HHsearch results for GI: 254780814 and protein with PDBid: 1h7s_A
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=99.36 E-value=1.1e-11 Score=108.07 Aligned_cols=192 Identities=19% Similarity=0.224 Sum_probs=128.9
Q ss_pred CCCCCCCCCCCHHHCEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC--EEEEEE
Q ss_conf 987642236786551231354200045871543279963254456567555788686077975799983898--399997
Q gi|254780814|r 1 MSDNIQNSSYDADSIQILKGLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDG--SCTVSD 78 (803)
Q Consensus 1 m~~~~~~~~Y~~~~i~~L~gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dg--sisV~d 78 (803)
|-.......=.+.+|+.|..--.-+.+-|-.| +-+...|.|+|+||+| || |+.|.|.++.+| +|+|.|
T Consensus 1 ~~~~~~~~~~~~~~I~~L~~~~~~~i~s~~vi------~~~~svvkELieNSiD---A~-At~I~I~v~~~g~~~I~V~D 70 (365)
T 1h7s_A 1 MERAESSSTEPAKAIKPIDRKSVHQICSGQVV------LSLSTAVKELVENSLD---AG-ATNIDLKLKDYGVDLIEVSD 70 (365)
T ss_dssp ----------------------------CEEE------CCHHHHHHHHHHHHHH---TT-CSEEEEEEEGGGTSEEEEEE
T ss_pred CCCCCCCCCCCCCCCEECCHHHHHHHCCCCEE------CCHHHHHHHHHHHHHC---CC-CCEEEEEEECCCEEEEEEEE
T ss_conf 99888899999877761998999882897734------6888999999977872---89-88899999879843899998
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCCC---CCCCCCEEECCCCCCEEEEEEECCCEEEEEEEE-CCE-EEEEEEECC
Q ss_conf 684453640777885001256425011323---289860483116752037786326449999997-895-999998898
Q gi|254780814|r 79 NGRGIPTDLHKEEGISAAEVIMTRLHAGGK---FNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKR-EGN-IYEMSFING 153 (803)
Q Consensus 79 nGrGIPv~~h~~~~~~~~E~i~t~L~ag~k---fd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~r-dgk-~~~q~f~~g 153 (803)
||.|||-+-- +++... |+.+| |++-....|.|.+|.+.+...+.|. +++.+++ ++. .|...|.++
T Consensus 71 nG~Gi~~~dl--------~~~~~~-~~tsk~~~~~d~~~~~t~GfRGeaL~si~~~s~-~~i~S~~~~~~~~~~~~~~~~ 140 (365)
T 1h7s_A 71 NGCGVEEENF--------EGLTLK-HHTSKIQEFADLTQVETFGFRGEALSSLCALSD-VTISTCHASAKVGTRLMFDHN 140 (365)
T ss_dssp CSCCCCGGGS--------GGGGC-----------CCTTCSEEESSSSSHHHHHHHHSE-EEEEEECTTCSSCEEEEECTT
T ss_pred CCCCCCHHHH--------HHHHHH-HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-EEEEEECCCCCHHEEEEEECC
T ss_conf 9987598998--------645420-236776623365334557742278888886245-158884389743349998246
Q ss_pred EECCCCEEECCCCCCCCEEEEEE----ECHH---HH-HHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCC
Q ss_conf 36463138732778887089998----7788---85-421000899999999731146416999996358
Q gi|254780814|r 154 ILDNPLVVTGSAGNDTGTEVTFL----PSSD---IF-SVQDFNYDTLQHRLRELSFLNSSVQISLIDKRS 215 (803)
Q Consensus 154 ~~~~~l~~~~~~~~~~GT~I~F~----PD~~---iF-~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~ 215 (803)
.... ..++.+...||+|+.. .-|. .| ......+..+.+.++.+|..+|+++|.|.+...
T Consensus 141 ~~~~---~~~~~~~~~GTtV~v~~lF~n~PvRrk~~~k~~~~e~~~i~~~v~~~Al~~p~V~f~l~~~~~ 207 (365)
T 1h7s_A 141 GKII---QKTPYPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLG 207 (365)
T ss_dssp SCEE---EEEECCCCSEEEEEEESTTTTSHHHHHHHHHTHHHHHHHHHHHHHHHHHHCTTCEEEEEEECT
T ss_pred CCCC---CCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf 6532---235644678758999613357722433213520589999999876552227964799997367