLDLVKTVRS 343
+I I P D N+ +
Sbjct: 337 HAGYI------IAPSDHFFFGDLANLKAFTDACKE 365
>gi|332982333|ref|YP_004463774.1| hypothetical protein Mahau_1771 [Mahella australiensis 50-1 BON]
gi|332700011|gb|AEE96952.1| hypothetical protein Mahau_1771 [Mahella australiensis 50-1 BON]
Length = 389
Score = 52.9 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 16/143 (11%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAK-FISFAKGAGYMLKNYRRLTDSNAIG------ 266
F ++ ++ + + A +++ TD N I
Sbjct: 248 SPDIFRRLGLPTIKKVTRMAKEA--GVPTMLHSCGKARKLVEMLADETDLNCINPLEKPP 305
Query: 267 LDWSVPLSFALELQKEGPVQGNLDPM--RLVVGNQVMIDGVN-AILDVLGSGPFIFNLG- 322
+ + + + + GNL L+ + + AI D G FI + G
Sbjct: 306 MGDCILRDIKAQFGNKIALMGNLHTTEVMLMGTVEDVERAAKQAIDDAAEGGGFILSTGD 365
Query: 323 -HGITPQVDPKNVLDLVKTVRSE 344
G +N+ +++ R+
Sbjct: 366 QCG--RDTPEENIFKMIEVARTY 386
>gi|182415470|ref|YP_001820536.1| hypothetical protein Oter_3659 [Opitutus terrae PB90-1]
gi|177842684|gb|ACB76936.1| hypothetical protein Oter_3659 [Opitutus terrae PB90-1]
Length = 356
Score = 52.5 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 20/200 (10%)
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNR-VFAYQNSRAFNWLLD---FLSDVSAEY-LIAQ 195
+G P+++A+ +++ + A LL+ L+ + + + Q
Sbjct: 129 VGMSIGPFSLATKLLADPITPVYLAGDGATAADEPEV--GLLETALRLALATVRHAIRQQ 186
Query: 196 IHAGVDVIQIFDTHAG--CLGEHE-------FENYAARSVGRIISAVRRKYPNAKFISFA 246
+ AG I I + A + F+ +A I + + + + F
Sbjct: 187 LDAGARAIFIAEPAANKVFFSPKQIAGGSNVFDRFALAPNRAIAAQLVAREADLLFHCCG 246
Query: 247 KGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLVV----GNQVMI 302
+ ML + L + A + K+ + GNL + + +
Sbjct: 247 ELVDAMLDGFCSLRPALLSLGSSRRLWEDAARVPKDIVLYGNLPSKQFYSDSVMPLEKVG 306
Query: 303 DGVNAILDVLGSGPFIFNLG 322
+L + F LG
Sbjct: 307 AQAGELLARMRQVGHPFILG 326
>gi|269929229|ref|YP_003321550.1| uroporphyrinogen decarboxylase (URO-D) [Sphaerobacter thermophilus
DSM 20745]
gi|269788586|gb|ACZ40728.1| Uroporphyrinogen decarboxylase (URO-D) [Sphaerobacter thermophilus
DSM 20745]
Length = 319
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/344 (13%), Positives = 93/344 (27%), Gaps = 65/344 (18%)
Query: 3 ERKQKILEVLQGNVINPPPIWL---MRQAGRYLPEY--RQIRKKFKNFLDMCYTPEYTVE 57
+ ++I+ + G ++ P+ R PE R++ + NF +
Sbjct: 8 TKTERIMAAVNGEEVDRVPVCFWHHFR------PEGSGRRLAEATFNFFEAT-------- 53
Query: 58 LTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFL 117
++ D + DI PR + L+ P
Sbjct: 54 --------FDLDILKIMPDIPYPF--------------PRRSITKPDDWLLVEPIDQERS 91
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
Y +I LR + + +I +P A Y +D ++
Sbjct: 92 RYFTQRAMAIRALRDMVGFDVPIIMTVFSPLAEAMYAAE---SRDLFL--RHLQEHPTFV 146
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFD----THAGCLGEHEFENYAARSVGRIISAV 233
+ L + ++ I AG D + F T A + + +
Sbjct: 147 HQALATYAQNLRAHIQDCIDAGADGV-FFALQGCTSA-IMSRELYREVGRPYDLLALQGA 204
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSF----ALELQKEGPVQGNL 289
+ N + G + + D L WS L+ + + G
Sbjct: 205 IDGWLNVLHVH-----GDRDLFFDDVLDYPVQVLSWSDRLAGPSLREARTKTSKCLMGGW 259
Query: 290 DPMRLV--VGNQVMIDGVNAILDVLGSGPFI-FNLGHGITPQVD 330
+ + + + + G FI N G + D
Sbjct: 260 HEFGALSNGPVEKIREEAQDAIRQTGGRKFILAN-GCSVPDDTD 302
>gi|219668597|ref|YP_002459032.1| uroporphyrinogen decarboxylase [Desulfitobacterium hafniense DCB-2]
gi|219538857|gb|ACL20596.1| Uroporphyrinogen decarboxylase (URO-D) [Desulfitobacterium
hafniense DCB-2]
Length = 371
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG-LDWS 270
L + +++ + ++I + + F L ++ I LD
Sbjct: 237 MLSQAQWDRFVFPYYEKLIYEILD-AGITPILHFDSDWTRDLARFKDFPKGKIILELDGM 295
Query: 271 VPLSFALELQKE-GPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITP 327
+ A E+ + + G++ P L+ + + +++ +G FI + G I
Sbjct: 296 TDIYKAKEILGDTMCIMGDV-PAALLTLGTPDAVHNYCRKLIEEIGPTGFILHPGCDIPI 354
Query: 328 QVDPKNVLDLVKTVRSE 344
+NV +V +V S+
Sbjct: 355 DAKIENVQAMVASVTSK 371
>gi|325261157|ref|ZP_08127895.1| hypothetical protein HMPREF0240_00122 [Clostridium sp. D5]
gi|324032611|gb|EGB93888.1| hypothetical protein HMPREF0240_00122 [Clostridium sp. D5]
Length = 364
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 26/258 (10%)
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
P+ E + L + + L ++ N +I P+ + +
Sbjct: 107 PVKGWEDWEKLKKERLNPDSPERFPDNWESLAEEYNNGDYVIQLGWYPYGLFGTLRDMMG 166
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSD---VSAEYLIAQIHAGVDVIQIFDTH---AGCL 213
+++ + Y + + ++D L+D E + + VD I +++ G L
Sbjct: 167 VENLL---IMFYDDPDLIHAMMDGLTDFWLAIYEKVCRTVK--VDAIHMWEDMSGKGGAL 221
Query: 214 -GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
+ + R+ A + F G L + N I +P
Sbjct: 222 ISPAMIREFMMPNYKRM-KAFADAHDIPMFSLDTDGDCTQLVPLFLESGINTI-----LP 275
Query: 273 LSFA--------LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHG 324
A EL + + G +D + G + ++ I + +I L H
Sbjct: 276 FEVACGSDVVKYRELYPDLCIYGGIDKREIAKGKLAIDRELDRIDKMFDYPGYIAALDHL 335
Query: 325 ITPQVDPKNVLDLVKTVR 342
I P + + V+ +R
Sbjct: 336 IPPDITRGDFEYFVQELR 353
>gi|309790506|ref|ZP_07685064.1| Uroporphyrinogen decarboxylase (URO-D) [Oscillochloris trichoides
DG6]
gi|308227422|gb|EFO81092.1| Uroporphyrinogen decarboxylase (URO-D) [Oscillochloris trichoides
DG6]
Length = 328
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/358 (17%), Positives = 110/358 (30%), Gaps = 49/358 (13%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M + +L + PI W R+ P Q+ E
Sbjct: 1 MLSKHDLLLATIARKPTPHIPIALW------RHWPAEDQV-------------AEDLARA 41
Query: 59 TLQPIRRYNFDAA-ILFSDILVIADALGRNVRFVENEGPRMD---PITTQEIYLLNPNID 114
TL +RY+FD + S + V DA V EG + PIT+ E +
Sbjct: 42 TLDFQQRYDFDFIKLTPSQVFVAEDAGLTGVYEGNPEGDLVKNAAPITSLEQWEALRPQT 101
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+ L + + ++ N +I P TVA+ + + ++ +
Sbjct: 102 IQQGALARQLRCLQLVI-AGANETPVIQTIFNPLTVAACLAG-------ERAILWRRRYP 153
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRII 230
F L + ++ A I AG IF + A + E E+ + S ++
Sbjct: 154 EIFQRGFAMLIETWRNFVEAVISAGAAG--IFFSTADATYRRMSEEEYMRWGRPSDLEVL 211
Query: 231 SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE--LQKEGPVQGN 288
SA R + N I ++ +Y + D E V G
Sbjct: 212 SAARAGWFNVLHIHGEDLMFKLVADY----PVQVLNWDDRRAGPSLREGQALVSKAVAGG 267
Query: 289 LDPM--RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP-QVDPKNVLDLVKTVRS 343
+ L + + V + G +I G + P +N+ + R
Sbjct: 268 IGQWGALLQGSIEEVRAQVADGIAQTGGVGYIAAPGC-VMPIPTPERNIRAAISAARG 324
>gi|290580622|ref|YP_003485014.1| hypothetical protein SmuNN2025_1096 [Streptococcus mutans NN2025]
gi|254997521|dbj|BAH88122.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 335
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 55/330 (16%), Positives = 115/330 (34%), Gaps = 45/330 (13%)
Query: 3 ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+K+ +L+ +G ++ P+ W Y + ++ F PE + L
Sbjct: 4 SKKEWVLKAFKGERVDKVPVGFW-----------YHFLAEE--EFGQGLDNPEL-FKKNL 49
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
Q +++ + F + NE + + QE+ ++ + +
Sbjct: 50 QGHQKFIKEVDPDF------IKLMSDGFFTYPNELIHTNVTSIQELANISSIGENHPWFD 103
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL 180
+ Q + +++ I I +P T + +SG G F ++++ +
Sbjct: 104 QQV-QLVKAIKESFTEDIVAIYNIFSPVTYLKWQLSGQVAHGDGIIARFLQEDAQTLKKV 162
Query: 181 LDFLSDVSAEYLIAQI-HAGVDVI-----QIFDTHAGCLGEHEFENYAARSVGRIISAVR 234
L+ ++ A I AG++ I I D++ ++ NY S II A +
Sbjct: 163 LNVIAGDIATLTRKIIAEAGLEGIYLSVQSIQDSNV---TSEDYRNYITPSDLTIIEAAQ 219
Query: 235 R-KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGPVQG- 287
+ + I +GA +K ++ A +W+V L+ +L V G
Sbjct: 220 QVQGLTVLHICGYEGASNDIKLFKDYP---AQVFNWAVGPEGISLAQGRKLFGGKTVLGG 276
Query: 288 --NLDPMRLV-VGNQVMIDGVNAILDVLGS 314
N L + V +L G+
Sbjct: 277 FVNTKDGILYKGSKDDIQTEVKKLLQESGT 306
>gi|295102533|emb|CBL00078.1| Uroporphyrinogen-III decarboxylase [Faecalibacterium prausnitzii
L2-6]
Length = 344
Score = 51.8 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 81/253 (32%), Gaps = 40/253 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M +K++ VL + + PP+ W R +K + + VE
Sbjct: 1 MWTKKERFEAVLNHELADRPPVSAW------------RHFTEKEHS------GADLFVET 42
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG--PRM--DPITTQEIYLLNPNID 114
L+ Y++D L +A G + + EG P++ DPI +
Sbjct: 43 MLKWQNTYDWDYVKLQPRASYYEEAWGGQFDYNDYEGVLPKVVKDPIGGVADLEKITVLP 102
Query: 115 LFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN------RV 168
+ I ++ L I + P ++ + + I +
Sbjct: 103 GDQGVFAEQIEVIQKMKAGLNEDIPMFQTMMCPTSILQKLCAVNPIGRYRAASRDDLMMT 162
Query: 169 FAYQNSRAFNWLLDFLSDVSAEYLIAQIH-AGVDVIQIFDTHAGCLGEHEF------ENY 221
++ + L ++D A+Y I AG+ + A L + E +
Sbjct: 163 LMHEQPERIHKTLQNITDTMADYSKHLIEDAGLYGVFY---GATGLSRSTYMTKEEWEEF 219
Query: 222 AARSVGRIISAVR 234
+++ A++
Sbjct: 220 VKPYDLQMMEALK 232
>gi|325264594|ref|ZP_08131324.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324030256|gb|EGB91541.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 346
Score = 51.8 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL--DWSV 271
+ Y + ++I +RR P + G+ + N I + S
Sbjct: 206 SPDLWRKYLKPRMKKVIDEIRRISPGIPVAYHSCGSIRPILKDLEEVGINVINPLQESSC 265
Query: 272 PLSFA--LELQKEGPVQ--GNLDPMRLVV--GNQVMIDGVNAILD-VLGSGPFIFNLGHG 324
+ A K V G +D ++ + + IL+ + G +I + H
Sbjct: 266 DMDHAEIRNGLKAETVMFCG-IDTQTFLLTEPADAVGRKMTEILELLAARGRYICGVSHT 324
Query: 325 ITPQVDPKNVLDLVKTVRSEKI 346
+ P + +N+ +++++ K+
Sbjct: 325 LQPDIPSENIEAMIQSLNMYKV 346
>gi|325264658|ref|ZP_08131387.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
gi|324029950|gb|EGB91236.1| putative uroporphyrinogen decarboxylase (URO-D) [Clostridium sp.
D5]
Length = 358
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/369 (13%), Positives = 116/369 (31%), Gaps = 46/369 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEY------ 54
M + ++++ V + + P+W G P++ K ++FL++ +
Sbjct: 1 MTSK-ERVMAVFAHQIPDRVPMW----CGAS-PDFMA---KARSFLNVKSDEDVFLRFHD 51
Query: 55 ---TVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNP 111
V R+N D + I + + + + P+ + ++
Sbjct: 52 DFRRVYSRYTGPDRFNPDYDSGDGKTVSIFGIEREGIGYGQA---ALHPLAGASVEEIHA 108
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPW-TVASYMISGGFIKDHGQNRVFA 170
++ +S +R+ G W + I +++ +
Sbjct: 109 YSWPSPDWYD-----VSHIREDALAWDNQYAILGGEWCPIFHDAIDLLGMENM---MILM 160
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF----D--THAGCL-GEHEFENYAA 223
Y++ + +L ++D E A I IF D + G L GE F +
Sbjct: 161 YEDPDIVHAVLSHVTDFYYELSKRVFEAARGAIDIFFIGNDLGSQTGPLIGEGLFREFIC 220
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD----WSVPLSFALEL 279
+ R+ + ++Y + ++ S L P
Sbjct: 221 PYLKRLTD-LGKEYGLPTMMHCCGSYTQLMPALIENGISAVQSLQPITREMQPAYLKEHF 279
Query: 280 QKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVLG-SGPFIFNLGHG-ITPQVDPKNVL 335
+ G +D + +++ + + + + G +I + H + + +NVL
Sbjct: 280 GGRLILNGCIDSIDILINGNVEDTVRATRDTVRCMKPGGGYILSPSHDYLLEETPVENVL 339
Query: 336 DLVKTVRSE 344
+ T E
Sbjct: 340 AMYDTCLEE 348
>gi|325264590|ref|ZP_08131320.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324030252|gb|EGB91537.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 377
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 41/270 (15%)
Query: 100 PITTQEIYLLN----PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAP----WTVA 151
P+ EI L+ P+ + L I K L + P + +
Sbjct: 117 PLKDAEIGDLDSYPFPDPESISGEEL---DQIEQEAKALYEDTDYVICAEHPVYGIFELG 173
Query: 152 SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV-----------SAEYLIAQIHAGV 200
+M + + + D +Y+
Sbjct: 174 CWMCG------FDEFLYRIAAEPEFVEKFFEKVLDYQKKVLKQYYGRIGKYIHYTSSGDD 227
Query: 201 DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
Q +A + F +Y I + + +A ++ + G+ YML + +
Sbjct: 228 YATQ----NAPFVSPGMFRDYIKPYFQERIRYTK-ELTDAYYLHHSCGSVYMLLDDLIDS 282
Query: 261 DSNAIG-----LDWSVPLSFALELQKEGPVQGNLDPMRL--VVGNQVMIDGVNAILDVL- 312
+ P E G +D L + Q + + V +D++
Sbjct: 283 GVEILNPIQPKAKDMGPERLKSEFGDRIVFHGGIDTQELLPFLDEQRIREEVAKTIDIMI 342
Query: 313 GSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
G +IF H I V P+ + +++T R
Sbjct: 343 QDGGYIFAAAHNIQEDVAPEKLTVMLETAR 372
>gi|83590937|ref|YP_430946.1| uroporphyrinogen-III decarboxylase-like [Moorella thermoacetica
ATCC 39073]
gi|83573851|gb|ABC20403.1| Uroporphyrinogen-III decarboxylase-like protein [Moorella
thermoacetica ATCC 39073]
Length = 339
Score = 51.4 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 13/156 (8%)
Query: 197 HAGVDVIQIFD----THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM 252
AG I I D + + + + + ++ I + G
Sbjct: 180 QAGAHAIIIGDDIAYSQGTYIRPDIWRELFLPLLRHQVEGIKAL--GLPVIYHSDGNLKA 237
Query: 253 LKNYRRLTDSNAI-GLDWSVPLSFA---LELQKEGPVQGNLDPMRLVVGNQVMIDGVNAI 308
L + + GL+ + + E ++ + GN D LV G+ I
Sbjct: 238 LLPDLAALALDGLQGLEPTAGMDIGTLKKEYGEKLCLMGNFDLDLLVSGDPETITAAAER 297
Query: 309 LDVLG--SGPFIFNLGHGIT-PQVDPKNVLDLVKTV 341
L G +IF+ GI + P+NV L + V
Sbjct: 298 LLAEAAPGGGYIFSTACGILNASLPPENVRALYRAV 333
>gi|332982805|ref|YP_004464246.1| uroporphyrinogen-III decarboxylase-like protein [Mahella
australiensis 50-1 BON]
gi|332700483|gb|AEE97424.1| uroporphyrinogen-III decarboxylase-like protein [Mahella
australiensis 50-1 BON]
Length = 335
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/217 (12%), Positives = 68/217 (31%), Gaps = 31/217 (14%)
Query: 152 SYMISGGFIKDHGQNRVFAYQ---------NSRAFNWLLDFLSDVSAEYLIAQIHAGVDV 202
++ ++G + N + LLD ++D + + + +D
Sbjct: 126 TFKVAGIGFSMFERAWTMRGMENLLTDMLLNPDFVDKLLDTIADFNMHLMDIILDYDIDC 185
Query: 203 IQIFDTHAGC----LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR 258
D +G ++ + + R+ + + G + L
Sbjct: 186 FYFGDDWGQQHGLIMGPRLWKRFIKPRMARMFK--KAHDAGKYVALHSCGDIHEL----- 238
Query: 259 LTDSNAIGLDWS-------VPLSFALEL-QKEGPVQGNLDPMRL--VVGNQVMIDGVNAI 308
D IGLD ++ L G + ++ V + +
Sbjct: 239 FPDLIEIGLDIYNTFQPEIYDVNEIKRLYGDRLTFWGGISTQQVLPFVSPDEIKRVARYM 298
Query: 309 LDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
++ + +G +I H I V +N++ L++ +++
Sbjct: 299 METMSYNGGYIAAPTHAIPSDVPAENIVALIEAFQNQ 335
>gi|260662203|ref|ZP_05863099.1| uroporphyrinogen-III decarboxylase [Lactobacillus fermentum
28-3-CHN]
gi|260553586|gb|EEX26478.1| uroporphyrinogen-III decarboxylase [Lactobacillus fermentum
28-3-CHN]
Length = 337
Score = 51.0 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/363 (13%), Positives = 116/363 (31%), Gaps = 45/363 (12%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+ ++++L+ + P+ W R+ E F D P ++
Sbjct: 1 MSLPREEVLKAFHNQEVEHVPVSFW------RHFAE--------SEFTDASQEPAVL-DI 45
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
LQ R Y + F+ + + F +P ++ L P +
Sbjct: 46 NLQGHRDYYQAVDVDFAKTM-------LDGYFPYPFRGVENPRDLDDLANLVPLEEDDPW 98
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRV----FAYQNS 174
+ +++ + ++ + +P + + + + V +N
Sbjct: 99 IQDQV--ALAKEQNQIVGDLPTFITVFSPLILLKWAQIDHTKESILTSDVKFADLYEKNP 156
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGE-HEFENYAARSVGRIISAV 233
+L ++ + + A + G +V I+ + + + + + +I +
Sbjct: 157 ERVEQVLQVIAADQGKVVRA-LKKGTEVDGIYYSTQSIQDPREDNLEFFKKVM-ELIDLI 214
Query: 234 RRKYPNAKF---ISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEGPV 285
++ N F I G + T+ ++W+ VPL +L + PV
Sbjct: 215 VQEEINRNFDLNILHVCGFAGAYNHLEWFTNYPLQVINWATLTDGVPLGEGKKLFGDRPV 274
Query: 286 QGNLDPM---RLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G D L G + + V ++D G I + + ++ +++
Sbjct: 275 LGGFDNSIKGLLYTGTKEEIQQNVRDLIDEAGKKGVILGADCTVPRDIPYDHLRWVIEAE 334
Query: 342 RSE 344
R
Sbjct: 335 RDY 337
>gi|227432933|ref|ZP_03914875.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351279|gb|EEJ41563.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 343
Score = 51.0 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/322 (14%), Positives = 108/322 (33%), Gaps = 39/322 (12%)
Query: 46 LDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQE 105
LD PE E + ++ + F ++ + + + +
Sbjct: 32 LDAFKNPEII-EGNILGTKKLVETTSPDFVKLMSDG-LFHYEFNYQDAD-------DKRV 82
Query: 106 IYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
+Y I +L+ + ++ + + +P T+ + + + +
Sbjct: 83 VYANLSPIADNHPWLIKTADLVRRQKQVIGERASFY-NVFSPTTLLKWALVKNPDGHYDK 141
Query: 166 NRV------FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI----QIF-DTHAGCLG 214
++ +S L+ ++ + + A ++AG + I Q+ DT LG
Sbjct: 142 SKADEKLADIILTDSENVCQALEVITLDVIKQVKAAVNAGANGIYYSTQVIQDT---RLG 198
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV--- 271
+F+ + A + +++ A + + + G G + A ++WSV
Sbjct: 199 HADFDEFVAVTDKQVLKA-ANQLSDTNILHIC-GNGGARNAISWFENYPASIVNWSVHTE 256
Query: 272 --PLSFALELQKEGPVQG---NLDPMRLVVGNQ-VMIDGVNAILDVLGSGPFI--FNLGH 323
L E+ V G N L G Q + ++ G+ I N
Sbjct: 257 DISLHEGKEIFPGKIVLGGFGNTAKDVLYRGTQSEIQQFAKRLVQEAGADNLIIGAN--C 314
Query: 324 GITPQVDPKNVLDLVKTVRSEK 345
+ +DP+++ ++ V+ E
Sbjct: 315 TVPRDIDPQHLQWAIEAVQKES 336
>gi|86278258|gb|ABC88390.1| unknown [Eubacterium barkeri]
Length = 304
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 67/177 (37%), Gaps = 9/177 (5%)
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISA 232
+ L+ F ++V+ + I AG+D+I + D + F+ A S +
Sbjct: 13 DEDYVRELVGFCAEVAIKMSEMYIEAGMDIIAVVDPLVSQIAPESFDAMLAESFTAVFDY 72
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--QKEGPVQGNLD 290
+R + + F G + T+ ++I +D +V + + Q + GN+
Sbjct: 73 IRSR--DRFSSFFVCGNATPQLDVMCKTNPDSIAVDENVDFKYGKSVSDQYNIAISGNI- 129
Query: 291 P---MRLVVGNQVMIDGVNAILDVLGSGPF-IFNLGHGITPQVDPKNVLDLVKTVRS 343
P + L V +LD + I + G + V +N + + V+S
Sbjct: 130 PLTVVMLHGEPNDNRKCVIDLLDSIEDKRNMIVSPGCDMPYDVPLENTIACAQAVKS 186
>gi|325261581|ref|ZP_08128319.1| hypothetical protein HMPREF0240_00555 [Clostridium sp. D5]
gi|324033035|gb|EGB94312.1| hypothetical protein HMPREF0240_00555 [Clostridium sp. D5]
Length = 350
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 52/329 (15%), Positives = 93/329 (28%), Gaps = 52/329 (15%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
MN R ++IL L + P W++ K +C T
Sbjct: 3 MNGR-ERILAALNRQEPDRVPTCEWVL---------------NPKVMEQICNT-----AS 41
Query: 59 TLQPIRRYNFDAAILFSD--ILVIADALGRN------VRFVENEGPRMDPITTQEIYLLN 110
L+ +++ + D + D VI D + V + E P PI
Sbjct: 42 DLEFVQKMDLDGIAVGLDSKNTVIDDRHFIDEWGITRVSYDEYPNPVGFPIHELSDLDTY 101
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFA 170
D Y F I + +I V S +D
Sbjct: 102 VMPDPDAPYR---FNKIKKAMELFGQEKCVIARV---RDVFSQPRDLMGFEDFLAG---F 152
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA--GCL--GEHEFENYAARSV 226
Y+ L++ + S+ + G++VI + D A L +
Sbjct: 153 YEEPELVQRLMEMSVEYSSRICENLVELGIEVIVVGDDIANNQALLMNPDMYREQVLPHF 212
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG-LDWSVPLSFAL---ELQKE 282
R++ + K K I + G + T + + +D + A +
Sbjct: 213 ERLVK--KAKSLGLKVIKHSDGDLNSVMEDLVNTGIDCLDPIDARGNMDLAALKEKYGSR 270
Query: 283 GPVQGNLD--PMRLVVGNQVMIDGVNAIL 309
+GN+D + + V L
Sbjct: 271 IAFKGNVDCVDTLVNKPEDQVRREVARCL 299
>gi|297620104|ref|YP_003708209.1| Uroporphyrinogen-III decarboxylase-like protein [Methanococcus
voltae A3]
gi|297379081|gb|ADI37236.1| Uroporphyrinogen-III decarboxylase-like protein [Methanococcus
voltae A3]
Length = 309
Score = 50.6 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 19/176 (10%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDPI---TTQEIYLLNPNIDLFL--NYLLPIF 124
+ V A+A G ++ +N+ GPR++ + +E+ +DL + + +
Sbjct: 59 CRVPFCNTVEAEAFGAIIKLGDNKYGPRVEKYIINSNEELANFETLVDLTMRKGRITNVL 118
Query: 125 QSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+++ L ++ CG P+TV S ++ D +N L+D++
Sbjct: 119 SAVNNLSAS--GEYVILNICG-PFTVISALM------DPKIFYKEIRKNPENAKKLIDYI 169
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKY 237
Y+I + G +I D+ G L G F+NY+ S RII + K
Sbjct: 170 EQGIINYMIEGVKNGAKIISYSDS-VGTLDIVGPRIFKNYSGISNKRIIEQYKLKL 224
>gi|323483441|ref|ZP_08088829.1| uroporphyrinogen decarboxylase [Clostridium symbiosum WAL-14163]
gi|323691054|ref|ZP_08105339.1| uroporphyrinogen decarboxylase [Clostridium symbiosum WAL-14673]
gi|323403295|gb|EGA95605.1| uroporphyrinogen decarboxylase [Clostridium symbiosum WAL-14163]
gi|323504906|gb|EGB20683.1| uroporphyrinogen decarboxylase [Clostridium symbiosum WAL-14673]
Length = 332
Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 85/268 (31%), Gaps = 43/268 (16%)
Query: 3 ERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++++I ++G + P +W +LP + P E T
Sbjct: 2 TKRERIQAAVKGTKPDKLPYSLWT------HLP-------------GIDLDPALLAEKTY 42
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMD----PITTQEIYLLNPNIDL 115
+ + Y+ D ++ + + G + + E +G P+ +L +
Sbjct: 43 EFYKTYDVDFIKTMNNGMYPIEDFGCEIDYSEIAKGGVAKVTKTPVKEAADWLKLTPCPI 102
Query: 116 FLNYLLPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L S+ +L +K + ++ +P T A + + + +
Sbjct: 103 TEGSLARELTSLKLLLEKTKGEDVPVLFTVFSPITTADKISGKTMLTHIREGQG------ 156
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI------FDTHAGCLGEHEFENYAARSVGR 228
LD +++ + I G D + +D+ E+ Y +
Sbjct: 157 ELVKKALDIITETTMALTAEAIRLGADGVFFASQMSSYDSM----TAEEYLEYGKPYDLK 212
Query: 229 IISAVRRKYPNAKFISFAKGAGYMLKNY 256
++ A + + N +LK+Y
Sbjct: 213 VLEAAKDGWFNTIHAHGNNIMFDILKDY 240
>gi|300855089|ref|YP_003780073.1| uroporphyrinogen decarboxylase-like protein [Clostridium
ljungdahlii DSM 13528]
gi|300435204|gb|ADK14971.1| uroporphyrinogen decarboxylase related protein [Clostridium
ljungdahlii DSM 13528]
Length = 289
Score = 50.6 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 12/142 (8%)
Query: 73 LFSDILVIADALGRNVRFV-ENEGPRM-DPITTQEIYLLN-PNIDLFLNYLLPIFQSISI 129
L V +A+G + E GPR D I T+ +LN P ID + + ++
Sbjct: 57 LPFCHTVEGEAMGGIINLGNEKTGPRAKDYICTKAEEILNLPEIDYSKGRISEVLKACKY 116
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
LR K N ++ + P+T+ + +I D + + D +
Sbjct: 117 LRDKGEN---VLLYISGPFTIMNVLI------DPRHVFKLFRKEPDTMKAIFDKFQKETL 167
Query: 190 EYLIAQIHAGVDVIQIFDTHAG 211
++ AGV++I D+ G
Sbjct: 168 RFVEEAKKAGVNMISYADSSGG 189
>gi|160940607|ref|ZP_02087951.1| hypothetical protein CLOBOL_05502 [Clostridium bolteae ATCC
BAA-613]
gi|158436567|gb|EDP14334.1| hypothetical protein CLOBOL_05502 [Clostridium bolteae ATCC
BAA-613]
Length = 326
Score = 50.2 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 112/364 (30%), Gaps = 67/364 (18%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+K+++ ++G ++ P +G L +F + V+ L+
Sbjct: 7 TKKERVTAAIRGEEVDKIP------SGFSL-----------HFPKESAFGDAAVKAHLKF 49
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLP 122
+ D + ++ LV P M I Y + + + ++
Sbjct: 50 FEESDTDILKIMNENLV----------------PYMGEINNGADYSMVKEMTMEDGFMQD 93
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISG---GFIKDHGQNR--VFAYQNSRAF 177
+ + + ++G + + + + D + + ++
Sbjct: 94 QVELVKKILAGCDRDAFILGTLHGITASSIHPLEKMDPNYTYDQVREKLCRLLREDEDTV 153
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVI---------QIFDTHAGCLGEHEFENYAARSVGR 228
