HHsearch alignment for GI: 254780814 and conserved domain: COG0323

>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair].
Probab=98.44  E-value=3.3e-06  Score=67.29  Aligned_cols=257  Identities=17%  Similarity=0.280  Sum_probs=130.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCC--EE
Q ss_conf             54456567555788686077975799983898--399997684453640777885001256425011323289860--48
Q gi|254780814|r   41 LHHMIYEVLDNAIDESLEGYADIITVTLNMDG--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSY--KV  116 (803)
Q Consensus        41 l~hlv~EiidNsvDe~~~g~~~~I~V~i~~dg--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~kfd~~~y--k~  116 (803)
T Consensus        24 PaSVVKELVENSlD---AG-At~I~I~ve~gG~~~I~V~DNG~Gi~~~Dl--------~l-a~~rHaTSKI~~~~DL~~I   90 (638)
T COG0323          24 PASVVKELVENSLD---AG-ATRIDIEVEGGGLKLIRVRDNGSGIDKEDL--------PL-ALLRHATSKIASLEDLFRI   90 (638)
T ss_pred             HHHHHHHHHHCCCC---CC-CCEEEEEEECCCEEEEEEEECCCCCCHHHH--------HH-HHHCCCCCCCCCHHHHHHH
T ss_conf             88999999861030---49-988999993598018999889999998999--------99-9865146457865568774


Q ss_pred             -ECCCCCCEEEEEEECCCEEEEEEEE-CCEEEEEEEECCEECCCCEEECCCCCCCCEEEEE----E--ECHHHH-HHHHC
Q ss_conf             -3116752037786326449999997-8959999988983646313873277888708999----8--778885-42100
Q gi|254780814|r  117 -SGGLHGVGVSVVNALSSWLKLRIKR-EGNIYEMSFINGILDNPLVVTGSAGNDTGTEVTF----L--PSSDIF-SVQDF  187 (803)
Q Consensus       117 -sgGlhGvG~s~vNalS~~~~v~v~r-dgk~~~q~f~~g~~~~~l~~~~~~~~~~GT~I~F----~--PD~~iF-~~~~~  187 (803)
T Consensus        91 ~TlGFRGEAL~SIasV-srlti~Srt~~~~~~~~~~~~g~~~~~--~~~p~a~~~GTtVeV~dLF~NtPaRrKflks~~~  167 (638)
T COG0323          91 RTLGFRGEALASIASV-SRLTITSRTAEASEGTQIYAEGGGMEV--TVKPAAHPVGTTVEVRDLFYNTPARRKFLKSEKT  167 (638)
T ss_pred             HCCCCCHHHHHHHHHH-HEEEEEECCCCCCCEEEEEECCCCCCC--CCCCCCCCCCCEEEEHHHHCCCHHHHHHHCCCHH
T ss_conf             3567338779998875-444899416776763899962884112--3347779999899845712558476654145389


Q ss_pred             CHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC-EEEECCCCC-CHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEE-
Q ss_conf             08999999997311464169999963586421-010012688-357765300356556885203642003699973345-
Q gi|254780814|r  188 NYDTLQHRLRELSFLNSSVQISLIDKRSPEPR-EITMFYKGG-IEAFVSYLDRHKKPLMQSPIRIQGSRDNISIDLAMR-  264 (803)
Q Consensus       188 ~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~-~~~f~~~~G-i~~fv~~l~~~~~~~~~~~i~~~~~~~~~~veval~-  264 (803)
T Consensus       168 E~~~i~~vv~r~ALahp~I~F~l~~~--gk~~~~~~~~~~~~~~~~ri~~i~G~--~~~~~~l~i~~~~~~~~l~G~v~~  243 (638)
T COG0323         168 EFGHITELINRYALAHPDISFSLSHN--GKLRIELLKLPGTGDLEERIAAVYGT--EFLKNALPIENEHEDLRLSGYVSL  243 (638)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEC--CEEEEEEEECCCCCCHHHHHHHHHCH--HHHHHHCCCCCCCCCEEEEEEEEC
T ss_conf             99999999999873079727999988--90414788657787578999998686--988752034567786699999825


Q ss_pred             --ECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCC
Q ss_conf             --317754121222246216667721035688899999999986242000123576134305721566652137633
Q gi|254780814|r  265 --WNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGFTSVLSIKMPDPRF  339 (803)
Q Consensus       265 --~~~~~~e~i~SfvN~I~T~~GGtHv~gf~~al~~~i~~y~~~~~~~Kk~k~~~~~~Diregl~~visvki~nP~F  339 (803)
T Consensus       244 P~~~r~~~~~q~~fVNgR~V~~~---------~l~~Ai~~aY~~--~L~~~----------r~P~~vL~l~l-~p~~  298 (638)
T COG0323         244 PEFTRASRDYQYLFVNGRPVRDK---------LLNHALREAYAD--YLPRG----------RYPVFVLFLEL-DPEL  298 (638)
T ss_pred             CEECCCCCCCEEEEECCCEECCH---------HHHHHHHHHHHH--CCCCC----------CCCEEEEEEEE-CHHH
T ss_conf             60135787744999889881158---------999999999861--06688----------87679999987-7123