HHsearch results for GI: 254780813 and protein with PDBid: 1b78_A
>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanocaldococcus jannaschii} SCOP: c.51.4.1 PDB: 2mjp_A*
Probab=90.57 E-value=0.49 Score=26.12 Aligned_cols=105 Identities=19% Similarity=0.103 Sum_probs=55.9
Q ss_pred CCCEEECCCCHHHHH----HHHHCC-CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 875474269989999----999789-885997589884324220134457998999888765433321013775403413
Q gi|254780813|r 2 IKNIILASSSLSRRK----LLQNSG-IQFSVVKPNIDEREMEKKMDFSERKRPEKIALILAEKKALEVSNRYPESFVIGC 76 (199)
Q Consensus 2 ~~~iILAS~S~~R~~----lL~~~g-i~f~~~~~~iDE~~~~~~~~~~~~~~p~~~~~~lA~~Ka~~v~~~~~~~~VI~a 76 (199)
|.+|++||.-+.... +|+.++ +......-++.|.. .+.. ..|..||+.+.+... ..+|+-
T Consensus 8 mMkI~~aT~N~~K~~E~~~lL~~l~~~~~~~~~~~~~E~~----------~t~~----enA~~Ka~~~~~~~~-~pvlaD 72 (193)
T 1b78_A 8 IMKIYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEIQ----------GTLE----EVAEFGAKWVYNILK-KPVIVE 72 (193)
T ss_dssp --CEEEECSCHHHHHHHHHHTTTCTTCCEEEECCCCCCBS----------SCHH----HHHHHHHHHHHHHHC-SCEEEE
T ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCC----------CCHH----HHHHHHHHHHHHCCC-CCEEEE
T ss_conf 4289998898789999999886678852000467888668----------8889----999998987553047-857885
Q ss_pred HHHHCCC---CC--CCCCC----CHHHHHHHHHHHHCCCCEEEEEEEEECCCCC
Q ss_conf 4431012---34--46761----0013469999985198037888665303786
Q gi|254780813|r 77 DQTMSLG---SS--IYHKP----VDMLEAEKNLLRISGKKHRISSAYVLVQNGK 121 (199)
Q Consensus 77 Dtvv~~~---g~--i~~KP----~~~~eA~~~L~~lsg~~h~v~T~~~i~~~~~ 121 (199)
||=+.++ |. ++.|. .+.+...+.|.....+..++.+.++++.+++
T Consensus 73 DSGL~v~aL~g~PGiys~~~~~~~~~~~~~~~l~~~~~r~a~f~~~~~~~~~~~ 126 (193)
T 1b78_A 73 DSGFFVEALNGFPGTYSKFVQETIGNEGILKLLEGKDNRNAYFKTVIGYCDENG 126 (193)
T ss_dssp EEEEEEGGGTTCEETTHHHHHHHTHHHHHHHHHTTCSCCEEEEEEEEEEEETTE
T ss_pred CCEEEEHHHCCCCCCEEHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCE
T ss_conf 367987542299850227756647869999874065236788988765411331