+ ++DV E I GVD + + F + EFE + +
Sbjct: 154 LAGMKRIADVMCELARTYIELGVDGVYYAALGGETRFF-------TDEEFEKWIKPFDLQ 206
Query: 229 IISAVRRKYPNAKFISFAKGAGYM--LKNYRRLTDSNAIGL-DWSVPLSFALELQKEGPV 285
I+ A++ F+ K M K+Y D G+ + L ++ +
Sbjct: 207 IMKAIKD-AGGYCFLHICKDQLNMDRYKDYGPYADVVNWGVYEAPFSLEDGRKMFAGKTI 265
Query: 286 QGNLDPMR----LVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQV--DPKNVLDLVK 339
G L P R + + + + ++ G FI LG T D + V+
Sbjct: 266 MGGL-PNRHGVLVDGPAEAVKEETRKVIREFGRTHFI--LGADCTLATEQDMDLLKAAVE 322
Query: 340 TVRS 343
R
Sbjct: 323 AARE 326
>gi|281356090|ref|ZP_06242583.1| hypothetical protein Vvad_PD2675 [Victivallis vadensis ATCC
BAA-548]
gi|281317459|gb|EFB01480.1| hypothetical protein Vvad_PD2675 [Victivallis vadensis ATCC
BAA-548]
Length = 372
Score = 50.2 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 70/253 (27%), Gaps = 27/253 (10%)
Query: 97 RMDPIT---TQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASY 153
P+T + E +L L I ++ R+ G + + Y
Sbjct: 113 VGHPVTDRKSFEEQVLWRMDPATPERLAAIDATLDAARQAEAA-----GMMISQRIIGCY 167
Query: 154 MISGGFIKDHGQNRVFAYQNSRAFNWLLD---FLSDVSAEYLIAQIHAGVDVIQIFD--- 207
M + F Y + + L L+D Q D + +
Sbjct: 168 MYLRSLMGPEEVLYAF-YDDPELIHRCLQGWFRLADAVTA--RYQQAVTFDEVFFAEDIC 224
Query: 208 -THAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFA-----KGAGYMLKNYRRLTD 261
H + + ++++ +R + + + +++ YR
Sbjct: 225 YNHGPLISPEMIREFLFPYYQQLLANIRSRQRDRSRHLYVQLDTDGDCRPVIELYRDGIG 284
Query: 262 SNAIG---LDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVL-GSGPF 317
+ E QG D L G + V+ I V+ G +
Sbjct: 285 CEVFSPLEVASGCDPVELGRKYPELVFQGGFDKRILAAGRDAIDREVDRIFPVMYERGGY 344
Query: 318 IFNLGHGITPQVD 330
+ HG+ +V+
Sbjct: 345 VPTCDHGVPSEVN 357
>gi|325261175|ref|ZP_08127913.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324032629|gb|EGB93906.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 351
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 86/262 (32%), Gaps = 34/262 (12%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQS-ISILRKKLPNHITLIGFCGAPWTVASYM 154
P P++ E N D + + + I +++ + G +P+ + M
Sbjct: 91 PAAHPLSHLESVEDIENYDHWPSPDQIDYDKYIEKMKQ--FQDYAVFGGMWSPFLEQATM 148
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF---DTHAG 211
+ G + Y + + LLD + E D++QI+ D +
Sbjct: 149 LVG-----MENLMMLMYDDPELVDILLDKIVGFYLECNRRMFEKAGDLMQIYFMGDDYGT 203
Query: 212 C----LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL 267
F + + R+ + + + + D IGL
Sbjct: 204 QNSLLYSPDMFRRFIKPRLKRLYDLAKS-------YGYVVQQHSCGSVVKIVPDLIEIGL 256
Query: 268 DWSVPL----------SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSG 315
D P+ + ++ G++D M L+ ++ + + + + + +G
Sbjct: 257 DGLHPIQVSAAGMELKEVKRQFGEQLYFAGSMDAMHLLIDGTDEEVEERIQETMSLFDNG 316
Query: 316 PFIFNLGHGITPQVDPKNVLDL 337
FIF G P++ + ++ +
Sbjct: 317 GFIFGPSQGFLPEIPTERIIKM 338
>gi|255525346|ref|ZP_05392285.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
carboxidivorans P7]
gi|296187955|ref|ZP_06856347.1| hypothetical protein CLCAR_3469 [Clostridium carboxidivorans P7]
gi|255510917|gb|EET87218.1| putative methylcobalamin:coenzyme M methyltransferase [Clostridium
carboxidivorans P7]
gi|296047081|gb|EFG86523.1| hypothetical protein CLCAR_3469 [Clostridium carboxidivorans P7]
Length = 289
Score = 49.8 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 12/142 (8%)
Query: 73 LFSDILVIADALGRNVRFV-ENEGPRM-DPITTQEIYLLN-PNIDLFLNYLLPIFQSISI 129
L V +A+G + E GPR D I T+ +LN P ID + + ++
Sbjct: 57 LPFCHTVEGEAMGGIINLGNEKTGPRAKDYICTKAEEILNLPEIDYSKGRISEVLKACKY 116
Query: 130 LRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSA 189
LR K N ++ + P+T+ + +I D + + D
Sbjct: 117 LRDKGEN---VLLYISGPFTIMNVLI------DPRHVFKLFRKEPDTMKAIFDKFQKEIL 167
Query: 190 EYLIAQIHAGVDVIQIFDTHAG 211
++ AGV++I D+ G
Sbjct: 168 RFVEEAKKAGVNMISYADSSGG 189
>gi|325265474|ref|ZP_08132197.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324029332|gb|EGB90624.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 412
Score = 49.8 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 14/139 (10%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSV 271
+ ++ ++ V + N+ +F G + L + + +
Sbjct: 273 SQEKYRTLFKPYHTQLNEYV---HKNSGMKTFLHSCGSIYPIIGDLIDAGYDVLNPVQTT 329
Query: 272 -----PLSFALELQKEGPVQG---NLDPMRLVVGNQVMIDGVNAILDVLG-SGPFIFNLG 322
P + E + G N + Q + D ++D+ G G F+FN
Sbjct: 330 AYQMDPATLKKEFGNDITFWGGGCNTRSVLNRSTPQEVYDYTRKMIDIFGPGGGFVFNQE 389
Query: 323 HGITPQVDPKNVLDLVKTV 341
H I P V +N+L + K V
Sbjct: 390 HNIMPDVPAENLLAMYKAV 408
>gi|325265479|ref|ZP_08132202.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324029337|gb|EGB90629.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 414
Score = 49.8 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 14/139 (10%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIGLDWSV 271
+++ ++ V + ++ +F G + L + I +
Sbjct: 274 SREKYQELFKPYHKQLNEYV---HKHSNMKTFLHSCGSIYPIMGDLIDAGYDVINPVQTT 330
Query: 272 -----PLSFALELQKEGPVQG---NLDPMRLVVGNQVMIDGVNAILDVLG-SGPFIFNLG 322
P + E + G N + + + + ++D+ G F+FN
Sbjct: 331 AYQMDPATLKREFGNDITFWGGGCNTRSILNRSTPEEVYEYTRRMIDIFAPGGGFVFNQE 390
Query: 323 HGITPQVDPKNVLDLVKTV 341
H I P V N+L + K V
Sbjct: 391 HNIMPDVPGVNILAMYKAV 409
>gi|322374990|ref|ZP_08049504.1| hypothetical protein HMPREF0849_00706 [Streptococcus sp. C300]
gi|321280490|gb|EFX57529.1| hypothetical protein HMPREF0849_00706 [Streptococcus sp. C300]
Length = 347
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 45/340 (13%), Positives = 93/340 (27%), Gaps = 57/340 (16%)
Query: 1 MNERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEY---T 55
M +++ + ++G+ + P+ W + + +K + P +
Sbjct: 14 MASKRELVFRAIRGDEVERVPVGFWF---------HFVTLEEKEQGL----NNPRIFQKS 60
Query: 56 VELTLQPIRRYNFDAAILFSD--ILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNI 113
V+ + R D + SD L ++ P++ I
Sbjct: 61 VDGHHNYVERIRPDFVKIMSDGFFLYPSNVYR----------PKIASIQELTSIESIGEE 110
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
++ + + Q+I I +P + + + +N
Sbjct: 111 HPWIQQQVEVVQAIRET---FTEEIASFYNIFSPISYLKRWFRTETSRGDREVADLLLEN 167
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHAG--------VDVIQIFDTHAGCLGEHEFENYAARS 225
+LD ++ A I G IQ D + ++ Y S
Sbjct: 168 PEQLRSILDVIARDIAILTQKIIQQGGVDGIYLSTQEIQ--D---ERITPELYQTYIEPS 222
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-----SVPLSFALELQ 280
I+ A + + G + D A ++W V L+ EL
Sbjct: 223 NIAILEA-ANQVGGTNILHIC-GFEGASNDVTIFKDYPAQVVNWATHHEDVSLTQGQELF 280
Query: 281 KEGPVQGNLDP---MRLV-VGNQVMIDGVNAILDVLGSGP 316
V G + L + D +L G+
Sbjct: 281 PGKAVLGGFENGKKSLLYQGSKAELQDETRRLLAEAGNKG 320
>gi|33943598|gb|AAQ55477.1| hypothetical protein [Methanococcus voltae PS]
Length = 307
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 17/178 (9%)
Query: 71 AILFSDILVIADALGRNVRFVENE-GPRMDPI---TTQEIYLLNPNIDLFLNYLLPIFQS 126
L + A+A G ++ +N+ GPR+D + +E+ +D+ L+ +
Sbjct: 57 CRLPFCNTIEAEAFGAIIKLGDNKYGPRVDRYLINSNEELADFETILDIDLSMKKGRINN 116
Query: 127 ISILRKKL--PNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL 184
+ ++L ++ CG P+TV S ++ D +N LL+++
Sbjct: 117 VITATQELVNSGEYVILNICG-PFTVVSALM------DPKIFYKELRKNPENAQKLLNYI 169
Query: 185 SDVSAEYLIAQIHAGVDVIQIFDTHAGCL---GEHEFENYAARSVGRIISAVRRKYPN 239
+ Y++ +G +I D+ G L G F+ Y+ S RII +
Sbjct: 170 EEGIINYMVEGAKSGAKIISYSDS-VGTLDIVGPRIFKKYSGISNKRIIEQYKSTMEG 226
>gi|332983277|ref|YP_004464718.1| hypothetical protein Mahau_2768 [Mahella australiensis 50-1 BON]
gi|332700955|gb|AEE97896.1| hypothetical protein Mahau_2768 [Mahella australiensis 50-1 BON]
Length = 382
Score = 49.5 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 40/224 (17%)
Query: 143 FCG--APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAE-------YLI 193
FCG +T+A M + + + + LLD++++ YL
Sbjct: 174 FCGTDGIFTLACGM---RGMTNFLND---ILDDPDYAENLLDYITEAVIRRIKEIRLYLG 227
Query: 194 AQIHAGV-----DVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG 248
I + D I + L FE + RI + + ++ I
Sbjct: 228 EDIRSRHFGYADDAIVL-------LSPVLFEQLVLPRIKRIYDELTVE-DGSRSIHLCGD 279
Query: 249 AGYMLKNYRRLTDSNAIGLDWSVPLSFAL---ELQKEGPVQGNLDPMRLV---VGNQVMI 302
A + ++ N D P+ F EL + + G P ++ +
Sbjct: 280 AQRFFPILQ--SECNVKMFDTGYPIDFERLYDELSNDTEIWGG--PSVVLLKNGTPCAIK 335
Query: 303 DGVNAILDVL--GSGPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
D V IL + + F+ G+ I P +N+ + +
Sbjct: 336 DEVRRILGYVMPRTKKFVLRDGNAIIPGTPIENINAVYEACEEY 379
>gi|310828505|ref|YP_003960862.1| hypothetical protein ELI_2930 [Eubacterium limosum KIST612]
gi|308740239|gb|ADO37899.1| hypothetical protein ELI_2930 [Eubacterium limosum KIST612]
Length = 401
Score = 49.1 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 96/321 (29%), Gaps = 48/321 (14%)
Query: 57 ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLF 116
E ++ ++ D + + D + A +N F + P P+ + D
Sbjct: 87 EGYMKILQTDPVDGSTFYYDDFQVKWACPKNGFFYD---PVGHPLAEMKTIDEMEAFDWP 143
Query: 117 LNYLLPIFQSISIL-----RKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
Y I+ K L + G + ++ + + + +
Sbjct: 144 DPYDKTNINGQGIVGLGDKAKDLYENTDYALVVGGIFNGGTF-VPIEQLLGYEKFFKMLM 202
Query: 172 QNSRAFNWLLDF-----------LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFEN 220
+ +LLD L D +Y + + QI A + + +
Sbjct: 203 KKPDTVRYLLDKILTYEKAHWDMLLDEVGKYASVAVLSDDLGSQI----APIMRPSIYRD 258
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGA-GYMLKNYRRLTDSNAI--------GLDWSV 271
I++ ++ K + K + GA L + + +A G+D +
Sbjct: 259 VIKPYHKEIVNFIKSKCDHIKIVYHCDGAISEFLPDMLDI-GYDAWNPVQFSANGMDDTA 317
Query: 272 PLSFALELQKEGPV-------QGNLDPMRLVVGNQVMIDGVNAILDVLGSG-PFIFNLGH 323
++ E + QG + + + + V + L G + H
Sbjct: 318 AIN--REYGDKIAFWGGTCDAQG----VLSRGTVEEVKEDVKRRIKDLAPGSGLVLASVH 371
Query: 324 GITPQVDPKNVLDLVKTVRSE 344
I +V +N++ L +
Sbjct: 372 NIQREVPIENMVALYDSFYEY 392
>gi|222528854|ref|YP_002572736.1| uroporphyrinogen-III decarboxylase-like protein
[Caldicellulosiruptor bescii DSM 6725]
gi|222455701|gb|ACM59963.1| uroporphyrinogen-III decarboxylase-like protein
[Caldicellulosiruptor bescii DSM 6725]
Length = 361
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 72/243 (29%), Gaps = 18/243 (7%)
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG- 142
+G V E P ++P + + + + + + +L+ K
Sbjct: 95 MGSKVVISEGGTPWLEPAIESLDEMKSYIEKIEKIDVKKVV-TPELLKAKEDYEKATGKK 153
Query: 143 -----FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA--- 194
P T+A+ ++ + + + + L + EY+
Sbjct: 154 LKWGHMTRGPATIATSLLGTTSLC------ILLMDEPELMDEFFEILKEKLVEYIKNLRD 207
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
+ I I D + +E Y A + + + + ++ ++L
Sbjct: 208 YCEVEYNGIAINDDNCFLFSPKLYERYCAPILESLFKNFAPRKEDTRYQHSDSNMQHLLP 267
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV-VGNQVMIDGVNAILDVLG 313
L N++ + + + + G + P L + +I+ V + VL
Sbjct: 268 ILNDL-GVNSVNFGPEIHPATIRKFMPNALIYGQMPPFILRNGSAEEIIEYVKRDMQVLK 326
Query: 314 SGP 316
Sbjct: 327 DDG 329
>gi|154497151|ref|ZP_02035847.1| hypothetical protein BACCAP_01444 [Bacteroides capillosus ATCC
29799]
gi|150273550|gb|EDN00678.1| hypothetical protein BACCAP_01444 [Bacteroides capillosus ATCC
29799]
Length = 366
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 52/352 (14%), Positives = 117/352 (33%), Gaps = 56/352 (15%)
Query: 3 ERKQKILEVLQGNVINPPPIWLM-------RQAGRY-LPEYRQIRKKFKNFLDMC--YTP 52
+Q++L + G I+ PIWL+ A Y +P YR + + F D P
Sbjct: 4 TSRQRLLRLWNGQEIDRVPIWLLAPYHPLEYYADIYNIPAYRPVTAAIERFCDTMDRRRP 63
Query: 53 EYTV------ELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI 106
+ E+ I + L ++V TT +
Sbjct: 64 DLGFCYNANPEILRTSIDGPGRTGTRVTYRDLT----FEKSVTQENG-------YTTIKF 112
Query: 107 YLLNPNIDLFLNYLLPI-----FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
Y+ +PN+ + + I +++ +++L L+ G P ++ +
Sbjct: 113 YVDDPNMLEKIAEIPYIPPCPDRETLLREKEELGERGLLMMDLGDPLEPLYHL---CSAE 169
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH---AGVDVIQIFDTHAG--CLGEH 216
+ ++ + + D +++ E + A I + AG +
Sbjct: 170 NFC---IWTLTDLDSLLRFTDVMAERVLEVYRRYLELDIADAYFIVGAE-FAGPPMVDPK 225
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW----SVP 272
F ++R + R++ + +Y I + +L+ ++ + ++
Sbjct: 226 LFNTLSSRYLKRVVD-LIHQYGKIAIIHYHGNLSRVLEGFKEVEPDGLHTIEAPPVGDCT 284
Query: 273 LSFAL-ELQKEGPVQGNL---DPMRLVVGNQVMIDGVNAILDVLG-SGPFIF 319
++ A L + GN+ D R + V +++ +G FI
Sbjct: 285 ITQARSALGPHTVLIGNIQYDDLER--RSQDEIRQMVRDVMEEGKAAGRFIL 334
>gi|224026439|ref|ZP_03644805.1| hypothetical protein BACCOPRO_03195 [Bacteroides coprophilus DSM
18228]
gi|224019675|gb|EEF77673.1| hypothetical protein BACCOPRO_03195 [Bacteroides coprophilus DSM
18228]
Length = 359
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 62/380 (16%), Positives = 115/380 (30%), Gaps = 67/380 (17%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+ +++++ L + PP QA + PE+ ++ + P E +
Sbjct: 2 KHRERVIRALNHEETDRPPF----QA-TFTPEF------ADRLREVFHLPRQFSEPHHRD 50
Query: 63 IRRYNFD------------AAILFSDILVIADALGRNVR--FVENEGPR-MDPITTQEIY 107
Y + + V+ E P + T
Sbjct: 51 WYGYELEKLTGQDLLQASVGWSANYYLKQEPYTDEWGVKWKIDPYETPFGIGHYTNIARN 110
Query: 108 LLNPNIDLFLNYLLP------IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI- 160
L N +L + Y P +++++ L K+ + +IG + + +
Sbjct: 111 PLRDNDELAMAYKAPDPHRPELYKNVERLVKEYGDEYYIIG------RIHCTIFESAWAL 164
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEH 216
+ Y N N LLD E GVD+I + D +
Sbjct: 165 RGLDTLMTDFYINPDLTNHLLDETGGFHKEVAKKMAQIGVDMIWLGDDMGAQDSLMIDPE 224
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+ + + II V+ P+ K G Y + + D IGLD P+
Sbjct: 225 LWREFFKGRMADIIRTVKEIKPDIKVAYHTDGCNYDI-----IPDLIEIGLDVLNPIQ-- 277
Query: 277 LELQKEGPVQ---GNLDPMRLVVG-----------NQVMIDGVNAILDVLGS-GPFIFNL 321
E +Q G D + G + + + + +G G +I
Sbjct: 278 TECMNPEILQEKYG--DQLCFFGGVAVQSTLPMGTPEQIEKEYAWLKNSVGKGGGWICAP 335
Query: 322 GHGITPQVDPKNVLDLVKTV 341
H + +N L+KTV
Sbjct: 336 THHVQLDTPMENFFHLLKTV 355
>gi|11497633|ref|NP_068853.1| hypothetical protein AF0012 [Archaeoglobus fulgidus DSM 4304]
gi|2650648|gb|AAB91223.1| predicted coding region AF_0012 [Archaeoglobus fulgidus DSM 4304]
Length = 416
Score = 49.1 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 9/138 (6%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L + Y + ++ V F+ F L+ +G+
Sbjct: 279 LNPKLYNEYYWPYLNEVLHKV-ADMGQVNFVLFEGRHDAHLETLLEAPKKKVVGVFEKTD 337
Query: 273 LSFALELQKEGP--VQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLG--HGIT 326
E+ + V G P L+ Q + + + ++L+ G + G GI+
Sbjct: 338 PRKVREVLGDHVILVSG--PPNSLLIGGTPQKVEEYMKSLLEDCKEGGMMVYPGVDGGIS 395
Query: 327 PQVDPKNVLDLVKTVRSE 344
P+NV +++ V+
Sbjct: 396 RDARPENVKAVIEAVKKY 413
>gi|154501096|ref|ZP_02039134.1| hypothetical protein BACCAP_04784 [Bacteroides capillosus ATCC
29799]
gi|150269924|gb|EDM97452.1| hypothetical protein BACCAP_04784 [Bacteroides capillosus ATCC
29799]
Length = 358
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 26/185 (14%)
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRIISAV 233
+LD ++++S + AGVD++ + D + E + + + R+I A
Sbjct: 178 EAILDRVTEMSVQRAQLYAEAGVDILYLGDDVGMQQSLMMSEEMYVTWLKPRLKRVIDAA 237
Query: 234 RRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL--------ELQKEGPV 285
+ P+ I F GY+ L ++ G+D P+ +
Sbjct: 238 KAIKPD--IIVFYHSCGYVEPLIPHLIEA---GIDVLNPIQPECMDFGEIFEKYGDRVAF 292
Query: 286 QGNLDPMRL--VVGNQVMIDGVNAILDVLGSGPFIF----NLGHGITPQVDPKNVLDLVK 339
G + R+ + + V LD+ G +F H + P+V +N+ V+
Sbjct: 293 HGTVGTQRVMPFGTPEEVKAVVGKHLDIAGPKGGLFVAPT---HLLEPEVPWENIRAYVE 349
Query: 340 TVRSE 344
Sbjct: 350 ACSEY 354
>gi|302391721|ref|YP_003827541.1| uroporphyrinogen-III decarboxylase [Acetohalobium arabaticum DSM
5501]
gi|302203798|gb|ADL12476.1| Uroporphyrinogen-III decarboxylase [Acetohalobium arabaticum DSM
5501]
Length = 389
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 71/266 (26%), Gaps = 28/266 (10%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI 155
P +P+ + + I + K++ P Y+
Sbjct: 122 PVGNPLKDCTVEDIENYPWPDPKDPSRIA-GLKKEAKRIYEETDYCLVLSGPLGGGIYVP 180
Query: 156 SGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDV-----------SAEYLIAQIHAGVDVIQ 204
FI LL+ + D EYL + + Q
Sbjct: 181 CTWFIGYQEFFMKLVM-EPEIVEALLEKIVDFHLGWWEMVLEEIGEYLQVVVLSDDLGTQ 239
Query: 205 IFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGA-GYMLKNYRRLT--D 261
A + + + +++S ++ K + K + GA + + +
Sbjct: 240 E----APLMRPSMYREQIKPAQEKVVSFIKSKA-DVKVVYHCDGAVSEFIPDMIDIGFDA 294
Query: 262 SNAIGLDWSVPLSFAL---ELQKEGPVQGNL-DPMRLV--VGNQVMIDGVN-AILDVLGS 314
N + + A E E G D + + + V + D+
Sbjct: 295 LNPVQVSAEGMGDTARLKEEFGDEISFWGATCDSQNTLSKGTPEEIRQEVKQRVNDLAAG 354
Query: 315 GPFIFNLGHGITPQVDPKNVLDLVKT 340
G + H I V P+N++
Sbjct: 355 GGLVLASIHNIQKDVPPENIVAFYDA 380
>gi|83589254|ref|YP_429263.1| hypothetical protein Moth_0386 [Moorella thermoacetica ATCC 39073]
gi|83572168|gb|ABC18720.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 389
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 8/139 (5%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSV 271
L +E + S+ +I + + + FA+G L+ L D + + + +
Sbjct: 253 LSMEHWEKFYWPSLKAVIEGLWAQ--GKRMYFFAEGNWTPYLEKIAELPDKSIVFIIDTT 310
Query: 272 PLSFALE-LQKEGPVQGNLDPMRL--VVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITP 327
A E L + + G + P L + D V +D L G F+ G +
Sbjct: 311 DAKKAKEILGGKFCLWGGV-PTTLLTYGTPAQVKDCVKQAIDELACDGGFVLAPGGAVMS 369
Query: 328 QVDPKNVLDLVKTVRSEKI 346
+N+ +++ R +
Sbjct: 370 DAKRENIFAMIEAGREYGV 388
>gi|189466612|ref|ZP_03015397.1| hypothetical protein BACINT_02987 [Bacteroides intestinalis DSM
17393]
gi|189434876|gb|EDV03861.1| hypothetical protein BACINT_02987 [Bacteroides intestinalis DSM
17393]
Length = 354
Score = 48.7 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 80/271 (29%), Gaps = 29/271 (10%)
Query: 86 RNVRFVENEG-PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFC 144
++F + G R++ E+ P+ ++ P + I + + ++
Sbjct: 93 VKIQFEQGYGRIRIEKPEDWELIKPLPS-----DFFTPTLEIIKYIYDIAGANAMILPTV 147
Query: 145 GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQ 204
+P + + +A L++ + Y+ A GVD
Sbjct: 148 YSPLQMLIQSVGD------KTVIAYAKTEPERVKKALEYFTKALIGYVKACKKIGVDGFY 201
Query: 205 IFDTHAGCLG----EHEFENYAARSVGRIISAV-RRKYPNAKFISFAKGAGYMLKNYRRL 259
T G + FE + R++ + N I +G L +
Sbjct: 202 T-PTQGGEIKFYEVPGFFETFVKPYDIRVMQECNTQTQFNILHICDYEGKYDDLTRFVSY 260
Query: 260 TD----SNAIGLDWSVPLSFALELQKEGPVQGNL--DPMRLVVGNQVMIDGVNAILDVLG 313
+ D L A E + P G L L + + + + L
Sbjct: 261 PGQIINAPCEVADQPFSLQ-ACEQLFKRPAMGGLYRKGAILKGSSDEIAKEIYELKKTLK 319
Query: 314 SGPFIFNLG--HGITPQVDPKNVLDLVKTVR 342
FI LG I PQ N+ +KT
Sbjct: 320 GKRFI--LGADCTILPQTPMDNIRTAIKTSH 348
>gi|169838754|ref|ZP_02871942.1| uroporphyrinogen decarboxylase [candidate division TM7 single-cell
isolate TM7a]
Length = 51
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT 260
E + + + RI+ AV+ ++P I F KG G L +R ++
Sbjct: 2 ESAYLEFGWAYILRIVDAVKAEFPQIPVIVFPKGVGASLDKFREIS 47
>gi|325265465|ref|ZP_08132188.1| putative methyltransferase [Clostridium sp. D5]
gi|324029323|gb|EGB90615.1| putative methyltransferase [Clostridium sp. D5]
Length = 367
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 74/248 (29%), Gaps = 57/248 (22%)
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
++++ + + IG+ G P+ V M + ++ +L+
Sbjct: 141 YEAVKRFCDQHQDKAIRIGWPG-PYQVFLEMYPAESF------YMLMAEDPEMVKTMLNR 193
Query: 184 LSDVSAEYLIAQIHAGVDVIQIF---DTHAGCL----GEHEFENYAAR------------ 224
S+ E AG I + D + + ++ Y A
Sbjct: 194 YSEFYLELYERMFEAGGGAIDLIRPCDDYGTQISLLFSPEMWDEYFAENTKKLVNLAHKY 253
Query: 225 ---SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQK 281
+ AVR+ PN I+ L+ +++ L E
Sbjct: 254 GCYYLQHSCGAVRQIIPN--LIACGVDG---LEPIQKVKGMEVDDLK--------REFGD 300
Query: 282 EGPVQGNLDPMRL--VVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITP------QVDPK 332
+ QG +D L + + I+ + G +I LG P V +
Sbjct: 301 KLCFQGGVDTQNLLPFGTPEEVRAETEYIIRTMNVDGGYI--LG----PSQDFEGDVPVE 354
Query: 333 NVLDLVKT 340
N++ L +
Sbjct: 355 NIIALYEA 362
>gi|326803174|ref|YP_004320992.1| hypothetical protein HMPREF9243_0671 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650458|gb|AEA00641.1| conserved hypothetical protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 317
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 16/219 (7%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMD----PI 101
++ P+ + T R+++ D S+ + + G ++ F +G PI
Sbjct: 19 EIDREPQTISQATYDFARQFDLDFIKTMSNGMYTVEDYGVDLDFSAIAKGGVAQVKATPI 78
Query: 102 TTQEIYLLNPN--IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
+ + + P+ +D + + + L + I L+ +P T A+ + G
Sbjct: 79 HSYQDWREVPDLTVDQAPAFQRE-LEHLERLVELTKGEIPLVVTVHSPLTTANKLCQGQI 137
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHE 217
+ L+ L+ + E++ + G D I + A L
Sbjct: 138 DQY------MEADGEGYLIQALERLTRPTIEFVQLALSKGADGIYLASQMASHDKLRTQA 191
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
++ Y +II A + N I A +LK+Y
Sbjct: 192 YQKYGIPFDLKIIEAAESGWLNTLHIHGANIMFDLLKDY 230
>gi|298384259|ref|ZP_06993819.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
gi|298262538|gb|EFI05402.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
Length = 344
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 88/261 (33%), Gaps = 24/261 (9%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI 155
PR++ I T + + P + P I L ++L ++ +P ++ +
Sbjct: 94 PRLE-IKTPDDWKKVPVYGE--EFFEPQLAVIEDLARELKGEALVLPTVYSPVSLLHQTV 150
Query: 156 SGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCL-- 213
GF+ ++ A L+ ++ YL A G D + + G
Sbjct: 151 GDGFV-------ELVKKDPEAVRPALENITLSIENYLRAARRRGADGFYVS-SQGGDTKT 202
Query: 214 --GEHEFENYAARSVGRIISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTDSNA---IGL 267
F+N R+ P N I + + +Y S I L
Sbjct: 203 FGTTPIFKNVIRPYDKRVSEVANEIAPFNILHICDYGSSYVSIDDYADYPASIINPPIHL 262
Query: 268 DW-SVPLSFALELQKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVLGSGPFIFNLGHG 324
+ SV L E+ K PV G LD + ++V + V+ +++ FI
Sbjct: 263 ENGSVDLKHVQEVFKR-PVFGGLDRLGVLVTGTLEEAKKEVDKVMENA-PANFILGADCT 320
Query: 325 ITPQVDPKNVLDLVKTVRSEK 345
+ D + ++ V S +
Sbjct: 321 VPSDTDYDRLRAIIDYVHSWR 341
>gi|325261579|ref|ZP_08128317.1| hypothetical protein HMPREF0240_00553 [Clostridium sp. D5]
gi|324033033|gb|EGB94310.1| hypothetical protein HMPREF0240_00553 [Clostridium sp. D5]
Length = 375
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 32/193 (16%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA---GCL-GEHEFENYAARSV 226
Y+N + D L ++ GVD+I++ D A G L + +
Sbjct: 189 YENEEVALAICDKLEELRIRQAKKYAELGVDIIRLGDDVATQKGPLMSREMYGALIKERM 248
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS--------FALE 278
RI+ A + P + + +++ D G+D P+
Sbjct: 249 KRIVQAGKAVNPEV---LYFRHCDGKVEDIVD--DFVEEGIDILNPVQPECNDLTLIYDR 303
