HHsearch alignment for GI: 254780814 and conserved domain: COG2172
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].
Probab=90.99 E-value=1.3 Score=23.92 Aligned_cols=83 Identities=23% Similarity=0.256 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCC----CEEEEEECCCC-EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCE
Q ss_conf 544565675557886860779----75799983898-3999976844536407778850012564250113232898604
Q gi|254780814|r 41 LHHMIYEVLDNAIDESLEGYA----DIITVTLNMDG-SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYK 115 (803)
Q Consensus 41 l~hlv~EiidNsvDe~~~g~~----~~I~V~i~~dg-sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~kfd~~~yk 115 (803)
T Consensus 41 l~~av~E~~~N~v~Ha~~~~~~~g~I~i~~~~~~~~~~i~i~D~G~~~~~~----------~~~~~~~----------~~ 100 (146)
T COG2172 41 LAIAVSEALTNAVKHAYKLDPSEGEIRIEVSLDDGKLEIRIWDQGPGIEDL----------EESLGPG----------DT 100 (146)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCH----------HHHCCCC----------CC
T ss_conf 999999999899997630389986599999970993999999579898788----------8853888----------88
Q ss_pred EECCC--CCCEEEEEEECCCEEEEEEEECC
Q ss_conf 83116--75203778632644999999789
Q gi|254780814|r 116 VSGGL--HGVGVSVVNALSSWLKLRIKREG 143 (803)
Q Consensus 116 ~sgGl--hGvG~s~vNalS~~~~v~v~rdg 143 (803)
T Consensus 101 ~~~~~~~~G~Gl~l~~~~~D~~~~~~~~~~ 130 (146)
T COG2172 101 TAEGLQEGGLGLFLAKRLMDEFSYERSEDG 130 (146)
T ss_pred CCCCCCCCCCCHHHHHHHHEEEEEEEECCC
T ss_conf 887532473137888621107999960698