HHsearch results for GI: 254780814 and protein with PDBid: 3h4l_A

>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=99.52  E-value=4.8e-12  Score=110.97  Aligned_cols=160  Identities=19%  Similarity=0.245  Sum_probs=112.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCC---CCCC
Q ss_conf             63254456567555788686077975799983898--399997684453640777885001256425011323---2898
Q gi|254780814|r   38 ESGLHHMIYEVLDNAIDESLEGYADIITVTLNMDG--SCTVSDNGRGIPTDLHKEEGISAAEVIMTRLHAGGK---FNQK  112 (803)
Q Consensus        38 ~~Gl~hlv~EiidNsvDe~~~g~~~~I~V~i~~dg--sisV~dnGrGIPv~~h~~~~~~~~E~i~t~L~ag~k---fd~~  112 (803)
                      ...+...|.|+|+||+|   || |+.|.|.|...|  +|.|.|||.|||.+--        ++++.. |+-+|   |+|-
T Consensus        23 I~~p~svvkELveNsiD---A~-At~I~v~i~~~g~~~i~V~DnG~Gi~~~d~--------~~~~~r-~~TSK~~~~~dl   89 (367)
T 3h4l_A           23 ITDLTTAVKELVDNSID---AN-ANQIEIIFKDYGLESIECSDNGDGIDPSNY--------EFLALK-HYTSKIAKFQDV   89 (367)
T ss_dssp             CCSHHHHHHHHHHHHHH---TT-CSEEEEEEETTTTSEEEEEECSCCCCGGGT--------TTTTCC-EEC---------
T ss_pred             ECCHHHHHHHHHHHHHC---CC-CCEEEEEEECCCEEEEEEEECCCCCCHHHH--------HHHHHH-CCCCCCCCCCCC
T ss_conf             46889999999977764---89-598999998798469999989998897899--------876542-058755532233


Q ss_pred             CCEEECCCCCCEEEEEEECCCEEEEEEE-ECCEEEEEEEECCEECCCCEEECCCCCCCCEEEEEE----ECHHH---H-H
Q ss_conf             6048311675203778632644999999-789599999889836463138732778887089998----77888---5-4
Q gi|254780814|r  113 SYKVSGGLHGVGVSVVNALSSWLKLRIK-REGNIYEMSFINGILDNPLVVTGSAGNDTGTEVTFL----PSSDI---F-S  183 (803)
Q Consensus       113 ~yk~sgGlhGvG~s~vNalS~~~~v~v~-rdgk~~~q~f~~g~~~~~l~~~~~~~~~~GT~I~F~----PD~~i---F-~  183 (803)
                      ..--|.|..|.+.+...+.|+ +++..+ ++...+...|..+......+   .+....||+|+..    .-|.+   | .
T Consensus        90 ~~~~t~GfRGeAL~sI~~vs~-l~I~S~~~~~~~~~~~~~~~g~~~~~~---~~~~~~GTtV~V~dLF~n~PvRrk~~~k  165 (367)
T 3h4l_A           90 AKVQTLGFRGEALSSLCGIAK-LSVITTTSPPKADKLEYDMVGHITSKT---TTSRNKGTTVLVSQLFHNLPVRQKEFSK  165 (367)
T ss_dssp             CCCCEEEETTHHHHHHHHSSE-EEEEEESSTTCEEEEEECTTCCEEEEE---EECCSSEEEEEEESTTTTCHHHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHHCC-EEEEEEECCCCCCEEEEEECCCCCCCC---CCCCCCCCCEEEECCCCCCHHHHHHHHC
T ss_conf             112466644078998875256-479985058763349998337522235---4345666634632030587677887650


Q ss_pred             HHHCCHHHHHHHHHHHHCCCCEEEEEEEECC
Q ss_conf             2100089999999973114641699999635
Q gi|254780814|r  184 VQDFNYDTLQHRLRELSFLNSSVQISLIDKR  214 (803)
Q Consensus       184 ~~~~~~d~l~~R~~~~A~Ln~gl~i~l~Der  214 (803)
                      ...-.+..+.+.++.+|..+|++++.+.+..
T Consensus       166 ~~~~e~~~I~~~v~~yAL~~p~V~F~l~~~~  196 (367)
T 3h4l_A          166 TFKRQFTKCLTVIQGYAIINAAIKFSVWNIT  196 (367)
T ss_dssp             THHHHHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf             1026777778898644324797069998633