Query: 279 LQKEGPVQGNL--DPMRLVVGNQVMIDGVNAILDVLGSGP-------FIFNLGHGITPQV 329
G + + + + V + +LG I P+V
Sbjct: 304 FGDRLAFWGGIGTQSTMPFGTPEEVREKVKEVQKILGKRGALVVAPTHIL------EPEV 357
Query: 330 DPKNVLDLVKTVR 342
+NVL V +
Sbjct: 358 PWENVLAFVDAAK 370
>gi|325264912|ref|ZP_08131640.1| hypothetical protein HMPREF0240_03926 [Clostridium sp. D5]
gi|324029901|gb|EGB91188.1| hypothetical protein HMPREF0240_03926 [Clostridium sp. D5]
Length = 373
Score = 48.3 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 26/191 (13%)
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH-------AGCLGEHEFENYAARS 225
+ N LLD ++ + + +QI +T + FE
Sbjct: 183 DKEFANKLLDKTLEIQMGLYDVLLSECGEYLQIVETADDYGTQKGPIMSPELFEEMILPR 242
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-----GLDWSVPLSFALELQ 280
++ ++ K P K G+ Y L + + + + D E
Sbjct: 243 RKKLNDFIKSKAPQVKIFHHTCGSVYRLLDGLIESGVDILNPVQPSADDMDTYRLQEEFG 302
Query: 281 KEGPVQGNLD-PMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITP------QVDPK 332
G++D L+ + D + L+ LG G +I + P + +
Sbjct: 303 DRLIFHGSIDEQTALIFSGDRVQDEMKTRLESLGKEGGYI------MAPTSNFQDDMPME 356
Query: 333 NVLDLVKTVRS 343
N++ + +
Sbjct: 357 NIIKFAEWAKE 367
>gi|292670515|ref|ZP_06603941.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647925|gb|EFF65897.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 334
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 47/342 (13%), Positives = 96/342 (28%), Gaps = 39/342 (11%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQP 62
+K+ +L + + P + + T
Sbjct: 4 SKKELVLNAMDRKEVERVP--------------------SGFWFHFLKDETHADAFTHPE 43
Query: 63 IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFLNYLL 121
+ + + I + D + F P + TT E+ + P D ++
Sbjct: 44 LEKQLLEGEIRYIDEVQPDFVKIMTDGFFAYRNPAIQKATTAAELAKIQPLSDDDPYFVR 103
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ + L ++ + I + T+ ++ G ++ ++ A
Sbjct: 104 QVAYA-KELTRRYGSDIAMFYNLFCAGTILKFVRPGTISENEKFLAQLIQEDKAAVRAAF 162
Query: 182 DFLSDVSAEYLIAQIHAGVDVIQIFDT---HAGCLGEHEFENYAARSVGRIISAVRRKYP 238
D +S A+ I G F + AG ++ A I+ A +
Sbjct: 163 DVISADIAKLAERIIKEGGATGVYF-SLQNLAGSADRALYDEVFAPGEKEILRA--ANHA 219
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEGPVQ---GNLD 290
+A I G D A ++W+ VPL ++ + + GNL
Sbjct: 220 SAYNILHICGYLGHRNELDWYKDYEAKTINWAAVVEGVPLEEGKKIFPQHALLGGFGNL- 278
Query: 291 PMRLVVGN--QVMIDGVNAILDVLGSGPFIFNLGHGITPQVD 330
P ++ + IL G I + D
Sbjct: 279 PNDVLCSGTRAEVEAETRRILAAAGRTGVILGADCTVPSDTD 320
>gi|301060776|ref|ZP_07201591.1| pterin binding enzyme [delta proteobacterium NaphS2]
gi|300445173|gb|EFK09123.1| pterin binding enzyme [delta proteobacterium NaphS2]
Length = 875
Score = 47.9 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 88/299 (29%), Gaps = 47/299 (15%)
Query: 71 AILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISIL 130
++ I+++ G + + ++ P P+ E ++ + N P+ I +
Sbjct: 66 PLITFGIVMLPSIFGCEIIYKDDALPWAMPLNLSEDEIMKLELPDIFN-TYPMTDMIRQI 124
Query: 131 R--KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVS 188
+ K+ + +A + D ++N LL+ ++
Sbjct: 125 KYLKEKYGRVVGDINTTGVQNLALKIRGDQLYFDF-------FENPELCRHLLNICTESI 177
Query: 189 AEYLIAQIHAGVDVIQ-----------IF-DTHAGCLGEHEFENYAARSVGRIISAVRRK 236
+ +F + A + +E+ R+ A
Sbjct: 178 IQLFRFNHETTGTAAMDVTPMCDPKLYVFPNCTAEQISLETYESNILAYDNRVAEACHPV 237
Query: 237 YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQGN--LDPMR 293
I + +L+ Y ++ I + + + E+ + V N + P+
Sbjct: 238 G-----IHYCGSVDEVLEGYAKVRHLAFIEIGFGSDVKRTREVFGPDVAV--NARISPVL 290
Query: 294 L-VVGNQVMIDGVNAILDVLGSGPFIFNLGH-------GITPQVDPKNVLDLVKTVRSE 344
+ + + V ++D H G+T +NV +KT
Sbjct: 291 MKNGKPEAVASEVRRLIDNGAPL-------HNFSIDTVGLTYGTPDENVRTALKTAAEY 342
>gi|312622857|ref|YP_004024470.1| uroporphyrinogen-iii decarboxylase-like protein
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203324|gb|ADQ46651.1| uroporphyrinogen-III decarboxylase-like protein
[Caldicellulosiruptor kronotskyensis 2002]
Length = 361
Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 73/243 (30%), Gaps = 18/243 (7%)
Query: 84 LGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIG- 142
+G V E P ++P + + + + + + +L+ K
Sbjct: 95 MGSKVVISEGGTPWLEPAVESLDEVKSFIEKMERIDVKKVI-TPELLKAKEDYEKATGKK 153
Query: 143 -----FCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY---LIA 194
P T+A+ ++ + + + + L + EY L
Sbjct: 154 LKWGHMTRGPATIATSLL---GTTNLC---ILLMDEPELMDIFFEILKEKLVEYIKNLRG 207
Query: 195 QIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
+ D I I D + +E Y A + + + + ++ ++L
Sbjct: 208 YCNVEYDGIAINDDNCFLFSPKLYERYCAPILESLFKNFAPRKEDTRYQHSDSNMQHLLP 267
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRLV-VGNQVMIDGVNAILDVLG 313
L N++ + + + + G + P L + +I+ V + VL
Sbjct: 268 ILNDL-GVNSVNFGPEIHPATIRKFMPNALIYGQMPPFILRNGSAEEIIEYVKRDMQVLK 326
Query: 314 SGP 316
Sbjct: 327 DDG 329
>gi|332982322|ref|YP_004463763.1| hypothetical protein Mahau_1760 [Mahella australiensis 50-1 BON]
gi|332700000|gb|AEE96941.1| hypothetical protein Mahau_1760 [Mahella australiensis 50-1 BON]
Length = 315
Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 18/181 (9%)
Query: 151 ASYMIS-GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI---- 205
A+Y I G + D + + D E + G D +
Sbjct: 113 ATYAIPDGDTMLDFVYA---LNDHPDEMKERAAKMVDDQLERCRKLMDGGFDGFALCSDY 169
Query: 206 -FDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
F+ L F + + R+I R+ A I G + + +A
Sbjct: 170 AFNR-GSFLSPSMFREFITPYLARLIDGQRKM--GAYVIKHTDGDIMPIIDQIVECGPHA 226
Query: 265 I-GLDWSVPLSFA---LELQKEGPVQGNLDPMRLVVG--NQVMIDGVNAILDVLGSGPFI 318
+ LD + A + + GN++ + G +++ A+ G +I
Sbjct: 227 LHSLDPQGGIDIAVIKKMYGDKVCLIGNVNCALMQTGTKEEILASAAYAMEHGKPGGGYI 286
Query: 319 F 319
F
Sbjct: 287 F 287
>gi|20089743|ref|NP_615818.1| hypothetical protein MA0859 [Methanosarcina acetivorans C2A]
gi|19914678|gb|AAM04298.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
C2A]
Length = 640
Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 41/365 (11%), Positives = 111/365 (30%), Gaps = 43/365 (11%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFK-NFLDMCYTPEYTVELTLQPIR 64
+ + + ++ P++ + G +RK + + + V+ +
Sbjct: 281 DRTISAMSDKKVDHLPVYPL-ACG-------VLRKFVPVTYKEYATNEDAFVQSAYLGSK 332
Query: 65 RYNFDAAILFSDILVIADALGRNVRFVENEGPRMD-PITTQEIYLLNPNIDLFLNY--LL 121
+ D + D+ + G +++ E++ P + I E + + Y ++
Sbjct: 333 YLDLDMFVGLIDLSATSADFGCKIKYPEDDTPSSEGHIKDYEKIEVPELKEGTRGYELVM 392
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
++ L K+L + +GF P + ++ + + +
Sbjct: 393 ASKKAKEKLNKEL--NTPFVGFHEGPLLTLTQLMGADRVLMDMKT------QPDVVLEAV 444
Query: 182 DFLSDVSAEYLIAQIHAGV-DVIQIFDTHAG--CLGEHEFENYAARSVGRIISAVRRKYP 238
+D + + D + I + + + E ++ + + V + ++Y
Sbjct: 445 QKCTDYVCQLSELFFNEDACDALCIDNLWSNNVIMSEQDYWKFDGKFVYDQQIPIFKQYN 504
Query: 239 NAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL--------QKEGPVQGNLD 290
I A + R+ + + + + G ++
Sbjct: 505 QPYIIHNCADAVHFETQIRKFGTALYSYAYYEKSRDKGSQNYADLIPKYGDMCCMMGEVN 564
Query: 291 PMRLVVGNQVMIDGVNA-----------ILDVLG-SGPFIFNLGHGITPQVDPKNVLDLV 338
P+ + G+ + V +L G +I + G I P V +V
Sbjct: 565 PVEFMDGSAAGVQKVKDDTKNLLENVLPVLKENGLQSKYILSSGCEIPPGGPLTTVQAMV 624
Query: 339 KTVRS 343
V+
Sbjct: 625 NVVKE 629
>gi|89893789|ref|YP_517276.1| hypothetical protein DSY1043 [Desulfitobacterium hafniense Y51]
gi|219668162|ref|YP_002458597.1| uroporphyrinogen-III decarboxylase [Desulfitobacterium hafniense
DCB-2]
gi|89333237|dbj|BAE82832.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538422|gb|ACL20161.1| Uroporphyrinogen-III decarboxylase-like protein [Desulfitobacterium
hafniense DCB-2]
Length = 327
Score = 47.5 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 46/158 (29%), Gaps = 11/158 (6%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGV-DVIQIFDTHAGC----LGEHEFENYAARS 225
Y+ A + L+D+L++ Y I D + D L F+ + +
Sbjct: 140 YEEPEAMHELIDYLTEFELAYAKTVIEKIHPDALFHHDDWGSQINSFLSPEMFKKFFLPA 199
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG--LDWSVPLSFALELQKEG 283
+I + + + L + + + + + ++
Sbjct: 200 YKKIYGFYKANGVEL-IVHHSDSYAANLVPFMIEMGVDIWQGVMTTNNTPELIEKYGEKI 258
Query: 284 PVQGNLDPMRLVVG---NQVMIDGVNAILDVLGSGPFI 318
G++D L + + + V G FI
Sbjct: 259 TFMGDIDSGYLDLPDWQPERCAEAVERACRRCGKHYFI 296
>gi|404563|gb|AAB27814.1| uroporphyrinogen decarboxylase {N-terminal} {EC 4.1.1.37}
[Rhodobacter sphaeroides, Peptide Partial, 27 aa]
Length = 27
Score = 47.1 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 7 KILEVLQGNVINPPPIWLMRQAGRYLP 33
+L L+G + P IWLMRQAG YLP
Sbjct: 1 TMLRALKGETLPTPSIWLMRQAGPYLP 27
>gi|154150583|ref|YP_001404201.1| hypothetical protein Mboo_1040 [Candidatus Methanoregula boonei
6A8]
gi|153999135|gb|ABS55558.1| conserved hypothetical protein [Methanoregula boonei 6A8]
Length = 418
Score = 47.1 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 9/138 (6%)
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVP 272
L ++ + S+ +++ V +I F L+ L + +
Sbjct: 281 LNPKQYNEFYWPSLKKVLLEVIN-MGQTPYILFEGRHDAHLETLLDLPKGKIVAVFDKTD 339
Query: 273 LSFALELQKEGPV--QGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLG--HGIT 326
E+ + V G P L+ Q + D + ++LD G + G GI+
Sbjct: 340 PRKVREVLDDHVVLVSG--PPNSLLIGGTPQKVDDYMKSMLDDCKQGGMMIYPGADGGIS 397
Query: 327 PQVDPKNVLDLVKTVRSE 344
+ P+NV +++ V+
Sbjct: 398 GEARPENVRAVLEAVKKY 415
>gi|332798303|ref|YP_004459802.1| hypothetical protein TepRe1_0292 [Tepidanaerobacter sp. Re1]
gi|332696038|gb|AEE90495.1| hypothetical protein TepRe1_0292 [Tepidanaerobacter sp. Re1]
Length = 409
Score = 47.1 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 19/183 (10%)
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRI 229
+ + L D Y ++ G D++ I L ++ + ++ +
Sbjct: 231 IRRYPDKVKKAAEALVDPIVNYGLSYKKMGFDLVMIPLHLNEYLSPKLYKEFYWPTLKEV 290
Query: 230 ISAVRRKYPNAKFISFAKGAGY-MLKNYRRLTDSNAIGLDWSVPLSFALEL-QKEGPVQG 287
I + ++ + F +G L+ L + A E+ Q V G
Sbjct: 291 ILRLGKE--GIRSWVFFEGHHEQHLETILELPKGWGAAYFEKTDVVKAKEVLQGHTCVVG 348
Query: 288 NLDPMRLV--VGNQVMIDGVNAILDVLGSGPF------IFNLGHGITP-QVDPKNVLDLV 338
+ P+ L+ + + + ++L+ + G I G P +N+ L+
Sbjct: 349 GI-PISLIVTGTPAKIDEYIKSLLEQVKPGGGFMLSTSI-----GSAPADTPLENITALI 402
Query: 339 KTV 341
+ V
Sbjct: 403 EAV 405
>gi|221633555|ref|YP_002522781.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
gi|221156369|gb|ACM05496.1| uroporphyrinogen decarboxylase [Thermomicrobium roseum DSM 5159]
Length = 335
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 44/203 (21%)
Query: 2 NERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYT--VE 57
+E ++I + G ++ PP+ W R+ PE +
Sbjct: 5 SEHWERIEAAIAGESVDHPPVSLW------RHFPE---------------EDQDAATLAR 43
Query: 58 LTLQPIRRYNFDAA--ILFSDILVIADALGRNVRFVEN------EGPRMDPITTQEIYLL 109
+TL RR+ FD + D VIA R + P P I L
Sbjct: 44 VTLAWQRRFAFDFVKLMPPGDYPVIAWGGASEYRGSPSGTRTVTRYPVEQPADWPTIRPL 103
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ L + ++ ++ ++L + ++ +P TVA + +G + D
Sbjct: 104 ----PVDLGPFRTVNEAARLVARELGGAVPVLQTVFSPLTVAYKLSAGRVLHDL------ 153
Query: 170 AYQNSRAFNWLLDFLSDVSAEYL 192
++ L +++ +
Sbjct: 154 -VEHPALVEEALAAITETMRALV 175
>gi|239628503|ref|ZP_04671534.1| uroporphyrinogen decarboxylase [Clostridiales bacterium 1_7_47_FAA]
gi|239518649|gb|EEQ58515.1| uroporphyrinogen decarboxylase [Clostridiales bacterium 1_7_47FAA]
Length = 328
Score = 46.8 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 81/271 (29%), Gaps = 51/271 (18%)
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
I++ E Y + + Q + + + I +P T + +
Sbjct: 77 ISSIEDYRYIEPLPAIYGTWGKVLQLSQWMERLVKPGTPYIQTIFSPATTLKKLAGNRML 136
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHE 217
+D +N + LD ++ + ++ A I AGV F + +G+
Sbjct: 137 QDML-------ENPDLVHQALDAITQTTINFVKANIEAGVSGF-FFASQCASYDLMGDTM 188
Query: 218 FENYAARSVGRIISAVRRKYPNAKF--ISFAKGAGYMLKNYRRLTDSNAIGLDWSV---- 271
F + R+I++ Y + + + G+ R N L+W
Sbjct: 189 FAEFCKPYDLRVINS----YKDVTWFNVLHVHGSNIRFDEMSRYP-CNV--LNWHDRQNG 241
Query: 272 -PLSFALELQKEGPVQGNLDPMRLVVGNQV--------------------MIDGVNAILD 310
L A + + G L G + + + +D
Sbjct: 242 PSLKEARAKCSKAFLGG------LYEGPAIVGSSLEYDSIMSRPGTTPDMIKKHIREAID 295
Query: 311 VLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
++ + G P+ +N+ + + V
Sbjct: 296 MVDGKGLLVGPGCVADPRSPEENLRAVREAV 326
>gi|89896491|ref|YP_519978.1| hypothetical protein DSY3745 [Desulfitobacterium hafniense Y51]
gi|219667654|ref|YP_002458089.1| hypothetical protein Dhaf_1604 [Desulfitobacterium hafniense DCB-2]
gi|89335939|dbj|BAE85534.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537914|gb|ACL19653.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
Length = 414
Score = 46.8 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
+ +++ + S+ +++ + + L+ R + + V +
Sbjct: 279 SDEQYKTFYWPSLRKLLMGLID-AGLTPMVYGEGSMNTRLEVLRDVPKGKVLYHFEHVDM 337
Query: 274 SFALELQKEGP-VQGNLDPMRLVVG-NQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVD 330
A E+ + + GN+ L G Q + D ++DV G G F+ + G I +
Sbjct: 338 FRAKEILGDVACISGNVPNSLLYFGTPQEVKDYCKKLIDVCGKDGGFMMDSGALID-EAK 396
Query: 331 PKNVLDLVKTVRSEKI 346
P+NV + + + +
Sbjct: 397 PENVKAMFEFTKEYGV 412
>gi|325265472|ref|ZP_08132195.1| putative methyltransferase [Clostridium sp. D5]
gi|324029330|gb|EGB90622.1| putative methyltransferase [Clostridium sp. D5]
Length = 345
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 44/146 (30%), Gaps = 21/146 (14%)
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW 269
L + R++ K I + G ++ L + G+D
Sbjct: 205 GLMLSPDMVRKFIIPGCKRLVEQAHSY--GVKVIYHS--CGSIIDVIPDLIGA---GVDI 257
Query: 270 SVPLSFAL----------ELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPF 317
P+ + + G +D L+ + + + V + ++
Sbjct: 258 VHPIQALAAGMEPRGLKEKFGDQVAFCGGVDTQDLLVNGSPEDVRNKVKELREIF-PTGL 316
Query: 318 IFNLGHG-ITPQVDPKNVLDLVKTVR 342
I + H I P V P N+ L + +
Sbjct: 317 IISPSHEAIMPDVPPANIHALFEEAQ 342
>gi|332981310|ref|YP_004462751.1| hypothetical protein Mahau_0728 [Mahella australiensis 50-1 BON]
gi|332698988|gb|AEE95929.1| hypothetical protein Mahau_0728 [Mahella australiensis 50-1 BON]
Length = 391
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 57/356 (16%), Positives = 114/356 (32%), Gaps = 61/356 (17%)
Query: 3 ERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDM-CYTPEY-TVELTL 60
++++ + G I+ PIWL L Y ++ + + D+ CY P ++
Sbjct: 25 SSRERLTRLFNGQDIDRIPIWL-------LAPYHRL-GCYADIYDLECYKPIVDAIDKYC 76
Query: 61 QPIRRYNFDAAILFS---------------------DILVIADALGRNVRFVENEGPRMD 99
R F+ ++ DIL D +G ++
Sbjct: 77 DTFDRRGFNMGFCYNGNPEIKWEHSEEDNAGNHIIKDILRYKDMSLMKYVSTGKDGTKVK 136
Query: 100 PITTQEIYLLNPNIDLFLNYLLPIFQSISILR--KKLPNHITLIGFCGAPWTVASYMISG 157
P+ ++ L +D + Y+ P R ++L + ++ G P ++
Sbjct: 137 PLIE-DVDELKKIVD--IPYVPPSPDVSKFFREQEELGDKGLMMVDIGDP------LMPL 187
Query: 158 GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIH--AGVDVIQIFDTHAG--CL 213
+ ++ + LD + D + G + AG +
Sbjct: 188 YNLTSAENFSLWTATDYDKILSFLDAIYDRVLYAYKYLLDRNVGDVFFIVGAEFAGPPLV 247
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW---- 269
+F + + R V I+ +R K I G + K + + N GL
Sbjct: 248 SPTKFRDLSVRYVKGIVDLIRGY--GKKSIVHYHGN--LYKVLAGMKEINPDGLHTIEAP 303
Query: 270 ---SVPLSFALE-LQKEGPVQGNL--DPMRLVVGNQVMIDGVNAILDVLGSGPFIF 319
++ A E L K+ + GN+ D + + + + SG FI
Sbjct: 304 PIGDCTITQAREALGKDMVLIGNIQYD-DLVRKDKDEIEQMIKDAIGEGKSGRFIL 358
>gi|296111383|ref|YP_003621765.1| hypothetical protein LKI_06280 [Leuconostoc kimchii IMSNU 11154]
gi|295832915|gb|ADG40796.1| hypothetical protein LKI_06280 [Leuconostoc kimchii IMSNU 11154]
Length = 334
Score = 46.0 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 78/262 (29%), Gaps = 24/262 (9%)
Query: 99 DPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGG 158
+P ++ + D ++LL + RK + N +P T+ + +
Sbjct: 74 NPKNIDDLKKIQVIADDD-DWLLRQVDLVKAQRKVIGNRKAFYNIF-SPVTLLKWALFDS 131
Query: 159 F----IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-GVDVIQIFDTHAGCL 213
+ + F +L+ ++ + + A ++A G D + L
Sbjct: 132 SQELPKQGDERLTQFFIDYPDDITHILEVIAQGVIKQIKAVVNAGGADGVYY---STQEL 188
Query: 214 GEHEFENYAARSVGRIIS----AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW 269
+ + + I AV + + G + TD + ++W
Sbjct: 189 QSDHYNRDLFDHIQKKIDLSIIAVINAVSDVNILHIC-GYSETKNHLSWFTDYDLPIVNW 247
Query: 270 -----SVPLSFALELQKEGPVQ---GNLDPMRLV-VGNQVMIDGVNAILDVLGSGPFIFN 320
V L + K+ V GN L + + V +L + + I
Sbjct: 248 AVKIEDVSLREGQAIFKDKIVLGGFGNNTQAILYRGSREEIEAEVTNVLTDVDTSRVIIG 307
Query: 321 LGHGITPQVDPKNVLDLVKTVR 342
+ + ++ + V
Sbjct: 308 ADCTVPRDISIDHLKWAIAAVH 329
>gi|182414701|ref|YP_001819767.1| uroporphyrinogen-III decarboxylase-like protein [Opitutus terrae
PB90-1]
gi|177841915|gb|ACB76167.1| Uroporphyrinogen-III decarboxylase-like protein [Opitutus terrae
PB90-1]
Length = 361
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 36/223 (16%), Positives = 67/223 (30%), Gaps = 34/223 (15%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFL----SDVSAEYLIAQIHAG 199
PW S+ ++ Q + ++ LD + +++ Y G
Sbjct: 148 VIGPWV--SFFEIYCQLRGLEQAMMDLVESPEYVEATLDRIEAIQTEMMKRYFTR--ARG 203
Query: 200 V-DVIQIFDTHAGC----LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLK 254
D++ + D AG + + + + R + F G
Sbjct: 204 CLDLVFVSDDIAGQRSLLISPAMWRQHLEPRLKRWCDLIHAHGLKV----FYHTDGAARP 259
Query: 255 NYRRLTDSNAIGLDWSVPLSFA----------LELQKEGPVQGNLDPMRLV--VGNQVMI 302
+ D G+D P+ A E G +D ++ +
Sbjct: 260 LIGPILDC---GVDVLNPIQHACPGMDLAELKKEFGHRVIFHGAVDNQTVLPRGTADEVR 316
Query: 303 DGVNAILDVLGSG--PFIFNLGHGITPQVDPKNVLDLVKTVRS 343
V L LG+G FI H +N+L +V+TV +
Sbjct: 317 AEVRECLRTLGAGREGFICCSCHNTQAGTPVENILAMVETVHA 359
>gi|300087951|ref|YP_003758473.1| uroporphyrinogen decarboxylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527684|gb|ADJ26152.1| uroporphyrinogen decarboxylase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 325
Score = 46.0 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 31/228 (13%), Positives = 70/228 (30%), Gaps = 23/228 (10%)
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
+++ + + P +ASY+ + N L
Sbjct: 110 LRAVEQVIADKDKDTPFVITIFNPLAMASYLAGD------ELLLAHLREYPDKVNAALAA 163
Query: 184 LSDVSAEYLIAQIHAGVDVIQI---FDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
L++ + ++ A G+D + F ++ + E+ +Y + I+ +
Sbjct: 164 LTETTELFISACFDRGIDGVFFSTRFASY-ELMSAVEYLDYGQKWDLEILKNSAKG--GW 220
Query: 241 KFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQKEGPVQGNLDPMRLV 295
I G M +L + ++W L A ++ G + G ++ R +
Sbjct: 221 FNILHLHGQHPM---MSQLAEYPVQAVNWHDRTSDTDLGRAAQVFP-GVLMGGIEQQRFL 276
Query: 296 --VGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
+ +D++G I G V N+ + V
Sbjct: 277 VNGSPADVNRQAVESIDIMGGNRLILAPGCTFPLSVPEANLRAVRNAV 324
>gi|307267097|ref|ZP_07548609.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917886|gb|EFN48148.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 370
Score = 45.6 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 21/151 (13%)
Query: 208 THAGCL-GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKG-AGYMLKNYRRLTDSNAI 265
+ AG L F Y +I+ V+ PN ++ + G + + + I
Sbjct: 224 SQAGPLISVDLFNKYFKPWYKKIVELVKGMSPNVYVLAHSDGFITPFIPEFID-AGIDII 282
Query: 266 -------GLDWSVPLSFALELQKEGPVQGNLD-PMRLVVGNQVMIDGVN-AILDVLGSGP 316
G+D + + E K G +D L G + V I ++ G
Sbjct: 283 HPLQPNTGMDNT---AIKKEYGKYVTFLGAVDIQSALPSGVEATKKEVKTRIKELGDGGG 339
Query: 317 FI---FNLGHGITPQVDPKNVLDLVKTVRSE 344
+I N H I P V P+ ++ + KT
Sbjct: 340 YIVAPAN--H-IGPDVKPEAIVAMYKTAMEY 367
>gi|329954334|ref|ZP_08295426.1| conserved domain protein [Bacteroides clarus YIT 12056]
gi|328527602|gb|EGF54595.1| conserved domain protein [Bacteroides clarus YIT 12056]
Length = 333
Score = 45.6 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 88/276 (31%), Gaps = 39/276 (14%)
Query: 86 RNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCG 145
++F + G R+ ++ + P + F L I + I + + ++
Sbjct: 74 VKIQFEQGYG-RIQIEKPEDWDKIRPLPNDFFTPTLHIVKGIYDIA---GANTMILPTVY 129
Query: 146 APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI-- 203
+P+ + + +A + L + +D Y+ A GVD
Sbjct: 130 SPFQMLVQTVGA------KTVIAYAQKEPERIKQALGYFTDALIGYVKACKQIGVDGFYT 183
Query: 204 ------QIFDTHAGCLGEHEFENYAARSVGRIISAV-RRKYPNAKFISFAKGAGYMLKNY 256
Q F + FE + +++ N I +G+ +
Sbjct: 184 PTQGGEQKF-----YEVPNFFETFVKPYDLKVMQECNTNTKLNILHICDYEGS---YDDL 235
Query: 257 RRLTDSNAIGLDWSVPLSFA------LELQKEGPVQGNL--DPMRLVVGNQVMIDGVNAI 308
R ++ + ++ E + P G L L + +I+ VNA+
Sbjct: 236 TRFISYPGQIVNAPIEVNGKPFSLKDCERLFKRPAMGGLYRKGTILEGTTEQVINEVNAL 295
Query: 309 LDVLGSGPFIFNLG--HGITPQVDPKNVLDLVKTVR 342
LG FI LG I P+ NV +++
Sbjct: 296 KHDLGGKRFI--LGADCTILPKTPMDNVRAAIQSSH 329
>gi|299783153|gb|ADJ41151.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 338
Score = 45.6 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 98/321 (30%), Gaps = 35/321 (10%)
Query: 44 NFLDMCYTP---EYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDP 100
F D+ P + +E Q ++ +FD + D G +P
Sbjct: 33 EFGDVYQDPTIRDANIEGHKQYVKDLDFDFSKTMLDGYFPYPFRGVE-----------NP 81
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
++ L P + + +++ + ++ + +P + +
Sbjct: 82 RDLDDLANLVPLEEDDPWIQDQV--ALAKEQNQIVGDLPTFITVFSPLILLKWAQIDHTK 139
Query: 161 KDHGQNRV----FAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH 216
+ + V +N +L ++ + + A + G +V I+ +
Sbjct: 140 ESILTSDVKFADLYEKNPERVEQVLQVIAVDQGKVVRA-LKKGTEVDGIYYSTQSIQDPR 198
Query: 217 E----FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-- 270
E F + I+ + + + AG + T+ ++W+
Sbjct: 199 EDNLEFFKKVMEPIDLIVQEEINRNFDLNILHVCGFAGA-YNHLEWFTNYPLQVINWATL 257
Query: 271 ---VPLSFALELQKEGPVQGNLDPM---RLVVG-NQVMIDGVNAILDVLGSGPFIFNLGH 323
VPL +L + PV G D L G + + V ++D G I
Sbjct: 258 TDGVPLGEGKKLFGDRPVLGGFDNSIKGLLYTGTKEEIQQNVRNLIDEAGKKGVILGADC 317
Query: 324 GITPQVDPKNVLDLVKTVRSE 344
+ ++ +++ R
Sbjct: 318 TVPRDTPYDHLQWVIEAARDY 338
>gi|325264559|ref|ZP_08131289.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324030221|gb|EGB91506.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 354
Score = 45.6 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 49/250 (19%)
Query: 122 PIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLL 181
+ +++ KK + IG+ G P+ V + + + D N Y+ +L
Sbjct: 125 YDYNAVTEFVKKHEDKAIRIGWPG-PYQVFTLLYNAE---DFYIN---MYEEPELLKAML 177
Query: 182 DFLSDVSAEYLIAQIHA--------------GVDVIQIFDTHAGCLGEHEFENYAARSVG 227
D S E A G + +F +E + A +
Sbjct: 178 DRYCKASYEIYERMFEAANNKVDILRCCDDYGTQISTLF-------STSMWEEFFAENTK 230
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-------GLDWSVPLSFALELQ 280
++ ++ + + + G+D E
Sbjct: 231 MFADQ-AHRHGAYYMQHSCGAVRAIIPQLIQ-CGVDVLDPIQKVAGMDVD---ELKKEFG 285
Query: 281 KEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHG---ITPQVDPKNV 334
QG +D ++ + + ++ L G +I G V P+N+
