HHsearch results for GI: 254780814 and protein with PDBid: 3cwv_A

>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, ATP-binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus dk 1622}
Probab=100.00  E-value=0  Score=802.56  Aligned_cols=348  Identities=23%  Similarity=0.395  Sum_probs=323.4

Q ss_pred             ECCC--CCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             3135--42000458715432799632544565675557886860779757999838983999976844536407778850
Q gi|254780814|r   17 ILKG--LDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTDLHKEEGIS   94 (803)
Q Consensus        17 ~L~g--le~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dgsisV~dnGrGIPv~~h~~~~~~   94 (803)
                      .|.|  |||||||||||||||+ ++|||||||||||||||||+||||+.|+|+|++||+|||+||||||||++|      
T Consensus         6 ~~~~~~lE~VrkRPgMYiGst~-~~gl~hlv~EivdNsvDEa~aG~~~~I~V~i~~Dg~IsV~dnGrGIPv~~~------   78 (369)
T 3cwv_A            6 HLPGGIVENVRKRPGMYCGDVG-EYGLHHLVYFLLDVAYEEARRGECRDVVLEVGGDGSIALFCTSRTVTAENL------   78 (369)
T ss_dssp             ---CCHHHHHHHSTHHHHSCSS-HHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCEEEEEEESSCCHHHH------
T ss_pred             CCCCCCCCCHHCCCCCEECCCC-CCCCEEEEEEEEECCHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEE------
T ss_conf             3788730100059987427899-986558998886532207644888779999999996999928999522077------


Q ss_pred             EEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCEECCCCEEECC-----CCCCC
Q ss_conf             0125642501132328986048311675203778632644999999789599999889836463138732-----77888
Q gi|254780814|r   95 AAEVIMTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGS-----AGNDT  169 (803)
Q Consensus        95 ~~E~i~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk~~~q~f~~g~~~~~l~~~~~-----~~~~~  169 (803)
                            ++|||||||+++.|+++||+||+| |||||||++|+|+|+|+|+.|.|+|++|++..+.+.+..     +..++
T Consensus        79 ------~~l~~g~~f~~~~~~~~gG~~Gg~-svvNalS~~~~Vev~r~~~~~~~~f~~g~~~~~~~~~~~~k~~~~~~~~  151 (369)
T 3cwv_A           79 ------VRVATGAGFLGRPPGDGWGWDSML-VVSLALSSRYQVDIWADGRQWRVMGEHGHPQGEGAAVTPMEPMPVSAER  151 (369)
T ss_dssp             ------HHHHTTTTGGGSSCCCSTTTTSSH-HHHHHTEEEEEEEEEETTEEEEEEEETTEECTTCEEESSCCCCSSCCSE
T ss_pred             ------EEEEECCCCCCCCCCCCCCCCCEE-EEEEEEEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCEECCCCCCC
T ss_conf             ------887410233687776653466539-9999982089999997997999988857254788351440352676689


Q ss_pred             CEEEEEEECHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCEE
Q ss_conf             70899987788854210008999999997311464169999963586421010012688357765300356556885203
Q gi|254780814|r  170 GTEVTFLPSSDIFSVQDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMFYKGGIEAFVSYLDRHKKPLMQSPIR  249 (803)
Q Consensus       170 GT~I~F~PD~~iF~~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~~~~Gi~~fv~~l~~~~~~~~~~~i~  249 (803)
                      ||+|+|+||+++|++..|+++.+..|++++||||+||++.|.|++.+  +...|+|++|+++|++|++.+..++++++++
T Consensus       152 gT~i~F~pD~~iF~~~~~~~~~i~~~lr~~a~l~~gl~i~l~~~~~~--~~~~~~~~~g~~~fv~~l~~~~~~l~~~~~~  229 (369)
T 3cwv_A          152 GVRVHFVPDATIFEVLAFDRARLSRRCNELAALAPGLRVSFADLQRG--ERTLWHLPGGVAQWAHVLTEARPQLHPEPVV  229 (369)
T ss_dssp             EEEEEEEECTTTCSCCCCCHHHHHHHHHHHHHHSTTCEEEEEETTTT--EEEEEECTTHHHHHHHHHHTTSCBSSSSCEE
T ss_pred             CCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCEEEEECCC--CEEEEEECCCHHHHHHHHHCCCCCCCCCCEE
T ss_conf             97899966635544226527888644200443069960002584079--4468973574788999875146623547789


Q ss_pred             EEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEE
Q ss_conf             64200369997334531775412122224621666772103568889999999998624200012357613430572156
Q gi|254780814|r  250 IQGSRDNISIDLAMRWNDGYHENVLCFTNNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGFTSV  329 (803)
Q Consensus       250 ~~~~~~~~~veval~~~~~~~e~i~SfvN~I~T~~GGtHv~gf~~al~~~i~~y~~~~~~~Kk~k~~~~~~Diregl~~v  329 (803)
                      ++++.+++.||||++|++++.++++||||+|+|++|||||+||++||+++|++|++      +.+.+++++||||||+||
T Consensus       230 ~~~~~~~~~vEval~~~~~~~~~~~SFVN~I~T~~GGTHv~g~~~~l~k~i~~~~k------k~k~~i~~~dIregL~~v  303 (369)
T 3cwv_A          230 FDFTWDGLRVQCALQWCEDEDSTLLSFANAVRTVRHGAHVKGVTQALRGALAKLSG------ETRGAFPWARVAQGLTAI  303 (369)
T ss_dssp             EEEEETTEEEEEEEEEBSSSCCEEEEEETTEECTTCBHHHHHHHHHHHHHHHHHHT------CCGGGSCHHHHTTTEEEE
T ss_pred             EEEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH------HCCCCCCHHHHHCCCEEE
T ss_conf             99776655389999974888623786347874899988688699999999998743------111358788875287899


Q ss_pred             EEEECC--CCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             665213--763357210020261111032111026899998740035799987789998
Q gi|254780814|r  330 LSIKMP--DPRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLDAS  386 (803)
Q Consensus       330 isvki~--nP~F~gQTK~kL~s~~v~~~v~~~v~~~l~~~l~~n~~~ak~i~~k~~~a~  386 (803)
                      |||+++  ||+|+||||+||+||+|+++|++++.+.|..||++||..|+.|++|++.|.
T Consensus       304 isV~~~~~nP~FegQTKekL~~~~v~~~v~~~v~~~l~~~l~~np~~a~~i~~k~~~~~  362 (369)
T 3cwv_A          304 VAVSGPRRQMAFAGPTKELLAIPGLEEAIRKQLQPLFIELLREHPVTPALLARRTSGSE  362 (369)
T ss_dssp             EEEECCGGGCCBSSTTCCSBCCTTHHHHHHHHHHHHHHHHHHTCTTHHHHHTTC-----
T ss_pred             EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
T ss_conf             99987898998078474761698799999999999999999979899999999998666