HHsearch results for GI: 254780814 and protein with PDBid: 3g7e_A
>3g7e_A DNA gyrase subunit B; isomerase; HET: DNA B46; 2.20A {Escherichia coli} PDB: 1kzn_A* 1aj6_A*
Probab=100.00 E-value=0 Score=521.27 Aligned_cols=202 Identities=61% Similarity=0.944 Sum_probs=192.0
Q ss_pred CCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 54200045871543279963254456567555788686077975799983898399997684453640777885001256
Q gi|254780814|r 20 GLDAVKKRPSMYIGDTDGESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTDLHKEEGISAAEVI 99 (803)
Q Consensus 20 gle~vrkRP~mYiG~t~~~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dgsisV~dnGrGIPv~~h~~~~~~~~E~i 99 (803)
||||||||||||||||+..+|||||+|||||||+||+++|+|+.|.|+++.||+|||+||||||||++||++++|+||+|
T Consensus 1 glEhVr~RP~mYiGs~~~~~gl~~i~~Eil~NavDe~~~~~~~~i~v~i~~dg~isV~ddG~GIPv~~h~~~~~~~~eli 80 (203)
T 3g7e_A 1 GLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVI 80 (203)
T ss_dssp CHHHHHHSGGGTTCCSSSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTSCEEEEECSSCCCCSCCTTTCCCHHHHH
T ss_pred CCHHHHCCCCCEECCCCCCCCCEEEEEEEEEEHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEE
T ss_conf 95567408988881378887274899988883445631599976899996799799998997745644576698220689
Q ss_pred EEEECCCCCCCCCCCEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEEEECCEECCCCEEECCCCCCCCEEEEEEECH
Q ss_conf 42501132328986048311675203778632644999999789599999889836463138732778887089998778
Q gi|254780814|r 100 MTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFINGILDNPLVVTGSAGNDTGTEVTFLPSS 179 (803)
Q Consensus 100 ~t~L~ag~kfd~~~yk~sgGlhGvG~s~vNalS~~~~v~v~rdgk~~~q~f~~g~~~~~l~~~~~~~~~~GT~I~F~PD~ 179 (803)
||+||||+|||+++|++|||+||||+|||||||+||+|+++|+|+.|.|+|++|++..|++.++++ +++||+|+|+||+
T Consensus 81 f~~l~tg~nyd~~~~~~~gG~nG~G~kl~N~~S~~f~v~~~~~gk~~~q~f~~g~~~~~~~~~~~~-~~~gT~V~F~PD~ 159 (203)
T 3g7e_A 81 MTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET-EKTGTMVRFWPSL 159 (203)
T ss_dssp HHSTTCCSEECTTCCEESCCCCSSCHHHHHHTEEEEEEEEEETTEEEEEEEETTEESSCCEEEEEC-SCCEEEEEEEECT
T ss_pred EEEEEECCCCCCCCCEECCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEEECCCEECCCCEECCCC-CCCCEEEEEEECC
T ss_conf 989840477888861311675786728989862189999998999999998499298882352576-8998899999793
Q ss_pred HHHHH-HHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEC
Q ss_conf 88542-1000899999999731146416999996358642101001
Q gi|254780814|r 180 DIFSV-QDFNYDTLQHRLRELSFLNSSVQISLIDKRSPEPREITMF 224 (803)
Q Consensus 180 ~iF~~-~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der~~~~~~~~f~ 224 (803)
++|.. ..|++++|.+|++++|||||||+|+|+|||.+ ++..||
T Consensus 160 ~~F~~~~~~~~~~l~~r~~~~A~l~~gl~v~~nder~~--~e~~fh 203 (203)
T 3g7e_A 160 ETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDG--KEDHFH 203 (203)
T ss_dssp TTCCSCCSCCHHHHHHHHHHHHHHSTTCEEEEEETTTC--CEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCC--CCEEEC
T ss_conf 10267541479999999999813589858999964789--733529