HHsearch alignment for GI: 254780814 and conserved domain: COG5000
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms].
Probab=90.80 E-value=0.46 Score=27.37 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=15.2
Q ss_pred CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 100001457765435468999999999999999
Q gi|254780814|r 569 SEEIELFCDSKGVISKNDLRNFIDDALKIDKLI 601 (803)
Q Consensus 569 ~~~~l~~~~~~~~l~ge~L~~li~~~~~~~~~l 601 (803)
T Consensus 545 deF~afARmP~p~~e~~dL~~ll~e~~~L~e~~ 577 (712)
T COG5000 545 DEFRAFARMPAPKLEKSDLRALLKEVSFLYEIG 577 (712)
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999987148998777422999999999999626