HHsearch results for GI: 254780814 and protein with PDBid: 1ysr_A
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A
Probab=95.25 E-value=0.019 Score=36.41 Aligned_cols=86 Identities=21% Similarity=0.462 Sum_probs=52.4
Q ss_pred CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEC
Q ss_conf 87154327996325445656755578868607797579998389-8--39999768445364077788500125642501
Q gi|254780814|r 28 PSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMD-G--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLH 104 (803)
Q Consensus 28 P~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~d-g--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ 104 (803)
+.+..| | ..-|++++.-+|+||+.-. -...|.|....+ + .|+|.|||.|||-+.. +-||....
T Consensus 37 ~~~v~~--d-~~~l~~vl~NLl~NAiky~---~~~~I~i~~~~~~~~v~i~V~D~G~GI~~~~~--------~~iF~~F~ 102 (150)
T 1ysr_A 37 TCIIVG--L-PAGLRLAVDNAIANAVKHG---GATLVQLSAVSSRAGVEIAIDDNGSGVPEGER--------QVVFERFS 102 (150)
T ss_dssp CCEEEE--C-HHHHHHHHHHHHHHHHHTT---CCSEEEEEEEEETTEEEEEEEESSSCCCGGGH--------HHHHTSCC
T ss_pred CCEEEE--C-HHHHHHHHHHHHHHHHHHC---CCCEEEEEEEEECCEEEEEEEECCCCCCHHHH--------HHHCCCCC
T ss_conf 968998--9-9999999999999999748---99789999998099999999984879798999--------98557634
Q ss_pred CCCCCCCCCCEEECCCCCCEEEEEEECCCE
Q ss_conf 132328986048311675203778632644
Q gi|254780814|r 105 AGGKFNQKSYKVSGGLHGVGVSVVNALSSW 134 (803)
Q Consensus 105 ag~kfd~~~yk~sgGlhGvG~s~vNalS~~ 134 (803)
.+. .. + .+| +|+|.++|..+-+.
T Consensus 103 r~~---~~--~-~~G-~GLGL~i~k~i~~~ 125 (150)
T 1ysr_A 103 RGS---TA--S-HSG-SGLGLALVAQQAQL 125 (150)
T ss_dssp ------------------CCCHHHHHHHHH
T ss_pred CCC---CC--C-CCC-CCHHHHHHHHHHHH
T ss_conf 179---99--9-896-07799999999998