HHsearch results for GI: 254780814 and protein with PDBid: 1ysr_A

>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A
Probab=95.25  E-value=0.019  Score=36.41  Aligned_cols=86  Identities=21%  Similarity=0.462  Sum_probs=52.4

Q ss_pred             CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEC
Q ss_conf             87154327996325445656755578868607797579998389-8--39999768445364077788500125642501
Q gi|254780814|r   28 PSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMD-G--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLH  104 (803)
Q Consensus        28 P~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~d-g--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~  104 (803)
                      +.+..|  | ..-|++++.-+|+||+.-.   -...|.|....+ +  .|+|.|||.|||-+..        +-||....
T Consensus        37 ~~~v~~--d-~~~l~~vl~NLl~NAiky~---~~~~I~i~~~~~~~~v~i~V~D~G~GI~~~~~--------~~iF~~F~  102 (150)
T 1ysr_A           37 TCIIVG--L-PAGLRLAVDNAIANAVKHG---GATLVQLSAVSSRAGVEIAIDDNGSGVPEGER--------QVVFERFS  102 (150)
T ss_dssp             CCEEEE--C-HHHHHHHHHHHHHHHHHTT---CCSEEEEEEEEETTEEEEEEEESSSCCCGGGH--------HHHHTSCC
T ss_pred             CCEEEE--C-HHHHHHHHHHHHHHHHHHC---CCCEEEEEEEEECCEEEEEEEECCCCCCHHHH--------HHHCCCCC
T ss_conf             968998--9-9999999999999999748---99789999998099999999984879798999--------98557634


Q ss_pred             CCCCCCCCCCEEECCCCCCEEEEEEECCCE
Q ss_conf             132328986048311675203778632644
Q gi|254780814|r  105 AGGKFNQKSYKVSGGLHGVGVSVVNALSSW  134 (803)
Q Consensus       105 ag~kfd~~~yk~sgGlhGvG~s~vNalS~~  134 (803)
                      .+.   ..  + .+| +|+|.++|..+-+.
T Consensus       103 r~~---~~--~-~~G-~GLGL~i~k~i~~~  125 (150)
T 1ysr_A          103 RGS---TA--S-HSG-SGLGLALVAQQAQL  125 (150)
T ss_dssp             ------------------CCCHHHHHHHHH
T ss_pred             CCC---CC--C-CCC-CCHHHHHHHHHHHH
T ss_conf             179---99--9-896-07799999999998