RPSBLAST alignment of GI: 254780812 and MMDB domain: 3cyv_A_

>3cyv_A (A:) URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}Length = 354
 Score =  234 bits (598), Expect = 1e-62
 Identities = 115/343 (33%), Positives = 176/343 (51%), Gaps = 3/343 (0%)

Query: 4   RKQKILEVLQGNVINPPPIWLMRQAGRYLPEYRQIRKKFKNFLDMCYTPEYTVELTLQPI 63
           +  + L  L    ++  P+W+MRQAGRYLPEY+  R +  +F+ +C   E   E+TLQP+
Sbjct: 5   KNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPL 64

Query: 64  RRYNFDAAILFSDILVIADALGRNVRFVENEGPRMDPITTQEIYLLNPNIDLFLNYLLPI 123
           RRY  DAAILFSDIL + DA+G  + F   EGPR     T +  +    I    + L  +
Sbjct: 65  RRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYV 124

Query: 124 FQSISILRKKLPNHITLIGFCGAPWTVASYMISGGFIKDHGQNRVFAYQNSRAFNWLLDF 183
             ++  +R +L   + LIGF G+PWT+A+YM+ GG  K     +   Y + +A + LLD 
Sbjct: 125 MNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDK 184

Query: 184 LSDVSAEYLIAQIHAGVDVIQIFDTHAGCLGEHEFENYAARSVGRIISAVRRKYPNAK-F 242
           L+     YL AQI AG   + IFDT  G L   +++ ++   + +I+  + R+    +  
Sbjct: 185 LAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVP 244

Query: 243 ISFAKGAGYMLKNYRRLTDSNAIGLDWSVPLSFALELQKEG-PVQGNLDPMRLVVGNQVM 301
           ++     G         T  +A+GLDW+  ++ A         +QGN+DP  L      +
Sbjct: 245 VTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARI 304

Query: 302 IDGVNAILDVLGSGP-FIFNLGHGITPQVDPKNVLDLVKTVRS 343
            + V  IL   G G   +FNLGHGI   V P++    V+ V  
Sbjct: 305 EEEVATILAGFGHGEGHVFNLGHGIHQDVPPEHAGVFVEAVHR 347