HHsearch results for GI: 254780814 and protein with PDBid: 1th8_A
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=96.01 E-value=0.0046 Score=41.25 Aligned_cols=92 Identities=21% Similarity=0.321 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCC-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCE
Q ss_conf 25445656755578868607-797579998389-8--3999976844536407778850012564250113232898604
Q gi|254780814|r 40 GLHHMIYEVLDNAIDESLEG-YADIITVTLNMD-G--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYK 115 (803)
Q Consensus 40 Gl~hlv~EiidNsvDe~~~g-~~~~I~V~i~~d-g--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~kfd~~~yk 115 (803)
-+.-.|.|++.|||.-+..+ -...|.|++..+ + .|+|+|||+|||-.. .+|--+ |. .+
T Consensus 39 di~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~~~~~l~i~V~D~G~Gi~~~~----------~~~~~~-----~~---~~ 100 (145)
T 1th8_A 39 EIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIPDIE----------EARQPL-----FT---TK 100 (145)
T ss_dssp HHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEEETTEEEEEEEECSSCCSCHH----------HHTCCC------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCHH----------HCCCCC-----CC---CC
T ss_conf 9999999999999884348999908999999937899999996478958577----------537877-----54---46
Q ss_pred EECCCCCCEEEEEEECCCEEEEEEEEC-CEEEEEE
Q ss_conf 831167520377863264499999978-9599999
Q gi|254780814|r 116 VSGGLHGVGVSVVNALSSWLKLRIKRE-GNIYEMS 149 (803)
Q Consensus 116 ~sgGlhGvG~s~vNalS~~~~v~v~rd-gk~~~q~ 149 (803)
...+..|.|..++..+...+.++...+ |....++
T Consensus 101 ~~~~~~GlGL~ii~~l~d~i~i~s~~~~Gt~v~l~ 135 (145)
T 1th8_A 101 PELERSGMGFTIMENFMDEVIVESEVNKGTTVYLK 135 (145)
T ss_dssp ---CCCSCHHHHHHHHSSEEEEEEETTTEEEEEEE
T ss_pred CCCCCCCHHHHHHHHHCCEEEEEECCCCCEEEEEE
T ss_conf 79995736899999969999999839996999999