RPSBLAST alignment for GI: 254780814 and conserved domain: smart00433
>gnl|CDD|128710 smart00433, TOP2c, TopoisomeraseII. Eukaryotic DNA topoisomerase II, GyrB, ParE. Length = 594
Score = 675 bits (1745), Expect = 0.0
Identities = 283/527 (53%), Positives = 371/527 (70%), Gaps = 12/527 (2%)
Query: 40 GLHHMIYEVLDNAIDESLEGYADIITVTLNMDGSCTVSDNGRGIPTDLHKEEGISAAEVI 99
GLHH++ E++DNA DE+L GY D I VT++ D S +V DNGRGIP ++H +E A EVI
Sbjct: 1 GLHHLVDEIVDNAADEALAGYMDTIKVTIDKDNSISVEDNGRGIPVEIHPKEKKYAPEVI 60
Query: 100 MTRLHAGGKFNQKSYKVSGGLHGVGVSVVNALSSWLKLRIKREGNIYEMSFI-NGILDNP 158
T LHAGGKF+ +YKVSGGLHGVG SVVNALS+ ++ + R+G Y+ SF NG +
Sbjct: 61 FTVLHAGGKFDDDAYKVSGGLHGVGASVVNALSTEFEVEVARDGKEYKQSFSNNGKPLSE 120
Query: 159 LVVTGSAGNDTGTEVTFLPSSDIFSV-QDFNYDTLQHRLRELSFLNSSVQISLIDKRSPE 217
+ G GT+VTF P +IF + D +++ L+ RLREL+FLN V+I+L D+RS E
Sbjct: 121 PKIIGDTK-KDGTKVTFKPDLEIFGMTTDDDFELLKRRLRELAFLNKGVKITLNDERSDE 179
Query: 218 PREITMFYKGGIEAFVSYLDRHKKPLMQSPIRIQGSRDNISIDLAMRWNDGYHENVLCFT 277
++GGI+ +V L+++K+ L P I+G +DNI +++A ++ DGY EN++ F
Sbjct: 180 EETF--LFEGGIKDYVELLNKNKELLSPEPTYIEGEKDNIRVEVAFQYTDGYSENIVSFV 237
Query: 278 NNIPQKDGGTHLSGLRSALTRQITSYVEKSFGSKKDKRSVI-GDDCREGFTSVLSIKMPD 336
NNI +GGTH +G + ALTR I Y +K KK K I G+D REG T+ +S+K+P+
Sbjct: 238 NNIATTEGGTHENGFKDALTRVINEYAKK---KKKLKEKNIKGEDVREGLTAFISVKIPE 294
Query: 337 PRFSSQTKEKLVSSEVRSVVESFVNDGLSAWLEEHPLEAKIIVKKVLDASMVRDAARRAR 396
P+F QTKEKL +SEVR VE V++ L ++LEE+P+EA IV+KVL A+ R AA++AR
Sbjct: 295 PQFEGQTKEKLGTSEVRFGVEKIVSECLLSFLEENPVEASKIVEKVLLAAKARAAAKKAR 354
Query: 397 DLTRRKGVLDIASLPGKLADCSERDPKKSELFLVEGDSAGGSAKQGRSRENQAILPLRGK 456
+LTR+K L SLPGKLAD S PKK ELFLVEGDSAGGSAK GR R+ QAILPLRGK
Sbjct: 355 ELTRKKK-LSKISLPGKLADASSAGPKKCELFLVEGDSAGGSAKSGRDRDFQAILPLRGK 413
Query: 457 ILNVERARFDKMLSSQEIGTLITALGTGIGQDSFDINKLRYHKIIIMTDADVDGAHIRTL 516
+LNVE+A DK+L ++EI LITALG GIG+D FDI KLRY KIIIMTDADVDG+HI+ L
Sbjct: 414 LLNVEKASLDKILKNEEIQALITALGLGIGKD-FDIEKLRYGKIIIMTDADVDGSHIKGL 472
Query: 517 LLTFFFRQMPSLIHNGFLYIIKPPLYGITRGKSLQYVKDEESLEDYL 563
LLTFF+R MP LI GF+YI PPLY +T+GK SL++Y
Sbjct: 473 LLTFFYRYMPPLIEAGFVYIAIPPLYKVTKGKKKYVYSF-YSLDEYE 518