HHsearch results for GI: 254780814 and protein with PDBid: 1gkz_A

>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A*

Probab=96.72  E-value=0.0026  Score=43.19  Aligned_cols=64  Identities=17%  Similarity=0.140  Sum_probs=28.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCEEE-EECCCEEEEEECCCEEEEECHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHH
Q ss_conf             853289999999996307787489599-9438337887267179981457898999850011000014577654354689
Q gi|254780814|r  509 DGAHIRTLLLTFFFRQMPSLIHNGFLY-IIKPPLYGITRGKSLQYVKDEESLEDYLINQSLSEEIELFCDSKGVISKNDL  587 (803)
Q Consensus       509 DG~HI~~Llltff~~~~~~li~~g~~y-ia~ppl~~~~~~K~E~YikDD~EL~~~Ll~~gl~~~~l~~~~~~~~l~ge~L  587 (803)
                      |=.|+.-.|++++--=+.-..+.+--. ...||. .|....                  +-+...+...+.|..|..+.+
T Consensus       235 dp~~L~~il~NLL~NAikat~e~~~~~~~~~p~I-~v~i~~------------------~~~~v~I~I~D~G~GIp~e~l  295 (388)
T 1gkz_A          235 IPMPLDYILPELLKNAMRATMESHLDTPYNVPDV-VITIAN------------------NDVDLIIRISDRGGGIAHKDL  295 (388)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCE-EEEEEE------------------CSSEEEEEEECCSCCCCTTTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE-EEEEEE------------------CCCEEEEEEEECCCCCCHHHH
T ss_conf             8899999999999999999771675557778847-999971------------------588699999869998799999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780814|r  588 RNFI  591 (803)
Q Consensus       588 ~~li  591 (803)
                      .++.
T Consensus       296 ~~IF  299 (388)
T 1gkz_A          296 DRVM  299 (388)
T ss_dssp             TTTT
T ss_pred             HHHC
T ss_conf             8762