HHsearch results for GI: 254780814 and protein with PDBid: 2xkj_E
>2xkj_E Topoisomerase IV; type IIA topoisomerase; 2.20A {Acinetobacter baumannii} PDB: 2xkk_A*
Probab=100.00 E-value=0 Score=680.81 Aligned_cols=256 Identities=42% Similarity=0.692 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 77899988775545532110011001246766766665555555217999825575432233465443023300562033
Q gi|254780814|r 380 KKVLDASMVRDAARRARDLTRRKGVLDIASLPGKLADCSERDPKKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILN 459 (803)
Q Consensus 380 ~k~~~a~~ar~~a~kar~~~rrK~~~~~~~lpgKL~Dc~~k~~~~~eL~ivEGDSAggsak~gRdr~~qai~PLrGKilN 459 (803)
+.+++.|++|. |+ +..++||+++..++|||||+||+++++++|||||||||||+|||++||||+||||||||||+||
T Consensus 2 ~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~p~kl~d~~~~~~~~~~l~l~EGdSA~g~~~~~rd~~~~~v~plrGK~lN 78 (767)
T 2xkj_E 2 EMAISKAGRRL--KA-AKKVERKKIVSGPALPGKLADCVGQTREESELFIVEGDSAGGSAKQARDKNFQAIMPIRGKILN 78 (767)
T ss_dssp --------------------CCCCCSSSCSSTTTCBCCCC-CGGGCEEEEEEHHHHHHHHHHHSCTTTEEEEEESSCCCC
T ss_pred HHHHHHHHHHH--HH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH
T ss_conf 57999999999--98-8752155556679998644010789966678999777787602001068786788653774031
Q ss_pred HHHCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 44305876632366788887625787753321235673738998508888532899999999963077874895999438
Q gi|254780814|r 460 VERARFDKMLSSQEIGTLITALGTGIGQDSFDINKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPSLIHNGFLYIIKP 539 (803)
Q Consensus 460 v~~a~~~~i~~n~Ei~~l~~~lG~~~g~~~~~~~~lrY~kiiimtDaD~DG~HI~~Llltff~~~~~~li~~g~~yia~p 539 (803)
|++|+.++|++|+||++|++||||++|+ +|+++|||||||||||||||||||+||||||||+|||+||++||||+|+|
T Consensus 79 v~~~~~~~~~~N~ei~~l~~~lGl~~~~--~~~~~lrYg~i~imtD~D~DG~hI~~Lll~ff~~~~p~L~~~g~~~~~~t 156 (767)
T 2xkj_E 79 TWEVSSDEVLASQEVHDIAIAIGVDPGS--DDLSELRYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYVAMP 156 (767)
T ss_dssp CTTSCTTTGGGSHHHHHHHHHHTCCTTC--CCCTTCCCSEEEEECCSSHHHHHHHHHHHHHHHHHCHHHHHTTCEEEECC
T ss_pred HCCCCHHHHHHHHHHHHHHHHHCCCCCC--CCHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCHHHHCCCCEEEEEC
T ss_conf 3258888887269999999997899798--86212777847999789977037999999999987899754796589727
Q ss_pred CEEEEEECCCEEEEECHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 33788726717998145789899985001100001457765435468999999999999999864344579999988742
Q gi|254780814|r 540 PLYGITRGKSLQYVKDEESLEDYLINQSLSEEIELFCDSKGVISKNDLRNFIDDALKIDKLIKDFYPNHDKTFIEQAVIS 619 (803)
Q Consensus 540 pl~~~~~~K~E~YikDD~EL~~~Ll~~gl~~~~l~~~~~~~~l~ge~L~~li~~~~~~~~~l~~l~~~~~~~lle~l~~~ 619 (803)
|||||++||+..|+.|+.|+++++-+..
T Consensus 157 Pl~k~~~~~~~~~~~~~~e~~~~~~~~~---------------------------------------------------- 184 (767)
T 2xkj_E 157 PLFRIDIGKDVHYALDDEELETILKNVK---------------------------------------------------- 184 (767)
T ss_dssp CSEEEEETTEEEEESSHHHHHHHHHTCC----------------------------------------------------
T ss_pred CEEEEECCCEEEECCCHHHHHHHHHHHC----------------------------------------------------
T ss_conf 6799962986684477699999888723----------------------------------------------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 11351123577899999999887653100001100244567059999951853026646677416427899998888775
Q gi|254780814|r 620 GVFNCESDQEINVSLASKLANRLNFIAEKSEKSWHGSINNSDILVKRIARGVQEQFVLEGSSIFSFGSKYKRIFSNRIEE 699 (803)
Q Consensus 620 ~~l~~~~d~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~Gv~~~~~l~~~~~~s~~~~~~~~~~~~l~~ 699 (803)
T Consensus 185 -------------------------------------------------------------------------------- 184 (767)
T 2xkj_E 185 -------------------------------------------------------------------------------- 184 (767)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HCCCCEEEEECCCEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCCCCHHHCEEEEEEHHHHHHHHHHHH-
Q ss_conf 1145502765582587399899999999863067628603777788955722303896134021236798898887865-
Q gi|254780814|r 700 NYLTILSLICNGDKIKITGPCSLLDTIFSIGRKGISMQRYKGLGEMNASQLWETTLNPDTRSLLRVKITDASQADDLFS- 778 (803)
Q Consensus 700 ~~~~~~~l~~~~~~~~i~s~~el~~~i~~~gkKG~sIQRYKGLGEMNPeQLWETTMDP~tRtLLqV~IeDa~~Ad~iF~- 778 (803)
+.++.+||||||||||||+|||||||||++|+|.+|.++|+..+++.|.
T Consensus 185 ------------------------------~~~~~~i~~yKGLG~~~~~e~~e~~~~~~~~~l~~~~~~~~~~~~~~~~~ 234 (767)
T 2xkj_E 185 ------------------------------GNKNPQITRFKGLGEMNAIQLRETTMDPNTRRLVQLDLDDAHLTAGLLDK 234 (767)
T ss_dssp ------------------------------SSCCCEEEECCCGGGSCHHHHHHHHTCTTTCCEEEEECCSHHHHHHHHHH
T ss_pred ------------------------------CCCCCCCHHCCCCCCCCHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHH
T ss_conf ------------------------------79763200013201024699999722843468862356530557999999
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 641899876289988524412366
Q gi|254780814|r 779 RLMGDEVEPRREFIQENSLPSALD 802 (803)
Q Consensus 779 ~LMGD~VEPRReFIe~NAL~vNLD 802 (803)
.+||+.+++||+||++++-.+.+|
T Consensus 235 ~~~~~~~~~Rk~~l~~~~~~~~~d 258 (767)
T 2xkj_E 235 LLAKKRAADRKQWLEQKGNLADIT 258 (767)
T ss_dssp HHCGGGHHHHHHHHHHHGGGCC--
T ss_pred HHCCCCHHHHHHHHHHCCCCCCEE
T ss_conf 865897077999998467412110