HHsearch results for GI: 254780814 and protein with PDBid: 1zxm_A
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=100.00 E-value=0 Score=809.73 Aligned_cols=361 Identities=19% Similarity=0.294 Sum_probs=318.1
Q ss_pred EECCCCCHHCCCCCCEECCCCC---------------------CCHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCC-
Q ss_conf 2313542000458715432799---------------------6325445656755578868607-7975799983898-
Q gi|254780814|r 16 QILKGLDAVKKRPSMYIGDTDG---------------------ESGLHHMIYEVLDNAIDESLEG-YADIITVTLNMDG- 72 (803)
Q Consensus 16 ~~L~gle~vrkRP~mYiG~t~~---------------------~~Gl~hlv~EiidNsvDe~~~g-~~~~I~V~i~~dg- 72 (803)
|+|++|||||+|||||||||+. ..||||||||||||||||++|| +|+.|+|+|+.|+
T Consensus 7 ~~l~~lEhVr~RPgMYIGst~~~~~~~~~~~~~~~~~~~~~~~~~GL~~l~~EildNavDe~~~g~~~~~I~V~i~~d~~ 86 (400)
T 1zxm_A 7 QKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDVGINYREVTFVPGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENN 86 (400)
T ss_dssp EECCHHHHHHHCCHHHHCCCSCEEEEEEEEETTTEEEEEEEEECHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTT
T ss_pred CCCCHHHHHHCCCCCEECCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEEEEEECHHHHHHHCCCCCEEEEEEECCCC
T ss_conf 75775779863999702777767653045427664012012268700589989999655488655798479999977999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEEC--CEEEEEEE
Q ss_conf 3999976844536407778850012564250113232898604831167520377863264499999978--95999998
Q gi|254780814|r 73 SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKRE--GNIYEMSF 150 (803)
Q Consensus 73 sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rd--gk~~~q~f 150 (803)
+|||+||||||||++||++++|+||+|||+||||||||+++|++||||||||+|||||||+||+|+++++ ++.|.|.|
T Consensus 87 sitV~DnGrGIPv~~h~~~~~~~~e~i~t~Lhaggkfd~~~yk~sgGlhGVG~svvNalS~~~~Vev~~~~~~~~~~q~~ 166 (400)
T 1zxm_A 87 LISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTW 166 (400)
T ss_dssp EEEEEEESSCCCCSEETTTTEEHHHHHHHSSSEESCCCGGGCCCCSCCSSCHHHHHHHTEEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHCCHHHEEEEEECCCEEEEEEEC
T ss_conf 89999899653200215667321024677841315668986236346445252555110341145566302305677510
Q ss_pred ECCEECCCCEEECCCCCCCCEEEEEEECHHHHHHHHCCHHH---HHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCC
Q ss_conf 89836463138732778887089998778885421000899---999999731146416999996358642101001268
Q gi|254780814|r 151 INGILDNPLVVTGSAGNDTGTEVTFLPSSDIFSVQDFNYDT---LQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKG 227 (803)
Q Consensus 151 ~~g~~~~~l~~~~~~~~~~GT~I~F~PD~~iF~~~~~~~d~---l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~~~ 227 (803)
.+|+...++..++.+.+++||+|+|+||++||+...|++++ +.+|++++|+|++|++|.++|++. +..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GT~I~F~PD~~iF~~~~~~~d~~~~l~~r~~~la~l~~~~~v~~~~~~~---------~~~ 237 (400)
T 1zxm_A 167 MDNMGRAGEMELKPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGSTKDVKVFLNGNKL---------PVK 237 (400)
T ss_dssp ETTTTEECCCEEEECCSCCEEEEEEEECGGGGTCSSCCHHHHHHHHHHHHHHHHHSSSCEEEETTEEC---------CCC
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCEEEEECCCCC---------CCC
T ss_conf 23566455444557789995799998574401445515899999887789862777741898157656---------566
Q ss_pred CCHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHC
Q ss_conf 83577653003565568852036420036999733453177541212222462166677210356888999999999862
Q gi|254780814|r 228 GIEAFVSYLDRHKKPLMQSPIRIQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKS 307 (803)
Q Consensus 228 Gi~~fv~~l~~~~~~~~~~~i~~~~~~~~~~veval~~~~~~~e~i~SfvN~I~T~~GGtHv~gf~~al~~~i~~y~~~~ 307 (803)
|+.+|++....+..+....++.+..+..+..||+|++|++++.+++ ||||+|+|++|||||+||++||++++++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eva~~~~~~~~~~i-SfvN~I~T~~GGTHv~g~~~al~~~i~~~~~~~ 316 (400)
T 1zxm_A 238 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQI-SFVNSIATSKGGRHVDYVADQIVTKLVDVVKKK 316 (400)
T ss_dssp SHHHHHHHHHTTCBCSSSSBCCCEEEEEETTEEEEEEECSSSCEEE-EEETTEECTTEEHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCC-EEECCEECCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7205224204332112476247876506852999998647665211-000340068997764368888998777788762
Q ss_pred CCCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42000123576134305721566652137633572100202611110321110268999987400357999877899988
Q gi|254780814|r 308 FGSKKDKRSVIGDDCREGFTSVLSIKMPDPRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLDASM 387 (803)
Q Consensus 308 ~~~Kk~k~~~~~~Diregl~~visvki~nP~F~gQTK~kL~s~~v~~~v~~~v~~~l~~~l~~n~~~ak~i~~k~~~a~~ 387 (803)
+ +.+.+++++||||||++||||+|+||||+||||+||+|++++..+...+.++|..++.. ..|+++++..++
T Consensus 317 ~---k~~~~i~~~Diregl~~visv~i~~PqFegQTK~kL~s~~~~~~~~~~l~~~fi~~~~~-----~~i~e~l~~~~~ 388 (400)
T 1zxm_A 317 N---KGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCQLSEKFIKAAIG-----CGIVESILNWVK 388 (400)
T ss_dssp C-------CCCHHHHHTTEEEEEEECCSSCCBSSTTCCEECCCGGGSSSCCCCCHHHHHHHTT-----C-----------
T ss_pred C---CCCCCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-----HHHHHHHHHHHH
T ss_conf 5---46687899999749799999983899457821077148631251431368999999888-----799999999999
Q ss_pred HHHHHHH
Q ss_conf 7755455
Q gi|254780814|r 388 VRDAARR 394 (803)
Q Consensus 388 ar~~a~k 394 (803)
+|++++.
T Consensus 389 ~k~~~~l 395 (400)
T 1zxm_A 389 FKAQVQL 395 (400)
T ss_dssp -------
T ss_pred HHHHHHH
T ss_conf 7588986