Sbjct: 286 SYISFQGGVDTQHILPEGSPDEVYNETTRVIKALSPGGGYIL---CGSQEFEGDVPPENI 342
Query: 335 LDLVKTVRSE 344
L + +
Sbjct: 343 CALYEAAKQF 352
>gi|225164556|ref|ZP_03726806.1| uroporphyrinogen decarboxylase HemE [Opitutaceae bacterium TAV2]
gi|224800840|gb|EEG19186.1| uroporphyrinogen decarboxylase HemE [Opitutaceae bacterium TAV2]
Length = 94
Score = 45.6 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Query: 257 RRLTDSNAIGLDWSVPLSF-ALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG 313
+A+ LD++ PL + G +DP + + I
Sbjct: 1 MATLGLDAVELDYATPLDEIVTHFGSRTTLFGTIDPSGIFNFGTPDKVRAEAEKIFTAYR 60
Query: 314 SGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
P + G + P +N+ +V S
Sbjct: 61 DNPRLVIGAGCALPPTTPAENIHAIVNFAHS 91
>gi|296111382|ref|YP_003621764.1| hypothetical protein LKI_06275 [Leuconostoc kimchii IMSNU 11154]
gi|295832914|gb|ADG40795.1| hypothetical protein LKI_06275 [Leuconostoc kimchii IMSNU 11154]
Length = 339
Score = 45.2 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 55/328 (16%), Positives = 101/328 (30%), Gaps = 49/328 (14%)
Query: 46 LDMCYTPEYT---VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPIT 102
LD P+ V T + + R + D L SD L + EN
Sbjct: 32 LDAFKDPDIIDRTVSGTQKLVDRLSPDFVKLMSDGL-----FHYQFNYQEN-----SEHR 81
Query: 103 TQEIYLLNPNIDLFLNYLLPIFQSISILRKK--LPNHITLIGFCGAPWTVASYMI--SGG 158
T L P D + ++ +++ K+ + T +P T+ + +
Sbjct: 82 TVYDG-LVPIADDHP----WLKETATLIGKQRTVIGKRTGFYNIFSPTTLLKWALVKQDN 136
Query: 159 FIKDHGQNRVFAYQN----SRAFNWLLDFLSDVSAEYLIAQIHAGVDVI----QIF-DTH 209
D A L ++ + + I AG D I Q+ D
Sbjct: 137 GQHDKVNADKILATEILKKPEAIKQALQVIAQDVIKQVQTAIRAGADGIYYSTQVIQDP- 195
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW 269
L + +FE + A + +++ A K + + G G N ++W
Sbjct: 196 --RLDQDDFEKFVADTDHQVLQA-ANKLSDVNILHIC-GNGGARNNVHWFKTYEVAIINW 251
Query: 270 -----SVPLSFALELQKEGPVQ---GNLDPMRLV-VGNQVMIDGVNAILDVLGSGPFI-- 318
SV L + V GN L + V+ ++ G I
Sbjct: 252 ATDIESVSLREGKHIFPNKTVLGGFGNTKHDLLYQGEKSDIQQYVHTLIQETGRDHLIIG 311
Query: 319 FNLGHGITPQVDPKNVLDLVKTVRSEKI 346
N + +D + + + V+ +K+
Sbjct: 312 AN--CTVPRDIDLNRLRWVSEAVQQKKV 337
>gi|291547685|emb|CBL20793.1| Uroporphyrinogen-III decarboxylase [Ruminococcus sp. SR1/5]
Length = 349
Score = 45.2 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 58/377 (15%), Positives = 107/377 (28%), Gaps = 73/377 (19%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPE--------YRQIRKKFKNFLDMCYTP 52
MN R ++ + ++ ++ P WL G PE Y K +C
Sbjct: 1 MNSR-ERFIATVERKPVDRPACWL----GDPTPEAVPALCDYYHV--DNIKELKKVCGDD 53
Query: 53 EYTVELTLQPIRRYNFDAAILFSD------------ILVIADALGRNVRFVENEGPRMDP 100
Y VE+ P + A D + AD +E
Sbjct: 54 FYAVEI---PYKSPTCSAIFAAFDWYMNGSNVDTEHRTLTADGCFAQCEDLE-------- 102
Query: 101 ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ + P+ +L Y+ P + L + P+ ++G A +
Sbjct: 103 -DVEAVNFPWPDPEL---YIDP--EECRRLVDEAPDDKVVMG-----MLWACHFQDTCAA 151
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA--G-VDVIQIFDTHAGC----L 213
+ +++ D + D + L + A G V I I D +
Sbjct: 152 FGMQTCLMNMVAEPEMVHYVDDHIVDFYLKALKIFLEATKGKVQAILIGDDVGSQRGLMI 211
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI-------- 265
+ ++I K + + G+ + I
Sbjct: 212 SPALISEFVIPGAKKLID--LAHSYGVKVVYHSCGSIVEAIPLLIEAGVDVIHPIQALAA 269
Query: 266 GLDWSVPLSFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGH 323
G+D P + + + G +D L+ + + V L I + H
Sbjct: 270 GMD---PANLKDKFDGKISFCGGVDTQDLLPNGTPEQVAAKVKE-LRTYFPTGLIVSPSH 325
Query: 324 -GITPQVDPKNVLDLVK 339
G+ P V P N+ L
Sbjct: 326 EGLQPDVPPSNIKALFD 342
>gi|116626011|ref|YP_828167.1| putative methyltransferase CmuC [Candidatus Solibacter usitatus
Ellin6076]
gi|116229173|gb|ABJ87882.1| putative methyltransferase CmuC [Candidatus Solibacter usitatus
Ellin6076]
Length = 438
Score = 45.2 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 42/145 (28%), Gaps = 20/145 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAI------ 265
F R+ V + N + F G + + + + I
Sbjct: 294 SVATFRELWFPYYKRVNEWV---HANTTWKCFKHSCGSVERFFDSFIDAGFDVINPVQCS 350
Query: 266 --GLDWSVPLSFALELQKEGPV-QGNLDPM--RLVVGNQVMIDGVNAILDVLG-SGPFIF 319
G+D P+ + G +D Q + + V ++ G F+F
Sbjct: 351 AAGMD---PVELKRKYGSRLVFWGGGVDTQKTLPFGTPQEVREEVLRRCEIFAPGGGFVF 407
Query: 320 NLGHGITPQVDPKNVLDLVKTVRSE 344
N H + +N+ +V V
Sbjct: 408 NSIHNLQAGTPVENIAAMVDAVHEF 432
>gi|313899047|ref|ZP_07832574.1| conserved hypothetical protein [Clostridium sp. HGF2]
gi|312956246|gb|EFR37887.1| conserved hypothetical protein [Clostridium sp. HGF2]
Length = 362
Score = 45.2 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 38/250 (15%)
Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF-----------AYQ 172
++ I + + LP+ +C AP Y + + D R++ Y
Sbjct: 111 WEVIRRISEHLPDAEEATMYCNAPVEDGRYRL--AWFSDGPWTRLWDYRGMTNSLMDLYT 168
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIH-AGVDVIQIFDTHAGC----LGEHEFENYAARSVG 227
N + + + D + A +D I D + F +
Sbjct: 169 NPEDVHHVCRRVVDFFKRAAKRGVEEAHIDGIAFGDDLGMQKGPFMSPEMFREFYYPYYV 228
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS-FALELQKEGPVQ 286
+ + ++ +L + + G+D P+ +A+E Q+
Sbjct: 229 ELCEYAHSLGLHV-WLHSCGDVRKLLPDIIKS------GIDVLHPIQKYAMEEQEIADTF 281
Query: 287 GN-------LDPMRL--VVGNQVMIDGVNAILDVL---GSGPFIFNLGHGITPQVDPKNV 334
GN +D R+ + + + +DV G G +F L + + V +N
Sbjct: 282 GNQISFWAGIDLQRVLPFGSVEEVREETRHFIDVFHQRGKGRMVFTLNNRMQGNVPIENF 341
Query: 335 LDLVKTVRSE 344
+ ++
Sbjct: 342 IAFIEEAHRY 351
>gi|166032621|ref|ZP_02235450.1| hypothetical protein DORFOR_02336 [Dorea formicigenerans ATCC
27755]
gi|166026978|gb|EDR45735.1| hypothetical protein DORFOR_02336 [Dorea formicigenerans ATCC
27755]
Length = 270
Score = 45.2 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 22/210 (10%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ-- 104
E E+ + + D+ + + I ALG + V G +D I
Sbjct: 66 QFAKDFEVKSEVIRRRKEEFGLDSFNVGLGLRTIGVALGSKLG-VPEHG--IDYIEHHVL 122
Query: 105 ----EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFI 160
+ L L PI +S L+++ P+ +++ P + A +
Sbjct: 123 QDYADFDKLEVTDPYKNPVLAPILESAKRLKERFPD-VSMTTSVAGPISTAI------AV 175
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIA-QIHAGVDVIQIFD--THAGCLGEHE 217
+ + +N + LLD S ++ A G D T + + +
Sbjct: 176 RPVEKVLRDTRKNPEMLHKLLDLTVVCSLKWFEAFYHEFGSVGTNFSDPVTCMDVISKKQ 235
Query: 218 FENYAARSVGRIISA---VRRKYPNAKFIS 244
F+ ++ + ++I + P A
Sbjct: 236 FDEFSLPYIKKLIDGTEKIMGSRPGAHICG 265
>gi|169840247|ref|ZP_02873435.1| hypothetical protein cdivTM_24455 [candidate division TM7
single-cell isolate TM7a]
Length = 37
Score = 44.8 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 16/20 (80%)
Query: 26 RQAGRYLPEYRQIRKKFKNF 45
RQAGRYLPEY ++R + +F
Sbjct: 1 RQAGRYLPEYMRVRAQAGDF 20
>gi|325262580|ref|ZP_08129317.1| methylcobamide:CoM methyltransferase MtbA [Clostridium sp. D5]
gi|324032412|gb|EGB93690.1| methylcobamide:CoM methyltransferase MtbA [Clostridium sp. D5]
Length = 185
Score = 44.8 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 53 EYTVELTLQP------IRRYNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQ 104
+ LQ + A++ D+ V A+ G +R + E P + + ++
Sbjct: 38 DLISSSVLQARGMQLVAENTDAAASVSLMDLSVEAECFGSTIRVSDEEVPTVIGSVVNSE 97
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHG 164
E ++ ++I KL ++ P+++A ++ D
Sbjct: 98 EEAEALEVPEVGSGRTGIYIEAIEK-AAKLITDRPVLAGAIGPFSLAGRLM------DVS 150
Query: 165 QNRVFAYQNSRAFNWLLDFLSDVSAEYL-IAQIHA 198
+ ++ Y+ + +L+ ++ ++ Q+ A
Sbjct: 151 EAMIYCYEEPDMVHIVLEKVTKFLRNFISNFQLSA 185
>gi|225163817|ref|ZP_03726114.1| hypothetical protein ObacDRAFT_7413 [Opitutaceae bacterium TAV2]
gi|224801575|gb|EEG19874.1| hypothetical protein ObacDRAFT_7413 [Opitutaceae bacterium TAV2]
Length = 389
Score = 44.5 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 53/191 (27%), Gaps = 25/191 (13%)
Query: 170 AYQNSRAFNWLLDFL-SDVSAEYLIAQIHAGVDVIQIFDTHAG----CLGEHEFENYAAR 224
Y++ + +LD + + + +DV+ + D AG G +
Sbjct: 190 CYEDEEMLHDMLDTIGTTMVRLLETITREVPIDVLSVHDDMAGKSGPLFGPAHVRQFMVP 249
Query: 225 SVGRIISAVRRKYPNA----------KFI-SFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
R I + +G + + +
Sbjct: 250 YYRRCWDVAAAGGARIFQQDSDGDMNPIIDALMEGGINCMYPMEPAAGMDIVAT------ 303
Query: 274 SFALELQKEGPVQGNLDPMRLVVGNQVMIDGVN-AILDVLGSGPFIFNLGHGITPQVDPK 332
+ + G +D L + + ++ + ++ +G +F L H I
Sbjct: 304 --RKKYGRRLMHMGGIDKHVLRQTPEAIRRELDYKLQPLMRAGGMVFGLDHRIPNGTPLA 361
Query: 333 NVLDLVKTVRS 343
N VKT R
Sbjct: 362 NYRYYVKTARE 372
>gi|227511849|ref|ZP_03941898.1| conserved hypothetical protein [Lactobacillus buchneri ATCC 11577]
gi|227084939|gb|EEI20251.1| conserved hypothetical protein [Lactobacillus buchneri ATCC 11577]
Length = 337
Score = 44.5 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 20/187 (10%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVI-----QIFDTHAGCLGEHEFENYAARSV 226
Q+ + +L ++ + + A I AG D I I D A +F +Y +
Sbjct: 153 QSPELLHDVLKKIAGDINKQVDAAIDAGADGIYYSTQSIQDDRA---DNKDFFDYIQKPA 209
Query: 227 G-RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS-----VPLSFALELQ 280
+I+ + RK P I G + TD ++WS L +L
Sbjct: 210 DFSVINEINRKAPIN--ILHVCGFDQAKNHLEWYTDYQLQIINWSTHVDGYTLGEGKKLF 267
Query: 281 KEGPVQGNL---DPMRLVVG-NQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLD 336
+ V G + L G Q + I+ G+ + I +++
Sbjct: 268 GDRVVLGGFGITEQDVLYSGTKQEIQKEAQRIVSEAGTKGVLIGADCTIKRDTPIEHIKW 327
Query: 337 LVKTVRS 343
+ V +
Sbjct: 328 AQEAVHA 334
>gi|153855879|ref|ZP_01996854.1| hypothetical protein DORLON_02879 [Dorea longicatena DSM 13814]
gi|149751847|gb|EDM61778.1| hypothetical protein DORLON_02879 [Dorea longicatena DSM 13814]
Length = 294
Score = 44.5 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 53/173 (30%), Gaps = 14/173 (8%)
Query: 44 NFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV-ENEGPRMDPIT 102
F D E EL L V A+A+G + + E GPR
Sbjct: 26 TFPDAYKHAETMAELAQVLKECDKAPFCELPFCHTVEAEAMGGIINYGNEKTGPRAKEYL 85
Query: 103 TQEIYLLN--PNIDLFLNYLLPIFQSISILRKKLPNHITLIGF-CGAPWTVASYMISGGF 159
+I + P ID + + ++ IL +K + I F P T+ + +I
Sbjct: 86 CTDIEEILELPAIDFGKGRIQEVLKACRILHEKGEH----IVFEVSGPLTILNVLI---- 137
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC 212
D + + L Y+ G D I D+ G
Sbjct: 138 --DPKYVFKGMRKKPEFMERIFAKLGKEILAYMKLAKEQGADFISYADSSGGV 188
>gi|310657391|ref|YP_003935112.1| hypothetical protein CLOST_0077 [Clostridium sticklandii DSM 519]
gi|308824169|emb|CBH20207.1| conserved protein of unknown function [Clostridium sticklandii]
Length = 288
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 66/198 (33%), Gaps = 18/198 (9%)
Query: 45 FLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENE-GPRMDPITT 103
F D E L + + L + +ALG + + + GPR T
Sbjct: 28 FPDAYKNWEDMAVLAKEIKNHEDASFCTLPFCHTLEGEALGAVINYGDERIGPRGKDYLT 87
Query: 104 QEIYLLNP--NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
I L +D L + ++ S LR++ ++ L + P+T+ + +I
Sbjct: 88 SSIEDLLSISELDFSKGRLAEVLKACSYLRQE-GENVAL--YISGPFTILNLLI------ 138
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC------LGE 215
D ++ +L+ L ++ + GV++ D+ G L E
Sbjct: 139 DLRYVFKAFKKSPEVMEKILEKLRVELLRFIREAQNMGVNIFSYGDSSGGLNILGPKLSE 198
Query: 216 HEFENYAARSVGRIISAV 233
E + + +
Sbjct: 199 QIVEMFTYPLLKEAQQII 216
>gi|310827630|ref|YP_003959987.1| hypothetical protein ELI_2041 [Eubacterium limosum KIST612]
gi|308739364|gb|ADO37024.1| hypothetical protein ELI_2041 [Eubacterium limosum KIST612]
Length = 386
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 17/140 (12%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY-RRLTDSNAIGLDWSVPL 273
E +F+ + + + A+ + A F + +Y L + ++ P
Sbjct: 251 EKDFKRFYWPTFKAYVEALDARGIGANL--FVEHDWMRYLDYLNELPPLTHMSFEFGDPK 308
Query: 274 SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGP-FIF----NLGHGIT 326
A ++ K + G L P+ L+ Q ID ++D+L G +IF NL
Sbjct: 309 LIAEKVGKRHVISG-LYPLTLLKTGTEQQCIDKAKELIDILAPGGQYIFALDKNL----L 363
Query: 327 P--QVDPKNVLDLVKTVRSE 344
++P+N+ ++ V+
Sbjct: 364 KARDINPENLKAVLNFVKEY 383
>gi|302339859|ref|YP_003805065.1| hypothetical protein Spirs_3380 [Spirochaeta smaragdinae DSM 11293]
gi|301637044|gb|ADK82471.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
Length = 331
Score = 44.1 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 85/284 (29%), Gaps = 45/284 (15%)
Query: 56 VELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEG-PRMDP-------ITTQEIY 107
+TLQ ++ SD G F+ G P + P I+ +
Sbjct: 26 CNVTLQSSVNERYEGQTSGSD------EFGVQYTFIPQVGAPIVTPGTEILTDISAWKKQ 79
Query: 108 LLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNR 167
+ P++D + + + R+K +++ P+ ++
Sbjct: 80 IRFPDVDSYDWEAGSSRDTANWDREKF----SVVQLFNGPFERLHALMG------FENAL 129
Query: 168 VFAYQNSRAFNWLLDFLSDVSAEYLI--AQIHAGVDVIQIFDT----HAGCLGEHEFENY 221
+ + + ++ + AQ + D I +FD H+ L +
Sbjct: 130 IALLEYPSDVFEFFEAFTEYRIKMYKKIAQYYK-PDSIMVFDDYGADHSMLLSPDCWRTL 188
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRR---LTDSNAIGLDWSVPLSFA-- 276
+ + I V I + + ++ + ++AI V + A
Sbjct: 189 IKPHIKKAIDTVHDLG-----IFYTLHSCGFIRPIFKDIVEMGADAIHPMQYVNDAPALK 243
Query: 277 LELQKEGPVQGNLDPMRLV----VGNQVMIDGVNAILDVLGSGP 316
E + G D + ++ + + V +L L +
Sbjct: 244 KEYGRHITFTGGFDNIGILDNPGAEPEDIRKEVRRVLQELAADG 287
>gi|325261684|ref|ZP_08128422.1| hypothetical protein HMPREF0240_00659 [Clostridium sp. D5]
gi|324033138|gb|EGB94415.1| hypothetical protein HMPREF0240_00659 [Clostridium sp. D5]
Length = 395
Score = 44.1 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 58/189 (30%), Gaps = 23/189 (12%)
Query: 170 AYQNSRAFNWL-----------LDFLSDVSAEYLIAQIH--AGVDVIQIFDTHAGCLGEH 216
Y + + L + D+ +I + +G + +
Sbjct: 206 FYDEPELLHGINDYILEIYRTKLLKVIDLVQPDVIYFMEDLSGKNGPMV--------SPD 257
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT--DSNAIGLDWSVPLS 274
FE + A +I + F+ ++ N+ + ++ + +
Sbjct: 258 CFEEFVADYYRALIPLFKEHGVGNVFVDTDGDFARLIPNFMAAGVDGFLPMDVNAGMDIV 317
Query: 275 FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNV 334
+ + G+ + + + G + + IL V+ G +I H + P ++
Sbjct: 318 EVRKQFPKLKFIGSFNKLEIAKGPEAIDKEFERILPVIRGGGYIPGSDHQVAPSTSLEDY 377
Query: 335 LDLVKTVRS 343
+ +++
Sbjct: 378 KYYINKLKN 386
>gi|227432934|ref|ZP_03914876.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227351280|gb|EEJ41564.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 333
Score = 44.1 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 36/323 (11%), Positives = 90/323 (27%), Gaps = 48/323 (14%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI 106
D P + +Q + Y D F ++ NV F DP +
Sbjct: 30 DALENPTIAT-INIQGHKEYVDDLRPDFVKLMSDGY---FNVPFDN----VTDPKKIDNL 81
Query: 107 YLLNPNIDLFLNYLLPIFQSISILR--KKLPNHITLIGFCGAPWTV---ASYMISGG-FI 160
+ D + + + +++ KK+ +P T+ A Y
Sbjct: 82 SKIQEIQDDDP----WLTEQVKLVQEQKKVIGQRRGFYNIFSPVTILKWALYDAESELPA 137
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCLGEHEFE 219
K + Q +L+ L+ + + A + G D + E +
Sbjct: 138 KGDERLTELFIQYPEEIKHILNVLAKNIIKQVKAVVVDGGADGV--------YYSTQELQ 189
Query: 220 NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN---AIGLDWSVPLSFA 276
+++ + +++ + + + + + + ++ +D+ +P+
Sbjct: 190 --SSKYTKELFDGLQKNVDLSVIDAIKSVSDISILHICGFSGTSNHLEWFIDYDLPIVNW 247
Query: 277 LELQKEGPVQ---------------GNLDPMRLV-VGNQVMIDGVNAILDVLGSGPFIFN 320
+ +Q GN L + V +L + I
Sbjct: 248 AVTVEGVSLQQGQQIFKDKVVLGGFGNTTDDVLYNGSKDEIEAAVQGLLSNVDKKRVIIG 307
Query: 321 LGHGITPQVDPKNVLDLVKTVRS 343
+ + ++ + V
Sbjct: 308 ADCTVPRDIPVDHLKWAIAAVHE 330
>gi|310829949|ref|YP_003962306.1| hypothetical protein ELI_4408 [Eubacterium limosum KIST612]
gi|308741683|gb|ADO39343.1| hypothetical protein ELI_4408 [Eubacterium limosum KIST612]
Length = 384
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR-RLTDSNAIGLDWSVPLSF 275
+FE + + + + A+ + A F + +Y L ++ + + P
Sbjct: 250 DFERFYWPTFKKYVEALDKAGVGATI--FVEQDWSRYYDYLFDLPENTMMIFEEGDPSEI 307
Query: 276 ALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIF----NLGHGITP- 327
+L K+ + G PM ++ + +D I+DVL G +IF NL +T
Sbjct: 308 KKKLGKKHILAG-FYPMGVLKTGTEKDCLDKAKEIVDVLAPGGKYIFTLDKNL---LTVR 363
Query: 328 QVDPKNVLDLVKTVRSEKI 346
++P+N+ +++ V+ +
Sbjct: 364 DINPENLKAVLRFVKEYAV 382
>gi|332983362|ref|YP_004464803.1| hypothetical protein Mahau_2857 [Mahella australiensis 50-1 BON]
gi|332701040|gb|AEE97981.1| hypothetical protein Mahau_2857 [Mahella australiensis 50-1 BON]
Length = 365
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 67/247 (27%), Gaps = 41/247 (16%)
Query: 119 YLLPIFQSISILRKKLPNHITLIGFC-GAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
P+ ++ + F G+PW M + +
Sbjct: 135 DWSPVIEAKRRIGDSGIVRSGYFDFGQGSPWQSFVNMYGT------ENAIMACFDKPDWL 188
Query: 178 NWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC-----LGEHEFENYAARSVGRIISA 232
+++LD + + L G + + +T G + + + A
Sbjct: 189 HYVLD---SMLKKKLTVIERGGRIELDLVETGGGAGSSTVISPTLHKEFCLPYDQIQHKA 245
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL---------SFALELQKEG 283
+ K + G L + ++ GL+ P ++ +
Sbjct: 246 LHEA--GTKVVYHLCGGLMPLLDIVAQNGAD--GLETMTPPAMGGDCNLAEADRQVGDKL 301
Query: 284 PVQGNLDPMRLV--VGNQVMIDGVNAILDVLGSGPFIFNLGHGITP-----QVDPKNVLD 336
G D + + + V + +G +I +P DP+N+
Sbjct: 302 FFIGGFDQNAGFEKGNPKSVKEMVYKLHTSCPNGGYIC------SPSDHFFFGDPENIKA 355
Query: 337 LVKTVRS 343
V+ R
Sbjct: 356 FVEAARE 362
>gi|326802726|ref|YP_004320544.1| hypothetical protein HMPREF9243_0132 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650130|gb|AEA00313.1| conserved domain protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 337
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 22/219 (10%)
Query: 50 YTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRMDPITTQ---- 104
+ P + + +++Y+ D A S+ L + V +G + T
Sbjct: 32 HDPVKYAQALAEKVKQYDLDYAGHSSNGLFTVEDYVDEVDHSPVYKGGVSRVVKTPYNQP 91
Query: 105 -EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDH 163
++ L N+D+ +S++ L L + + + +P T+ + G
Sbjct: 92 GDLKKLPHNLDISTASYQRELKSLTYLLDLLGDQVPVTVISFSPLTILDKLTQG------ 145
Query: 164 GQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC------LGEHE 217
+ + L+ L++V +Y+ A + G + + A + E E
Sbjct: 146 RAVEFIRSEEKELIHQTLENLTNVQVQYVQAALDLGAAGVYL----ASQFIRYDRVTEEE 201
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY 256
+ + +I+ A + + N+ ++K+Y
Sbjct: 202 YLEFGKPYDLKILEASKAGWFNSFHAHGTNIMFDLIKDY 240
>gi|305664187|ref|YP_003860475.1| hypothetical protein Igag_1798 [Ignisphaera aggregans DSM 17230]
gi|304378756|gb|ADM28595.1| hypothetical protein Igag_1798 [Ignisphaera aggregans DSM 17230]
Length = 443
Score = 44.1 bits (103), Expect = 0.034, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 68/200 (34%), Gaps = 47/200 (23%)
Query: 176 AFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHE--------FENYAARSVG 227
+LD + DV + I A + +Q+ A LG E F +
Sbjct: 254 LAEAVLDNIVDVLMYNVKKYIDAFGEYVQVI-GFADDLGTEEGPQISVQVFRDMYKHRYE 312
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
I S +++ ++K F G + + D IGLD P+ + + G
Sbjct: 313 EIFSYIKK---HSKMYIFLHSDGAIFPLIKEFID---IGLDIINPIQLSAK--------G 358
Query: 288 NLDPMRL----------------------VVGNQVMIDGVNAILDVLG-SGPFIFNLGHG 324
+DP RL + +I V ++ + +G FIF H
Sbjct: 359 -MDPERLKKEYGEQITFWGGGADVQRVLPFAKSDEVIQHVKNLIKIFAPNGGFIFATTHN 417
Query: 325 ITPQVDPKNVLDLVKTVRSE 344
I P P+N++ KT
Sbjct: 418 IQPPTPPENIVLTFKTAYEY 437
>gi|294102635|ref|YP_003554493.1| Uroporphyrinogen decarboxylase (URO-D) [Aminobacterium colombiense
DSM 12261]
gi|293617615|gb|ADE57769.1| Uroporphyrinogen decarboxylase (URO-D) [Aminobacterium colombiense
DSM 12261]
Length = 331
Score = 43.7 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 53/362 (14%), Positives = 116/362 (32%), Gaps = 59/362 (16%)
Query: 1 MNERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M R Q+I L + P +W+ +F + P EL
Sbjct: 3 MTHR-QRIESTLAFKETDRLPYSMWM-------------------HFPNRDRHPRRLAEL 42
Query: 59 TLQPIRRYNFDAA--ILFSDILVIADALGRNV--RFVENE---GPRMDPITTQEIYLLNP 111
+L ++Y+ D + F I + NV FV+ P ++ ++ +
Sbjct: 43 SLAYQKKYDLDFIKFMPFGMYSTIDYGMDLNVFPGFVDAPVAQKPVIEKVSDWDNIRY-- 100
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+ + ++ IL + + + + +P T A + S
Sbjct: 101 -VSGTAGEYAIVLEAQRILFEMMDEKLPFLQTVFSPMTTAVKLSSPQ------LLVKHIA 153
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVD----VIQIFDTHAGCLGEHEFENYAARSVG 227
++ + L+ ++ + E++ A + G D Q+ + + + + + +
Sbjct: 154 EDPQRVRKALEIITATTIEFVKATVALGTDGLFFATQM--STKNLIDDKTHDAFVKKYDL 211
Query: 228 RIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQK 281
+++ V+ + N GA M++ + L W +
Sbjct: 212 EVLNGVKNSTWFNV---LHLHGANAMIREVQDYP---VQALSWHDRDDGPSMEEVRGYSD 265
Query: 282 EGPVQGNLD--PMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVK 339
+ V G L L N+ ++ V + G I G I P + + + +
Sbjct: 266 KVFV-GGLSWGEKWLSKNNEEVVAEVREVAGRSGGKGVILGPGCVIDPSTPEERLELVYR 324
Query: 340 TV 341
TV
Sbjct: 325 TV 326
>gi|111608960|gb|ABH11037.1| uroporphyrinogen decarboxylase [Polytomella parva]
Length = 34
Score = 43.7 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 317 FIFNLGHGITPQVDPKNVLDLVK 339
I NLGHG+ P V L +
Sbjct: 1 HILNLGHGVQPGTPEDAVAHLFE 23
>gi|319762123|ref|YP_004126060.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|330826046|ref|YP_004389349.1| Uroporphyrinogen decarboxylase [Alicycliphilus denitrificans K601]
gi|317116684|gb|ADU99172.1| uroporphyrinogen decarboxylase [Alicycliphilus denitrificans BC]
gi|329311418|gb|AEB85833.1| Uroporphyrinogen decarboxylase (URO-D) [Alicycliphilus
denitrificans K601]
Length = 336
Score = 43.7 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 65/366 (17%), Positives = 117/366 (31%), Gaps = 57/366 (15%)
Query: 1 MNERK--QKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTV 56
M Q+I + G + PPI W R+ PE D+ P+ V
Sbjct: 1 MQPMNHWQRIEAAIGGEATDRPPIALW------RHFPE-----------DDL--HPDKLV 41
Query: 57 ELTLQPIRRYNFDAA-ILFSDILVIAD--ALGRNVRFVENEGPRMDP--ITTQEIYLLNP 111
TLQ ++ FD + S + D A+ + P + T++ + P
Sbjct: 42 AHTLQWQDKWQFDLVKFMPSGTYGVEDWGAVSAYRGAANGAREVVQPAVLRTEDWRRIAP 101
Query: 112 NIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAY 171
+D+ ++++ + L + L+ +P T A M K R F
Sbjct: 102 -LDVRQGSYGRQNEALAAAARGLGGRVPLLQTVFSPLTTARKM---STEKMFADLRCF-- 155
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFENYAARSVGRI 229
L +++V+ + + + G + A L E+E + R +
Sbjct: 156 --PDELERALMVITEVTIRFALDALALGAHGVFFATQQASHRLLSTAEYERFGKRYDLMV 213
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRR-LTDSNAIGLDWSVPLSF-----ALELQKEG 283
A+R K F + L+D A +W L+ A E
Sbjct: 214 FEALRDKA------RFNMLHAHGDDIMFDLLSDYPAEMFNWHDRLTDPTIAQAAERFPRL 267
Query: 284 PVQGNLDPM--RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP--QVDPKNVLDLVK 339
V G +D L + + D V+ L + G + P D ++ V+
Sbjct: 268 LV-GGIDEHGTLLRGSERDIEDQVHEALSQAAGRRLMIGPGC-VLPVAATD-ASIRAAVR 324
Query: 340 TVRSEK 345
+
Sbjct: 325 ATHQFQ 330
