HHsearch results for GI: 254780814 and protein with PDBid: 1ei1_A

>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2
Probab=100.00  E-value=0  Score=956.13  Aligned_cols=390  Identities=57%  Similarity=0.931  Sum_probs=377.4

Q ss_pred             CCCCCHHHCEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCC
Q ss_conf             23678655123135420004587154327996325445656755578868607797579998389839999768445364
Q gi|254780814|r    7 NSSYDADSIQILKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTD   86 (803)
Q Consensus         7 ~~~Y~~~~i~~L~gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dgsisV~dnGrGIPv~   86 (803)
                      +++|||++|++|+||||||||||||||||+..+|||||+|||||||+||+++|||+.|+|+|+.||+|||+||||||||+
T Consensus         1 ~~~~d~~~i~~L~~lE~Vr~RP~mYiGs~~~~~Gl~~i~~Eil~Na~De~~~g~~~~I~V~i~~dgsisV~ddGrGIPv~   80 (391)
T 1ei1_A            1 SNSSDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTG   80 (391)
T ss_dssp             CCCCSGGGCEECCTTHHHHHCTHHHHCCSSSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTSCEEEEECSSCCCCS
T ss_pred             CCCCCHHHCEEECCCHHHHCCCCCEECCCCCCCCCEEEEEEEEECHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCC
T ss_conf             99789777846035227762998876468988722068888888432352149986799999279829999799867677


Q ss_pred             CCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCEECCCCEEECCCC
Q ss_conf             07778850012564250113232898604831167520377863264499999978959999988983646313873277
Q gi|254780814|r   87 LHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAG  166 (803)
Q Consensus        87 ~h~~~~~~~~E~i~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk~~~q~f~~g~~~~~l~~~~~~~  166 (803)
                      +||++++|+||||||+||||||||+++|++||||||||||||||||++|+|+++|+|+.|.|+|++|++..|++.++++ 
T Consensus        81 ~h~~~~~~~~Elif~~L~tg~nfd~~~~~~sgG~nGvGakl~NalS~~f~v~~~~~gk~~~q~f~~g~~~~~~~~~~~~-  159 (391)
T 1ei1_A           81 IHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET-  159 (391)
T ss_dssp             BCTTTSSBHHHHHHHSTTEESCSSSSSCSSCSCCSSCHHHHHHHTEEEEEEEEEETTEEEEEEEETTEESSCCEEEEEC-
T ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEECCEEEEEEECCEEEEEEEECCEECCCCEEECCC-
T ss_conf             7666685100899999713677799874331688765427999961555999996998999998099397884050575-


Q ss_pred             CCCCEEEEEEECHHHH-HHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCC
Q ss_conf             8887089998778885-421000899999999731146416999996358642101001268835776530035655688
Q gi|254780814|r  167 NDTGTEVTFLPSSDIF-SVQDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRHKKPLMQ  245 (803)
Q Consensus       167 ~~~GT~I~F~PD~~iF-~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~~~Gi~~fv~~l~~~~~~~~~  245 (803)
                      +++||+|+|+||+++| +...|++++|.+|++++|||+|||+|+|+|++.+  ++..|+|++||++|+++++.+..++++
T Consensus       160 ~~~gT~I~F~PD~~~F~~~~~~~~~~l~~r~~~~A~l~~gl~i~~~d~~~~--~~~~~~~~~gl~~~~~~l~~~~~~~~~  237 (391)
T 1ei1_A          160 EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLDSGVSIRLRDKRDG--KEDHFHYEGGIKAFVEYLNKNKTPIHP  237 (391)
T ss_dssp             SCCEEEEEEEECTTTCCSCCSCCHHHHHHHHHHHHHHSTTCEEEEEETTTC--CEEEECCCSHHHHHHHHHHHTSCBSSS
T ss_pred             CCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCC--CEEEEECCCCHHHHHHHHCCCCCCCCC
T ss_conf             789758999979788178655669999999999855089977999960478--268887076499999986258876799


Q ss_pred             CCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC
Q ss_conf             52036420036999733453177541212222462166677210356888999999999862420001235761343057
Q gi|254780814|r  246 SPIRIQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREG  325 (803)
Q Consensus       246 ~~i~~~~~~~~~~veval~~~~~~~e~i~SfvN~I~T~~GGtHv~gf~~al~~~i~~y~~~~~~~Kk~k~~~~~~Direg  325 (803)
                      +++++..+.+++.||||++|+++|+++++||||+|+|++|||||+||+.+|+++|++|+++.++.|+.+.+++++|||++
T Consensus       238 ~~~~~~~~~~~~~veva~~~~~~~~~~~~SfVN~I~T~~GGTHv~g~~~~l~~~i~~~~~k~~~~k~~~~~~~~~~Ik~~  317 (391)
T 1ei1_A          238 NIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREG  317 (391)
T ss_dssp             CCEEEEEEETTEEEEEEEEEBSSCCEEEEEEETTEECTTCBHHHHHHHHHHHHHHHHHHHHTTHHHHHCCCCCHHHHTTT
T ss_pred             CCEEEEEEECCEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHC
T ss_conf             76899976578289999984488836899986322489997979999999999999998775440123456888899709


Q ss_pred             CEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             21566652137633572100202611110321110268999987400357999877899988775545532110
Q gi|254780814|r  326 FTSVLSIKMPDPRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLDASMVRDAARRARDLT  399 (803)
Q Consensus       326 l~~visvki~nP~F~gQTK~kL~s~~v~~~v~~~v~~~l~~~l~~n~~~ak~i~~k~~~a~~ar~~a~kar~~~  399 (803)
                      |++||||+|+||+|+||||++|+|++++..|+..+.+.|..||++||..|+.|+++++++|+||++||||||+|
T Consensus       318 l~~~vs~~i~nP~F~sQTKekL~s~~~~~~v~~~v~~~l~~~l~~n~~~a~~I~~k~i~~a~ar~~a~karelt  391 (391)
T 1ei1_A          318 LIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT  391 (391)
T ss_dssp             EEEEEEEECSSCCBSSTTCCSBCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             49999998589967782017636974787889999999999999797999999999999999999998877049