>gi|310829032|ref|YP_003961389.1| hypothetical protein ELI_3467 [Eubacterium limosum KIST612]
gi|308740766|gb|ADO38426.1| hypothetical protein ELI_3467 [Eubacterium limosum KIST612]
Length = 385
Score = 43.7 bits (102), Expect = 0.047, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 9/138 (6%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY-RRLTDSNAIGLDWSVPL 273
E +F + + + + A F + +Y L ++ + ++
Sbjct: 250 EKDFLKFYWPTFKAYVEGLNAAGAGANL--FVEEDWSRYLDYLNELPENTLMVFEYGDSK 307
Query: 274 SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITP--Q 328
++ V G L P+ L+ Q ID ++D+ G +IF I
Sbjct: 308 EIKAKVGSRHIVSG-LYPIGLLKSGTEQACIDKAKELIDIFAPDGGYIFGFDKAILRLND 366
Query: 329 VDPKNVLDLVKTVRSEKI 346
++P N+ + V I
Sbjct: 367 INPANLKAVFNFVHEYGI 384
>gi|291547682|emb|CBL20790.1| Uroporphyrinogen-III decarboxylase [Ruminococcus sp. SR1/5]
Length = 415
Score = 43.3 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 38/151 (25%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
++ +I V + ++ +F G + L ++ G D P+
Sbjct: 275 SLEKYRTLFKPYHTKINEYV---HKHSSMKTFLHSCGSIFPVIGDLAEA---GFDILNPV 328
Query: 274 SFALELQKEGPVQGNLDPMRL----------------------VVGNQVMIDGVNAILDV 311
+ N+DP RL + + + D ++D+
Sbjct: 329 QTSAA---------NMDPARLKQEYGKDITFWGGGCNTRKILNMGTEKEVYDYCRRMIDI 379
Query: 312 L-GSGPFIFNLGHGITPQVDPKNVLDLVKTV 341
G F+FN H I V P+N++ + K V
Sbjct: 380 FFQDGGFVFNQEHNILGDVPPQNIMAMYKAV 410
>gi|325264857|ref|ZP_08131585.1| putative methylcobamide:CoM methyltransferase isozyme M
[Clostridium sp. D5]
gi|324029846|gb|EGB91133.1| putative methylcobamide:CoM methyltransferase isozyme M
[Clostridium sp. D5]
Length = 359
Score = 43.3 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 44/138 (31%), Gaps = 17/138 (12%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
F+ ++ + +K + G +L + + + + +
Sbjct: 208 PDVFKEVHLPLYKELVDHIHKK--GMHVWLHSCGDNTLLMDSLVESGIDVLHPIQKGCMD 265
Query: 275 F---ALELQKEGP-VQGNLDPMRLV--VGNQVMIDGVNAILDVLGS--GPFI---FNLGH 323
A + + + G +D LV + + + V + + G G I N
Sbjct: 266 EKAVAEKYGGKITFLYG-IDVQHLVPMGTPKEIREEVRSAKKLFGREDGGLILAAAN--- 321
Query: 324 GITPQVDPKNVLDLVKTV 341
GI P +N+ L + V
Sbjct: 322 GIMPDTPLENIKALYEEV 339
>gi|167759803|ref|ZP_02431930.1| hypothetical protein CLOSCI_02166 [Clostridium scindens ATCC 35704]
gi|167662422|gb|EDS06552.1| hypothetical protein CLOSCI_02166 [Clostridium scindens ATCC 35704]
Length = 296
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 14/232 (6%)
Query: 38 IRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV-ENEGP 96
R+ F D E L+ R L V A+A+G + + E GP
Sbjct: 29 TRELELQFPDAYMHHETMAALSKALKRHDGASFCELPFCHTVEAEAMGGIINYGNEKTGP 88
Query: 97 RMDP--ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
R T+ E L P ++L + + + LR++ + + + P+T+ + +
Sbjct: 89 RAKEYICTSPEELLELPAMNLQEGRIHEVLLACQALREEGEHVVLQVS---GPFTILNVL 145
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG--C 212
I + + + + L ++ GVD+I D+ G
Sbjct: 146 IDAKY-----VFKAMRKK-PELMKEVFWKLGGEILRFMEEAKKYGVDMISYADSSGGLNI 199
Query: 213 LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
LG E + K ++ I + L + +A
Sbjct: 200 LGPKMAEQVVEDFTYEFLKKAAEKLGDSPLILLCPKTTFALLGTGKAEFVDA 251
>gi|116617287|ref|YP_817658.1| uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096134|gb|ABJ61285.1| Uroporphyrinogen-III decarboxylase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 333
Score = 43.3 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 41/326 (12%), Positives = 92/326 (28%), Gaps = 54/326 (16%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI 106
D P + +Q + Y D F ++ NV F DP +
Sbjct: 30 DALENPTIAT-INIQGHKEYVDDLRPDFVKLMSDGY---FNVPFDN----VTDPKNIDNL 81
Query: 107 YLLNPNIDLFLNYLLPIFQSISILR--KKLPNHITLIGFCGAPWTV---ASYMISGG-FI 160
+ D + + + +++ KK+ +P T+ A Y
Sbjct: 82 SKIQEIQDDDP----WLTEQVKLVQEQKKVIGQRRGFYNIFSPVTILKWALYDAESELPA 137
Query: 161 KDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQI-HAGVDVIQIFDTHAGCLGEHEFE 219
K + Q +L+ L+ + + A + G D + E +
Sbjct: 138 KGDERLTELFIQYPEEIKHILNVLAKNIIKQVKAVVVDGGADGV--------YYSTQELQ 189
Query: 220 NYAARSVGRIISAVRRKYP-------------NAKFISFAKGAGYMLKNYRRLTDSNAIG 266
+++ + +++ + I G L+ + D +
Sbjct: 190 --SSKYTKELFDGIQKNVDLSVIDAIKSVSDISILHICGFSGTSNHLEWFI---DYDLPI 244
Query: 267 LDWSV-----PLSFALELQKEGPVQGNL----DPMRLVVGNQVMIDGVNAILDVLGSGPF 317
++W+V L ++ K+ V G D + + V +L +
Sbjct: 245 VNWAVTVEGISLQQGQQIFKDKVVLGGFGNTTDDVLYNGSKDEIEAAVQGLLSNVDKKRV 304
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVRS 343
I + + ++ + V
Sbjct: 305 IIGADCTVPRDIPVDHLKWAIAAVHE 330
>gi|312126520|ref|YP_003991394.1| hypothetical protein Calhy_0272 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776539|gb|ADQ06025.1| hypothetical protein Calhy_0272 [Caldicellulosiruptor
hydrothermalis 108]
Length = 372
Score = 43.3 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 57/174 (32%), Gaps = 20/174 (11%)
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHA-------GVDVIQIFDTHAGCLGEHEFENYAARSV 226
+ ++++++D S + + + G + I F+ + + F+ +
Sbjct: 191 PDLVDEMIEYMTDFSIKLMEKALKDVEVDFALGWEDI-AFN-NGPIISPQMFKEFLMPRY 248
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN---AIGLDWSVPLSFALEL-QKE 282
RI + + + + G + T N + + +L
Sbjct: 249 KRIADFLHKHGVDI-IGTDCDGNIMPIVELWLETGFNLMFPVEVHAGTDPVVLKKLYGDS 307
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNA---ILDVLGSGPFIFNLGHGITPQVDPKN 333
+ G +D +L + ++ + +++ G P I H P V +N
Sbjct: 308 IRLMGGVDKTKLQGSKEDILKELKRLEKVVEQGGFIPHI---DHRCLPDVPYEN 358
>gi|160936227|ref|ZP_02083600.1| hypothetical protein CLOBOL_01123 [Clostridium bolteae ATCC
BAA-613]
gi|158441037|gb|EDP18761.1| hypothetical protein CLOBOL_01123 [Clostridium bolteae ATCC
BAA-613]
Length = 334
Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 46/339 (13%), Positives = 103/339 (30%), Gaps = 69/339 (20%)
Query: 3 ERKQKILEVLQGNVINPPPI--WLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
++++I VL+G ++ P+ WL +F + + E +E L
Sbjct: 15 TKRERIRNVLEGKPVDRTPVGFWL-------------------HFPEEMHHGEKAIEAHL 55
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYL 120
++ + D I + N+ + N I
Sbjct: 56 DFMKATDTD----------ILKIMNENILYDGN-----TKIERLGDISKFRGFSRKDAIF 100
Query: 121 LPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQN----RVFAYQNSRA 176
+ I + K ++ +AS GF ++ +F +
Sbjct: 101 QDQMEIIKRIADKAKGEYPIMSTIHG--LIASAFHETGFAGNYTSMGYQLTLFCRERPAE 158
Query: 177 FNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH-------EFENYAARSVGRI 229
+ +++ E+ + AG + I LG EFE + A +
Sbjct: 159 MKKVFRTVAETLMEFSDCSLEAGAEGIFY-----AALGGERNFFTDEEFEEFVAPYEKMV 213
Query: 230 ISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-----PLSFALELQKEGP 284
+++ + + K ++ R D + ++W + L+ L +
Sbjct: 214 YDHIKKTT-DFNVLHICKSN----IDFNRYKDLHPAIVNWGIYGNDFSLTKGAGLFSDSI 268
Query: 285 VQGNLDPMR----LVVGNQVMIDGVNAILDVLGSGPFIF 319
+ G P R + + + + +L+ + PFI
Sbjct: 269 ILGGF-PDRHGVLVTGTEEEIFKHTSEVLEEMKGRPFIV 306
>gi|330836095|ref|YP_004410736.1| hypothetical protein Spico_0112 [Spirochaeta coccoides DSM 17374]
gi|329747998|gb|AEC01354.1| hypothetical protein Spico_0112 [Spirochaeta coccoides DSM 17374]
Length = 362
Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 44/302 (14%), Positives = 101/302 (33%), Gaps = 35/302 (11%)
Query: 1 MNERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M Q++ L+G +++ P W G ++ + + K+F +
Sbjct: 1 MISHTQRVKAALEGKILDRPAFVAW-----GPHM---NLVDRNAKDF----------AKA 42
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVEN------EGPRMDPITTQEIYLLNPN 112
T+ Y FD + S+ L +A G+ +R E+ + +++ I +
Sbjct: 43 TIDYQNAYGFDFIKVMSNGLYFPEAFGQKIRPAEHILDETWQNTQINVINDPHEWARLKV 102
Query: 113 IDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQ 172
+ + + L + ++ +P+ M G F ++ ++
Sbjct: 103 PSMKEGVFAREIEVVKRLVDYFQGDVPVLPTVFSPFIWMGEMTGGYFRQETIVAH---FK 159
Query: 173 NSRAFNWL-LDFLSDVSAEYLIAQIHAGVDVIQI--FDTHAGCLGEHEFENYAARSVGRI 229
S + + L +++ + + + AG D + AG +G+ FE Y + R
Sbjct: 160 YSEKYARIGLAVVNETNELLMEEFVKAGADGFFLGYQAGMAGIMGKEMFEEYGKKYDIRN 219
Query: 230 ISAVRRK--YPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQG 287
I ++ + + A +Y + A + L + + G
Sbjct: 220 IQKIKDRTWFNMAHVCHGDAALSEWFLDYPVEALNWADQDSEQHSFAEMRRL-TDVVLVG 278
Query: 288 NL 289
L
Sbjct: 279 GL 280
>gi|320162365|ref|YP_004175590.1| hypothetical protein ANT_29640 [Anaerolinea thermophila UNI-1]
gi|319996219|dbj|BAJ64990.1| hypothetical protein ANT_29640 [Anaerolinea thermophila UNI-1]
Length = 315
Score = 43.3 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 84/263 (31%), Gaps = 25/263 (9%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMI 155
P++ I + P D L++ + L + ++ +P+ M
Sbjct: 63 PQLPFIQRPADWAKMPFYD--LDFYAEPLAVVKGLVQAAKPEAVVVLTLYSPF-----MC 115
Query: 156 SGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTH-----A 210
+G + ++ A L ++ E++ A G+D F T A
Sbjct: 116 AGHTLGSDRALSRHIEEDPEAVKKGLSIITKSLLEFVRACAALGLDG---FYTSTQGGEA 172
Query: 211 GCLG-EHEFENYAARSVGRIISAVRRKYP-NAKFISFAKGAGYMLKNYRRLTD-SNAIGL 267
G F+ ++ V R P N I + + ++G+
Sbjct: 173 GRFSNPALFDEVIRPFDRLLMDEVNRLTPFNILHICDYHLPYERVDGFLDYPGQVVSLGM 232
Query: 268 DWS---VPLSFALELQKEGPVQGNLDPMRLVV--GNQVMIDGVNAILDVLGSGPFIFNLG 322
+ + + + A L + + G L+ ++ + + V ++ FI
Sbjct: 233 ELTTRTLTPAEAYALFRRPIL-GGLNRHGVIAHGTPEQIRAEVESVCAAA-PPRFILGAD 290
Query: 323 HGITPQVDPKNVLDLVKTVRSEK 345
+ + +N+ ++T + +
Sbjct: 291 CTVPSETPWENLRTAIETAHTFR 313
>gi|283798682|ref|ZP_06347835.1| uroporphyrinogen decarboxylase [Clostridium sp. M62/1]
gi|291073540|gb|EFE10904.1| uroporphyrinogen decarboxylase [Clostridium sp. M62/1]
gi|295090698|emb|CBK76805.1| Uroporphyrinogen-III decarboxylase [Clostridium cf. saccharolyticum
K10]
Length = 335
Score = 42.5 bits (99), Expect = 0.091, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 93/300 (31%), Gaps = 43/300 (14%)
Query: 3 ERKQKILEVLQGNVINPPP--IWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTL 60
+K++I + G + P +W ++P + P E T
Sbjct: 2 TKKERIKAAVSGQKPDCLPYSLWT------HMP-------------GIDLDPVLLAEKTY 42
Query: 61 QPIRRYNFDAAILFSDILVIADALGRNVRFVE-NEGPRM----DPITTQEIYLLNPNIDL 115
+ + Y+ D ++ + + G V + + G P+ E +L
Sbjct: 43 EFYKTYDVDFIKTMNNGMYAIEDFGCEVDYSDIERGGVARVTKTPVHEPEDWLTLKKCSC 102
Query: 116 FLNYLLPIFQSISILRKKLPNH-ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
L S+ +L +K+ + ++ +P T A + K R +
Sbjct: 103 HEGSLHRELASLELLLQKVKGEDVPVVFTVFSPATTADKL---SGKKMLSHIRS---GHG 156
Query: 175 RAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC---LGEHEFENYAARSVGRIIS 231
L+ +++ + E I G D I F + + E+ Y R++
Sbjct: 157 EMVKKALEIITETTMEVAAEAIRLGADGI-FFASQMSSYDTMTAEEYMEYGRPYDLRVLE 215
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV--PLSFALELQKEGPVQGNL 289
A + N A G M + + S W L A L + + G L
Sbjct: 216 AAGDGWLNT---LHAHGNNIMFEVLKDYPVSVFNWHAWETLPDLDEAFCLTGK-CLMGGL 271
>gi|310828073|ref|YP_003960430.1| hypothetical protein ELI_2485 [Eubacterium limosum KIST612]
gi|308739807|gb|ADO37467.1| hypothetical protein ELI_2485 [Eubacterium limosum KIST612]
Length = 384
Score = 42.5 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 80/263 (30%), Gaps = 29/263 (11%)
Query: 96 PRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI-TLIGFCGAPWTVASYM 154
P + T + + + + + + K + AP+ + +
Sbjct: 134 PSIQNDTIFSALNFAKAYKAYHDSMQYMTEIADCMTDKYGYAVLPPGAGTEAPFDYLADL 193
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLG 214
I F + R F + A LL + + Q A L
Sbjct: 194 I-RSFTNINKDIRRFPQKVEEACEALLPLTCKAAIGPVQNQY---ARCFIPL-HMAPFLN 248
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
+ +FE + + +++ + A +I L L + ++ P
Sbjct: 249 KKQFERFWWPTFQKLMKYIFENNMGA-WIFCEHDWSDKLDYLAELEGRVYMCFEYGDPSK 307
Query: 275 FALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVD- 330
+ K V G L P+ + Q ID +LD++ G +IF+ D
Sbjct: 308 IKKIVGKNHIVSG-LYPISYLQTKSKQECIDEAKRLLDIMAPGGGYIFS--------TDK 358
Query: 331 ---------PKNVLDLVKTVRSE 344
+N+ +++TVR
Sbjct: 359 IIFSLKGQIAENLKAVLETVREY 381
>gi|302389279|ref|YP_003825100.1| Uroporphyrinogen-III decarboxylase [Thermosediminibacter oceani DSM
16646]
gi|302199907|gb|ADL07477.1| Uroporphyrinogen-III decarboxylase [Thermosediminibacter oceani DSM
16646]
Length = 294
Score = 42.1 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 56/193 (29%), Gaps = 15/193 (7%)
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG----CLGEHE 217
+ + +L + L VD I I D AG
Sbjct: 93 TLEVAARMIKKEPEKYRRVLQEIRKRRESLLERLKEFEVDGIFILDDLAGKNGPLFSPQA 152
Query: 218 FENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAI------GLDWSV 271
+ + +++ +++ F G + L D GLD+
Sbjct: 153 LREFIFPELKVLVNIIKQLGKPV----FFHSDGLIKPILPDLLDLEVDVLHGFDGLDFES 208
Query: 272 PLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDP 331
+ GN + + ++ + +++++ +IF+ G TP
Sbjct: 209 LKEIKEIIHGRAAFMGNFNLHFKANNAKSVLANLRSVMELFVESGYIFSSDGGFTPDS-I 267
Query: 332 KNVLDLVKTVRSE 344
+N++ L +
Sbjct: 268 ENLVALYQYFHQF 280
>gi|239624479|ref|ZP_04667510.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520865|gb|EEQ60731.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 319
Score = 42.1 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 40/265 (15%), Positives = 77/265 (29%), Gaps = 19/265 (7%)
Query: 90 FVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWT 149
EN P M I T + + +I L ++ + + + + IG
Sbjct: 56 MNENLVPNMGSIKTPDDWKCIRSISLDDRFMQDEIELVKRVLDRCDMDAYNIGTLHGIVA 115
Query: 150 VASYMIS---GGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF 206
+ I G + + + ++D + + G+D I
Sbjct: 116 STIHPIEPDYGYMPVRQLLVSHLRQNKAPVLDA-MKRIADGLCQLAGKFVELGLDGILY- 173
Query: 207 DTHAGC------LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY-MLKNYRRL 259
AG + EFE Y +I++A N + K+Y+ L
Sbjct: 174 ---AGLGGERFLFTDQEFEEYIMPFDKQIMNACLEAGGNNILHMCKTDVNFDRYKSYKGL 230
Query: 260 -TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPMR---LVVGNQVMIDGVNAILDVLGSG 315
T +N + + LS + + + G L + + + V ++ G
Sbjct: 231 YTIANWGVYEAGLSLSEGRRIFTDCAIMGGLSNHMGPLIEGTADEIREEVRRVVAEAGRT 290
Query: 316 PFIFNLGHGITPQVDPKNVLDLVKT 340
FI I + V
Sbjct: 291 GFILGTDCTIPTGTSYDRLRTAVDA 315
>gi|154497179|ref|ZP_02035875.1| hypothetical protein BACCAP_01472 [Bacteroides capillosus ATCC
29799]
gi|150273578|gb|EDN00706.1| hypothetical protein BACCAP_01472 [Bacteroides capillosus ATCC
29799]
Length = 360
Score = 42.1 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 29/188 (15%)
Query: 171 YQNSRAFNWLLDF-LSDVSAEYLIAQIHAG--VDVIQIFD----THAGCLGEHEFENYAA 223
+ ++++D + A AG +D++ +D +A L E +
Sbjct: 171 CMDPDMVHYIMDKFCTYWCGFIRNAMEAAGEYLDMVYTYDDIAAQNALLLSPEMLEEFVY 230
Query: 224 RSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTD------------SNAIGLDWSV 271
R+ S ++ + + G +L +L + + + W
Sbjct: 231 PYHRRMNSVIKAY--GKPIMYHS--CGAVLSQLPKLAELPIDVLNPLQPMAKGMDFQWLK 286
Query: 272 PLS-FALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQV 329
L +Q L P + + V + +LG G +I H + +
Sbjct: 287 DNWGDRLSFHGGLCLQSTL-PK---GTPDEVREAVRRAVSILGKNGGYIMTSAHYLQNDI 342
Query: 330 DPKNVLDL 337
+N+L +
Sbjct: 343 PTENILAM 350
>gi|78223946|ref|YP_385693.1| uroporphyrinogen decarboxylase [Geobacter metallireducens GS-15]
gi|78195201|gb|ABB32968.1| Uroporphyrinogen decarboxylase (URO-D) [Geobacter metallireducens
GS-15]
Length = 340
Score = 42.1 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 49/157 (31%), Gaps = 10/157 (6%)
Query: 6 QKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRR 65
++++ V G + PP L Y R P + ++
Sbjct: 5 ERVMAVFTGEKPDRPPF------ALTLSLYGA-RLINAPLASYYADPALYAQGQVRVAEL 57
Query: 66 YNFDAAILFSDILVIADALGRNVRFVENEGPRM--DPITTQEIYL-LNPNIDLFLNYLLP 122
+ D + + A+A G +R+ + P + P L+P L
Sbjct: 58 VSPDIIFAPFALALEAEAYGAELRYHPDGPPMVRRHPFRAPRDAASLSPPAIDTCPGLAY 117
Query: 123 IFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGF 159
+ +S+ L + L G AP + + ++
Sbjct: 118 LCESVRRLADHFCGSVPLAGVLTAPVDLPAMLMGLDG 154
>gi|160936538|ref|ZP_02083905.1| hypothetical protein CLOBOL_01428 [Clostridium bolteae ATCC
BAA-613]
gi|158440329|gb|EDP18074.1| hypothetical protein CLOBOL_01428 [Clostridium bolteae ATCC
BAA-613]
Length = 317
Score = 42.1 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 15/173 (8%)
Query: 181 LDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC------LGEHEFENYAARSVGRIISAVR 234
+ ++D + + G+D I AG + EFE Y +I+ A
Sbjct: 149 MKRIADGLCQLAGKFVELGLDGILY----AGLGGERFLFTDQEFEEYIMPFDKQIMKACL 204
Query: 235 RKYPNAKFISFAKGAGY-MLKNYRRL-TDSNAIGLDWSVPLSFALELQKEGPVQGNLDPM 292
+ + +Y+ L + +N + + L+ + + + G L
Sbjct: 205 EAGGHNILHMCKTDVNFDRYDSYKGLYSIANWGIYETGMSLAEGRKRFADCAIMGGLSNH 264
Query: 293 ---RLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVR 342
+ + V ++ G FI I V + + + ++
Sbjct: 265 KGPLIEGTPDEIRQEVRRVMAEAGETGFILGTDCTIPMGVPYERMRIAAEAIK 317
>gi|325262258|ref|ZP_08128996.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324033712|gb|EGB94989.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 423
Score = 41.8 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 49/143 (34%), Gaps = 20/143 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F + ++ ++ V + + K+ +F G ++ ++ G+D P+
Sbjct: 279 SRDLFREFYKDNMKKVNDWV---HTHTKWKTFYHSCGSIVNFLDDFAEA---GVDILNPV 332
Query: 274 SFALELQKEGPVQ-----------GNLDPMRL--VVGNQVMIDGVNAILDVL-GSGPFIF 319
+ ++ G +D ++ + +I L++ G F+
Sbjct: 333 QVSAAGMDAVMLKEKYGDKFTFWGGAVDTQQVLPFGTPEEVIAQTQERLEIFSKGGGFVC 392
Query: 320 NLGHGITPQVDPKNVLDLVKTVR 342
+ H I P +N+ T+
Sbjct: 393 SAIHNIQPNTPVENICAFYDTIH 415
>gi|187250939|ref|YP_001875421.1| peptidase T [Elusimicrobium minutum Pei191]
gi|186971099|gb|ACC98084.1| Peptidase [Elusimicrobium minutum Pei191]
Length = 408
Score = 41.8 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 160 IKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFE 219
+ + + +N A N LL L D+ +Y I+QI G D ++ + G + F
Sbjct: 320 SEQYRNMKDVLAKNPEAMNKLLSALEDMGIKYKISQIRGGTDGARL--SFMGLPTPNIFA 377
Query: 220 NYAARS 225
Y+
Sbjct: 378 GYSQPH 383
>gi|169641167|gb|ACA61307.1| HemE [Caulobacter sp. FWC18]
Length = 34
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQA 28
+++ K L L G PP+W MRQA
Sbjct: 8 SQQTVKFLSALSGETHANPPVWFMRQA 34
>gi|89897446|ref|YP_520933.1| hypothetical protein DSY4700 [Desulfitobacterium hafniense Y51]
gi|219670612|ref|YP_002461047.1| hypothetical protein Dhaf_4610 [Desulfitobacterium hafniense DCB-2]
gi|89336894|dbj|BAE86489.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540872|gb|ACL22611.1| hypothetical protein Dhaf_4610 [Desulfitobacterium hafniense DCB-2]
Length = 325
Score = 41.8 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 47/162 (29%), Gaps = 19/162 (11%)
Query: 171 YQNSRAFNWLLDFLSD---VSAEYLIAQIHAGVDVIQIF--DTHAGC----LGEHEFENY 221
Y+ + L+D+L++ AE + ++ +F D + FE +
Sbjct: 138 YEEPELMHELIDYLTEYELKLAEIICRRLKPDA----LFHHDDWGSQKSSFISPAMFEEF 193
Query: 222 AARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG--LDWSVPLSFALEL 279
+ +I S ++ + + L + + + + +
Sbjct: 194 YLPAYKKIYSFYKQNGVEL-IVHHSDCYAANLVPFMIEMGIDIWQGVMTTNNTPELIKQY 252
Query: 280 QKEGPVQGNLDPMRLVVG---NQVMIDGVNAILDVLGSGPFI 318
+ G++D + ++ G FI
Sbjct: 253 GGKISFMGDIDSGVVDFPTWTREIAAREAERACTNCGKHYFI 294
>gi|325262004|ref|ZP_08128742.1| hypothetical protein HMPREF0240_00985 [Clostridium sp. D5]
gi|324033458|gb|EGB94735.1| hypothetical protein HMPREF0240_00985 [Clostridium sp. D5]
Length = 358
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 8/126 (6%)
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG----- 266
+ F + ++I +++ F G +K D+ G
Sbjct: 213 MISPDCFREFVGNYYRKLIPLLKKYGCGN---VFVDTDGDFMKLIPEFVDAGVDGFLPMD 269
Query: 267 LDWSVPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGPFIFNLGHGIT 326
++ + + + + G + +R+ G + + + IL V+ G +I H +
Sbjct: 270 VNAGMDIVAVRDEFPKLKFAGGYNKLRIAEGPEAIDREFDRILPVIRQGGYIPGADHQVA 329
Query: 327 PQVDPK 332
P +
Sbjct: 330 PSTPLE 335
>gi|310825920|ref|YP_003958277.1| hypothetical protein ELI_0295 [Eubacterium limosum KIST612]
gi|308737654|gb|ADO35314.1| hypothetical protein ELI_0295 [Eubacterium limosum KIST612]
Length = 386
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 23/143 (16%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
+F+ + + +++ + K K G + + L + ++ P
Sbjct: 251 PKDFDQFWWPTFKKLMDYIAEKNVGVK-AFVEHDWGDKIDHLGELGNRVEFQFEYGDPQK 309
Query: 275 FALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVD- 330
L + + G L P+ L+ + D A+LDVL G +IFN D
Sbjct: 310 IKQTLGNKHIISG-LYPITLLQTGTEKECTDKAKALLDVLALDGGYIFN--------TDK 360
Query: 331 ---------PKNVLDLVKTVRSE 344
N+ +++TV++
Sbjct: 361 TIYSLEGKIADNLKAVIETVKTY 383
>gi|300855238|ref|YP_003780222.1| putative uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
gi|300435353|gb|ADK15120.1| putative Uroporphyrinogen-III decarboxylase-like protein
[Clostridium ljungdahlii DSM 13528]
Length = 380
Score = 41.8 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 60/392 (15%), Positives = 115/392 (29%), Gaps = 77/392 (19%)
Query: 1 MNE-RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELT 59
M E R ++++ L + PI+L Q Y D PE E
Sbjct: 6 MTEIRNKRVMAALNMEKTDRIPIFLSGQM------YYNFIDPTMTIADYWRRPELVDEKL 59
Query: 60 LQPIRRYNFD--------------------AAILFSDILVIADALGRNVRF-VENEGPR- 97
++ D AA+ F+ + V LG NV + ++ +GP
Sbjct: 60 IEAAELPILDEMDSAPTCTGIPMETFLQSFAAMWFAKMKVPGRELGDNVLWQIDEQGPMT 119
Query: 98 ---MDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH---------ITLIGFCG 145
D I + + + + Y + + + + T +G G
Sbjct: 120 EEDYDTIIDKGWEYMKKELYNRIGYHP---EELPQMDMEYAGKLQKRIASLGKTTVGMSG 176
Query: 146 A-----PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHA-- 198
P+ S + + Y+ LD + + E + + A
Sbjct: 177 GLLPIPPFETLS------GARKLSKFFRDLYRVPDKVRAALDVMEEAELENTVKAMKAMP 230
Query: 199 -------GVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG- 250
G F + FE + +++ +++ N K G
Sbjct: 231 GVYGFIGGSRCGCDF------ISPKIFEKFYFTYHQKLVPVMQQN--NVKTWFHMDGNWE 282
Query: 251 YMLKNYRRLTDSNAI-GLDWSVPLSFALE-LQKEGPVQGNLDPMRL-VVGNQVMIDGVNA 307
L +R + I D + E L + + GN+ P V +
Sbjct: 283 AFLPYFREFPKAQCIWDPDHVTDIRKIKEILGDKMCITGNVPPALTSVGKPEDCYKYAKD 342
Query: 308 ILDVLG-SGPFIFNLGHGITPQVDPKNVLDLV 338
++++ FI N + P KN+ ++
Sbjct: 343 LVELFKDHDGFIMNSACSVPPNAKQKNIEAVI 374
>gi|332982106|ref|YP_004463547.1| hypothetical protein Mahau_1536 [Mahella australiensis 50-1 BON]
gi|332699784|gb|AEE96725.1| hypothetical protein Mahau_1536 [Mahella australiensis 50-1 BON]
Length = 386
Score = 41.4 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 66/178 (37%), Gaps = 21/178 (11%)
Query: 170 AYQNSRAFNWLLDF---LSDVSAEYLIAQIHAGVDVIQIFD----THAGCLGEHEFENYA 222
Y + ++ L+D Q + +D I + H + + Y
Sbjct: 198 FYDQPELIHSCMETWFNLADSIIA--KHQQYVTIDEFYIGEDICYNHGPLISPDMIKEYL 255
Query: 223 ARSVGRIISAVR-RKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFAL---- 277
++IS ++ R+ + + F + L IG+D+ P A
Sbjct: 256 FPYYQQLISNIKARQIDKNRHLYFQVDTDGYAASVIPL--YKDIGMDYMSPFEVASGCDV 313
Query: 278 -ELQKEGP---VQGNLDPMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVD 330
E+ K+ P ++G +D L G + V++IL ++ G +I HG+ +VD
Sbjct: 314 IEIGKQYPDLLIRGGIDKRELARGKNAIDKLVDSILPIMKKRGGYIPTCDHGVPAEVD 371
>gi|238928190|ref|ZP_04659950.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
gi|238884150|gb|EEQ47788.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
Length = 335
Score = 41.4 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 43/235 (18%), Positives = 75/235 (31%), Gaps = 18/235 (7%)
Query: 96 PRMDPITT-QEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM 154
P + T +E+ + P D + I + + K+ N + T +M
Sbjct: 77 PVVQTARTAKELAKVQPLPDDHPFFTRQIAYA-KEITKRYGNEVATFYNLFCAGTTVKFM 135
Query: 155 ISGGFIKDHGQNRVFAYQNSRAFNWLLDFLS-DVSAEYLIAQIHAGVDVI--QIFDTHAG 211
G +D +++ A D +S D++ AGV I + +
Sbjct: 136 QPGTLAEDEAFLAQLVREDAAAVRAAFDVISGDLAKLARRIIAEAGVTGIYFSLQNLIGE 195
Query: 212 CLGEHEFENYAARSVGRII-SAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS 270
+E A I+ +A N I G L YR D + ++W+
Sbjct: 196 GASRAVYEEVFAPGEKEILRAANAASSYNILHICGYAGHRNALDWYR---DYDVKTINWA 252
Query: 271 -----VPLSFALELQKEGPVQG---NLDPMRLV-VGNQVMIDGVNAILDVLGSGP 316
VPL ++ + + G NL L + + ILD G
Sbjct: 253 AVVEGVPLEEGRKIFPQHALLGGFGNLASDVLYRGTQEEITSETQRILDAAGRTG 307
>gi|255528565|ref|ZP_05395340.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
gi|255507740|gb|EET84205.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
Length = 325
Score = 41.4 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 41/159 (25%), Gaps = 13/159 (8%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF--DTHAGC----LGEHEFENYAAR 224
Y+ A + L+D ++ + + + IF D + FE +
Sbjct: 138 YEEPEAMHELIDAITQYELDAAKVIVEK-LHPDCIFHHDDWGSQKNSFVSPAMFEEFFLP 196
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG--LDWSVPLSFALELQKE 282
+ +I + + + L Y + ++ + + +
Sbjct: 197 AYKKIYGFYKANGVEL-IVHHSDSYAANLVPYMIEMGIDIWQGVMNTNNIPELIKQYGGK 255
Query: 283 GPVQGNLDPMRLVVG---NQVMIDGVNAILDVLGSGPFI 318
G L + + V G FI
Sbjct: 256 ISFMGGLHSGLIDFPDWTPENCTKHVEEACKANGKKYFI 294
>gi|302337693|ref|YP_003802899.1| uroporphyrinogen-III decarboxylase-like protein [Spirochaeta
smaragdinae DSM 11293]
gi|301634878|gb|ADK80305.1| uroporphyrinogen-III decarboxylase-like protein [Spirochaeta
smaragdinae DSM 11293]
Length = 385
Score = 41.0 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 23/183 (12%)
Query: 173 NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI---FDTHAG----CLGEHEFENYAARS 225
N ++LD ++D+ E + AG D+I + +D A + + + +
Sbjct: 202 NPDMVEYMLDRITDILCEVTERALSAGGDLIDMVYFYDDVASNSNLLISKDMWNQFIRPR 261
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALE-----LQ 280
+II AV ++Y + +L + + + AL
Sbjct: 262 HEKII-AVAKRYDKSIMYHSDGALRMLLPELIDM-GIDVLNPIQPDAAGMALRGLKDDFG 319
Query: 281 KEGPVQGNLD-----PMRLVVGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNV 334
G +D P + V + +LG G +I H I +NV
Sbjct: 320 DRLCFHGGIDIKETLPK---GSVDDVRAEVADRIGILGERGGYIMASSHHIQSDTPLENV 376
Query: 335 LDL 337
L +
Sbjct: 377 LAM 379
>gi|169641165|gb|ACA61306.1| HemE [Caulobacter sp. FWC17]
Length = 35
Score = 41.0 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 6 QKILEVLQGNVINPPPIWLMRQA 28
K L L G PPIW MRQA
Sbjct: 13 PKFLSALSGEKHANPPIWFMRQA 35
>gi|325264735|ref|ZP_08131464.1| hypothetical protein HMPREF0240_03744 [Clostridium sp. D5]
gi|324030027|gb|EGB91313.1| hypothetical protein HMPREF0240_03744 [Clostridium sp. D5]
Length = 414
Score = 41.0 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 10/137 (7%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSV-- 271
+ + ++ V+ F+ M+ + + + I +
Sbjct: 273 NPELYRKFFKDGHRQMFRYVKEHSNMKTFLHSCGSIYRMIPDLID-SGLDIINPVQTSCF 331
Query: 272 ---PLSFALELQKEGPV-QGNLDPMRLV--VGNQVMIDGVNAILDVL-GSGPFIFNLGHG 324
P E K+ G D + L+ Q + D V LD+ G ++FN H
Sbjct: 332 EMEPERLKREFGKDITFWGGGADVVSLLNNGTPQQVKDDVKRRLDIFMKDGGYVFNSIHN 391
Query: 325 ITPQVDPKNVLDLVKTV 341
+ P +N++ + + V
Sbjct: 392 LMPDHKAENIIAMYEAV 408
>gi|89897502|ref|YP_520989.1| hypothetical protein DSY4756 [Desulfitobacterium hafniense Y51]
gi|89336950|dbj|BAE86545.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 382
Score = 40.6 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 49/198 (24%), Gaps = 17/198 (8%)
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI--AQIHAG-VDVIQIFDTHAGC----LGE 215
+D L + EY +++ G VDV D +
Sbjct: 183 FENWFAMLLTEPERCTLFMDKLLEKKKEYYDHIFEVYGGLVDVCSEADDFGTQRGTFVSP 242
Query: 216 HEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA-----IGLDWS 270
++ ++ K + + + + I
Sbjct: 243 KLIREMILPYHKKLNDYLKAKGAGYMTLHSCGSVEASIPDIIE-AGFDCLNPVQISAANM 301
Query: 271 VPLSFALELQKEGPVQG---NLDPMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGIT 326
P K+ G N + + + +D G F+F H +
Sbjct: 302 SPEHLKKSYGKDITFWGGGINTQSTLPNGTPEQVREETKRNIDAFARDGGFVFATVHNVQ 361
Query: 327 PQVDPKNVLDLVKTVRSE 344
V +N + + +T +
Sbjct: 362 DDVPIENFIAMWETFQDH 379
>gi|255007660|ref|ZP_05279786.1| methyltransferase [Bacteroides fragilis 3_1_12]
gi|313145354|ref|ZP_07807547.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313134121|gb|EFR51481.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 417
Score = 40.6 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 53/188 (28%), Gaps = 31/188 (16%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
+ + L D + V G Q F R+
Sbjct: 247 NYEKLWAALGDKIEVVLTCGTDF----GSQESQF-------CSIDTFRELWLPHYRRMND 295
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQ----- 286
+ + + + F G ++ G D P+ + ++
Sbjct: 296 WI---HQHTTWKIFKHSCGAIIPIL---PGLIEAGFDIINPVQINAKDMDSRRLKEEFGS 349
Query: 287 ------GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDL 337
G +D ++ + V ++LG G F+FN H I V +NV+ +
Sbjct: 350 RLTFWGGGVDTQKILPFGTPDEIRRHVKEQCEILGRDGGFVFNAVHNIQANVPVENVVAM 409
Query: 338 VKTVRSEK 345
++ +
Sbjct: 410 FDALKDFR 417
>gi|219670643|ref|YP_002461078.1| uroporphyrinogen-III decarboxylase [Desulfitobacterium hafniense
DCB-2]
gi|219540903|gb|ACL22642.1| Uroporphyrinogen-III decarboxylase-like protein [Desulfitobacterium
hafniense DCB-2]
Length = 382
Score = 40.6 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 23/198 (11%), Positives = 49/198 (24%), Gaps = 17/198 (8%)
Query: 163 HGQNRVFAYQNSRAFNWLLDFLSDVSAEYLI--AQIHAG-VDVIQIFDTHAGC----LGE 215
+D L + EY +++ G VDV D +
Sbjct: 183 FENWFAMLLTEPERCTLFMDKLLEKKKEYYDHIFEVYGGLVDVCSEADDFGTQRGTFVSP 242
Query: 216 HEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA-----IGLDWS 270
++ ++ K + + + + I
Sbjct: 243 KLIREMILPYHKKLNDYLKAKGAGYMTLHSCGSVEASIPDIIE-AGFDCLNPVQISAANM 301
Query: 271 VPLSFALELQKEGPVQG---NLDPMRLVVGNQVMIDGVNAILDVLGS-GPFIFNLGHGIT 326
P K+ G N + + + +D G F+F H +
Sbjct: 302 SPEHLKKTYGKDITFWGGGINTQSTLPNGTPEQVREETKRNIDAFARDGGFVFATVHNVQ 361
Query: 327 PQVDPKNVLDLVKTVRSE 344
V +N + + +T +
Sbjct: 362 DDVPIENFIAMWETFQDH 379
>gi|169641163|gb|ACA61305.1| HemE [Caulobacter sp. FWC42]
Length = 34
Score = 40.2 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 2 NERKQKILEVLQGNVINPPPIWLMRQA 28
+ K L LQG PP+W MRQA
Sbjct: 8 SRPTPKFLSALQGQRHANPPVWFMRQA 34
>gi|169641169|gb|ACA61308.1| HemE [Caulobacter sp. MCS18]
Length = 28
Score = 40.2 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQA 28
M ++ +L VL G PPP+WLMRQA
Sbjct: 1 MLTPQKPLLAVLAGETRTPPPVWLMRQA 28
>gi|325263417|ref|ZP_08130151.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324031126|gb|EGB92407.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 348
Score = 40.2 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 40/255 (15%)
Query: 115 LFLNYLLPIFQSISILRKKL---------PNHITLIGFCGAPWTVASYMISGGFIKDHGQ 165
Y P+ + LRK+L + + GF M + +
Sbjct: 98 EESTYEFPVCDELR-LRKELEELTADKEKDDRFIMYGFG-------FLMFERAWSLMGIE 149
Query: 166 NRVFAYQ-NSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFEN 220
N + L + D + + +D + D +G + +
Sbjct: 150 NTLCNMILYPEEMEELFTKIGDYYCHLVDIALEYDLDGVYFGDDWGQQKGLIMGLEHWRH 209
Query: 221 YAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWS--VPLSFALE 278
Y + R+ V+ K + + + + E
Sbjct: 210 YIKPQMARLYKKVKDKGLFV-MQHSCGDCHELFPELIEI-GLDCYQTFQPEVYDIYKMKE 267
Query: 279 L-QKEGPVQGNLDPMRL--VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITP------QV 329
L + G + ++ + + + I L +G G I P V
Sbjct: 268 LYGDKLTFWGGISTQQVLPFASPEEVKEEAIRIYRALHTGG-----GQIIAPTHALAFDV 322
Query: 330 DPKNVLDLVKTVRSE 344
P+N+L L++ + +
Sbjct: 323 PPENILALLEVFKGQ 337
>gi|38147029|gb|AAC83696.2| vanillate:corrinoid protein methyltransferase [Acetobacterium
dehalogenans]
Length = 326
Score = 40.2 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 9/157 (5%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGV-DVIQIFDTHAGC----LGEHEFENYAARS 225
Y+ A + L+D+L D I D + D + FE + +
Sbjct: 139 YEEPEAMHELIDYLVDFELRLAKEFIKHLHPDAVFHHDDWGSQINSFISPAMFEEFFEPA 198
Query: 226 VGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT-DSNAIGLDWSVPLSFALELQKEGP 284
+I + A ++ + + D ++ + + ++
Sbjct: 199 YKKIYGYYKENGVELIIHHSDSYAANLVPSMIEMGIDIWQGVMNTNNIPELIKQYGEKIT 258
Query: 285 VQGNLDPMRLVVG---NQVMIDGVNAILDVLGSGPFI 318
G + + +++ + V G FI
Sbjct: 259 FMGGIHSGLVDFPTWTPEIVAEYVEKTCQENGKLHFI 295
>gi|220932132|ref|YP_002509040.1| Uroporphyrinogen-III decarboxylase [Halothermothrix orenii H 168]
gi|219993442|gb|ACL70045.1| Uroporphyrinogen-III decarboxylase [Halothermothrix orenii H 168]
Length = 380
Score = 39.8 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 25/218 (11%)
Query: 141 IGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGV 200
I P T M+ F F L + +++ + +
Sbjct: 167 IATLTGPLTPIQLML--QFYVGVANTTYFLMDYKDEMENLFSEIHNLNRDIYRVMAESPA 224
Query: 201 DVIQIF-DTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL 259
+VI + DT L +E Y + + + I G + L
Sbjct: 225 EVIITYEDTSTTVLSPAWYEQYCKKELDEYADIIHDYNK----IFITHMCGKLSLLTDTL 280
Query: 260 TDSNAIGLDWSVPLS-------FALELQKEGPVQGNLDPMRLV-VGNQVMIDGVNAILDV 311
+ G+D P + ALE + + G L+P LV + + + L
Sbjct: 281 AEGKMDGIDSVCPPTTGDLEPGDALEETGKIII-GGLEPAALVRMNVEETREYTLEKLKQ 339
Query: 312 LGSGP-FIFNLG----HGITPQVDPKNVLDLVKTVRSE 344
+G+G FI + G +G +N+ + + ++
Sbjct: 340 VGTGRNFILSTGDSTAYG----TPLENLKAITRVIKEY 373
>gi|312136118|ref|YP_004003456.1| hypothetical protein Calow_2148 [Caldicellulosiruptor owensensis
OL]
gi|311776169|gb|ADQ05656.1| hypothetical protein Calow_2148 [Caldicellulosiruptor owensensis
OL]
Length = 372
Score = 39.8 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 56/174 (32%), Gaps = 20/174 (11%)
Query: 174 SRAFNWLLDFLSDVSAEYLIAQIHA-------GVDVIQIFDTHAGCLGEHEFENYAARSV 226
+ ++++++D S + + + G + I F+ + + F+ +
Sbjct: 191 PDLVDEMIEYMTDFSIKLMEKALKDVEVDFALGWEDI-AFN-NGPIISPQMFKEFLMPRY 248
Query: 227 GRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSN---AIGLDWSVPLSFALEL-QKE 282
RI + + + + G + N + + +L
Sbjct: 249 KRIADFLHKHGVDI-IGTDCDGNIMPIVELWLEAGFNLMFPVEVHAGTDPVVLKKLYGDS 307
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNA---ILDVLGSGPFIFNLGHGITPQVDPKN 333
+ G +D +L + ++ + +++ G P I H P V +N
Sbjct: 308 IRLMGGVDKTKLQDSKEDILKELKRLEKVVEQGGFIPHI---DHRCPPDVPYEN 358
>gi|300853945|ref|YP_003778929.1| putative corrinoid protein methyltransferase [Clostridium
ljungdahlii DSM 13528]
gi|300434060|gb|ADK13827.1| predicted corrinoid protein methyltransferase [Clostridium
ljungdahlii DSM 13528]
Length = 325
Score = 39.8 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 15/154 (9%), Positives = 43/154 (27%), Gaps = 10/154 (6%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF--DTHAGC----LGEHEFENYAAR 224
Y+ A + L+D L+ + + + IF D + FE +
Sbjct: 138 YEEPEAMHELIDALTQYELDVAKVIVEK-LHPDCIFHHDDWGSQKNSFVAPKMFEEFFLP 196
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG--LDWSVPLSFALELQKE 282
+ +I + + + L Y + ++ + + +
Sbjct: 197 AYKKIYGYYKANGVEL-IVHHSDSYAANLVPYMIEMGIDIWQGVMNTNNIPELIKQYGGK 255
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
G L + + + + + + + +
Sbjct: 256 ISFMGGLHSGLIDFPDWTLENCIKHVEEACKANG 289
>gi|300853940|ref|YP_003778924.1| putative corrinoid protein methyltransferase [Clostridium
ljungdahlii DSM 13528]
gi|300434055|gb|ADK13822.1| predicted corrinoid protein methyltransferase [Clostridium
ljungdahlii DSM 13528]
Length = 325
Score = 39.8 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 15/154 (9%), Positives = 43/154 (27%), Gaps = 10/154 (6%)
Query: 171 YQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIF--DTHAGC----LGEHEFENYAAR 224
Y+ A + L+D L+ + + + IF D + FE +
Sbjct: 138 YEEPEAMHELIDALTQYELDVAKVIVEK-LHPDCIFHHDDWGSQKNSFVAPKMFEEFFLP 196
Query: 225 SVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIG--LDWSVPLSFALELQKE 282
+ +I + + + L Y + ++ + + +
Sbjct: 197 AYKKIYGYYKANGVEL-IVHHSDSYAANLVPYMIEMGIDIWQGVMNTNNIPELIKQYGGK 255
Query: 283 GPVQGNLDPMRLVVGNQVMIDGVNAILDVLGSGP 316
G L + + + + + + + +
Sbjct: 256 ISFMGGLHSGLIDFPDWTLENCIKHVEEACKANG 289
>gi|195475162|ref|XP_002089853.1| GE21984 [Drosophila yakuba]
gi|194175954|gb|EDW89565.1| GE21984 [Drosophila yakuba]
Length = 1197
Score = 39.8 bits (92), Expect = 0.65, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 750 VKAGTHVLCIKD-MAGLLKPEA--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 800
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 801 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 846
>gi|310826618|ref|YP_003958975.1| hypothetical protein ELI_1024 [Eubacterium limosum KIST612]
gi|308738352|gb|ADO36012.1| hypothetical protein ELI_1024 [Eubacterium limosum KIST612]
Length = 385
Score = 39.8 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
E +FE + + +++ + + N I L R L + ++ P
Sbjct: 250 EKDFERFYWPTFKKLVEELVKTNTNVS-IFLEHDFTRFLDYIRELPAGCQLMAEFGDPKV 308
Query: 275 FALELQKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVLG-SGPFIFNLGHGIT--PQV 329
F +L + + G P+ ++ + D I+D+L G +IF+L I V
Sbjct: 309 FKEKLGDKFILTG-FYPLAMLKTGTLNEIQDKAKEIIDILAPGGRYIFSLDKSILRVSDV 367
Query: 330 DPKNVLDLVKTVRSEKI 346
+ L++ V+ +
Sbjct: 368 EIDKYQALLRFVKEYAV 384
>gi|194858260|ref|XP_001969139.1| GG25254 [Drosophila erecta]
gi|190661006|gb|EDV58198.1| GG25254 [Drosophila erecta]
Length = 1197
Score = 39.8 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 750 VKAGTHVLCIKD-MAGLLKPEA--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 800
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 801 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 846
>gi|83590164|ref|YP_430173.1| hypothetical protein Moth_1317 [Moorella thermoacetica ATCC 39073]
gi|83573078|gb|ABC19630.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 390
Score = 39.8 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 74/224 (33%), Gaps = 14/224 (6%)
Query: 132 KKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+KL ++ + T A + G ++ + + + + + Y
Sbjct: 171 EKLAKEYGIVPYVTG-MTKAPFDTLGDALRGMKGILLDLRRRPDKVLAACEAIVPHNIAY 229
Query: 192 LIAQIHAGVDVIQIFDT-HAGC---LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAK 247
AG + +F H G L ++E + S +I + + F FA+
Sbjct: 230 ARI-TAAGDTSLPVFAPLHRGAYPFLSMEQWEKFYWPSWKAVIEGLWAQGKRTFF--FAE 286
Query: 248 GAGY-MLKNYRRLT-DSNAIGLDWSVPLSFALELQKEGPVQGNLDPMRL--VVGNQVMID 303
G L+ L S +D + L + + G + P L + D
Sbjct: 287 GDWTPYLEKIAELPEKSIVFIIDNTDAKKAKKILGGKFCLWGGV-PTTLLTYGTPAQVKD 345
Query: 304 GVNAILDVLG-SGPFIFNLGHGITPQVDPKNVLDLVKTVRSEKI 346
V +D L G F+ G + +N+L +++ R +
Sbjct: 346 CVKQAIDELACDGGFVLAPGGVVLGDAKRENILAMLEAAREYGV 389
>gi|312385557|gb|EFR30026.1| hypothetical protein AND_00634 [Anopheles darlingi]
Length = 975
Score = 39.4 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 528 VKAGTHVLCIKD-MAGLLKPQA--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 578
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-NLD 290
+ ++ A +D ++ + Q +QG NLD
Sbjct: 579 SMLACAEAGADVVDVAIDSMSGMTSQPSMGAIVASLQGTNLD 620
>gi|150389865|ref|YP_001319914.1| hypothetical protein Amet_2095 [Alkaliphilus metalliredigens QYMF]
gi|149949727|gb|ABR48255.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF]
Length = 391
Score = 39.4 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 17/138 (12%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYR-RLTDSNAIGLDWSVPL 273
+FE + + ++ + + F + +Y L ++ + ++ P
Sbjct: 256 PKDFERFYWPTFKTLVDELAAM--GYPSLLFVEHDWTRYIDYLYELPENTRMMFEYGDPK 313
Query: 274 SFALELQKEGPVQGNLDPMRLV--VGNQVMIDGVNAILDVLG-SGPFIFNLGHG-----I 325
+L K+ + G P L+ + ID ++D+L G +IF G I
Sbjct: 314 VIKEKLGKKHILSG-FYPTTLLKTGTKEQCIDKAEELIDILAPGGKYIF----GFDKVII 368
Query: 326 TPQ-VDPKNVLDLVKTVR 342
T V+ N+ +++ VR
Sbjct: 369 TTDSVNLDNLKAVLEYVR 386
>gi|325262667|ref|ZP_08129403.1| hypothetical protein HMPREF0240_01653 [Clostridium sp. D5]
gi|324031761|gb|EGB93040.1| hypothetical protein HMPREF0240_01653 [Clostridium sp. D5]
Length = 381
Score = 39.4 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 19/185 (10%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG---------CLGEHEFENYA 222
+ + N+LLD + D ++ + D I I AG + EF
Sbjct: 186 ADPKFANYLLDMILDYWKAFMGKYLEEVGDYIDIM--WAGDDWGDQSGPLINPVEFRRNV 243
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL----DWSVPLSFALE 278
+I ++ K + L+++ + + + +
Sbjct: 244 GPRFKDLIQFMKTKSNAKLSYHSCGSVTWCLEDFYDW-GVDIVQPLQANAYDMDSKKLKH 302
Query: 279 LQ-KEGPVQGNLDPMRLV-VGNQVMIDGVNAILDVLG-SGPFIFNLGHGITPQVDPKNVL 335
+ + + G L+ + + + + V + G G ++F GH I P+N+L
Sbjct: 303 MTYGKMSLHGGLNNQGVFHLSPEEIRADVRQKICDFGPGGGYLFGSGHNIQANCPPRNIL 362
Query: 336 DLVKT 340
++ +
Sbjct: 363 EIFDS 367
>gi|195582012|ref|XP_002080822.1| GD10045 [Drosophila simulans]
gi|194192831|gb|EDX06407.1| GD10045 [Drosophila simulans]
Length = 508
Score = 39.4 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 61 VKAGTHVLCIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 111
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 112 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 157
>gi|195426988|ref|XP_002061562.1| GK20962 [Drosophila willistoni]
gi|194157647|gb|EDW72548.1| GK20962 [Drosophila willistoni]
Length = 1197
Score = 39.4 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 750 VKAGTHVLCIKD-MAGLLKPEA--------ARLLITAIRDKHPDVPIHIHTHDTSGAGVA 800
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ + A +D +V + Q +QG NLD
Sbjct: 801 SMLACAQAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 846
>gi|19921944|ref|NP_610527.1| CG1516, isoform E [Drosophila melanogaster]
gi|24652210|ref|NP_724837.1| CG1516, isoform A [Drosophila melanogaster]
gi|24652212|ref|NP_724838.1| CG1516, isoform B [Drosophila melanogaster]
gi|24652214|ref|NP_724839.1| CG1516, isoform D [Drosophila melanogaster]
gi|24652216|ref|NP_724840.1| CG1516, isoform G [Drosophila melanogaster]
gi|320543723|ref|NP_001188898.1| CG1516, isoform P [Drosophila melanogaster]
gi|4972690|gb|AAD34740.1| unknown [Drosophila melanogaster]
gi|7303838|gb|AAF58885.1| CG1516, isoform A [Drosophila melanogaster]
gi|7303839|gb|AAF58886.1| CG1516, isoform D [Drosophila melanogaster]
gi|7303840|gb|AAF58887.1| CG1516, isoform B [Drosophila melanogaster]
gi|21645484|gb|AAM71030.1| CG1516, isoform E [Drosophila melanogaster]
gi|21645485|gb|AAM71031.1| CG1516, isoform G [Drosophila melanogaster]
gi|318068558|gb|ADV37146.1| CG1516, isoform P [Drosophila melanogaster]
Length = 1181
Score = 39.4 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 734 VKAGTHVLCIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 784
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 785 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 830
>gi|24652218|ref|NP_724841.1| CG1516, isoform I [Drosophila melanogaster]
gi|24652220|ref|NP_724842.1| CG1516, isoform J [Drosophila melanogaster]
gi|24652222|ref|NP_724843.1| CG1516, isoform K [Drosophila melanogaster]
gi|24652224|ref|NP_724844.1| CG1516, isoform L [Drosophila melanogaster]
gi|281363050|ref|NP_001163103.1| CG1516, isoform M [Drosophila melanogaster]
gi|21645486|gb|AAG22289.2| CG1516, isoform I [Drosophila melanogaster]
gi|21645487|gb|AAM71032.1| CG1516, isoform J [Drosophila melanogaster]
gi|21645488|gb|AAM71033.1| CG1516, isoform K [Drosophila melanogaster]
gi|21645489|gb|AAM71034.1| CG1516, isoform L [Drosophila melanogaster]
gi|272432417|gb|ACZ94380.1| CG1516, isoform M [Drosophila melanogaster]
Length = 1197
Score = 39.4 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 750 VKAGTHVLCIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 800
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 801 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 846
>gi|195359264|ref|XP_002045332.1| GM24372 [Drosophila sechellia]
gi|194127362|gb|EDW49405.1| GM24372 [Drosophila sechellia]
Length = 1197
Score = 39.4 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 750 VKAGTHVLCIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 800
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 801 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 846
>gi|28317240|gb|AAO39627.1| GH03002p [Drosophila melanogaster]
Length = 736
Score = 39.4 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 289 VKAGTHVLCIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 339
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 340 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 385
>gi|189464210|ref|ZP_03012995.1| hypothetical protein BACINT_00547 [Bacteroides intestinalis DSM
17393]
gi|189438000|gb|EDV06985.1| hypothetical protein BACINT_00547 [Bacteroides intestinalis DSM
17393]
Length = 418
Score = 39.4 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F+ R+ + + + + F G ++ G D P+
Sbjct: 278 SLDTFKELWLPHYRRMNDWI---HQHTTWKVFKHSCGAIIPIL---PGLIEAGFDIINPV 331
Query: 274 SFALELQKEGPV------Q-----GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
+ + Q G +D ++ + V ++LG G FIF
Sbjct: 332 QINAKDMDSHRLKEEFGSQLTFWGGGIDTQQILPFGTPDEIRRHVIGQCEILGRDGGFIF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ L T++S
Sbjct: 392 NAVHNIQANVPIENVVALFDTLKS 415
>gi|317477143|ref|ZP_07936384.1| methyltransferase [Bacteroides eggerthii 1_2_48FAA]
gi|316906686|gb|EFV28399.1| methyltransferase [Bacteroides eggerthii 1_2_48FAA]
Length = 418
Score = 39.4 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F+ R+ + + + + F G ++ G D P+
Sbjct: 278 SLDTFKELWLPHYRRMNDWI---HQHTTWKVFKHSCGAIIPIL---PGLIEAGFDIINPV 331
Query: 274 SFALELQKEGPV------Q-----GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
+ + Q G +D ++ + V ++LG G FIF
Sbjct: 332 QINAKDMDSHRLKEEFGSQLTFWGGGIDTQQILPFGTPDEIRRHVIGQCEILGRDGGFIF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ L T++S
Sbjct: 392 NAVHNIQANVPIENVVALFDTLKS 415
>gi|295102155|emb|CBK99700.1| Signal transduction histidine kinase [Faecalibacterium prausnitzii
L2-6]
Length = 389
Score = 39.1 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 20/217 (9%)
Query: 32 LPEYRQIRKKFKNFLDMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFV 91
LPE+RQ+ + F L+ R++ +AA ++ + +
Sbjct: 137 LPEFRQLSRSFNQMLERLNNAFAA-------QRQFTGNAA---HELRTPLALMQAQLELF 186
Query: 92 ENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVA 151
E P + P T + + LL + + + ++ + + L +T
Sbjct: 187 SAEHPDVRPETVEFLTLLREQTERLTQMTKTLLEMSNLQQVARNEQLQLAPMVEEIFTDL 246
Query: 152 SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY------LIAQIHAGVD--VI 203
+ + I + + LL L++ + +Y + ++ G + +I
Sbjct: 247 APLAEKRSISLEAEGDAALTGSDALIYRLLFNLTENAVKYNRPGGSVRVELAQGQEKCII 306
Query: 204 QIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNA 240
++ DT G E++ R+ + R+Y
Sbjct: 307 RVSDTGCGI--PEEYQRSIFHPFFRVDKSRSREYGGV 341
>gi|60682374|ref|YP_212518.1| putative methyltransferase [Bacteroides fragilis NCTC 9343]
gi|60493808|emb|CAH08598.1| putative methyltransferase [Bacteroides fragilis NCTC 9343]
Length = 416
Score = 39.1 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F R+ + + + + F G ++ G D P+
Sbjct: 278 SVEVFNELWLPHYRRMNDWI---HEHTTWKVFKHSCGAIVPIL---PGLIKAGFDIINPV 331
Query: 274 SFALELQKEGPVQ-----------GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
+ G ++ G +D ++ + V ++LG G F+F
Sbjct: 332 QINAKDMDSGMLKREFGSHLTFWGGGVDTQKMLPFGTPDEIRRHVLGQCEILGKDGGFVF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ ++ +++
Sbjct: 392 NSVHNIQANVPVENVIAMLDALKT 415
>gi|310826615|ref|YP_003958972.1| hypothetical protein ELI_1021 [Eubacterium limosum KIST612]
gi|308738349|gb|ADO36009.1| hypothetical protein ELI_1021 [Eubacterium limosum KIST612]
Length = 385
Score = 39.1 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 90/279 (32%), Gaps = 26/279 (9%)
Query: 79 VIADALGRNVR-FVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
+IAD V + +DP L + + + PI + + +K
Sbjct: 117 LIADPFKCIVDRILPRVYKALDPANGSSSVSLVRAMSIQNDMNTPILMEAARVSQKYGLP 176
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNW-------LLDFLSDVSAE 190
+T G AP + MI G + + L+D L+
Sbjct: 177 LTGGGLVEAPMDYIADMIRG-----FSAITMDIRRQPEKVAAAAEAVMPLMDRLAAQLPA 231
Query: 191 YLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
+ + + +F + E +F S ++ + + + I F
Sbjct: 232 VPGKLVSMPLHMP-VF------MREKDFAKLWWPSFKELVERMAARGQYMR-IYFEGDWT 283
Query: 251 YMLKNYRRLTDSNAIGLDWSVPLSFAL-ELQKEGPVQGNLDPMRL-VVGNQVMIDGVNAI 308
+ L +G+ + A +L K + G D L Q +ID
Sbjct: 284 RYYDYLQDLPKGRILGVFEYMDHQLAKDKLGKVMCITGGYDVSLLQYGTRQAVIDEAKKQ 343
Query: 309 LDVLG-SGPFIFNLGHGIT-P-QVDPKNVLDLVKTVRSE 344
+D+L G +IF + GIT P P+NV L + V
Sbjct: 344 MDILAPGGGYIFTVSKGITYPNDGTPENVKALYEFVEEY 382
>gi|291458422|ref|ZP_06597812.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418955|gb|EFE92674.1| conserved hypothetical protein [Oribacterium sp. oral taxon 078
str. F0262]
Length = 383
Score = 39.1 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 18/255 (7%)
Query: 79 VIADALGRNVRFVENEGPRMDP-ITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNH 137
V D + P MD + T E L +I ++ + + L++ +
Sbjct: 61 VEPDMMKFMSEGFMGYPPVMDNALRTGEDLLRIRSIGPDHPWITEQIKYVKRLQELFGDK 120
Query: 138 ITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWL-LDFLSDVSAEYLIAQI 196
+ AP V + + KD+ + A + ++ D+
Sbjct: 121 VMTFYNIFAPLQVIRIRLDF-YDKDYERFAALAESFPEELHAAGMEIQKDIKLLVSRLLT 179
Query: 197 HAGVD----VIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR--KYPNAKFISFAKGAG 250
G+D +Q + +E + ++ + + Y ++
Sbjct: 180 ETGLDGIYYCVQNIQS--KRYTREMYERIVRPTEIEVLESANQFSDYNILHICGYSHHTN 237
Query: 251 YM--LKNYRRLTDSNAIGLDWSVPLSFALELQKEGPVQGNLD--PMRLV--VGNQVMIDG 304
+ ++Y N + + +L V G D P L+ + +
Sbjct: 238 QLCFYQDYEAKA-YNWATFTEGISIEEGRKLFPGKCVLGGFDNNPETLIDSGSREEICAF 296
Query: 305 VNAILDVLGSGPFIF 319
VN ++ G +I
Sbjct: 297 VNRLIRENGHRGYIM 311
>gi|301058928|ref|ZP_07199897.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300446924|gb|EFK10720.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 271
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 18/180 (10%)
Query: 1 MNERKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQI--RKKFKNFLDMCYTPEYTVEL 58
M + L ++ P+ ++P R + R + + P
Sbjct: 1 MATGRDLFNRFLNNEPMDR-PV--------FVPMIRGLLSRVEGLPLEQLMNDPTLWANA 51
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
++ + + FD ++ D+ ++A+A G + + E+ P P P +
Sbjct: 52 LVKTHKLFRFDGVVVGLDVTLMAEACGCEIVWEEDR-PVASPPVNG--LYEKPEETGRMK 108
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVFAYQNSRAF 177
+ L + + + + N I P T+A G G+ + Q + AF
Sbjct: 109 HALEVASRVFEVTR---NEQASIAALTGPLTLADMCFGRGKGAAHLGEIKQLMVQVAEAF 165
>gi|325261192|ref|ZP_08127930.1| putative methylcobamide:CoM methyltransferase isozyme M
[Clostridium sp. D5]
gi|324032646|gb|EGB93923.1| putative methylcobamide:CoM methyltransferase isozyme M
[Clostridium sp. D5]
Length = 367
Score = 39.1 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/154 (10%), Positives = 35/154 (22%), Gaps = 20/154 (12%)
Query: 173 NSRAFNWLLDFLSDV-SAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVG 227
+ L L+D + D I + D F +
Sbjct: 180 YPDEVHCLFQKLADYYMRIMERVKEETDADAIFVTDDIGTQSGPFFSLDIFREFFKPYYK 239
Query: 228 RIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL--DWSVPLSF-ALELQKEGP 284
++I + F G + + I +++ A + +
Sbjct: 240 QMID--KAHSLGMHFWLHTCGNIELYMEDFIEIGLDVIHPIQKYTMDYQEIAKKYGDKIC 297
Query: 285 ------VQGNLDPMRLVVGNQVMIDGVNAILDVL 312
VQ + + V ++D
Sbjct: 298 LLVGFDVQ----QTIPFGTPEEVRQEVRDLIDTF 327
>gi|225164555|ref|ZP_03726805.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|224800839|gb|EEG19185.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 119
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 295 VVGNQVMIDGVNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
++ A+L++ SG +IF+L H + N++ ++ R++
Sbjct: 57 YGTVADVVSESRALLEMGRSGNYIFSLSHAVEGDTSMDNIIAFIREARAQS 107
>gi|157093055|gb|ABV22182.1| unknown [Perkinsus marinus]
Length = 36
Score = 38.7 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 318 IFNLGHGITPQVDPKNVLDLVKTVR 342
I NLGHG+ + P+ + ++
Sbjct: 11 IANLGHGMMLDMSPEMAASFIDVIK 35
>gi|170781334|ref|YP_001709666.1| putative glucosidase [Clavibacter michiganensis subsp. sepedonicus]
gi|169155902|emb|CAQ01032.1| putative glucosidase [Clavibacter michiganensis subsp. sepedonicus]
Length = 416
Score = 38.7 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-DWSVPLSFALELQK 281
V + +R + P+A I+F AG + + R+ IG+ D P+ A +
Sbjct: 89 LPVVMDLAERIRAQAPDAWVINFTNPAGVVTEAMSRVLGDRVIGICDS--PIGLARRVLG 146
Query: 282 EGPVQG 287
VQG
Sbjct: 147 ALGVQG 152
>gi|298245312|ref|ZP_06969118.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
gi|297552793|gb|EFH86658.1| uroporphyrinogen decarboxylase [Ktedonobacter racemifer DSM 44963]
Length = 317
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 80/300 (26%), Gaps = 52/300 (17%)
Query: 1 MNERKQ--KILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
M+ ++ + G ++ P+ + +F
Sbjct: 1 MSTMTPGERVRAAVAGQEVDRVPLCF-----------------WHHFRPEGSGTRLAELT 43
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
+ + D A + D+ A + T E P +DL
Sbjct: 44 KHFFVDTFKLDIAKIMPDLPYPAPDTEQ---------------ITVEQMRFLPRLDLDTP 88
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
+ LR L + ++ +P T A + Q A Q
Sbjct: 89 SFREQVTCVRTLRGMLGDDYPILLTLFSPLTYAIRFLGK------EQALKAAKQQPDLLG 142
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRIISAVR 234
L ++ + + A + AG + IF + G L E+ + +
Sbjct: 143 EGLGTIAANLYKLMEAALEAGANG--IFFSCMGATTADLTLDEYAAVGYPYDIQALRGAN 200
Query: 235 RKYPNAKFISF--AKGAGYMLKNYRRLTDSNAIGLDWSV---PLSFALELQKEGPVQGNL 289
+ N I +GA + + + + + L A L E + G L
Sbjct: 201 GGWLNTIHIHADPNQGADQIYFEFFDRYPAQVLSWSDRLTGPNLEEARTL-TEKCLMGGL 259
>gi|301163844|emb|CBW23399.1| putative methyltransferase [Bacteroides fragilis 638R]
Length = 416
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F R+ + + + + F G ++ G D P+
Sbjct: 278 SVEVFNELWLPHYRRMNDWI---HEHTTWKVFKHSCGAIVPIL---PGLIEAGFDIINPV 331
Query: 274 SFALELQKEGPVQ-----------GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
+ G ++ G +D ++ + V ++LG G F+F
Sbjct: 332 QINAKDMDSGMLKREFGSHLTFWGGGVDTQKMLPFGTPDEIRRHVLGQCEILGKDGGFVF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ ++ +++
Sbjct: 392 NSVHNIQANVPVENVIAMLDALKT 415
>gi|584867|sp|P37124|C77A2_SOLME RecName: Full=Cytochrome P450 77A2; AltName: Full=CYPLXXVIIA2;
AltName: Full=Cytochrome P-450EG5
gi|438241|emb|CAA50646.1| CYP77A2 [Solanum melongena]
Length = 511
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 52/320 (16%), Positives = 101/320 (31%), Gaps = 62/320 (19%)
Query: 21 PIWL-----MRQAGRY---LPEYRQIRKKFKN-FLDMCYTPEYTVELTLQPIRRYNFDAA 71
P+W M Q G L E+R +RK + ++ E + ++ +A
Sbjct: 136 PVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIEKIRAEADANEGVVWVLK----NAR 191
Query: 72 ILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQ-----S 126
IL+ A+ V E ++D + + L+P +D +L L P F +
Sbjct: 192 FAVFCILL---AMCFGVEMDEKTIEKIDQMMKSVLIALDPRLDDYLPILSPFFSKQRKHA 248
Query: 127 ISILRKKLPNHITLI----GFCGAPW------------TVASYMISG-GFIKDHGQNRVF 169
+ + ++++ + I +P T+ I G + +
Sbjct: 249 MDVRKQQIKTIVPFIEQRKKILESPEIDKTAASFSYLDTLFDLKIEGRNSTPTYPELVTL 308
Query: 170 AYQNSRAFNWLLDFLSDVSAEYLIA----QIHAGVDVIQIFD---THAGC--LGEHEFEN 220
L+ +D +A + I Q+++ G + E + E
Sbjct: 309 CS-------EFLNGGTDTTATAIEWAIGRLIENPNIQSQLYEEIKKTVGENKIDEKDIEK 361
Query: 221 YAARSVGRIISAVRRKYPNAKFIS-FAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALEL 279
+ ++ + RK+P A L Y T N + L
Sbjct: 362 --MPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWS 419
Query: 280 QKEGPVQGNLDPMRLVVGNQ 299
+ E DP R +G +
Sbjct: 420 EPEK-----FDPDRFYLGKE 434
>gi|53714356|ref|YP_100348.1| putative methyltransferase CmuC [Bacteroides fragilis YCH46]
gi|253564850|ref|ZP_04842306.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|52217221|dbj|BAD49814.1| putative methyltransferase CmuC [Bacteroides fragilis YCH46]
gi|251946315|gb|EES86692.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 416
Score = 38.7 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPL 273
F R+ + + + + F G ++ G D P+
Sbjct: 278 SVEVFNELWLPHYRRMNDWI---HEHTTWKVFKHSCGAIVPIL---PGLIEAGFDIINPV 331
Query: 274 SFALELQKEGPVQ-----------GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
+ G ++ G +D ++ + V ++LG G F+F
Sbjct: 332 QINAKDMDSGMLKREFGSHLTFWGGGVDTQKMLPFGTPDEIRRHVLGQCEILGKDGGFVF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ ++ +++
Sbjct: 392 NSVHNIQANVPVENVIAMLDALKT 415
>gi|47058879|gb|AAT09325.1| RH57795p [Drosophila melanogaster]
Length = 589
Score = 38.3 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 142 VKAGTHVLYIKD-MAGLLKPES--------ARLLITAIRDKHPDIPIHIHTHDTSGAGVA 192
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG-----NLD 290
+ ++ A +D +V + Q +QG NLD
Sbjct: 193 SMLACANAGADVVDVAVDSMSGMTSQPSMGAVVASLQGTPLDTNLD 238
>gi|265766191|ref|ZP_06094232.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253859|gb|EEZ25324.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 416
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 20/144 (13%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAI------ 265
F R+ + + + + F G ++ L + I
Sbjct: 278 SVEVFNELWLPHYRRMNDWI---HEHTTWKVFKHSCGAIVPILPGLIEAGFDIINPVQIN 334
Query: 266 --GLDWSVPLSFALELQKEGPV-QGNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIF 319
G+D E G +D ++ + V ++LG G F+F
Sbjct: 335 AKGMD---SEMLKREFGSHLTFWGGGVDTQKMLPFGTPDEIRRHVLGQCEILGKDGGFVF 391
Query: 320 NLGHGITPQVDPKNVLDLVKTVRS 343
N H I V +NV+ ++ +++
Sbjct: 392 NSVHNIQANVPVENVIAMLDALKT 415
>gi|170032630|ref|XP_001844183.1| pyruvate carboxylase, mitochondrial [Culex quinquefasciatus]
gi|167873013|gb|EDS36396.1| pyruvate carboxylase, mitochondrial [Culex quinquefasciatus]
Length = 1198
Score = 38.3 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +ISA+R ++P+ I +G +
Sbjct: 751 VKAGTHVLCIKD-MAGLLKPQA--------AKLLISAIRERHPDVPIHIHTHDTSGAGVA 801
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 802 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAVVASLQG 839
>gi|157123846|ref|XP_001653941.1| carboxylase:pyruvate/acetyl-coa/propionyl-coa [Aedes aegypti]
gi|108874193|gb|EAT38418.1| carboxylase:pyruvate/acetyl-coa/propionyl-coa [Aedes aegypti]
Length = 1180
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG ++ I D AG L +I+A+R K+P+ I +G +
Sbjct: 733 VKAGTHILCIKD-MAGLLKPQA--------AKLLIAAIREKHPDVPIHIHTHDTSGAGVA 783
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 784 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAVVASLQG 821
>gi|550486|gb|AAB64306.1| pyruvate carboxylase [Aedes aegypti]
Length = 1195
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG ++ I D AG L +I+A+R K+P+ I +G +
Sbjct: 748 VKAGTHILCIKD-MAGLLKPQA--------AKLLIAAIREKHPDVPIHIHTHDTSGAGVA 798
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 799 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAVVASLQG 836
>gi|58396009|ref|XP_321605.2| AGAP001519-PA [Anopheles gambiae str. PEST]
gi|55233826|gb|EAA00850.2| AGAP001519-PA [Anopheles gambiae str. PEST]
Length = 2146
Score = 38.3 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 32/183 (17%)
Query: 48 MCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQ--- 104
C Y T QPIR A++ +D IA LG N P + PI +
Sbjct: 1473 ACSRMRYISSQTEQPIRIIALSASL--ADARDIAQWLGCGTNATFNFHPSVRPIPLELHV 1530
Query: 105 EIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGA-------PWTVASYMISG 157
+ + N P++ +I+ K H +I F + V +Y +
Sbjct: 1531 QGLNITHNASRVAAMSKPVYNAIT----KFSPHKPVIVFVTSRKLARLTAIDVLTYCAAE 1586
Query: 158 GFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQ----IHAGVDVI------QIFD 207
F + LD ++D + + ++Q +H G+ Q+FD
Sbjct: 1587 LQPN------RFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYMHEGLTAADQRIVEQLFD 1640
Query: 208 THA 210
+ A
Sbjct: 1641 SGA 1643
>gi|325264890|ref|ZP_08131618.1| putative methyltransferase CmuC [Clostridium sp. D5]
gi|324029879|gb|EGB91166.1| putative methyltransferase CmuC [Clostridium sp. D5]
Length = 419
Score = 37.9 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 295 VVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKTVRSE 344
+ + V ++ G G FIFN H + +N+L + VR
Sbjct: 363 FGTPEDVRRQVLERCEIFGKDGGFIFNAIHNVQHGTPLENMLAMFNAVREF 413
>gi|301062678|ref|ZP_07203297.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300443218|gb|EFK07364.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 282
Score = 37.9 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 47 DMCYTPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEI 106
+ P ++ + + FD ++ D+ ++A+A G + + E+ P P
Sbjct: 8 QLMNDPTLWANALVKTHKLFRFDGVVVGLDVTLMAEACGCEIVWEEDR-PVASPPVNG-- 64
Query: 107 YLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQ 165
P + + L + + + + N I P T+A G G+
Sbjct: 65 LYEKPEETGRMKHALEVASRVFEVTR---NEQASIAALTGPLTLADMCFGRGKGAAHLGE 121
Query: 166 NRVFAYQNSRAF 177
+ Q + AF
Sbjct: 122 IKQLMVQVAEAF 133
>gi|302339216|ref|YP_003804422.1| uroporphyrinogen decarboxylase (URO-D) [Spirochaeta smaragdinae DSM
11293]
gi|301636401|gb|ADK81828.1| Uroporphyrinogen decarboxylase (URO-D) [Spirochaeta smaragdinae DSM
11293]
Length = 310
Score = 37.9 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 50/354 (14%), Positives = 103/354 (29%), Gaps = 68/354 (19%)
Query: 3 ERKQKILEVLQGNVINPPPI--W--LMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVEL 58
+ ++I VL G + PI W Q YLP E ++
Sbjct: 2 TKTERIDAVLSGQKPDRDPISCWYHFGTQ---YLP------------------GEKYADI 40
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLN 118
Y FD + +D V + D + + E I++
Sbjct: 41 VFSFYEYYGFDWLKVMNDYFYP-----MPVGY--------DALKSVEDLKQLKPIEIDAT 87
Query: 119 YLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFN 178
L +I I+ +L + P+ + + ++ + +A
Sbjct: 88 PLHEQLTAIDIINNRLKGEAYVCDTIFDPY----QSLQKSPVGEYLP--RLMKEEPQAVL 141
Query: 179 WLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEH------EFENYAARSVGRIISA 232
L+ ++ + EY + G I + L +F + ++ +A
Sbjct: 142 DALEIVTQNTIEYAKRTLALGTHGIFM-----SILSGEDKISKQDFLVFEKPFAMKVFAA 196
Query: 233 VRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDW-----SVPLSFALELQKEGPVQG 287
V+ P + D L W P ++ + G V G
Sbjct: 197 VKEMGP-----MNTAHLHGKHIDIDECLDFPVAVLSWEDRQVGNPSLQEVKRKWSGAVMG 251
Query: 288 NLDPMRL-VVGNQVMIDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVK 339
+D + + ++ +++ G F+ N G ++D + +V
Sbjct: 252 GIDNTIMTRRTPEFLMKHTLEGIEMGGKSRFFLAN-GCSSPAEMDTYALKAIVD 304
>gi|300726370|ref|ZP_07059822.1| endopeptidase PepO [Prevotella bryantii B14]
gi|299776395|gb|EFI72953.1| endopeptidase PepO [Prevotella bryantii B14]
Length = 673
Score = 37.9 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 152 SYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAG 211
+Y + + D + A + + L++ S E L + + +QI + AG
Sbjct: 261 AYRTALKYPTDFEKI---NVGQPDALHEVERVLAETSIEDLKSYME-----LQIIRSCAG 312
Query: 212 CLGEHEFENYAARSVGRIISAVRRKYP 238
L +F N + + + V+ + P
Sbjct: 313 YLS-DDFTNRSFEY-RKAVYGVKEQQP 337
>gi|296454526|ref|YP_003661669.1| hypothetical protein BLJ_1395 [Bifidobacterium longum subsp. longum
JDM301]
gi|296183957|gb|ADH00839.1| hypothetical protein BLJ_1395 [Bifidobacterium longum subsp. longum
JDM301]
Length = 347
Score = 37.5 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 21/220 (9%)
Query: 101 ITTQEIYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM--ISG 157
IT + +D+ Y + +++R L + ++ +P +V + +
Sbjct: 89 ITEPDDVRGVKELDVRDNEYFAEALAAAALIRHGLEDR-AVLQTVFSPLSVLLQIADLPL 147
Query: 158 GFIKDHGQNRV----FAYQNSRAFNWLLDFLSDVSAEYLIAQI----HAGVDVIQIFDTH 209
D+ + + L ++ A Y A + G + +F
Sbjct: 148 YPGDDYATATLRVEDLIFNQPDVAKMALANIARTLASYARALVRPESEGGAGLDGVFYAL 207
Query: 210 AGCLGEHEFE-----NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
G + E F+ ++ +I AV R P+A + N+ + +
Sbjct: 208 TGTVSEGYFDAQRYLEFSEPYDRIVIDAVHRANPDA-VVLLHTCRAESHPNWFDVKGVDL 266
Query: 265 IGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
+ D P + ++ PV G P L + +
Sbjct: 267 LQWDQYQPGNPQVDADLTAVPVAGA--PYDLFAPDGDVEQ 304
>gi|166032608|ref|ZP_02235437.1| hypothetical protein DORFOR_02323 [Dorea formicigenerans ATCC
27755]
gi|166026965|gb|EDR45722.1| hypothetical protein DORFOR_02323 [Dorea formicigenerans ATCC
27755]
Length = 297
Score = 37.5 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 102 TTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIK 161
T E L P++D + + LR++ + ++ P+T+ + +I
Sbjct: 97 TDVEEILNLPDMDFTKGRIQETLLACKKLREEGEH---VVFEVAGPFTILNVLI------ 147
Query: 162 DHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGC--LGEHEFE 219
D + + L D +Y+ G D+I D+ G LG E
Sbjct: 148 DARYVFKGMRKKPEVMEKVFWKLGDQILKYMELVKEYGGDLISYADSSGGVNILGPKMME 207
Query: 220 ----NYAARSVGRI 229
N+ + ++
Sbjct: 208 AVTVNFTYPFLKKV 221
>gi|301161854|emb|CBW21398.1| possible methyltransferase [Bacteroides fragilis 638R]
Length = 417
Score = 37.5 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 25/182 (13%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
+ + L D + DV G Q F R+
Sbjct: 247 NYEKLWAALGDKI-DVVLTCGT---DFGSQESQF-------CSIDTFRELWLPHYRRMND 295
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIG-LDWSVPLSFALELQKEGPVQ-- 286
+ + + + F G ++ L + I + + + L++E Q
Sbjct: 296 WI---HQHTTWKIFKHSCGAIIPILPGLIEAGFDIINPVQINAKDMDSRRLKEEFGSQLT 352
Query: 287 ---GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKT 340
G +D ++ + V ++LG G F+FN H + V NV+ +
Sbjct: 353 FWGGGVDTQKILPFGTPDEIRRHVMGQCEILGRDGGFVFNAVHNVQANVPVDNVVAMFDA 412
Query: 341 VR 342
++
Sbjct: 413 LK 414
>gi|53712135|ref|YP_098127.1| hypothetical protein BF0842 [Bacteroides fragilis YCH46]
gi|60680321|ref|YP_210465.1| methyltransferase [Bacteroides fragilis NCTC 9343]
gi|253563827|ref|ZP_04841284.1| methyltransferase [Bacteroides sp. 3_2_5]
gi|265765466|ref|ZP_06093741.1| methyltransferase [Bacteroides sp. 2_1_16]
gi|52215000|dbj|BAD47593.1| hypothetical protein [Bacteroides fragilis YCH46]
gi|60491755|emb|CAH06513.1| possible methyltransferase [Bacteroides fragilis NCTC 9343]
gi|251947603|gb|EES87885.1| methyltransferase [Bacteroides sp. 3_2_5]
gi|263254850|gb|EEZ26284.1| methyltransferase [Bacteroides sp. 2_1_16]
Length = 417
Score = 37.5 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 25/182 (13%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIIS 231
+ + L D + DV G Q F R+
Sbjct: 247 NYEKLWAALGDKI-DVVLTCGT---DFGSQESQF-------CSIDTFRELWLPHYRRMND 295
Query: 232 AVRRKYPNAKFISFAKGAGYMLKNYRRL--TDSNAIG-LDWSVPLSFALELQKEGPVQ-- 286
+ + + + F G ++ L + I + + + L++E Q
Sbjct: 296 WI---HQHTTWKIFKHSCGAIIPILPGLIEAGFDIINPVQINAKDMDSRRLKEEFGSQLT 352
Query: 287 ---GNLDPMRL--VVGNQVMIDGVNAILDVLGS-GPFIFNLGHGITPQVDPKNVLDLVKT 340
G +D ++ + V ++LG G F+FN H + V NV+ +
Sbjct: 353 FWGGGVDTQKILPFGTPDEIRRHVMGQCEILGRDGGFVFNAVHNVQANVPVDNVVAMFDA 412
Query: 341 VR 342
++
Sbjct: 413 LK 414
>gi|118385474|ref|XP_001025866.1| Translationally controlled tumor protein [Tetrahymena thermophila]
gi|89307633|gb|EAS05621.1| Translationally controlled tumor protein [Tetrahymena thermophila
SB210]
Length = 169
Score = 37.5 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 38/122 (31%), Gaps = 20/122 (16%)
Query: 151 ASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQIFDTHA 210
++Y+ D G F + + DV + + G
Sbjct: 33 STYITKNEADIDIGCGNAFGGSGEEEGKADAEKILDVIDAFKYQETSFG----------- 81
Query: 211 GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYM----LKNYRRLTDSNAIG 266
+ ++ Y + ++ + K P+ + F KGAG M L+N+ T
Sbjct: 82 ----KKDYTTYIKGYMKKVKQHLEEKNPD-RVAGFMKGAGEMVKWILENFEEFTFYTPES 136
Query: 267 LD 268
D
Sbjct: 137 YD 138
>gi|302552259|ref|ZP_07304601.1| methicillin resistance protein [Streptomyces viridochromogenes DSM
40736]
gi|302469877|gb|EFL32970.1| methicillin resistance protein [Streptomyces viridochromogenes DSM
40736]
Length = 381
Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 33/102 (32%), Gaps = 8/102 (7%)
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKE 282
R+ A+ ++P+ + A G +L LT + + + E+Q
Sbjct: 248 LPYFQRMWHALTAEHPDRMRLYLASHDGEVLAAATMLTVGDHVWYSYGASTGRRREVQAS 307
Query: 283 GPVQGNLDPMRLVVGNQVMIDGV---NAILDVLGSGPFIFNL 321
VQ R++ + V I D L + L
Sbjct: 308 SAVQ-----WRMMTDAHELGAAVYDLRGITDTLEESSHLLGL 344
>gi|332983193|ref|YP_004464634.1| hypothetical protein Mahau_2676 [Mahella australiensis 50-1 BON]
gi|332700871|gb|AEE97812.1| hypothetical protein Mahau_2676 [Mahella australiensis 50-1 BON]
Length = 353
Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 62/221 (28%), Gaps = 49/221 (22%)
Query: 146 APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY---LIAQIHAGVDV 202
+P VA+ + D+ Y++ LL+ E + I+
Sbjct: 158 SPLDVANLLRGNELFTDY-------YEHPYELKKLLELAVPAILENYFNIHEAINNPWGG 210
Query: 203 IQIFDTH--AGCL---------GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGY 251
F +G L +++ + A R+I+A Y I A +
Sbjct: 211 TFTFGKWIPSGILILEDAADMSSPTQYQEFGAPYTSRVINAAGGAY-----IHHHSLAPH 265
Query: 252 MLKNYRRLTDSNAIGLDWS-------VPLSFALELQKEGPVQGNLDPMRLVVGNQVMIDG 304
KN L + L + L + V + + +
Sbjct: 266 QYKNIAGLNGVWIEQISSDPRPKRPVTDLGYLLSQVGDIAV-----------DIECVPEE 314
Query: 305 VNAILDVLGSGPFIFNLGHGITPQVDPKNVLDLVKTVRSEK 345
V +D L G FI + + +++ VR
Sbjct: 315 VYMYIDELRKGRFILTVSC-----SNRDEAEEVISFVRDHS 350
>gi|95113778|gb|ABF55416.1| HemE [Wolbachia endosymbiont of Aedes albopictus]
Length = 29
Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQA 28
M K I+EV++ PIWLMRQA
Sbjct: 1 MESSKTTIIEVIKKNEPGERVPIWLMRQA 29
>gi|148271527|ref|YP_001221088.1| putative 6-phospho-beta-glucosidase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829457|emb|CAN00370.1| putative 6-phospho-beta-glucosidase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 447
Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 223 ARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-DWSVPLSFALELQK 281
V + +R + P+A I+F AG + + R+ IG+ D P+ A +
Sbjct: 120 LPVVMDLAERIRVQAPDAWVINFTNPAGVVTEAMSRVLGDRVIGICDS--PIGLARRVLG 177
Query: 282 EGPVQG 287
VQG
Sbjct: 178 ALGVQG 183
>gi|301059702|ref|ZP_07200603.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300446195|gb|EFK10059.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 272
Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 7/128 (5%)
Query: 51 TPEYTVELTLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLN 110
P ++ + + FD ++ D+ ++A+A G + + E+ P P
Sbjct: 2 DPTLWANALVKTHKLFRFDGVVVGLDVTLMAEACGCEIVWEEDR-PVASPPVNG--LYEK 58
Query: 111 PNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMIS-GGFIKDHGQNRVF 169
P + + L + + + + N I P T+A G G+ +
Sbjct: 59 PEETGRMKHALEVASRVFEVTR---NEQASIAALTGPLTLADMCFGRGKGAAHLGEIKQL 115
Query: 170 AYQNSRAF 177
Q + AF
Sbjct: 116 MVQVAEAF 123
>gi|310829822|ref|YP_003962179.1| hypothetical protein ELI_4276 [Eubacterium limosum KIST612]
gi|308741556|gb|ADO39216.1| hypothetical protein ELI_4276 [Eubacterium limosum KIST612]
Length = 381
Score = 37.5 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 217 EFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFA 276
+FE S +I + + + F + + + IG L
Sbjct: 247 DFEKLYWPSFKALIDELVGEGYTIQV--FFEKNWTRYYEFLQDLPKGVIGYFEEDDLGVV 304
Query: 277 LE-LQKEGPVQGNLDPMRLVVGN--QVMIDGVNAILDVLG-SGPFIFN-----LGHGITP 327
E L K+ + GN+ P+ ++ Q +D I+D +G ++F L
Sbjct: 305 KEKLGKKMCIMGNM-PLSILRTGTVQQCVDTAKEIIDKAAPNGGYLFTTDKSLL---TVK 360
Query: 328 QVDPKNVLDLVKTVRSEKI 346
V +N + + V I
Sbjct: 361 DVKAENFRAVNEFVHEYGI 379
>gi|156540073|ref|XP_001600219.1| PREDICTED: similar to pyruvate carboxylase [Nasonia vitripennis]
Length = 1196
Score = 37.1 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L ++ ++ A+R+K+P+ I +G +
Sbjct: 749 VKAGTHVLSIKD-MAGLLKP--------KAASMLVDAIRQKHPDVPIHIHTHDTSGSGVA 799
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ + A +D +V + Q +QG
Sbjct: 800 SMLACAKAGADVVDVAVDSMSGMTSQPSMGALVACLQG 837
>gi|58390932|ref|XP_318078.2| AGAP004742-PB [Anopheles gambiae str. PEST]
gi|55236884|gb|EAA13216.3| AGAP004742-PB [Anopheles gambiae str. PEST]
Length = 1180
Score = 37.1 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 733 VKAGTHVLCIKD-MAGLLKPQA--------ARLLITAIREKHPDVPIHIHTHDTSGAGVA 783
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 784 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAVVASLQG 821
>gi|158297962|ref|XP_001689096.1| AGAP004742-PA [Anopheles gambiae str. PEST]
gi|157014579|gb|EDO63513.1| AGAP004742-PA [Anopheles gambiae str. PEST]
Length = 1196
Score = 37.1 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +I+A+R K+P+ I +G +
Sbjct: 749 VKAGTHVLCIKD-MAGLLKPQA--------ARLLITAIREKHPDVPIHIHTHDTSGAGVA 799
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 800 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAVVASLQG 837
>gi|251810791|ref|ZP_04825264.1| permease [Staphylococcus epidermidis BCM-HMP0060]
gi|251805719|gb|EES58376.1| permease [Staphylococcus epidermidis BCM-HMP0060]
gi|329735852|gb|EGG72131.1| putative membrane protein [Staphylococcus epidermidis VCU028]
Length = 405
Score = 37.1 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 134 LPNHITLIGFCGA--PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+ IG P+ + + G KD+ ++ + + F+ LL+ +S Y
Sbjct: 186 FAEAVANIGIVIGTTPFVLFFMLKDGHKFKDYT-TKIMPPKFRKDFHDLLEKMSVQVGSY 244
Query: 192 LIAQI 196
+ QI
Sbjct: 245 IQGQI 249
>gi|314965464|gb|EFT09563.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL082PA2]
gi|315094514|gb|EFT66490.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL060PA1]
gi|327329009|gb|EGE70769.1| 6-phospho-beta-glucosidase [Propionibacterium acnes HL103PA1]
Length = 462
Score = 37.1 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-D 268
AG + + V ++ + R P+AK I+F AG M + +R +G+ D
Sbjct: 110 AGGIS---YALRGIPVVLDLVEQITRYAPDAKVINFTNPAGVMTEVMQRRLGDQVVGICD 166
Query: 269 WSVPLSFALELQKEGPVQG 287
P+ A + +QG
Sbjct: 167 S--PVGLARRIL--TTLQG 181
>gi|282853103|ref|ZP_06262440.1| family 4 glycosyl hydrolase [Propionibacterium acnes J139]
gi|282582556|gb|EFB87936.1| family 4 glycosyl hydrolase [Propionibacterium acnes J139]
gi|314982860|gb|EFT26952.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL110PA3]
gi|315091279|gb|EFT63255.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL110PA4]
gi|315104933|gb|EFT76909.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL050PA2]
Length = 462
Score = 37.1 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-D 268
AG + + V ++ + R P+AK I+F AG M + +R +G+ D
Sbjct: 110 AGGIS---YALRGIPVVLDLVEQITRYAPDAKVINFTNPAGVMTEVMQRRLGDQVVGICD 166
Query: 269 WSVPLSFALELQKEGPVQG 287
P+ A + +QG
Sbjct: 167 S--PVGLARRIL--TTLQG 181
>gi|57866873|ref|YP_188508.1| hypothetical protein SERP0929 [Staphylococcus epidermidis RP62A]
gi|242242638|ref|ZP_04797083.1| permease [Staphylococcus epidermidis W23144]
gi|293366676|ref|ZP_06613352.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|57637531|gb|AAW54319.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
gi|242233774|gb|EES36086.1| permease [Staphylococcus epidermidis W23144]
gi|291318977|gb|EFE59347.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319401353|gb|EFV89564.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
gi|329725108|gb|EGG61602.1| putative membrane protein [Staphylococcus epidermidis VCU144]
gi|329736684|gb|EGG72950.1| putative membrane protein [Staphylococcus epidermidis VCU045]
Length = 405
Score = 37.1 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 134 LPNHITLIGFCGA--PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+ IG P+ + + G KD+ ++ + + F+ LL+ +S Y
Sbjct: 186 FAEAVANIGIVIGTTPFVLFFMLKDGHKFKDYT-TKIMPPKFRKDFHDLLEKMSVQVGSY 244
Query: 192 LIAQI 196
+ QI
Sbjct: 245 IQGQI 249
>gi|27467958|ref|NP_764595.1| hypothetical protein SE1040 [Staphylococcus epidermidis ATCC 12228]
gi|27315503|gb|AAO04637.1|AE016747_134 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
Length = 409
Score = 37.1 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 134 LPNHITLIGFCGA--PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+ IG P+ + + G KD+ ++ + + F+ LL+ +S Y
Sbjct: 190 FAEAVANIGIVIGTTPFVLFFMLKDGHKFKDYT-TKIMPPKFRKDFHDLLEKMSVQVGSY 248
Query: 192 LIAQI 196
+ QI
Sbjct: 249 IQGQI 253
>gi|282876206|ref|ZP_06285073.1| putative membrane protein [Staphylococcus epidermidis SK135]
gi|281295231|gb|EFA87758.1| putative membrane protein [Staphylococcus epidermidis SK135]
Length = 368
Score = 37.1 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Query: 134 LPNHITLIGFCGA--PWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEY 191
+ IG P+ + + G KD+ ++ + + F+ LL+ +S Y
Sbjct: 149 FAEAVANIGIVIGTTPFVLFFMLKDGHKFKDYT-TKIMPPKFRKDFHDLLEKMSVQVGSY 207
Query: 192 LIAQI 196
+ QI
Sbjct: 208 IQGQI 212
>gi|325290643|ref|YP_004266824.1| hypothetical protein Sgly_2540 [Syntrophobotulus glycolicus DSM
8271]
gi|324966044|gb|ADY56823.1| hypothetical protein Sgly_2540 [Syntrophobotulus glycolicus DSM
8271]
Length = 257
Score = 37.1 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 12/144 (8%)
Query: 146 APWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDFLSDVSAEYLIAQIHAGVDVIQI 205
AP+++ + S ++ + L L++ A+Y GV VI +
Sbjct: 100 APYSLLCDVCSPRLP-------LWLLRYPDEVEAALLSLTEALADYGAKAFDHGVKVISL 152
Query: 206 FDTHA--GCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLT--D 261
D A LGE +AA+ ++ ++ + + L+ Y
Sbjct: 153 CDMQALPAVLGEKHHRRFAAKYQVLLLKSLLAE-GGRGVVHVCPFTFSPLETYSLAFYHG 211
Query: 262 SNAIGLDWSVPLSFALELQKEGPV 285
G D+ + E + V
Sbjct: 212 YPIPGKDYQAAVLERYERGRRVVV 235
>gi|289742291|gb|ADD19893.1| pyruvate carboxylase [Glossina morsitans morsitans]
Length = 753
Score = 37.1 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L +ISA+R K+P+ I +G +
Sbjct: 306 VKAGTHVLAIKD-MAGLLKPQA--------AKLLISAIRDKHPDVPIHIHTHDTSGAGVA 356
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
+ ++ A +D +V + Q +QG
Sbjct: 357 SMLACAEAGADVVDVAVDSMSGMTSQPSMGAIVASLQG 394
>gi|194755401|ref|XP_001959980.1| GF13141 [Drosophila ananassae]
gi|190621278|gb|EDV36802.1| GF13141 [Drosophila ananassae]
Length = 1198
Score = 36.7 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 15/98 (15%)
Query: 196 IHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAKF-ISFAKGAGYMLK 254
+ AG V+ I D AG L ++SA+R K+P+ I +G +
Sbjct: 751 VKAGTHVLCIKD-MAGLLKPQS--------AKLLVSAIRDKHPDVPIHIHTHDTSGAGVA 801
Query: 255 NYRRLTDSNAIGLDWSVPLSFALELQKE-----GPVQG 287
++ A +D +V + Q +QG
Sbjct: 802 CMLACAEAGADVVDVAVDSMSGMTSQPSMGAIVASLQG 839
>gi|4538620|emb|CAB39402.1| hypothetical protein [Methylobacterium chloromethanicum]
Length = 414
Score = 36.7 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD 268
E +F + + RI+ +R +A F +G+ + +G+D
Sbjct: 208 SERDFRDLILPRMRRILERIRSTT-SAPIGVFIRGSALSALSSVAELGVAVLGVD 261
>gi|310829735|ref|YP_003962092.1| hypothetical protein ELI_4187 [Eubacterium limosum KIST612]
gi|308741469|gb|ADO39129.1| hypothetical protein ELI_4187 [Eubacterium limosum KIST612]
Length = 385
Score = 36.7 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 6/135 (4%)
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLS 274
E +F + ++ + + + I F + L + +G +
Sbjct: 249 EKDFAKLWWPTFKEMVERMAARGQYMR-IYFEGDWTRYYDYLQDLPKGHILGAFEYMDPQ 307
Query: 275 FAL-ELQKEGPVQGNLDPMRL-VVGNQVMIDGVNAILDVLG-SGPFIFNLGHGIT-P-QV 329
A +L K + D L + +ID ++DVL G +IF + GIT P
Sbjct: 308 LAKDKLGKTMCITAGYDVSLLQYGTKEKVIDEAKKLMDVLAPGGGYIFTVAKGITYPNDG 367
Query: 330 DPKNVLDLVKTVRSE 344
P+NV L + V S
Sbjct: 368 TPENVRALYEFVESY 382
>gi|295108829|emb|CBL22782.1| B12 binding domain./Pterin binding enzyme. [Ruminococcus obeum
A2-162]
Length = 943
Score = 36.7 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 51/195 (26%), Gaps = 38/195 (19%)
Query: 172 QNSRAFNWLLDFLSDVSAEYLIA-----QIHAGVDVIQIFDTHA------------GCLG 214
+ ++DV EY + G + +F +
Sbjct: 743 DEPDMIGERIQEVTDVYYEYYDRFYDIIKDEEGGNAYTVFQIWGPGRTVKLQCDFSAMMS 802
Query: 215 EHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNY--------RRLTDSNAIG 266
+F Y S+ V + + K +++ +
Sbjct: 803 PEDFRKYIQPSLREQSEKVDHVLYHLDGPAAIKHMDALMEIDGIDALQWTSGDAGPDGTL 862
Query: 267 LDWSVPLSFALELQKEGPVQGNLDPMRLVVGN-QVMIDGVNAILDVLGSGPFIFNLGHGI 325
DW V A+ K V ++ G + I V+ I+ GS +
Sbjct: 863 PDWDVIYDKAIAAGKSIWV-------KVYSGEFEDWIKNVDRIVKKYGSHSLFL-----L 910
Query: 326 TPQVDPKNVLDLVKT 340
P++ + L+
Sbjct: 911 FPEMSLEQAAYLLDY 925
>gi|242373654|ref|ZP_04819228.1| permease [Staphylococcus epidermidis M23864:W1]
gi|242348622|gb|EES40224.1| permease [Staphylococcus epidermidis M23864:W1]
Length = 404
Score = 36.7 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 114 DLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQN 173
D F + L ++++ + + P+ + + G KD+ ++ +
Sbjct: 177 DGFGSKLASFAEAVANV---------GVVIVTTPFVLFFMLKDGHRFKDY-TTKIMPPKF 226
Query: 174 SRAFNWLLDFLSDVSAEYLIAQI 196
+ F+ LL+ +S Y+ QI
Sbjct: 227 RKDFHDLLEKMSVQVGSYIQGQI 249
>gi|158522967|ref|YP_001530837.1| uroporphyrinogen-III decarboxylase-like protein [Desulfococcus
oleovorans Hxd3]
gi|158511793|gb|ABW68760.1| Uroporphyrinogen-III decarboxylase-like protein [Desulfococcus
oleovorans Hxd3]
Length = 408
Score = 36.7 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 93/288 (32%), Gaps = 44/288 (15%)
Query: 79 VIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHI 138
+I D G G I + + + P +++ + +
Sbjct: 136 MIPDGFGSMTYMYRGPG-----INSPQEFDAWPYWPDTDEMAHRVYKYYKKFLAQHGDKT 190
Query: 139 TLI--GFCGAPWTVASYMISGGFIKDHGQNRV--FAYQNSRAFNWLLDFLSDVSAEYLIA 194
++ GF G ++ G +V + ++ LD L +++ + A
Sbjct: 191 CVMTQGFFGGLQESMNW--------TFGIAKVPLWIKKHPDYTKRFLDILEEINFKVHTA 242
Query: 195 QIHAGVDVIQIFDTHA---GC-LGEHEFEN-YAARSVGRIISAVRRKYPNAKFISFAKGA 249
I AG VI D A G + E+ + R R+ + ++ AK + + G
Sbjct: 243 MIDAGSPVILTTDDFAFKTGPFMSPKMVEDLFGERY-KRLFKNIHQR--GAKAVLHSCGD 299
Query: 250 GYMLKNYRRLTDSNAIGL---DWSVPL-SFALELQKEGPVQGNLDPMRLVVG---NQVMI 302
L + ++ + +V + S + G + L+ ++ ++
Sbjct: 300 NTKLFDVFAGWGADGLHAFENTSNVDIFSIKKSHGDRFTIMGGVGIDYLLTERSKDEEIV 359
Query: 303 DGVNAILDVLG-SGPFIFNLGHGITPQ-----VDPKNVLDLVKTVRSE 344
D V ++ LG G FI I P + + ++ +
Sbjct: 360 DKVKELISRLGPGGRFI------IGPTHSEDSMPAHKLRVMLDAAKKY 401
>gi|325261448|ref|ZP_08128186.1| hypothetical protein HMPREF0240_00418 [Clostridium sp. D5]
gi|324032902|gb|EGB94179.1| hypothetical protein HMPREF0240_00418 [Clostridium sp. D5]
Length = 373
Score = 36.7 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 19/196 (9%), Positives = 55/196 (28%), Gaps = 25/196 (12%)
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFA---------YQNSRAFNWLLDFLSDVSAEYLIA 194
G +A ++ G + L+ + +S + +
Sbjct: 152 AGGEALLAPLLVPFGKSDFQSLIEYWVGTEEMAYALMDEPELVEETLEVMGRLSGQAVR- 210
Query: 195 QIHAGVDVIQIFDTHAGC----LGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAG 250
I A + ++F + +++E Y + + V +
Sbjct: 211 -ISADSEA-EVFISWEDSSTTNYSPYQYEQYILPQINQ-WCRVLHGHQKYYIQHACGHLA 267
Query: 251 YMLKNYRRLTDSNAIGLDWSVPL------SFALELQKEGPVQGNLDPMRLV-VGNQVMID 303
+ +RR + + + P ++K+ G ++P+ + + +
Sbjct: 268 ALAPAFRR-SKIDCLESVSPPPTGNIGLEELCSRIEKDITYIGGIEPVFFLNASLEELEM 326
Query: 304 GVNAILDVLGSGPFIF 319
++ + FI
Sbjct: 327 EALRLMKCMEGRRFIL 342
>gi|218533529|ref|YP_002424344.1| hypothetical protein Mchl_5698 [Methylobacterium chloromethanicum
CM4]
gi|218525832|gb|ACK86416.1| hypothetical protein Mchl_5698 [Methylobacterium chloromethanicum
CM4]
Length = 365
Score = 36.4 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 214 GEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGLD 268
E +F + + RI+ +R +A F +G+ + +G+D
Sbjct: 159 SERDFRDLILPRMRRILERIRSTT-SAPIGVFIRGSALSALSSVAELGVAVLGVD 212
>gi|313835104|gb|EFS72818.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL037PA2]
gi|314929082|gb|EFS92913.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL044PA1]
gi|314970823|gb|EFT14921.1| family 4 glycosyl hydrolase [Propionibacterium acnes HL037PA3]
gi|328905847|gb|EGG25623.1| putative glucosidase [Propionibacterium sp. P08]
Length = 462
Score = 36.4 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 8/79 (10%)
Query: 210 AGCLGEHEFENYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL-D 268
AG + + V ++ + + P+AK I+F AG M + +R +G+ D
Sbjct: 110 AGGIS---YALRGIPVVLDLVEQITQYAPDAKVINFTNPAGVMTEVMQRRLGDQVVGICD 166
Query: 269 WSVPLSFALELQKEGPVQG 287
P+ A + +QG
Sbjct: 167 S--PVGLARRIL--TTLQG 181
>gi|150396484|ref|YP_001326951.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
medicae WSM419]
gi|150027999|gb|ABR60116.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
medicae WSM419]
Length = 169
Score = 36.4 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 87 NVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT---LIGF 143
+V++ + G + +P P++ + + + + S+ R ++PN I F
Sbjct: 63 DVQYGKTGGEQFNPARAGMGGSSKPDLKAEFSDVSHVRGTCSMARSQMPNSANSQFFICF 122
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
+PW Y + G ++
Sbjct: 123 TDSPWLNKQYSVWGQVVEGMENIDAIKRGEP 153
>gi|227822131|ref|YP_002826102.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Sinorhizobium fredii NGR234]
gi|227341131|gb|ACP25349.1| peptidyl-prolyl cis-trans isomerase, cyclophilin type
[Sinorhizobium fredii NGR234]
Length = 169
Score = 36.0 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 87 NVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT---LIGF 143
+V++ + G +P P++ + + + + S+ R ++PN I F
Sbjct: 63 DVQYGKTGGEHFNPARAGMGGSSKPDLKAEFSEVSHVRGTCSMARSQMPNSANSQFFICF 122
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
APW Y + G I+
Sbjct: 123 TDAPWLNKQYSVWGQVIEGMDIIDQIKRGEP 153
>gi|213691648|ref|YP_002322234.1| hypothetical protein Blon_0752 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213523109|gb|ACJ51856.1| hypothetical protein Blon_0752 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320457737|dbj|BAJ68358.1| hypothetical protein BLIJ_0766 [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 347
Score = 36.0 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 21/220 (9%)
Query: 101 ITTQEIYLLNPNIDL-FLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYM--ISG 157
IT + +D+ Y + +++R L + ++ +P +V + +
Sbjct: 89 ITEPDDVRGVKELDVRDNEYFAEALAAAALIRHGLEDR-AVLQTVFSPLSVLLQIADLPL 147
Query: 158 GFIKDHGQNRV----FAYQNSRAFNWLLDFLSDVSAEYLIAQI----HAGVDVIQIFDTH 209
D+ + + L ++ A Y A + G + +F
Sbjct: 148 YPGDDYATATLRVEDLIFNQPGVAKLALANIARTLASYARALVRPESEGGAGLDGVFYAL 207
Query: 210 AGCLGEHEFE-----NYAARSVGRIISAVRRKYPNAKFISFAKGAGYMLKNYRRLTDSNA 264
G + E F+ ++ +I AV R P+A + N+ + +
Sbjct: 208 TGTVSEGYFDAQRYLEFSEPYDRIVIDAVHRANPDA-VVLLHTCRAESHPNWFDVKGVDL 266
Query: 265 IGLDWSVPLSFALEL-QKEGPVQGNLDPMRLVVGNQVMID 303
+ D P + ++ PV G P L + +
Sbjct: 267 LQWDQYQPGNPQVDADLTAVPVAGA--PYDLFAPDGDVEQ 304
>gi|317121121|ref|YP_004101124.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
DSM 12885]
gi|315591101|gb|ADU50397.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
DSM 12885]
Length = 549
Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 78/223 (34%), Gaps = 34/223 (15%)
Query: 51 TPEYTVELTLQPIRRYNFDAA-ILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLL 109
+P++ V LQ + RY+ I+ D +++ R+VRF EN + ++
Sbjct: 164 SPQHRVRDALQLMARYHISGVPIVDGDGVLVGIITNRDVRFEEN-------LDRPIAEVM 216
Query: 110 NPNIDLFLNYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVF 169
+ + ++ I+R+ + L+ G + + KD + +
Sbjct: 217 TREGLVTAPEGTTLARAKEIMRQHKIEKLPLVDGAGRLRGLITI-------KDIEKAIRY 269
Query: 170 AYQNSRAFNWLLDFLS----DVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARS 225
L+ + E A + AGVDV+ + D+ A +
Sbjct: 270 PNAAKDDKGRLMVGAAVGVGPAGLERADALVEAGVDVLVV-DS-AHGHSRN--------- 318
Query: 226 VGRIISAVRRKYPNAKFI----SFAKGAGYMLKNYRRLTDSNA 264
V + A++R++P I A+G +++
Sbjct: 319 VLETVRALKRRHPGVPVIAGNVVTAEGTRALIEAGADAVKVGV 361
>gi|258655355|ref|YP_003204511.1| hypothetical protein Namu_5256 [Nakamurella multipartita DSM 44233]
gi|258558580|gb|ACV81522.1| hypothetical protein Namu_5256 [Nakamurella multipartita DSM 44233]
Length = 612
Score = 36.0 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 25/212 (11%)
Query: 59 TLQPIRRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITT-QEIYLLNPNIDLFL 117
TL P D AI + I+ I GPR+ +
Sbjct: 154 TLDPAALAPKDGAIDLAPIVAI--------------GPRLQQADAAVQDARARLGQIDKS 199
Query: 118 NYLLPIFQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAF 177
+ + P+ ++S L+ KL L + + + + RA
Sbjct: 200 SIVAPVGDAVSALQAKLDAAADLTDPAARIARLLPAALGADGPRTYLVVFQ-NLAEPRAT 258
Query: 178 NWLLDFLSDVSAEYLIAQI--HAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRR 235
+ + V+A+ I A ++ F+ G L + + + + +
Sbjct: 259 GGIFGSYAVVTADQGKVTIVDQAPARSMKFFEPPVGGLSDDQQRLFGSEP-----ATFPA 313
Query: 236 KYPNAKFISFAKGAGYMLKNYRRLTDSNAIGL 267
F A ++ Y+ G+
Sbjct: 314 DVNLTP--DFPTAARLFIEMYQARGGGAVDGV 343
>gi|95113817|gb|ABF55442.1| HemE [Wolbachia endosymbiont of Solenopsis invicta]
Length = 29
Score = 36.0 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 1 MNERKQKILEVLQG-NVINPPPIWLMRQA 28
M K I+EV++ PIWLMRQA
Sbjct: 1 MESSKTTIVEVIKQNEPGERVPIWLMRQA 29
>gi|15965337|ref|NP_385690.1| putative peptidyl-prolyl cis-trans isomerase B protein
[Sinorhizobium meliloti 1021]
gi|307312709|ref|ZP_07592340.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti BL225C]
gi|307317195|ref|ZP_07596636.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti AK83]
gi|21636312|gb|AAM69921.1|AF451910_1 glucuronan lyase [Sinorhizobium meliloti]
gi|15074517|emb|CAC46163.1| Putative peptidyl-prolyl cis-trans isomerase B [Sinorhizobium
meliloti 1021]
gi|306897283|gb|EFN28028.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti AK83]
gi|306899434|gb|EFN30066.1| peptidyl-prolyl cis-trans isomerase cyclophilin type [Sinorhizobium
meliloti BL225C]
Length = 169
Score = 36.0 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 87 NVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPIFQSISILRKKLPNHIT---LIGF 143
+V++ + G + +P P++ + + + + S+ R ++PN I F
Sbjct: 63 DVQYGKTGGEQFNPSRAGMGGSSKPDLKAEFSDVSHVRGTCSMARSQMPNSANSQFFICF 122
Query: 144 CGAPWTVASYMISGGFIKDHGQNRVFAYQNS 174
APW Y + G ++
Sbjct: 123 TDAPWLNKQYSVWGQVVEGMENIDNIKRGEP 153
>gi|95113835|gb|ABF55454.1| HemE [Wolbachia endosymbiont of Acraea eponina]
Length = 29
Score = 36.0 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 1 MNERKQKILEVLQGNVI-NPPPIWLMRQA 28
M K I+ +++ N PIWLMRQA
Sbjct: 1 MESNKPTIVRIIKQNKPNEKVPIWLMRQA 29
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.156 0.499
Lambda K H
0.267 0.0477 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,024,714,683
Number of Sequences: 14124377
Number of extensions: 309238246
Number of successful extensions: 885509
Number of sequences better than 10.0: 2532
Number of HSP's better than 10.0 without gapping: 3897
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 866149
Number of HSP's gapped (non-prelim): 4767
length of query: 346
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 206
effective length of database: 2,865,380,850
effective search space: 590268455100
effective search space used: 590268455100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 82 (36.0 bits)